Pregenerated sensors for TGFBR3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029287Ensembl transcript IDs: ENSMUST00000031224.15, ENSMUST00000136882.2
Found 274 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGAGTCTGGACACCCAGCATCGGCATCTGGCCCTGCCCCGGCGGTaGCAGGCATCCGTCTGTCCACCTAGGCAGCGGCGTCCATCTGTC | + |
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Preference number: 1 (lower is better) Translates to: LSLDTQHRHLALPRR*QASVCPPRQRRPSV Trigger: GACAGATGGACGCCGCTGCCTAGGTGGACAGACGGATGCCTGCCACCGCCGGGGCAGGGCCAGATGCCGATGCTGGGTGTCCAGACTCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| 3UTR CCA 90 bp | CAGGCCCCCAAGGCTAGCAAGCTACACAGGGGACCATGTAGGGCGTaGCAGGTCAGGAGTGGGCATCCAGAGCGAGATGCAGATTGGCTA | + |
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Preference number: 1 (lower is better) Translates to: QAPKASKLHRGPCRA*QVRSGHPERDADWL Trigger: TAGCCAATCTGCATCTCGCTCTGGATGCCCACTCCTGACCTGCCACGCCCTACATGGTCCCCTGTGTAGCTTGCTAGCCTTGGGGGCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| 3UTR TCA 90 bp | TCCTGCGAGGGGCTGGCGGGGAAGGCCACCAGCTTAGCTTTCGTGTaGCAGATGTCCAGGGTCACATTTACGTGGGCCGTGGTAAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: SCEGLAGKATSLAFV*QMSRVTFTWAVVRK Trigger: CTTCCTTACCACGGCCCACGTAAATGTGACCCTGGACATCTGTCACACGAAAGCTAAGCTGGTGGCCTTCCCCGCCAGCCCCTCGCAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| 3UTR TCA 90 bp | ACTGAAATTCACTCTCTCTTTACAGGGAACCCAGATCAAGCCTTCTaGGTCTGGACACCCAGCATCGGCATCTGGCCCTGCCCCGGCGGT | + |
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Preference number: 1 (lower is better) Translates to: TEIHSLFTGNPDQAF*VWTPSIGIWPCPGG Trigger: ACCGCCGGGGCAGGGCCAGATGCCGATGCTGGGTGTCCAGACTCAGAAGGCTTGATCTGGGTTCCCTGTAAAGAGAGAGTGAATTTCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| 3UTR GCA 90 bp | AAAAGACAGGCACGCGCCTGCGCACCCCACACACTCAGGCAAGCCTaGGGAGAACACACGCAGGAAATGGATTTACAATCTCATTACCAG | + |
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Preference number: 1 (lower is better) Translates to: KRQARACAPHTLRQA*GEHTQEMDLQSHYQ Trigger: CTGGTAATGAGATTGTAAATCCATTTCCTGCGTGTGTTCTCCGCAGGCTTGCCTGAGTGTGTGGGGTGCGCAGGCGCGTGCCTGTCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| 3UTR GCA 90 bp | CAGCATCAACAAGACAAAATGGCCCCTGTGGCCACTGGTGTGGCCTaGAGACACAACACAAGACTTTGCAGGTGGAAATGGGTTCAGCCA | + |
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Preference number: 1 (lower is better) Translates to: QHQQDKMAPVATGVA*RHNTRLCRWKWVQP Trigger: TGGCTGAACCCATTTCCACCTGCAAAGTCTTGTGTTGTGTCTGCAGGCCACACCAGTGGCCACAGGGGCCATTTTGTCTTGTTGATGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| 3UTR CCA 90 bp | AGGGCGTGGCAGGTCAGGAGTGGGCATCCAGAGCGAGATGCAGATTaGCTATGGAGGGAGCATTTCTCCTATTTTACATCTTGGTTCAGC | + |
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Preference number: 1 (lower is better) Translates to: RAWQVRSGHPERDAD*LWREHFSYFTSWFS Trigger: GCTGAACCAAGATGTAAAATAGGAGAAATGCTCCCTCCATAGCCAATCTGCATCTCGCTCTGGATGCCCACTCCTGACCTGCCACGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| 3UTR CCA 90 bp | GGTTTCAGCATCAACAAGACAAAATGGCCCCTGTGGCCACTGGTGTaGCCTGCAGACACAACACAAGACTTTGCAGGTGGAAATGGGTTC | + |
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Preference number: 1 (lower is better) Translates to: GFSINKTKWPLWPLV*PADTTQDFAGGNGF Trigger: GAACCCATTTCCACCTGCAAAGTCTTGTGTTGTGTCTGCAGGCCACACCAGTGGCCACAGGGGCCATTTTGTCTTGTTGATGCTGAAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| 3UTR CCA 90 bp | CAGATGTCCAGGGTCACATTTACGTGGGCCGTGGTAAGGAAGGGGTaGGTAGAGCAGGCTGTCTGTATACTGAAATTCACTCTCTCTTTA | + |
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Preference number: 1 (lower is better) Translates to: QMSRVTFTWAVVRKG*VEQAVCILKFTLSL Trigger: TAAAGAGAGAGTGAATTTCAGTATACAGACAGCCTGCTCTACCCACCCCTTCCTTACCACGGCCCACGTAAATGTGACCCTGGACATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| 3UTR CCA 90 bp | TCCATCAGCAACGCTTCAACGTTGACGTTTTCATTCATGAAGGTCTaGGCACAACTGCCTGACTGTAAAGGCAGTGGGCTTTGCTCATGG | + |
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Preference number: 1 (lower is better) Translates to: SISNASTLTFSFMKV*AQLPDCKGSGLCSW Trigger: CCATGAGCAAAGCCCACTGCCTTTACAGTCAGGCAGTTGTGCCCAGACCTTCATGAATGAAAACGTCAACGTTGAAGCGTTGCTGATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| 3UTR TCA 90 bp | TGTGCTCTGTTAATACAACCAGCAGTACGCTCATCATTCAAACCATaGGGTAGTTACAGTACAAAAAGACAGGCACGCGCCTGCGCACCC | + |
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Preference number: 1 (lower is better) Translates to: CALLIQPAVRSSFKP*GSYSTKRQARACAP Trigger: GGGTGCGCAGGCGCGTGCCTGTCTTTTTGTACTGTAACTACCTCATGGTTTGAATGATGAGCGTACTGCTGGTTGTATTAACAGAGCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| 3UTR CCA 90 bp | GTGGCCACTGGTGTGGCCTGCAGACACAACACAAGACTTTGCAGGTaGAAATGGGTTCAGCCAGACTATAACAACAGTCTTAAGGAAACT | + |
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Preference number: 1 (lower is better) Translates to: VATGVACRHNTRLCR*KWVQPDYNNSLKET Trigger: AGTTTCCTTAAGACTGTTGTTATAGTCTGGCTGAACCCATTTCCACCTGCAAAGTCTTGTGTTGTGTCTGCAGGCCACACCAGTGGCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| 3UTR CCA 90 bp | ATTCTCTTCCTTTTGCTTATTATATCACCTGTCCAACAAAAACTCTaGTGTCTATTGTGTGGCGGGTGCCCTGTGTGGCCCAGATGCACC | + |
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Preference number: 1 (lower is better) Translates to: ILFLLLIISPVQQKL*CLLCGGCPVWPRCT Trigger: GGTGCATCTGGGCCACACAGGGCACCCGCCACACAATAGACACCAGAGTTTTTGTTGGACAGGTGATATAATAAGCAAAAGGAAGAGAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136882.2 |
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| 3UTR TCA 90 bp | TGGTCGTCTCTCCAATGTGCTGGGTGTTCTGCATTTGTGCCTATATaGCCATACACAGGCATTACCTTGCTAATAATCCCTTCGCTTACC | + |
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Preference number: 1 (lower is better) Translates to: WSSLQCAGCSAFVPI*PYTGITLLIIPSLT Trigger: GGTAAGCGAAGGGATTATTAGCAAGGTAATGCCTGTGTATGGTCATATAGGCACAAATGCAGAACACCCAGCACATTGGAGAGACGACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| 3UTR CCA 90 bp | ACTGGTGTGGCCTGCAGACACAACACAAGACTTTGCAGGTGGAAATaGGTTCAGCCAGACTATAACAACAGTCTTAAGGAAACTTGTAGA | + |
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Preference number: 1 (lower is better) Translates to: TGVACRHNTRLCRWK*VQPDYNNSLKETCR Trigger: TCTACAAGTTTCCTTAAGACTGTTGTTATAGTCTGGCTGAACCCATTTCCACCTGCAAAGTCTTGTGTTGTGTCTGCAGGCCACACCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| 3UTR TCA 90 bp | AAAGTATTTCAATGTATCTATGCATCGGTTGGAGACCCTCAGCCCTaGAGAAATCTGCTTTGGTTCAAATTTTCCCAATTGAATAGAAGC | + |
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Preference number: 1 (lower is better) Translates to: KVFQCIYASVGDPQP*RNLLWFKFSQLNRS Trigger: GCTTCTATTCAATTGGGAAAATTTGAACCAAAGCAGATTTCTTCAGGGCTGAGGGTCTCCAACCGATGCATAGATACATTGAAATACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| 3UTR-3UTR CCA 90 bp | GAACACACGCAGGAAATGGATTTACAATCTCATTACCAGACAAGCAAAAGGCCAGCCCTGCCCCGGCGGTaGCAGGCATCCGTCTGTCCA | + |
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Preference number: 2 (lower is better) Translates to: EHTQEMDLQSHYQTSKRPALPRR*QASVCP Trigger: TGGACAGACGGATGCCTGCCACCGCCGGGGCAGGGC...TGGCCTTTTGCTTGTCTGGTAATGAGATTGTAAATCCATTTCCTGCGTGTGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| 3UTR-3UTR CCA 90 bp | CGTGGCAGGTCAGGAGTGGGCATCCAGAGCGAGATGCAGATTGGCTATGGAGGGCAAATGATGGATGTTTaGACACCTGGACAAAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: RGRSGVGIQSEMQIGYGGQMMDV*TPGQSS Trigger: GCTGCTTTGTCCAGGTGTCCAAACATCCATCATTTG...CCCTCCATAGCCAATCTGCATCTCGCTCTGGATGCCCACTCCTGACCTGCCACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| 3UTR-3UTR GCA 90 bp | TCTAAGCAGGTTCACAAAGACCATGGAACAGAGGGAAGGTTACAGCAGGGGTGTACACTCAGGCAAGCCTaGGGAGAACACACGCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: SKQVHKDHGTEGRLQQGCTLRQA*GEHTQE Trigger: TTCCTGCGTGTGTTCTCCGCAGGCTTGCCTGAGTGT...ACACCCCTGCTGTAACCTTCCCTCTGTTCCATGGTCTTTGTGAACCTGCTTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| 3UTR CAA 90 bp | TGGAGTTGGTGTGCTTGTGCGGAGTATCAGGAGTCAGCATTCATTTaGGCCCAAGAGAGGAATGTTACTTTGGCAAGTGACAGGCCCCCA | + |
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Preference number: 2 (lower is better) Translates to: WSWCACAEYQESAFI*AQERNVTLASDRPP Trigger: TGGGGGCCTGTCACTTGCCAAAGTAACATTCCTCTCTTGGGCCAAAATGAATGCTGACTCCTGATACTCCGCACAAGCACACCAACTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| 3UTR CAA 90 bp | GTCCGTATCCCTTCACACGCTGCTTCCATCAGCAACGCTTCAACGTaGACGTTTTCATTCATGAAGGTCTGGGCACAACTGCCTGACTGT | + |
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Preference number: 2 (lower is better) Translates to: VRIPSHAASISNAST*TFSFMKVWAQLPDC Trigger: ACAGTCAGGCAGTTGTGCCCAGACCTTCATGAATGAAAACGTCAACGTTGAAGCGTTGCTGATGGAAGCAGCGTGTGAAGGGATACGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| 3UTR-3UTR CCA 90 bp | GTCAGAGTGGCATCACCTTATTCTGCTGAAGAAGTTCACCTGAAACTCCCTGTCGTGGTAAGGAAGGGGTaGGTAGAGCAGGCTGTCTGT | + |
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Preference number: 2 (lower is better) Translates to: VRVASPYSAEEVHLKLPVVVRKG*VEQAVC Trigger: ACAGACAGCCTGCTCTACCCACCCCTTCCTTACCAC...GACAGGGAGTTTCAGGTGAACTTCTTCAGCAGAATAAGGTGATGCCACTCTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| 3UTR-3UTR CCA 90 bp | AAGACAAAATGGCCCCTGTGGCCACTGGTGTGGCCTGCAGACACAACACAAGACATGGAGAATCCCCTCTaGGGTTCAGTTTTAACACTG | + |
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Preference number: 2 (lower is better) Translates to: KTKWPLWPLVWPADTTQDMENPL*GSVLTL Trigger: CAGTGTTAAAACTGAACCCCAGAGGGGATTCTCCAT...GTCTTGTGTTGTGTCTGCAGGCCACACCAGTGGCCACAGGGGCCATTTTGTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| 3UTR CAA 90 bp | AGATGCAGATTGGCTATGGAGGGAGCATTTCTCCTATTTTACATCTaGGTTCAGCTAGGCGAGAATCCCTGGCTGTCTCTCCCTGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: RCRLAMEGAFLLFYI*VQLGENPWLSLPGS Trigger: AGAGCCAGGGAGAGACAGCCAGGGATTCTCGCCTAGCTGAACCAAGATGTAAAATAGGAGAAATGCTCCCTCCATAGCCAATCTGCATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| 3UTR-3UTR TCA 90 bp | TCTAAGCAGGTTCACAAAGACCATGGAACAGAGGGAAGGTTACAGCAGGGGTGTTTACACGCTCTCTCCTaGAAGGAGACACAAACCTGG | + |
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Preference number: 2 (lower is better) Translates to: SKQVHKDHGTEGRLQQGCLHALS*KETQTW Trigger: CCAGGTTTGTGTCTCCTTTCAGGAGAGAGCGTGTAA...ACACCCCTGCTGTAACCTTCCCTCTGTTCCATGGTCTTTGTGAACCTGCTTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| 3UTR-3UTR TCA 90 bp | GAACACACGCAGGAAATGGATTTACAATCTCATTACCAGACAAGCAAAAGGCCACTGAGGCAGCACTGGTaGCATCATCAGATGGCCCGG | + |
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Preference number: 2 (lower is better) Translates to: EHTQEMDLQSHYQTSKRPLRQHW*HHQMAR Trigger: CCGGGCCATCTGATGATGTCACCAGTGCTGCCTCAG...TGGCCTTTTGCTTGTCTGGTAATGAGATTGTAAATCCATTTCCTGCGTGTGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| 3UTR-3UTR TCA 90 bp | GGTGTGGCCTGCAGACACAACACAAGACTTTGCAGGTGGAAATGGGTTCAGCCACTGAAGAAGTTCACCTaGAACTCCCTGTCTCTGTAT | + |
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Preference number: 2 (lower is better) Translates to: GVACRHNTRLCRWKWVQPLKKFT*NSLSLY Trigger: ATACAGAGACAGGGAGTTTCAGGTGAACTTCTTCAG...TGGCTGAACCCATTTCCACCTGCAAAGTCTTGTGTTGTGTCTGCAGGCCACACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| 3UTR-3UTR GCA 90 bp | AAGACAAAATGGCCCCTGTGGCCACTGGTGTGGCCTGCAGACACAACACAAGACGGTGTTCTGCATTTGTaGCTATATGACCATACACAG | + |
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Preference number: 2 (lower is better) Translates to: KTKWPLWPLVWPADTTQDGVLHL*LYDHTQ Trigger: CTGTGTATGGTCATATAGGCACAAATGCAGAACACC...GTCTTGTGTTGTGTCTGCAGGCCACACCAGTGGCCACAGGGGCCATTTTGTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| 3UTR-3UTR TCA 90 bp | GAGGAGGGAGGGACTCTAGAAAATTGGTATTATTTAATTTGCAGCGGATCTGGCGCTCTACACTCTAGCTaGCATCCCTTCACCGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: EEGGTLENWYYLICSGSGALHSS*HPFTVS Trigger: GGAGACGGTGAAGGGATGTCAGCTAGAGTGTAGAGC...GCCAGATCCGCTGCAAATTAAATAATACCAATTTTCTAGAGTCCCTCCCTCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| 3UTR-3UTR TCA 90 bp | TCTAAGCAGGTTCACAAAGACCATGGAACAGAGGGAAGGTTACAGCAGGGGTGTGCATTTGTGCCTATATaGCCATACACAGGCATTACC | + |
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Preference number: 2 (lower is better) Translates to: SKQVHKDHGTEGRLQQGCAFVPI*PYTGIT Trigger: GGTAATGCCTGTGTATGGTCATATAGGCACAAATGC...ACACCCCTGCTGTAACCTTCCCTCTGTTCCATGGTCTTTGTGAACCTGCTTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| 3UTR-3UTR CCA 90 bp | GGCCACTGGTGTGGCCTGCAGACACAACACAAGACTTTGCAGGTGGAAATGGGTAGAAAGGCTGATGGTTaGAGTCAATATAATCTACCA | + |
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Preference number: 2 (lower is better) Translates to: GHWCGLQTQHKTLQVEMGRKADG*SQYNLP Trigger: TGGTAGATTATATTGACTCCAACCATCAGCCTTTCT...ACCCATTTCCACCTGCAAAGTCTTGTGTTGTGTCTGCAGGCCACACCAGTGGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| 3UTR-3UTR TCA 90 bp | TCTAAGCAGGTTCACAAAGACCATGGAACAGAGGGAAGGTTACAGCAGGGGTGTAGGCTGTCTGTATACTaGAATTCACTCTCTCTTTAC | + |
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Preference number: 2 (lower is better) Translates to: SKQVHKDHGTEGRLQQGCRLSVY*NSLSLY Trigger: GTAAAGAGAGAGTGAATTTCAGTATACAGACAGCCT...ACACCCCTGCTGTAACCTTCCCTCTGTTCCATGGTCTTTGTGAACCTGCTTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| 3UTR-3UTR TCA 90 bp | GATGGTTGGAGTCAATATAATCTACCACATATAACTCAGGTTCCGACTCTGGAAAGCTTAGCTTTCGTGTaGCAGATGTCCAGGGTCACA | + |
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Preference number: 2 (lower is better) Translates to: DGWSQYNLPHITQVPTLESLAFV*QMSRVT Trigger: TGTGACCCTGGACATCTGTCACACGAAAGCTAAGCT...TTCCAGAGTCGGAACCTGAGTTATATGTGGTAGATTATATTGACTCCAACCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| 3UTR-3UTR GCA 90 bp | CCAAGCTTTAGCTTCAGGAATACTAAAGGACATTCATTTTCCAATATGGGGTCAGAGTTGGTGTGCTTGTaGGGAGTATCAGGAGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: PSFSFRNTKGHSFSNMGSELVCL*GVSGVS Trigger: GCTGACTCCTGATACTCCGCACAAGCACACCAACTC...TGACCCCATATTGGAAAATGAATGTCCTTTAGTATTCCTGAAGCTAAAGCTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| 3UTR-3UTR CCA 90 bp | CAGGCTCACTCAGGAAAAACCAGAATAGAGTATTGCATTTGGAAACTGATAATACTGGCTGTCTCTCCCTaGCTCTACACTCTAGCTGAC | + |
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Preference number: 2 (lower is better) Translates to: QAHSGKTRIEYCIWKLIILAVSP*LYTLAD Trigger: GTCAGCTAGAGTGTAGAGCCAGGGAGAGACAGCCAG...TATTATCAGTTTCCAAATGCAATACTCTATTCTGGTTTTTCCTGAGTGAGCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| 3UTR-3UTR CCA 90 bp | GAGAACACACGCAGGAAATGGATTTACAATCTCATTACCAGACAAGCAAAAGGCACAAGACTTTGCAGGTaGAAATGGGTTCAGCCAGAC | + |
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Preference number: 2 (lower is better) Translates to: ENTRRKWIYNLITRQAKGTRLCR*KWVQPD Trigger: GTCTGGCTGAACCCATTTCCACCTGCAAAGTCTTGT...GCCTTTTGCTTGTCTGGTAATGAGATTGTAAATCCATTTCCTGCGTGTGTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| 3UTR-3UTR TCA 90 bp | CCAAGCTTTAGCTTCAGGAATACTAAAGGACATTCATTTTCCAATATGGGGTCAGCATATGTTTCACATTaGAACCCCCATCCTGCGAGG | + |
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Preference number: 2 (lower is better) Translates to: PSFSFRNTKGHSFSNMGSAYVSH*NPHPAR Trigger: CCTCGCAGGATGGGGGTTTCAATGTGAAACATATGC...TGACCCCATATTGGAAAATGAATGTCCTTTAGTATTCCTGAAGCTAAAGCTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| 3UTR-3UTR TCA 90 bp | AGGCTTATACATTGTATTAAATCTGTGAAGGGTGAAGCAGTCAGAAACACTGTATCAGTTACATTCGGCTaGAGGTTAGGCAAAGCGCAT | + |
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Preference number: 2 (lower is better) Translates to: RLIHCIKSVKGEAVRNTVSVTFG*RLGKAH Trigger: ATGCGCTTTGCCTAACCTTCAGCCGAATGTAACTGA...TACAGTGTTTCTGACTGCTTCACCCTTCACAGATTTAATACAATGTATAAGCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| 3UTR-3UTR CCA 90 bp | CAGGCTCACTCAGGAAAAACCAGAATAGAGTATTGCATTTGGAAACTGATAATAAGTCAGCATTCATTTTaGCCCAAGAGAGGAATGTTA | + |
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Preference number: 2 (lower is better) Translates to: QAHSGKTRIEYCIWKLIISQHSF*PKRGML Trigger: TAACATTCCTCTCTTGGGCCAAAATGAATGCTGACT...TATTATCAGTTTCCAAATGCAATACTCTATTCTGGTTTTTCCTGAGTGAGCCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| 3UTR CCA 72 bp | GACACCCAGCATCGGCATCTGGCCCTGCCCCGGCGGTaGCAGGCATCCGTCTGTCCACCTAGGCAGCGGCGT | + |
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Preference number: 3 (lower is better) Translates to: DTQHRHLALPRR*QASVCPPRQRR Trigger: ACGCCGCTGCCTAGGTGGACAGACGGATGCCTGCCACCGCCGGGGCAGGGCCAGATGCCGATGCTGGGTGTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| 3UTR TCA 72 bp | GGGCTGGCGGGGAAGGCCACCAGCTTAGCTTTCGTGTaGCAGATGTCCAGGGTCACATTTACGTGGGCCGTG | + |
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Preference number: 3 (lower is better) Translates to: GLAGKATSLAFV*QMSRVTFTWAV Trigger: CACGGCCCACGTAAATGTGACCCTGGACATCTGTCACACGAAAGCTAAGCTGGTGGCCTTCCCCGCCAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| 3UTR CCA 72 bp | AAGGCTAGCAAGCTACACAGGGGACCATGTAGGGCGTaGCAGGTCAGGAGTGGGCATCCAGAGCGAGATGCA | + |
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Preference number: 3 (lower is better) Translates to: KASKLHRGPCRA*QVRSGHPERDA Trigger: TGCATCTCGCTCTGGATGCCCACTCCTGACCTGCCACGCCCTACATGGTCCCCTGTGTAGCTTGCTAGCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| 3UTR TCA 72 bp | AACTCCCTGTCTCTGTATCATCTGAGGCAGCACTGGTaGCATCATCAGATGGCCCGGGGCTCTCTAGGCTTC | + |
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Preference number: 3 (lower is better) Translates to: NSLSLYHLRQHW*HHQMARGSLGF Trigger: GAAGCCTAGAGAGCCCCGGGCCATCTGATGATGTCACCAGTGCTGCCTCAGATGATACAGAGACAGGGAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| 3UTR GCA 72 bp | GGCGTGGCAGGTCAGGAGTGGGCATCCAGAGCGAGATaGAGATTGGCTATGGAGGGAGCATTTCTCCTATTT | + |
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Preference number: 3 (lower is better) Translates to: GVAGQEWASRAR*RLAMEGAFLLF Trigger: AAATAGGAGAAATGCTCCCTCCATAGCCAATCTGCATCTCGCTCTGGATGCCCACTCCTGACCTGCCACGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| 3UTR CCA 72 bp | ATCACCTGTCCAACAAAAACTCTGGTGTCTATTGTGTaGCGGGTGCCCTGTGTGGCCCAGATGCACCCTAGT | + |
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Preference number: 3 (lower is better) Translates to: ITCPTKTLVSIV*RVPCVAQMHPS Trigger: ACTAGGGTGCATCTGGGCCACACAGGGCACCCGCCACACAATAGACACCAGAGTTTTTGTTGGACAGGTGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136882.2 |
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| 3UTR CCA 72 bp | ATCAACAAGACAAAATGGCCCCTGTGGCCACTGGTGTaGCCTGCAGACACAACACAAGACTTTGCAGGTGGA | + |
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Preference number: 3 (lower is better) Translates to: INKTKWPLWPLV*PADTTQDFAGG Trigger: TCCACCTGCAAAGTCTTGTGTTGTGTCTGCAGGCCACACCAGTGGCCACAGGGGCCATTTTGTCTTGTTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| 3UTR CCA 72 bp | TCAGCATCAACAAGACAAAATGGCCCCTGTGGCCACTaGTGTGGCCTGCAGACACAACACAAGACTTTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SASTRQNGPCGH*CGLQTQHKTLQ Trigger: CTGCAAAGTCTTGTGTTGTGTCTGCAGGCCACACCAGTGGCCACAGGGGCCATTTTGTCTTGTTGATGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| 3UTR-3UTR CAA 90 bp | AGCATGGTTTCAGCATCAACAAGACAAAATGGCCCCTGTGGCCACTGGTGTGGCGGCTTTAAGGCACTTTaGGAGTTGGTGTGCTTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: SMVSASTRQNGPCGHWCGGFKAL*ELVCLC Trigger: GCACAAGCACACCAACTCCAAAAGTGCCTTAAAGCC...GCCACACCAGTGGCCACAGGGGCCATTTTGTCTTGTTGATGCTGAAACCATGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| 3UTR-3UTR CAA 90 bp | GGCCACTGGTGTGGCCTGCAGACACAACACAAGACTTTGCAGGTGGAAATGGGTTACACAGGCATTACCTaGCTAATAATCCCTTCGCTT | + |
|
Preference number: 3 (lower is better) Translates to: GHWCGLQTQHKTLQVEMGYTGIT*LIIPSL Trigger: AAGCGAAGGGATTATTAGCAAGGTAATGCCTGTGTA...ACCCATTTCCACCTGCAAAGTCTTGTGTTGTGTCTGCAGGCCACACCAGTGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| 3UTR TCA 72 bp | GAGTGGCATCACCTTATTCTGCTGAAGAAGTTCACCTaGAACTCCCTGTCTCTGTATCATCTGAGGCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: EWHHLILLKKFT*NSLSLYHLRQH Trigger: GTGCTGCCTCAGATGATACAGAGACAGGGAGTTTCAGGTGAACTTCTTCAGCAGAATAAGGTGATGCCACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| 3UTR GCA 72 bp | GAGGAAGTGGTCGTCTCTCCAATGTGCTGGGTGTTCTaGATTTGTGCCTATATGACCATACACAGGCATTAC | + |
|
Preference number: 3 (lower is better) Translates to: EEVVVSPMCWVF*ICAYMTIHRHY Trigger: GTAATGCCTGTGTATGGTCATATAGGCACAAATGCAGAACACCCAGCACATTGGAGAGACGACCACTTCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| 3UTR CCA 72 bp | AGGAGTGGGCATCCAGAGCGAGATGCAGATTGGCTATaGAGGGAGCATTTCTCCTATTTTACATCTTGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: RSGHPERDADWL*REHFSYFTSWF Trigger: GAACCAAGATGTAAAATAGGAGAAATGCTCCCTCCATAGCCAATCTGCATCTCGCTCTGGATGCCCACTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| 3UTR CCA 72 bp | AACGCTTCAACGTTGACGTTTTCATTCATGAAGGTCTaGGCACAACTGCCTGACTGTAAAGGCAGTGGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: NASTLTFSFMKV*AQLPDCKGSGL Trigger: AAGCCCACTGCCTTTACAGTCAGGCAGTTGTGCCCAGACCTTCATGAATGAAAACGTCAACGTTGAAGCGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| 3UTR CCA 72 bp | CTGCTTTGGTTCAAATTTTCCCAATTGAATAGAAGCTaGGCCACTCTGGTCAGTCAGACGAGGGCTCATCGA | + |
|
Preference number: 3 (lower is better) Translates to: LLWFKFSQLNRS*ATLVSQTRAHR Trigger: TCGATGAGCCCTCGTCTGACTGACCAGAGTGGCCCAGCTTCTATTCAATTGGGAAAATTTGAACCAAAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| 3UTR CCA 72 bp | GGTGTGGCCTGCAGACACAACACAAGACTTTGCAGGTaGAAATGGGTTCAGCCAGACTATAACAACAGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: GVACRHNTRLCR*KWVQPDYNNSL Trigger: AAGACTGTTGTTATAGTCTGGCTGAACCCATTTCCACCTGCAAAGTCTTGTGTTGTGTCTGCAGGCCACACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| 3UTR CCA 72 bp | CACTCAGGCAAGCCTGCGGAGAACACACGCAGGAAATaGATTTACAATCTCATTACCAGACAAGCAAAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: HSGKPAENTRRK*IYNLITRQAKG Trigger: GCCTTTTGCTTGTCTGGTAATGAGATTGTAAATCCATTTCCTGCGTGTGTTCTCCGCAGGCTTGCCTGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| 3UTR CCA 72 bp | CTTTTGCTTATTATATCACCTGTCCAACAAAAACTCTaGTGTCTATTGTGTGGCGGGTGCCCTGTGTGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: LLLIISPVQQKL*CLLCGGCPVWP Trigger: GGGCCACACAGGGCACCCGCCACACAATAGACACCAGAGTTTTTGTTGGACAGGTGATATAATAAGCAAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136882.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGAACACACGCAGGAAATGGATTTACAATCTCATTACCAGACAAGCAAAAGGCGAGAGGAATGTTACTTaGGCAAGTGACAGGCCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: ENTRRKWIYNLITRQAKGERNVT*ASDRPP Trigger: TGGGGGCCTGTCACTTGCCAAAGTAACATTCCTCTC...GCCTTTTGCTTGTCTGGTAATGAGATTGTAAATCCATTTCCTGCGTGTGTTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| 3UTR TCA 72 bp | CTCAGCAAAGGTCAGAGTGGCATCACCTTATTCTGCTaGAGAAGTTCACCTGAAACTCCCTGTCTCTGTATC | + |
|
Preference number: 3 (lower is better) Translates to: LSKGQSGITLFC*RSSPETPCLCI Trigger: GATACAGAGACAGGGAGTTTCAGGTGAACTTCTTCAGCAGAATAAGGTGATGCCACTCTGACCTTTGCTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| 3UTR CCA 72 bp | GTGCTTGTGCGGAGTATCAGGAGTCAGCATTCATTTTaGCCCAAGAGAGGAATGTTACTTTGGCAAGTGACA | + |
|
Preference number: 3 (lower is better) Translates to: VLVRSIRSQHSF*PKRGMLLWQVT Trigger: TGTCACTTGCCAAAGTAACATTCCTCTCTTGGGCCAAAATGAATGCTGACTCCTGATACTCCGCACAAGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| 3UTR CCA 72 bp | GCCTGCAGACACAACACAAGACTTTGCAGGTGGAAATaGGTTCAGCCAGACTATAACAACAGTCTTAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: ACRHNTRLCRWK*VQPDYNNSLKE Trigger: TTCCTTAAGACTGTTGTTATAGTCTGGCTGAACCCATTTCCACCTGCAAAGTCTTGTGTTGTGTCTGCAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| 3UTR-3UTR CAA 90 bp | GGAGGAGGGAGGGACTCTAGAAAATTGGTATTATTTAATTTGCAGCGGATCTGGGAGTCAGCATTCATTTaGGCCCAAGAGAGGAATGTT | + |
|
Preference number: 3 (lower is better) Translates to: GGGRDSRKLVLFNLQRIWESAFI*AQERNV Trigger: AACATTCCTCTCTTGGGCCAAAATGAATGCTGACTC...CCAGATCCGCTGCAAATTAAATAATACCAATTTTCTAGAGTCCCTCCCTCCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| 3UTR-3UTR CAA 90 bp | GGAGGAGGGAGGGACTCTAGAAAATTGGTATTATTTAATTTGCAGCGGATCTGGCTGGGTGTTCTGCATTaGTGCCTATATGACCATACA | + |
|
Preference number: 3 (lower is better) Translates to: GGGRDSRKLVLFNLQRIWLGVLH*CLYDHT Trigger: TGTATGGTCATATAGGCACAAATGCAGAACACCCAG...CCAGATCCGCTGCAAATTAAATAATACCAATTTTCTAGAGTCCCTCCCTCCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| 3UTR-3UTR CAA 90 bp | TCTAAGCAGGTTCACAAAGACCATGGAACAGAGGGAAGGTTACAGCAGGGGTGTAGGTTAGGATCTAGCTaGTTCTACTTATGGAATCTT | + |
|
Preference number: 3 (lower is better) Translates to: SKQVHKDHGTEGRLQQGCRLGSS*FYLWNL Trigger: AAGATTCCATAAGTAGAACAAGCTAGATCCTAACCT...ACACCCCTGCTGTAACCTTCCCTCTGTTCCATGGTCTTTGTGAACCTGCTTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| 3UTR TCA 72 bp | ATGATTAGGACAGAATGTTCGAGACAGGCACAAATCTaGCGTTACACGCTCTCTCCTGAAAGGAGACACAAA | + |
|
Preference number: 3 (lower is better) Translates to: MIRTECSRQAQI*RYTLSPERRHK Trigger: TTTGTGTCTCCTTTCAGGAGAGAGCGTGTAACGTCAGATTTGTGCCTGTCTCGAACATTCTGTCCTAATCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| 3UTR TCA 72 bp | CTCCAATGTGCTGGGTGTTCTGCATTTGTGCCTATATaGCCATACACAGGCATTACCTTGCTAATAATCCCT | + |
|
Preference number: 3 (lower is better) Translates to: LQCAGCSAFVPI*PYTGITLLIIP Trigger: AGGGATTATTAGCAAGGTAATGCCTGTGTATGGTCATATAGGCACAAATGCAGAACACCCAGCACATTGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| 3UTR TCA 72 bp | TTAATACAACCAGCAGTACGCTCATCATTCAAACCATaGGGTAGTTACAGTACAAAAAGACAGGCACGCGCC | + |
|
Preference number: 3 (lower is better) Translates to: LIQPAVRSSFKP*GSYSTKRQARA Trigger: GGCGCGTGCCTGTCTTTTTGTACTGTAACTACCTCATGGTTTGAATGATGAGCGTACTGCTGGTTGTATTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| 3UTR GCA 72 bp | GACATTTTAAAGGAGGAAGTGGTCGTCTCTCCAATGTaGTGGGTGTTCTGCATTTGTGCCTATATGACCATA | + |
|
Preference number: 3 (lower is better) Translates to: DILKEEVVVSPM*WVFCICAYMTI Trigger: TATGGTCATATAGGCACAAATGCAGAACACCCAGCACATTGGAGAGACGACCACTTCCTCCTTTAAAATGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| 3UTR TCA 72 bp | CAATGTATCTATGCATCGGTTGGAGACCCTCAGCCCTaGAGAAATCTGCTTTGGTTCAAATTTTCCCAATTG | + |
|
Preference number: 3 (lower is better) Translates to: QCIYASVGDPQP*RNLLWFKFSQL Trigger: CAATTGGGAAAATTTGAACCAAAGCAGATTTCTTCAGGGCTGAGGGTCTCCAACCGATGCATAGATACATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| 3UTR CCA 72 bp | AGGCTTCTCTACAGGCTCATCAGAAAGGCTGATGGTTaGAGTCAATATAATCTACCACATATAACTCAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: RLLYRLIRKADG*SQYNLPHITQV Trigger: AACCTGAGTTATATGTGGTAGATTATATTGACTCCAACCATCAGCCTTTCTGATGAGCCTGTAGAGAAGCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR GCA 90 bp | TCTGACGTTACACGCTCTCTCCTGAAAGGAGACACAAACCTGGCTTTAAGGCACGCTGGGCTCTGGACCTaGGGTGGCCAGGCAGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SDVTRSLLKGDTNLALRHAGLWT*GGQAGA Trigger: AGCGCCTGCCTGGCCACCGCAGGTCCAGAGCCCAGC...GTGCCTTAAAGCCAGGTTTGTGTCTCCTTTCAGGAGAGAGCGTGTAACGTCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CCA 90 bp | TTACAGGGAACCCAGATCAAGCCTTCTGAGTCTGGACACCCAGCATCGGCATCTCCCTTGGCAGCCCAGTaGTGCCTCTGCTGGCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LQGTQIKPSESGHPASASPLAAQ*CLCWHS Trigger: GCTGTGCCAGCAGAGGCACCACTGGGCTGCCAAGGG...AGATGCCGATGCTGGGTGTCCAGACTCAGAAGGCTTGATCTGGGTTCCCTGTAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CCA 90 bp | CGTGGCAGGTCAGGAGTGGGCATCCAGAGCGAGATGCAGATTGGCTATGGAGGGAGCGTGTCCAGGCCGTaGAAAATCTGTGGAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RGRSGVGIQSEMQIGYGGSVSRP*KICGGG Trigger: TCCTCCTCCACAGATTTTCCACGGCCTGGACACGCT...CCCTCCATAGCCAATCTGCATCTCGCTCTGGATGCCCACTCCTGACCTGCCACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR TCA 90 bp | ACGTGGGCCGTGGTAAGGAAGGGGTGGGTAGAGCAGGCTGTCTGTATACTGAAATCCTTCTCGTGGGGCTaGCTGGCCAGGACACAACCT | + |
|
Preference number: 4 (lower is better) Translates to: TWAVVRKGWVEQAVCILKSFSWG*LARTQP Trigger: AGGTTGTGTCCTGGCCAGTCAGCCCCACGAGAAGGA...TTTCAGTATACAGACAGCCTGCTCTACCCACCCCTTCCTTACCACGGCCCACGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR GCA 90 bp | TTACAGGGAACCCAGATCAAGCCTTCTGAGTCTGGACACCCAGCATCGGCATCTTGCTGTGGGCTGCGCTaGTGTTCTCCGAGGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LQGTQIKPSESGHPASASCCGLR*CSPRLV Trigger: CACCAGCCTCGGAGAACAGCAGCGCAGCCCACAGCA...AGATGCCGATGCTGGGTGTCCAGACTCAGAAGGCTTGATCTGGGTTCCCTGTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CCA 90 bp | AAGACAAAATGGCCCCTGTGGCCACTGGTGTGGCCTGCAGACACAACACAAGACCATCAGGGCCTGGACTaGATGAGAGGCACTGATCGG | + |
|
Preference number: 4 (lower is better) Translates to: KTKWPLWPLVWPADTTQDHQGLD*MRGTDR Trigger: CCGATCAGTGCCTCTCATCCAGTCCAGGCCCTGATG...GTCTTGTGTTGTGTCTGCAGGCCACACCAGTGGCCACAGGGGCCATTTTGTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CCA 90 bp | AGCATGGTTTCAGCATCAACAAGACAAAATGGCCCCTGTGGCCACTGGTGTGGCCCACACCAGGGGCTGTaGGGAGTTGAGCAGGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: SMVSASTRQNGPCGHWCGPHQGL*GVEQEH Trigger: GTGTTCCTGCTCAACTCCCCACAGCCCCTGGTGTGG...GCCACACCAGTGGCCACAGGGGCCATTTTGTCTTGTTGATGCTGAAACCATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CCA 90 bp | GGTGTGGCCTGCAGACACAACACAAGACTTTGCAGGTGGAAATGGGTTCAGCCATCTCGTGGGGCTGACTaGCCAGGACACAACCTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GVACRHNTRLCRWKWVQPSRGAD*PGHNLR Trigger: CCGAAGGTTGTGTCCTGGCCAGTCAGCCCCACGAGA...TGGCTGAACCCATTTCCACCTGCAAAGTCTTGTGTTGTGTCTGCAGGCCACACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CCA 90 bp | GGTGTGGCCTGCAGACACAACACAAGACTTTGCAGGTGGAAATGGGTTCAGCCAGTTCTCCGAGGCTGGTaGCGAGGTAGGGACTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GVACRHNTRLCRWKWVQPVLRGW*RGRDLL Trigger: CAGCAAGTCCCTACCTCGCCACCAGCCTCGGAGAAC...TGGCTGAACCCATTTCCACCTGCAAAGTCTTGTGTTGTGTCTGCAGGCCACACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR TCA 90 bp | ACGTGGGCCGTGGTAAGGAAGGGGTGGGTAGAGCAGGCTGTCTGTATACTGAAACTGGATGAGAGGCACTaGTCGGTGACAGTTCACACC | + |
|
Preference number: 4 (lower is better) Translates to: TWAVVRKGWVEQAVCILKLDERH*SVTVHT Trigger: GGTGTGAACTGTCACCGATCAGTGCCTCTCATCCAG...TTTCAGTATACAGACAGCCTGCTCTACCCACCCCTTCCTTACCACGGCCCACGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CCA 90 bp | GGTGTGGCCTGCAGACACAACACAAGACTTTGCAGGTGGAAATGGGTTCAGCCAGATGTGAACCTCCCTTaGCAGCCCAGTGGTGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GVACRHNTRLCRWKWVQPDVNLP*QPSGAS Trigger: AGAGGCACCACTGGGCTGCCAAGGGAGGTTCACATC...TGGCTGAACCCATTTCCACCTGCAAAGTCTTGTGTTGTGTCTGCAGGCCACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR TCA 90 bp | TCTAAGCAGGTTCACAAAGACCATGGAACAGAGGGAAGGTTACAGCAGGGGTGTAGCCAGACAGAACGGTaGAGCTCTCCATCAGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SKQVHKDHGTEGRLQQGCSQTER*SSPSGP Trigger: AGGCCCTGATGGAGAGCTTCACCGTTCTGTCTGGCT...ACACCCCTGCTGTAACCTTCCCTCTGTTCCATGGTCTTTGTGAACCTGCTTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR GCA 90 bp | GTCAGAGTGGCATCACCTTATTCTGCTGAAGAAGTTCACCTGAAACTCCCTGTCGGCCCCCGTCAGGAGTaGTCCGATCACAAATGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VRVASPYSAEEVHLKLPVGPRQE*SDHKCC Trigger: GCAGCATTTGTGATCGGAGCACTCCTGACGGGGGCC...GACAGGGAGTTTCAGGTGAACTTCTTCAGCAGAATAAGGTGATGCCACTCTGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR GCA 90 bp | ACGTTGACGTTTTCATTCATGAAGGTCTGGGCACAACTGCCTGACTGTAAAGGCGACTTGCTGCCTTCGTaGCGTCTCCCCTGTGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TLTFSFMKVWAQLPDCKGDLLPS*RLPCVG Trigger: TCCCACACAGGGGAGACGGCACGAAGGCAGCAAGTC...GCCTTTACAGTCAGGCAGTTGTGCCCAGACCTTCATGAATGAAAACGTCAACGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CCA 90 bp | AGCATGGTTTCAGCATCAACAAGACAAAATGGCCCCTGTGGCCACTGGTGTGGCGGGGATATCCGGGAATaGGAAGGGGAAACCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: SMVSASTRQNGPCGHWCGGDIRE*EGETSI Trigger: AATGGAGGTTTCCCCTTCCCATTCCCGGATATCCCC...GCCACACCAGTGGCCACAGGGGCCATTTTGTCTTGTTGATGCTGAAACCATGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR TCA 90 bp | TCTCCAATGTGCTGGGTGTTCTGCATTTGTGCCTATATGACCATACACAGGCATAGGGCCTGGACTGGATaGGAGGCACTGATCGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SPMCWVFCICAYMTIHRHRAWTG*EALIGD Trigger: GTCACCGATCAGTGCCTCTCATCCAGTCCAGGCCCT...ATGCCTGTGTATGGTCATATAGGCACAAATGCAGAACACCCAGCACATTGGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR GCA 90 bp | GGAGGAGGGAGGGACTCTAGAAAATTGGTATTATTTAATTTGCAGCGGATCTGGACAGTTCACACCGGGTaGTGGGCTCTGGACCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GGGRDSRKLVLFNLQRIWTVHTG*WALDLR Trigger: CCGCAGGTCCAGAGCCCAGCACCCGGTGTGAACTGT...CCAGATCCGCTGCAAATTAAATAATACCAATTTTCTAGAGTCCCTCCCTCCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR GCA 90 bp | TCTCCAATGTGCTGGGTGTTCTGCATTTGTGCCTATATGACCATACACAGGCATGCCCAGTGGTGCCTCTaGTGGCACAGCCAGACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SPMCWVFCICAYMTIHRHAQWCL*WHSQTE Trigger: TTCTGTCTGGCTGTGCCAGCAGAGGCACCACTGGGC...ATGCCTGTGTATGGTCATATAGGCACAAATGCAGAACACCCAGCACATTGGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CCA 90 bp | AGCATGGTTTCAGCATCAACAAGACAAAATGGCCCCTGTGGCCACTGGTGTGGCGAAGCTCAGGAGGAATaGTGTGGACTTCCTCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: SMVSASTRQNGPCGHWCGEAQEE*CGLPHL Trigger: GAGATGAGGAAGTCCACACCATTCCTCCTGAGCTTC...GCCACACCAGTGGCCACAGGGGCCATTTTGTCTTGTTGATGCTGAAACCATGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CCA 90 bp | AAGACAAAATGGCCCCTGTGGCCACTGGTGTGGCCTGCAGACACAACACAAGACGCAAATCCCAGATCTTaGTCAGCCTTAGTGACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: KTKWPLWPLVWPADTTQDANPRS*SALVTD Trigger: GTCTGTCACTAAGGCTGACCAAGATCTGGGATTTGC...GTCTTGTGTTGTGTCTGCAGGCCACACCAGTGGCCACAGGGGCCATTTTGTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CCA 90 bp | TCTGACGTTACACGCTCTCTCCTGAAAGGAGACACAAACCTGGCTTTAAGGCACGCCGTGGAAAATCTGTaGAGGAGGAGGAACCGGACT | + |
|
Preference number: 4 (lower is better) Translates to: SDVTRSLLKGDTNLALRHAVENL*RRRNRT Trigger: AGTCCGGTTCCTCCTCCTCCACAGATTTTCCACGGC...GTGCCTTAAAGCCAGGTTTGTGTCTCCTTTCAGGAGAGAGCGTGTAACGTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR TCA 90 bp | TCTGACGTTACACGCTCTCTCCTGAAAGGAGACACAAACCTGGCTTTAAGGCACATTGAACTCTGGGAATaGTGGGTTCCTTTGGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SDVTRSLLKGDTNLALRHIELWE*WVPLAG Trigger: CCCGGCCAAAGGAACCCATCATTCCCAGAGTTCAAT...GTGCCTTAAAGCCAGGTTTGTGTCTCCTTTCAGGAGAGAGCGTGTAACGTCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR GCA 90 bp | GGCCACTGGTGTGGCCTGCAGACACAACACAAGACTTTGCAGGTGGAAATGGGTGTAGCCATTGTCCAATaGCCACTTCATCAGATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GHWCGLQTQHKTLQVEMGVAIVQ*PLHQIL Trigger: GAGAATCTGATGAAGTGGGCATTGGACAATGGCTAC...ACCCATTTCCACCTGCAAAGTCTTGTGTTGTGTCTGCAGGCCACACCAGTGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR GCA 90 bp | AGCATGGTTTCAGCATCAACAAGACAAAATGGCCCCTGTGGCCACTGGTGTGGCCATTCATCTTGGCTTTaGAGGAAGGATCCAACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SMVSASTRQNGPCGHWCGHSSWL*RKDPTG Trigger: CCCTGTTGGATCCTTCCTGCAAAGCCAAGATGAATG...GCCACACCAGTGGCCACAGGGGCCATTTTGTCTTGTTGATGCTGAAACCATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CCA 90 bp | ACGTGGGCCGTGGTAAGGAAGGGGTGGGTAGAGCAGGCTGTCTGTATACTGAAATCCCTATGTTACACGTaGGAGGGAACACTTGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: TWAVVRKGWVEQAVCILKSLCYT*EGTLDL Trigger: AAGATCAAGTGTTCCCTCCCACGTGTAACATAGGGA...TTTCAGTATACAGACAGCCTGCTCTACCCACCCCTTCCTTACCACGGCCCACGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CCA 90 bp | TCTAAGCAGGTTCACAAAGACCATGGAACAGAGGGAAGGTTACAGCAGGGGTGTAACCTTCGGCGGCTTTaGGTTGAAGGTACTCCGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SKQVHKDHGTEGRLQQGCNLRRL*VEGTPQ Trigger: TTGCGGAGTACCTTCAACCCAAAGCCGCCGAAGGTT...ACACCCCTGCTGTAACCTTCCCTCTGTTCCATGGTCTTTGTGAACCTGCTTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CCA 90 bp | ACGTTGACGTTTTCATTCATGAAGGTCTGGGCACAACTGCCTGACTGTAAAGGCTGGCCACAGGAGCTATaGTGTATGACGTCACTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TLTFSFMKVWAQLPDCKGWPQEL*CMTSLG Trigger: GCCCAGTGACGTCATACACCATAGCTCCTGTGGCCA...GCCTTTACAGTCAGGCAGTTGTGCCCAGACCTTCATGAATGAAAACGTCAACGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CCA 90 bp | TTACAGGGAACCCAGATCAAGCCTTCTGAGTCTGGACACCCAGCATCGGCATCTGGGTACCATTCATCTTaGCTTTGCAGGAAGGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LQGTQIKPSESGHPASASGYHSS*LCRKDP Trigger: TGGATCCTTCCTGCAAAGCCAAGATGAATGGTACCC...AGATGCCGATGCTGGGTGTCCAGACTCAGAAGGCTTGATCTGGGTTCCCTGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CCA 90 bp | CAAAAACTCTGGTGTCTATTGTGTGGCGGGTGCCCTGTGTGGCCCAGATGCACCTCTTATTCTGCATCATaGTCCAGATCATGGTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QKLWCLLCGGCPVWPRCTSYSAS*SRSWWH Trigger: ATGCCACCATGATCTGGACCATGATGCAGAATAAGA...GGTGCATCTGGGCCACACAGGGCACCCGCCACACAATAGACACCAGAGTTTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136882.2 |
||
| 3UTR CAA 72 bp | GCAGGTCAGGAGTGGGCATCCAGAGCGAGATGCAGATaGGCTATGGAGGGAGCATTTCTCCTATTTTACATC | + |
|
Preference number: 4 (lower is better) Translates to: AGQEWASRARCR*AMEGAFLLFYI Trigger: GATGTAAAATAGGAGAAATGCTCCCTCCATAGCCAATCTGCATCTCGCTCTGGATGCCCACTCCTGACCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| 3UTR CAA 72 bp | ATTATATCACCTGTCCAACAAAAACTCTGGTGTCTATaGTGTGGCGGGTGCCCTGTGTGGCCCAGATGCACC | + |
|
Preference number: 4 (lower is better) Translates to: IISPVQQKLWCL*CGGCPVWPRCT Trigger: GGTGCATCTGGGCCACACAGGGCACCCGCCACACAATAGACACCAGAGTTTTTGTTGGACAGGTGATATAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136882.2 |
||
| CDS-3UTR TCA 90 bp | GGTGTGGCCTGCAGACACAACACAAGACTTTGCAGGTGGAAATGGGTTCAGCCATTCTCAAGCCGAAGATaGAATCTATTGGCCACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GVACRHNTRLCRWKWVQPFSSRR*NLLATG Trigger: TCCTGTGGCCAATAGATTTCATCTTCGGCTTGAGAA...TGGCTGAACCCATTTCCACCTGCAAAGTCTTGTGTTGTGTCTGCAGGCCACACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR GCA 90 bp | GGAGGAGGGAGGGACTCTAGAAAATTGGTATTATTTAATTTGCAGCGGATCTGGCTCTCTGTCTTCACATaGCACACCAGGGGCTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GGGRDSRKLVLFNLQRIWLSVFT*HTRGCG Trigger: CCCACAGCCCCTGGTGTGGCATGTGAAGACAGAGAG...CCAGATCCGCTGCAAATTAAATAATACCAATTTTCTAGAGTCCCTCCCTCCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| 3UTR CAA 72 bp | TCAGCATTCATTTTGGCCCAAGAGAGGAATGTTACTTaGGCAAGTGACAGGCCCCCAAGGCTAGCAAGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: SAFILAQERNVT*ASDRPPRLASY Trigger: GTAGCTTGCTAGCCTTGGGGGCCTGTCACTTGCCAAAGTAACATTCCTCTCTTGGGCCAAAATGAATGCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| 3UTR CAA 72 bp | CCTGAAAGGAGACACAAACCTGGCTTTAAGGCACTTTaGGAGTTGGTGTGCTTGTGCGGAGTATCAGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PERRHKPGFKAL*ELVCLCGVSGV Trigger: GACTCCTGATACTCCGCACAAGCACACCAACTCCAAAAGTGCCTTAAAGCCAGGTTTGTGTCTCCTTTCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR TCA 90 bp | GAGAACACACGCAGGAAATGGATTTACAATCTCATTACCAGACAAGCAAAAGGCAAGGATCCAACAGGGTaGGCTCCATCCCCGAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: ENTRRKWIYNLITRQAKGKDPTG*APSPSS Trigger: GCTACTCGGGGATGGAGCTCACCCTGTTGGATCCTT...GCCTTTTGCTTGTCTGGTAATGAGATTGTAAATCCATTTCCTGCGTGTGTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR TCA 90 bp | AGCATGGTTTCAGCATCAACAAGACAAAATGGCCCCTGTGGCCACTGGTGTGGCCATTCTGTCTGGGTTTaGGTATGGAGAGATAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SMVSASTRQNGPCGHWCGHSVWV*VWRDKA Trigger: TGCTTTATCTCTCCATACTCAAACCCAGACAGAATG...GCCACACCAGTGGCCACAGGGGCCATTTTGTCTTGTTGATGCTGAAACCATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR GCA 90 bp | GTCAGAGTGGCATCACCTTATTCTGCTGAAGAAGTTCACCTGAAACTCCCTGTCTACATGCTCATTCTCTaGCACAGAGAAGACCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VRVASPYSAEEVHLKLPVYMLIL*HREDPW Trigger: CCAGGGGTCTTCTCTGTGGCAGAGAATGAGCATGTA...GACAGGGAGTTTCAGGTGAACTTCTTCAGCAGAATAAGGTGATGCCACTCTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CCA 90 bp | ACGTTGACGTTTTCATTCATGAAGGTCTGGGCACAACTGCCTGACTGTAAAGGCGCTCCATATTCCTTTTaGGCCCAGTGTAGCAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: TLTFSFMKVWAQLPDCKGAPYSF*AQCSRC Trigger: GCATCTGCTACACTGGGCCCAAAAGGAATATGGAGC...GCCTTTACAGTCAGGCAGTTGTGCCCAGACCTTCATGAATGAAAACGTCAACGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CCA 90 bp | GGCCACTGGTGTGGCCTGCAGACACAACACAAGACTTTGCAGGTGGAAATGGGTTTCATCAGATTCTCTTaGGTGGAAGGGATGTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: GHWCGLQTQHKTLQVEMGFIRFS*VEGMSF Trigger: AAATGACATCCCTTCCACCCAAGAGAATCTGATGAA...ACCCATTTCCACCTGCAAAGTCTTGTGTTGTGTCTGCAGGCCACACCAGTGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| 3UTR CAA 72 bp | AGTGGTCGTCTCTCCAATGTGCTGGGTGTTCTGCATTaGTGCCTATATGACCATACACAGGCATTACCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SGRLSNVLGVLH*CLYDHTQALPC Trigger: GCAAGGTAATGCCTGTGTATGGTCATATAGGCACAAATGCAGAACACCCAGCACATTGGAGAGACGACCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| 3UTR CAA 72 bp | GGAGGGAGGGACTCTAGAAAATTGGTATTATTTAATTaGCAGCGGATCTGGCATGGAGAATCCCCTCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GGRDSRKLVLFN*QRIWHGESPLG Trigger: CCCCAGAGGGGATTCTCCATGCCAGATCCGCTGCAAATTAAATAATACCAATTTTCTAGAGTCCCTCCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR GCA 90 bp | GTCAGAGTGGCATCACCTTATTCTGCTGAAGAAGTTCACCTGAAACTCCCTGTCGTCCTTGGTCTGTACTaGGGAGGTTTAGGATGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VRVASPYSAEEVHLKLPVVLGLY*GGLGCE Trigger: TTCACATCCTAAACCTCCGCAGTACAGACCAAGGAC...GACAGGGAGTTTCAGGTGAACTTCTTCAGCAGAATAAGGTGATGCCACTCTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CCA 90 bp | GAACACACGCAGGAAATGGATTTACAATCTCATTACCAGACAAGCAAAAGGCCAAAACCAGGAAGAGTCTaGGGACACCAGCAGCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: EHTQEMDLQSHYQTSKRPKPGRV*GHQQPV Trigger: GACTGGCTGCTGGTGTCCCCAGACTCTTCCTGGTTT...TGGCCTTTTGCTTGTCTGGTAATGAGATTGTAAATCCATTTCCTGCGTGTGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CCA 90 bp | GGTGTGGCCTGCAGACACAACACAAGACTTTGCAGGTGGAAATGGGTTCAGCCAATTTGGTCACTGTCATaGATCGTTCACTCTCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GVACRHNTRLCRWKWVQPIWSLS*IVHSLF Trigger: GAAAAGAGAGTGAACGATCCATGACAGTGACCAAAT...TGGCTGAACCCATTTCCACCTGCAAAGTCTTGTGTTGTGTCTGCAGGCCACACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CCA 90 bp | GCAGTGGGCTTTGCTCATGGCTATTTCAGGTTAGGATCTAGCTTGTTCTACTTATTTGGGATTTCCCCTTaGAAGGATGGGCTGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AVGFAHGYFRLGSSLFYLFGISP*KDGLSR Trigger: CCTGGACAGCCCATCCTTCCAAGGGGAAATCCCAAA...TAAGTAGAACAAGCTAGATCCTAACCTGAAATAGCCATGAGCAAAGCCCACTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CCA 90 bp | GGAGGAGGGAGGGACTCTAGAAAATTGGTATTATTTAATTTGCAGCGGATCTGGCACTTTGGCAGCTTCTaGGAGCCCTTCTTCCTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GGGRDSRKLVLFNLQRIWHFGSF*EPFFLE Trigger: CTCTAGGAAGAAGGGCTCCCAGAAGCTGCCAAAGTG...CCAGATCCGCTGCAAATTAAATAATACCAATTTTCTAGAGTCCCTCCCTCCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR TCA 90 bp | CAACGAACTAGAGAAAAGTATTTCTCTAGTCTCAAACCATCCATGTGGGAAATCCGGAGGTTTAGGATGTaGACCTCCCTTGGCAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QRTREKYFSSLKPSMWEIRRFRM*TSLGSP Trigger: TGGGCTGCCAAGGGAGGTTCACATCCTAAACCTCCG...GATTTCCCACATGGATGGTTTGAGACTAGAGAAATACTTTTCTCTAGTTCGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR TCA 90 bp | TCTAAGCAGGTTCACAAAGACCATGGAACAGAGGGAAGGTTACAGCAGGGGTGTCTTAAGTTCGGTGAATaGAGTCACTGCTCCATATTC | + |
|
Preference number: 4 (lower is better) Translates to: SKQVHKDHGTEGRLQQGCLKFGE*SHCSIF Trigger: GAATATGGAGCAGTGACTTCATTCACCGAACTTAAG...ACACCCCTGCTGTAACCTTCCCTCTGTTCCATGGTCTTTGTGAACCTGCTTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR GCA 90 bp | CTTCCTTTTGCTTATTATATCACCTGTCCAACAAAAACTCTGGTGTCTATTGTGGGCCCCCGTCAGGAGTaGTCCGATCACAAATGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LPFAYYITCPTKTLVSIVGPRQE*SDHKCC Trigger: GCAGCATTTGTGATCGGAGCACTCCTGACGGGGGCC...CACAATAGACACCAGAGTTTTTGTTGGACAGGTGATATAATAAGCAAAAGGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000136882.2 |
||
| CDS-3UTR CCA 90 bp | GAGAACACACGCAGGAAATGGATTTACAATCTCATTACCAGACAAGCAAAAGGCAGGAGTCACACACTTTaGCAGCTTCTGGGAGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ENTRRKWIYNLITRQAKGRSHTL*QLLGAL Trigger: AAGGGCTCCCAGAAGCTGCCAAAGTGTGTGACTCCT...GCCTTTTGCTTGTCTGGTAATGAGATTGTAAATCCATTTCCTGCGTGTGTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| 3UTR CAA 72 bp | AAACCTGGCTTTAAGGCACTTTTGGAGTTGGTGTGCTaGTGCGGAGTATCAGGAGTCAGCATTCATTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KPGFKALLELVC*CGVSGVSIHFG Trigger: GCCAAAATGAATGCTGACTCCTGATACTCCGCACAAGCACACCAACTCCAAAAGTGCCTTAAAGCCAGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR TCA 90 bp | ACGTTGACGTTTTCATTCATGAAGGTCTGGGCACAACTGCCTGACTGTAAAGGCACTCCGCAAGGTAATTaGGCGAGAGAAAATTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TLTFSFMKVWAQLPDCKGTPQGN*ARENFS Trigger: GGAAAAATTTTCTCTCGCTCAATTACCTTGCGGAGT...GCCTTTACAGTCAGGCAGTTGTGCCCAGACCTTCATGAATGAAAACGTCAACGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR GCA 90 bp | ACGTTGACGTTTTCATTCATGAAGGTCTGGGCACAACTGCCTGACTGTAAAGGCACCTCAACATATACATaGTCATTCTCTGCCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TLTFSFMKVWAQLPDCKGTSTYT*SFSATE Trigger: CTCTGTGGCAGAGAATGAGCATGTATATGTTGAGGT...GCCTTTACAGTCAGGCAGTTGTGCCCAGACCTTCATGAATGAAAACGTCAACGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR GCA 90 bp | GAGGAGGGAGGGACTCTAGAAAATTGGTATTATTTAATTTGCAGCGGATCTGGCTGCTCCGATCACAAATaGTGCAAACGCAATGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: EEGGTLENWYYLICSGSGCSDHK*CKRNAH Trigger: ATGGGCATTGCGTTTGCAGCATTTGTGATCGGAGCA...GCCAGATCCGCTGCAAATTAAATAATACCAATTTTCTAGAGTCCCTCCCTCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CCA 90 bp | GAGGAGGGAGGGACTCTAGAAAATTGGTATTATTTAATTTGCAGCGGATCTGGCTCAGGAGGAATGGTGTaGACTTCCTCATCTCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: EEGGTLENWYYLICSGSGSGGMV*TSSSLI Trigger: GATGAGAGATGAGGAAGTCCACACCATTCCTCCTGA...GCCAGATCCGCTGCAAATTAAATAATACCAATTTTCTAGAGTCCCTCCCTCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CCA 90 bp | GATGGTTGGAGTCAATATAATCTACCACATATAACTCAGGTTCCGACTCTGGAAGTCCACTTCAGCATGTaGGATGGGGAAGTGCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: DGWSQYNLPHITQVPTLEVHFSM*DGEVHS Trigger: AGAGTGCACTTCCCCATCCCACATGCTGAAGTGGAC...TTCCAGAGTCGGAACCTGAGTTATATGTGGTAGATTATATTGACTCCAACCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR TCA 90 bp | TCCCTTCACCGTCTCCTTTACTCTTTAAAACATACGACCCCAAATGATGGATGTATTGTCACATTTGACTaGCAGGGCGATATTCACGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLHRLLYSLKHTTPNDGCIVTFD*QGDIHA Trigger: GGCGTGAATATCGCCCTGTCAGTCAAATGTGACAAT...ACATCCATCATTTGGGGTCGTATGTTTTAAAGAGTAAAGGAGACGGTGAAGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CCA 90 bp | GCAGTGGGCTTTGCTCATGGCTATTTCAGGTTAGGATCTAGCTTGTTCTACTTATCCCCGAGTAGCCATTaGTCTGGAAAGAATCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AVGFAHGYFRLGSSLFYLSPSSH*SGKNLC Trigger: ACAAAGATTCTTTCCAGACCAATGGCTACTCGGGGA...TAAGTAGAACAAGCTAGATCCTAACCTGAAATAGCCATGAGCAAAGCCCACTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CCA 90 bp | GCAGTGGGCTTTGCTCATGGCTATTTCAGGTTAGGATCTAGCTTGTTCTACTTAGACTCCAGTACAAAGTaGGTACCATTCATCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AVGFAHGYFRLGSSLFYLDSSTK*VPFILA Trigger: AGCCAAGATGAATGGTACCCACTTTGTACTGGAGTC...TAAGTAGAACAAGCTAGATCCTAACCTGAAATAGCCATGAGCAAAGCCCACTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CCA 90 bp | CCAAGCTTTAGCTTCAGGAATACTAAAGGACATTCATTTTCCAATATGGGGTCACTTCAGCATGTGGGATaGGGAAGTGCACTCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PSFSFRNTKGHSFSNMGSLQHVG*GSALSW Trigger: CCAAGAGAGTGCACTTCCCCATCCCACATGCTGAAG...TGACCCCATATTGGAAAATGAATGTCCTTTAGTATTCCTGAAGCTAAAGCTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CCA 90 bp | CCAAGCTTTAGCTTCAGGAATACTAAAGGACATTCATTTTCCAATATGGGGTCATGGTCCAGATCATGGTaGCATCTAGAGAGGTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PSFSFRNTKGHSFSNMGSWSRSW*HLERCR Trigger: CCTGCACCTCTCTAGATGCCACCATGATCTGGACCA...TGACCCCATATTGGAAAATGAATGTCCTTTAGTATTCCTGAAGCTAAAGCTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CCA 90 bp | CTTTTGCTTATTATATCACCTGTCCAACAAAAACTCTGGTGTCTATTGTGTGGCTGGTCCAGATCATGGTaGCATCTAGAGAGGTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLIISPVQQKLWCLLCGWSRSW*HLERCR Trigger: CCTGCACCTCTCTAGATGCCACCATGATCTGGACCA...GCCACACAATAGACACCAGAGTTTTTGTTGGACAGGTGATATAATAAGCAAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136882.2 |
||
| CDS-3UTR TCA 90 bp | GCAGTGGGCTTTGCTCATGGCTATTTCAGGTTAGGATCTAGCTTGTTCTACTTAAGATGCTCATTTTCTTaGGGGAAACTCCTTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AVGFAHGYFRLGSSLFYLRCSFS*GKLLSS Trigger: AGAGGAAAGGAGTTTCCCTCAAGAAAATGAGCATCT...TAAGTAGAACAAGCTAGATCCTAACCTGAAATAGCCATGAGCAAAGCCCACTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CCA 90 bp | GAACACACGCAGGAAATGGATTTACAATCTCATTACCAGACAAGCAAAAGGCCAAGGTGCTGTAAGGATTaGAGTTGGGGGAGATTAACT | + |
|
Preference number: 4 (lower is better) Translates to: EHTQEMDLQSHYQTSKRPRCCKD*SWGRLT Trigger: AGTTAATCTCCCCCAACTCCAATCCTTACAGCACCT...TGGCCTTTTGCTTGTCTGGTAATGAGATTGTAAATCCATTTCCTGCGTGTGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CCA 90 bp | GGAGGAGGGAGGGACTCTAGAAAATTGGTATTATTTAATTTGCAGCGGATCTGGGAAGATGAAATCTATTaGCCACAGGAGCTATGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GGGRDSRKLVLFNLQRIWEDEIY*PQELWC Trigger: ACACCATAGCTCCTGTGGCCAATAGATTTCATCTTC...CCAGATCCGCTGCAAATTAAATAATACCAATTTTCTAGAGTCCCTCCCTCCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CCA 90 bp | CCAAGCTTTAGCTTCAGGAATACTAAAGGACATTCATTTTCCAATATGGGGTCAGGGGAAACCTCCATTTaGGATTTCCCCTTGGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PSFSFRNTKGHSFSNMGSGETSI*DFPLEG Trigger: TCCTTCCAAGGGGAAATCCCAAATGGAGGTTTCCCC...TGACCCCATATTGGAAAATGAATGTCCTTTAGTATTCCTGAAGCTAAAGCTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CCA 90 bp | CAACGAACTAGAGAAAAGTATTTCTCTAGTCTCAAACCATCCATGTGGGAAATCTGGCTCTCTGTGGTCTaGAAGCAATTGAACTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QRTREKYFSSLKPSMWEIWLSVV*KQLNSG Trigger: CCCAGAGTTCAATTGCTTCCAGACCACAGAGAGCCA...GATTTCCCACATGGATGGTTTGAGACTAGAGAAATACTTTTCTCTAGTTCGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CCA 90 bp | CTCTTCCTTTTGCTTATTATATCACCTGTCCAACAAAAACTCTGGTGTCTATTGAGGAGTCACACACTTTaGCAGCTTCTGGGAGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LFLLLIISPVQQKLWCLLRSHTL*QLLGAL Trigger: AAGGGCTCCCAGAAGCTGCCAAAGTGTGTGACTCCT...CAATAGACACCAGAGTTTTTGTTGGACAGGTGATATAATAAGCAAAAGGAAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136882.2 |
||
| CDS-3UTR CCA 90 bp | GCAGTGGGCTTTGCTCATGGCTATTTCAGGTTAGGATCTAGCTTGTTCTACTTATCTTATTCTGCATCATaGTCCAGATCATGGTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AVGFAHGYFRLGSSLFYLSYSAS*SRSWWH Trigger: ATGCCACCATGATCTGGACCATGATGCAGAATAAGA...TAAGTAGAACAAGCTAGATCCTAACCTGAAATAGCCATGAGCAAAGCCCACTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CCA 90 bp | ATATTCTCTTCCTTTTGCTTATTATATCACCTGTCCAACAAAAACTCTGGTGTCGCCGTGGAAAATCTGTaGAGGAGGAGGAACCGGACT | + |
|
Preference number: 4 (lower is better) Translates to: IFSSFCLLYHLSNKNSGVAVENL*RRRNRT Trigger: AGTCCGGTTCCTCCTCCTCCACAGATTTTCCACGGC...GACACCAGAGTTTTTGTTGGACAGGTGATATAATAAGCAAAAGGAAGAGAATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000136882.2 |
||
| CDS-3UTR CCA 90 bp | TCTTCCTTTTGCTTATTATATCACCTGTCCAACAAAAACTCTGGTGTCTATTGTAGCGTGTCCAGGCCGTaGAAAATCTGTGGAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSFCLLYHLSNKNSGVYCSVSRP*KICGGG Trigger: TCCTCCTCCACAGATTTTCCACGGCCTGGACACGCT...ACAATAGACACCAGAGTTTTTGTTGGACAGGTGATATAATAAGCAAAAGGAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000136882.2 |
||
| 3UTR CAA 72 bp | GGCTTTGCTCATGGCTATTTCAGGTTAGGATCTAGCTaGTTCTACTTATGGAATCTTAAGTTGGTTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GFAHGYFRLGSS*FYLWNLKLVGR Trigger: CCTGCCAACCAACTTAAGATTCCATAAGTAGAACAAGCTAGATCCTAACCTGAAATAGCCATGAGCAAAGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR TCA 90 bp | CCAAGCTTTAGCTTCAGGAATACTAAAGGACATTCATTTTCCAATATGGGGTCATGGTCTGGAAGCAATTaGACTCTGGGAATGATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PSFSFRNTKGHSFSNMGSWSGSN*TLGMMG Trigger: ACCCATCATTCCCAGAGTTCAATTGCTTCCAGACCA...TGACCCCATATTGGAAAATGAATGTCCTTTAGTATTCCTGAAGCTAAAGCTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR GCA 90 bp | AGGCTTATACATTGTATTAAATCTGTGAAGGGTGAAGCAGTCAGAAACACTGTAATATTCACGCCCCCTTaGACTTCTTCTGGCTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RLIHCIKSVKGEAVRNTVIFTPP*TSSGSL Trigger: CAGAGAGCCAGAAGAAGTGCAAGGGGGCGTGAATAT...TACAGTGTTTCTGACTGCTTCACCCTTCACAGATTTAATACAATGTATAAGCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CCA 90 bp | GCAGTGGGCTTTGCTCATGGCTATTTCAGGTTAGGATCTAGCTTGTTCTACTTATCAGATTCTCTTGGGTaGAAGGGATGTCATTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: AVGFAHGYFRLGSSLFYLSDSLG*KGCHFL Trigger: TAAGAAATGACATCCCTTCCACCCAAGAGAATCTGA...TAAGTAGAACAAGCTAGATCCTAACCTGAAATAGCCATGAGCAAAGCCCACTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CCA 90 bp | CAACGAACTAGAGAAAAGTATTTCTCTAGTCTCAAACCATCCATGTGGGAAATCGGAAGTGCACTCTCTTaGAGCTGTAGAACTTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: QRTREKYFSSLKPSMWEIGSALS*SCRTSQ Trigger: CTGTGAAGTTCTACAGCTCCAAGAGAGTGCACTTCC...GATTTCCCACATGGATGGTTTGAGACTAGAGAAATACTTTTCTCTAGTTCGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CCA 90 bp | ATATTCTCTTCCTTTTGCTTATTATATCACCTGTCCAACAAAAACTCTGGTGTCCTTCAGCATGTGGGATaGGGAAGTGCACTCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: IFSSFCLLYHLSNKNSGVLQHVG*GSALSW Trigger: CCAAGAGAGTGCACTTCCCCATCCCACATGCTGAAG...GACACCAGAGTTTTTGTTGGACAGGTGATATAATAAGCAAAAGGAAGAGAATAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136882.2 |
||
| CDS-3UTR CCA 90 bp | TATTCTCTTCCTTTTGCTTATTATATCACCTGTCCAACAAAAACTCTGGTGTCTGTCCACTTCAGCATGTaGGATGGGGAAGTGCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: YSLPFAYYITCPTKTLVSVHFSM*DGEVHS Trigger: AGAGTGCACTTCCCCATCCCACATGCTGAAGTGGAC...AGACACCAGAGTTTTTGTTGGACAGGTGATATAATAAGCAAAAGGAAGAGAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000136882.2 |
||
| CDS-3UTR CCA 90 bp | ATATTCTCTTCCTTTTGCTTATTATATCACCTGTCCAACAAAAACTCTGGTGTCCACTTTGGCAGCTTCTaGGAGCCCTTCTTCCTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: IFSSFCLLYHLSNKNSGVHFGSF*EPFFLE Trigger: CTCTAGGAAGAAGGGCTCCCAGAAGCTGCCAAAGTG...GACACCAGAGTTTTTGTTGGACAGGTGATATAATAAGCAAAAGGAAGAGAATAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136882.2 |
||
| 3UTR CAA 72 bp | GGAAATCTAAAGTATTTCAATGTATCTATGCATCGGTaGGAGACCCTCAGCCCTGAAGAAATCTGCTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GNLKYFNVSMHR*ETLSPEEICFG Trigger: ACCAAAGCAGATTTCTTCAGGGCTGAGGGTCTCCAACCGATGCATAGATACATTGAAATACTTTAGATTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CCA 90 bp | CAACGAACTAGAGAAAAGTATTTCTCTAGTCTCAAACCATCCATGTGGGAAATCTTTCCTGATGAAAACTaGACCACAGAACCCTCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: QRTREKYFSSLKPSMWEIFPDEN*TTEPSE Trigger: TTCGGAGGGTTCTGTGGTCCAGTTTTCATCAGGAAA...GATTTCCCACATGGATGGTTTGAGACTAGAGAAATACTTTTCTCTAGTTCGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CCA 90 bp | CTTCCTTTTGCTTATTATATCACCTGTCCAACAAAAACTCTGGTGTCTATTGTGGGAAGTGCACTCTCTTaGAGCTGTAGAACTTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LPFAYYITCPTKTLVSIVGSALS*SCRTSQ Trigger: CTGTGAAGTTCTACAGCTCCAAGAGAGTGCACTTCC...CACAATAGACACCAGAGTTTTTGTTGGACAGGTGATATAATAAGCAAAAGGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136882.2 |
||
| CDS-3UTR TCA 90 bp | AGGCTTATACATTGTATTAAATCTGTGAAGGGTGAAGCAGTCAGAAACACTGTAGTGGGAGGGAACACTTaGTCTTCTCCCACTTTAATA | + |
|
Preference number: 4 (lower is better) Translates to: RLIHCIKSVKGEAVRNTVVGGNT*SSPTLI Trigger: TATTAAAGTGGGAGAAGATCAAGTGTTCCCTCCCAC...TACAGTGTTTCTGACTGCTTCACCCTTCACAGATTTAATACAATGTATAAGCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR TCA 90 bp | GATGGTTGGAGTCAATATAATCTACCACATATAACTCAGGTTCCGACTCTGGAATTTCATTGTCACATTTaGCTGACAGGGCGATATTCA | + |
|
Preference number: 4 (lower is better) Translates to: DGWSQYNLPHITQVPTLEFHCHI*LTGRYS Trigger: TGAATATCGCCCTGTCAGTCAAATGTGACAATGAAA...TTCCAGAGTCGGAACCTGAGTTATATGTGGTAGATTATATTGACTCCAACCATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR GCA 90 bp | ATGGATATTCTCTTCCTTTTGCTTATTATATCACCTGTCCAACAAAAACTCTGGTGCTCCGATCACAAATaGTGCAAACGCAATGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: MDILFLLLIISPVQQKLWCSDHK*CKRNAH Trigger: ATGGGCATTGCGTTTGCAGCATTTGTGATCGGAGCA...CCAGAGTTTTTGTTGGACAGGTGATATAATAAGCAAAAGGAAGAGAATATCCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136882.2 |
||
| CDS-3UTR CCA 90 bp | GATGGTTGGAGTCAATATAATCTACCACATATAACTCAGGTTCCGACTCTGGAACATTTCTTACCAATTTaGTCACTGTCATGGATCGTT | + |
|
Preference number: 4 (lower is better) Translates to: DGWSQYNLPHITQVPTLEHFLPI*SLSWIV Trigger: AACGATCCATGACAGTGACCAAATTGGTAAGAAATG...TTCCAGAGTCGGAACCTGAGTTATATGTGGTAGATTATATTGACTCCAACCATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS CCA 90 bp | AGTGCTCCCTATGCTGTGGGCTGCGCTGCTGTTCTCCGAGGCTGGTaGCGAGGTAGGGACTTGCTGCCTTCGTGCCGTCTCCCCTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SAPYAVGCAAVLRGW*RGRDLLPSCRLPCV Trigger: CACACAGGGGAGACGGCACGAAGGCAGCAAGTCCCTACCTCGCCACCAGCCTCGGAGAACAGCAGCGCAGCCCACAGCATAGGGAGCACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS CCA 90 bp | CTGAGTGCTCCCTATGCTGTGGGCTGCGCTGCTGTTCTCCGAGGCTaGTGGCGAGGTAGGGACTTGCTGCCTTCGTGCCGTCTCCCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LSAPYAVGCAAVLRG*WRGRDLLPSCRLPC Trigger: ACAGGGGAGACGGCACGAAGGCAGCAAGTCCCTACCTCGCCACCAGCCTCGGAGAACAGCAGCGCAGCCCACAGCATAGGGAGCACTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS TCA 90 bp | GAAGCTCTCCATCAGGGCCTGGACTGGATGAGAGGCACTGATCGGTaGCAGTTCACACCGGGTGCTGGGCTCTGGACCTGCGGTGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: EALHQGLDWMRGTDR*QFTPGAGLWTCGGQ Trigger: CTGGCCACCGCAGGTCCAGAGCCCAGCACCCGGTGTGAACTGTCACCGATCAGTGCCTCTCATCCAGTCCAGGCCCTGATGGAGAGCTTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS GCA 90 bp | GCTGCTAGAGCAGGGAGTGCTCTGAGTGCTCCCTATGCTGTGGGCTaGGCTGCTGTTCTCCGAGGCTGGTGGCGAGGTAGGGACTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AARAGSALSAPYAVG*AAVLRGWWRGRDLL Trigger: CAGCAAGTCCCTACCTCGCCACCAGCCTCGGAGAACAGCAGCGCAGCCCACAGCATAGGGAGCACTCAGAGCACTCCCTGCTCTAGCAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS TCA 90 bp | TGCGGCTGGCCTAGTCCTTGGTCTGTACTGCGGAGGTTTAGGATGTaGACCTCCCTTGGCAGCCCAGTGGTGCCTCTGCTGGCACAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: CGWPSPWSVLRRFRM*TSLGSPVVPLLAQP Trigger: TGGCTGTGCCAGCAGAGGCACCACTGGGCTGCCAAGGGAGGTTCACATCCTAAACCTCCGCAGTACAGACCAAGGACTAGGCCAGCCGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS TCA 90 bp | CAGCCAGACAGAACGGTGAAGCTCTCCATCAGGGCCTGGACTGGATaGGAGGCACTGATCGGTGACAGTTCACACCGGGTGCTGGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: QPDRTVKLSIRAWTG*EALIGDSSHRVLGS Trigger: AGAGCCCAGCACCCGGTGTGAACTGTCACCGATCAGTGCCTCTCATCCAGTCCAGGCCCTGATGGAGAGCTTCACCGTTCTGTCTGGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS CCA 90 bp | AGAGAGGTGCAGGCGTCGTCAGGAGTCACACACTTTGGCAGCTTCTaGGAGCCCTTCTTCCTAGAGCACAGCGTCAGCTCGCAGTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: REVQASSGVTHFGSF*EPFFLEHSVSSQCR Trigger: CCTGCACTGCGAGCTGACGCTGTGCTCTAGGAAGAAGGGCTCCCAGAAGCTGCCAAAGTGTGTGACTCCTGACGACGCCTGCACCTCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031224.15 ENSMUST00000136882.2 |
||
| CDS TCA 90 bp | GGAGTGCTCCGATCACAAATGCTGCAAACGCAATGCCCATCACGGTaGGCGTGTCCAGGCCGTGGAAAATCTGTGGAGGAGGAGGAACCG | + |
|
Preference number: 5 (lower is better) Translates to: GVLRSQMLQTQCPSR*ACPGRGKSVEEEEP Trigger: CGGTTCCTCCTCCTCCACAGATTTTCCACGGCCTGGACACGCTCACCGTGATGGGCATTGCGTTTGCAGCATTTGTGATCGGAGCACTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031224.15 ENSMUST00000136882.2 |
||
| CDS GCA 90 bp | GATATACCACAAGGCCCCCGTCAGGAGTGCTCCGATCACAAATGCTaGAAACGCAATGCCCATCACGGTGAGCGTGTCCAGGCCGTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: DIPQGPRQECSDHKC*KRNAHHGERVQAVE Trigger: TTCCACGGCCTGGACACGCTCACCGTGATGGGCATTGCGTTTGCAGCATTTGTGATCGGAGCACTCCTGACGGGGGCCTTGTGGTATATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031224.15 ENSMUST00000136882.2 |
||
| CDS GCA 90 bp | GTAGATATACCACAAGGCCCCCGTCAGGAGTGCTCCGATCACAAATaGTGCAAACGCAATGCCCATCACGGTGAGCGTGTCCAGGCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: VDIPQGPRQECSDHK*CKRNAHHGERVQAV Trigger: CACGGCCTGGACACGCTCACCGTGATGGGCATTGCGTTTGCAGCATTTGTGATCGGAGCACTCCTGACGGGGGCCTTGTGGTATATCTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031224.15 ENSMUST00000136882.2 |
||
| CDS CCA 90 bp | ACCAGCAGCCAGTCTCTCTGTCTTCACATGCCACACCAGGGGCTGTaGGGAGTTGAGCAGGAACACAACAGGCTTGTGGTGAGTGTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: TSSQSLCLHMPHQGL*GVEQEHNRLVVSVH Trigger: GTGCACACTCACCACAAGCCTGTTGTGTTCCTGCTCAACTCCCCACAGCCCCTGGTGTGGCATGTGAAGACAGAGAGACTGGCTGCTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS GCA 90 bp | CTCCCCTGTGTGGGAGTAGATATACCACAAGGCCCCCGTCAGGAGTaGTCCGATCACAAATGCTGCAAACGCAATGCCCATCACGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LPCVGVDIPQGPRQE*SDHKCCKRNAHHGE Trigger: CTCACCGTGATGGGCATTGCGTTTGCAGCATTTGTGATCGGAGCACTCCTGACGGGGGCCTTGTGGTATATCTACTCCCACACAGGGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS CCA 90 bp | AATGCTGCAAACGCAATGCCCATCACGGTGAGCGTGTCCAGGCCGTaGAAAATCTGTGGAGGAGGAGGAACCGGACTGGACTCCTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: NAANAMPITVSVSRP*KICGGGGTGLDSFM Trigger: CATGAAGGAGTCCAGTCCGGTTCCTCCTCCTCCACAGATTTTCCACGGCCTGGACACGCTCACCGTGATGGGCATTGCGTTTGCAGCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031224.15 ENSMUST00000136882.2 |
||
| CDS-3UTR CAA 90 bp | CGTGGCAGGTCAGGAGTGGGCATCCAGAGCGAGATGCAGATTGGCTATGGAGGGTGGGTACCATTCATCTaGGCTTTGCAGGAAGGATCC | + |
|
Preference number: 5 (lower is better) Translates to: RGRSGVGIQSEMQIGYGGWVPFI*ALQEGS Trigger: GGATCCTTCCTGCAAAGCCAAGATGAATGGTACCCA...CCCTCCATAGCCAATCTGCATCTCGCTCTGGATGCCCACTCCTGACCTGCCACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS GCA 90 bp | AGCTTCTGGGAGCCCTTCTTCCTAGAGCACAGCGTCAGCTCGCAGTaGAGGAAGAGCAGGGAGGTGTTGAACACGGACTTGAACACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SFWEPFFLEHSVSSQ*RKSREVLNTDLNTK Trigger: CTTTGTGTTCAAGTCCGTGTTCAACACCTCCCTGCTCTTCCTGCACTGCGAGCTGACGCTGTGCTCTAGGAAGAAGGGCTCCCAGAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031224.15 ENSMUST00000136882.2 |
||
| CDS CCA 90 bp | GGCGATATTCACGCCCCCTTGCACTTCTTCTGGCTCTCTGTGGTCTaGAAGCAATTGAACTCTGGGAATGATGGGTTCCTTTGGCCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GDIHAPLHFFWLSVV*KQLNSGNDGFLWPG Trigger: CCCCGGCCAAAGGAACCCATCATTCCCAGAGTTCAATTGCTTCCAGACCACAGAGAGCCAGAAGAAGTGCAAGGGGGCGTGAATATCGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS CCA 90 bp | TCCAGGAAATCCATTATCACCCGACTCCAAATCTTCGTAGCCGTCTaGCCAGCCACTGCTATCCCCAGGGGATGGAGCCTGCACCACAAT | + |
|
Preference number: 5 (lower is better) Translates to: SRKSIITRLQIFVAV*PATAIPRGWSLHHN Trigger: ATTGTGGTGCAGGCTCCATCCCCTGGGGATAGCAGTGGCTGGCCAGACGGCTACGAAGATTTGGAGTCGGGTGATAATGGATTTCCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS CCA 90 bp | CGCAATGCCCATCACGGTGAGCGTGTCCAGGCCGTGGAAAATCTGTaGAGGAGGAGGAACCGGACTGGACTCCTTCATGTTTGGAACATT | + |
|
Preference number: 5 (lower is better) Translates to: RNAHHGERVQAVENL*RRRNRTGLLHVWNI Trigger: AATGTTCCAAACATGAAGGAGTCCAGTCCGGTTCCTCCTCCTCCACAGATTTTCCACGGCCTGGACACGCTCACCGTGATGGGCATTGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031224.15 ENSMUST00000136882.2 |
||
| CDS GCA 90 bp | ACTTGGAGGACCACGGCCAGGGGCTTGGTGAATGTCTTCTTATTCTaGATCATGGTCCAGATCATGGTGGCATCTAGAGAGGTGCAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: TWRTTARGLVNVFLF*IMVQIMVASREVQA Trigger: CGCCTGCACCTCTCTAGATGCCACCATGATCTGGACCATGATGCAGAATAAGAAGACATTCACCAAGCCCCTGGCCGTGGTCCTCCAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031224.15 ENSMUST00000136882.2 |
||
| CDS GCA 90 bp | CTAACCTGTGTGGGAGTAGATATACCACAAGGCCCCCGTCAGGAGTaGTCCGATCACAAATGCTGCAAACGCAATGCCCATCACGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LTCVGVDIPQGPRQE*SDHKCCKRNAHHGE Trigger: CTCACCGTGATGGGCATTGCGTTTGCAGCATTTGTGATCGGAGCACTCCTGACGGGGGCCTTGTGGTATATCTACTCCCACACAGGTTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136882.2 |
||
| CDS CCA 90 bp | TCTGTGTTATACAGCTCCATGTTGAAGGTAGCATTTCCATCGAGCTaGTCCTGGAAGCCACTGGGACTCCTCAGCTGCCGCAAGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SVLYSSMLKVAFPSS*SWKPLGLLSCRKLQ Trigger: CTGCAGCTTGCGGCAGCTGAGGAGTCCCAGTGGCTTCCAGGACCAGCTCGATGGAAATGCTACCTTCAACATGGAGCTGTATAACACAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CAA 90 bp | TCTGCTGAAGAAGTTCACCTGAAACTCCCTGTCTCTGTATCATCTGAGGCAGCAGGATGTGAACCTCCCTaGGCAGCCCAGTGGTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SAEEVHLKLPVSVSSEAAGCEPP*AAQWCL Trigger: GAGGCACCACTGGGCTGCCAAGGGAGGTTCACATCC...TGCTGCCTCAGATGATACAGAGACAGGGAGTTTCAGGTGAACTTCTTCAGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CAA 90 bp | CAAAAACTCTGGTGTCTATTGTGTGGCGGGTGCCCTGTGTGGCCCAGATGCACCGTGTTGAACACGGACTaGAACACAAAGCTGAACCGC | + |
|
Preference number: 5 (lower is better) Translates to: QKLWCLLCGGCPVWPRCTVLNTD*NTKLNR Trigger: GCGGTTCAGCTTTGTGTTCAAGTCCGTGTTCAACAC...GGTGCATCTGGGCCACACAGGGCACCCGCCACACAATAGACACCAGAGTTTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136882.2 |
||
| CDS GCA 90 bp | TCTTATTCTGCATCATGGTCCAGATCATGGTGGCATCTAGAGAGGTaGAGGCGTCGTCAGGAGTCACACACTTTGGCAGCTTCTGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SYSASWSRSWWHLER*RRRQESHTLAASGS Trigger: GCTCCCAGAAGCTGCCAAAGTGTGTGACTCCTGACGACGCCTGCACCTCTCTAGATGCCACCATGATCTGGACCATGATGCAGAATAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031224.15 ENSMUST00000136882.2 |
||
| CDS TCA 90 bp | CCTGGAAGGTGCTGTAAGGATTGGAGTTGGGGGAGATTAACTCAATaGTATGCACTTCCTTCTCGTGGGGCTGACTGGCCAGGACACAAC | + |
|
Preference number: 5 (lower is better) Translates to: PGRCCKDWSWGRLTQ*YALPSRGADWPGHN Trigger: GTTGTGTCCTGGCCAGTCAGCCCCACGAGAAGGAAGTGCATATCATTGAGTTAATCTCCCCCAACTCCAATCCTTACAGCACCTTCCAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS CCA 90 bp | TTATACAGCTCCATGTTGAAGGTAGCATTTCCATCGAGCTGGTCCTaGAAGCCACTGGGACTCCTCAGCTGCCGCAAGCTGCAGTTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LYSSMLKVAFPSSWS*KPLGLLSCRKLQLN Trigger: GTTTAACTGCAGCTTGCGGCAGCTGAGGAGTCCCAGTGGCTTCCAGGACCAGCTCGATGGAAATGCTACCTTCAACATGGAGCTGTATAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CAA 90 bp | AGCATGGTTTCAGCATCAACAAGACAAAATGGCCCCTGTGGCCACTGGTGTGGCGGCAAATCCCAGATCTaGGTCAGCCTTAGTGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: SMVSASTRQNGPCGHWCGGKSQI*VSLSDR Trigger: TCTGTCACTAAGGCTGACCAAGATCTGGGATTTGCC...GCCACACCAGTGGCCACAGGGGCCATTTTGTCTTGTTGATGCTGAAACCATGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CAA 90 bp | ATCACCTGTCCAACAAAAACTCTGGTGTCTATTGTGTGGCGGGTGCCCTGTGTGAAGCTGAACCGCTTCTaGTCCACTTCAGCATGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: ITCPTKTLVSIVWRVPCVKLNRF*STSACG Trigger: CCCACATGCTGAAGTGGACAAGAAGCGGTTCAGCTT...CACACAGGGCACCCGCCACACAATAGACACCAGAGTTTTTGTTGGACAGGTGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136882.2 |
||
| CDS TCA 90 bp | AGCCTGCACCACAATAGAGTTATAGTAAACCACACCATCTGGGGCTaGCCTCCTATGTCTAGTACCACAGCCATTCAGCGGAGACTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SLHHNRVIVNHTIWG*PPMSSTTAIQRRLQ Trigger: CTGGAGTCTCCGCTGAATGGCTGTGGTACTAGACATAGGAGGTCAGCCCCAGATGGTGTGGTTTACTATAACTCTATTGTGGTGCAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CAA 90 bp | GAGGAGGGAGGGACTCTAGAAAATTGGTATTATTTAATTTGCAGCGGATCTGGCAGGGGCTGTGGGGAGTaGAGCAGGAACACAACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: EEGGTLENWYYLICSGSGRGCGE*SRNTTG Trigger: GCCTGTTGTGTTCCTGCTCAACTCCCCACAGCCCCT...GCCAGATCCGCTGCAAATTAAATAATACCAATTTTCTAGAGTCCCTCCCTCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CAA 90 bp | GGCCACTGGTGTGGCCTGCAGACACAACACAAGACTTTGCAGGTGGAAATGGGTCAGATGCTCATTTTCTaGAGGGAAACTCCTTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GHWCGLQTQHKTLQVEMGQMLIF*RETPFL Trigger: GAGGAAAGGAGTTTCCCTCAAGAAAATGAGCATCTG...ACCCATTTCCACCTGCAAAGTCTTGTGTTGTGTCTGCAGGCCACACCAGTGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS TCA 90 bp | CTCAAGCCGAAGATGAAATCTATTGGCCACAGGAGCTATGGTGTATaGCGTCACTGGGCTGTAGCCATTGTCCAATGCCCACTTCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: LKPKMKSIGHRSYGV*RHWAVAIVQCPLHQ Trigger: CTGATGAAGTGGGCATTGGACAATGGCTACAGCCCAGTGACGTCATACACCATAGCTCCTGTGGCCAATAGATTTCATCTTCGGCTTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS TCA 90 bp | AGTGGGTACCATTCATCTTGGCTTTGCAGGAAGGATCCAACAGGGTaGGCTCCATCCCCGAGTAGCCATTGGTCTGGAAAGAATCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SGYHSSWLCRKDPTG*APSPSSHWSGKNLC Trigger: ACAAAGATTCTTTCCAGACCAATGGCTACTCGGGGATGGAGCTCACCCTGTTGGATCCTTCCTGCAAAGCCAAGATGAATGGTACCCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS CCA 90 bp | CTTTCCTCTGTTTCTGCTGTCAAGGAGAAGTTTCCTGATGAAAACTaGACCACAGAACCCTCCGAAACCAGGAAGAGTCTGGGGACACCA | + |
|
Preference number: 5 (lower is better) Translates to: LSSVSAVKEKFPDEN*TTEPSETRKSLGTP Trigger: TGGTGTCCCCAGACTCTTCCTGGTTTCGGAGGGTTCTGTGGTCCAGTTTTCATCAGGAAACTTCTCCTTGACAGCAGAAACAGAGGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS CCA 90 bp | CGTTGTTCTCAAGCCGAAGATGAAATCTATTGGCCACAGGAGCTATaGTGTATGACGTCACTGGGCTGTAGCCATTGTCCAATGCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: RCSQAEDEIYWPQEL*CMTSLGCSHCPMPT Trigger: AGTGGGCATTGGACAATGGCTACAGCCCAGTGACGTCATACACCATAGCTCCTGTGGCCAATAGATTTCATCTTCGGCTTGAGAACAACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS CCA 90 bp | CTATGTCTAGTACCACAGCCATTCAGCGGAGACTCCAGTACAAAGTaGGTACCATTCATCTTGGCTTTGCAGGAAGGATCCAACAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LCLVPQPFSGDSSTK*VPFILALQEGSNRV Trigger: CACCCTGTTGGATCCTTCCTGCAAAGCCAAGATGAATGGTACCCACTTTGTACTGGAGTCTCCGCTGAATGGCTGTGGTACTAGACATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS CCA 90 bp | CACCTCAACATATACATGCTCATTCTCTGCCACAGAGAAGACCCCTaGGGAGGGCACCAGAAAGAGGTCTGTGTTATACAGCTCCATGTT | + |
|
Preference number: 5 (lower is better) Translates to: HLNIYMLILCHREDP*GGHQKEVCVIQLHV Trigger: AACATGGAGCTGTATAACACAGACCTCTTTCTGGTGCCCTCCCCAGGGGTCTTCTCTGTGGCAGAGAATGAGCATGTATATGTTGAGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS CCA 90 bp | GCTTCTTGTCCACTTCAGCATGTGGGATGGGGAAGTGCACTCTCTTaGAGCTGTAGAACTTCACAGAGTCATCCTTCGGACAGATGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ASCPLQHVGWGSALS*SCRTSQSHPSDRCS Trigger: AGAACATCTGTCCGAAGGATGACTCTGTGAAGTTCTACAGCTCCAAGAGAGTGCACTTCCCCATCCCACATGCTGAAGTGGACAAGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS CCA 90 bp | GGACTTGAACACAAAGCTGAACCGCTTCTTGTCCACTTCAGCATGTaGGATGGGGAAGTGCACTCTCTTGGAGCTGTAGAACTTCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: GLEHKAEPLLVHFSM*DGEVHSLGAVELHR Trigger: TCTGTGAAGTTCTACAGCTCCAAGAGAGTGCACTTCCCCATCCCACATGCTGAAGTGGACAAGAAGCGGTTCAGCTTTGTGTTCAAGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031224.15 ENSMUST00000136882.2 |
||
| CDS-3UTR CAA 90 bp | TCTGACGTTACACGCTCTCTCCTGAAAGGAGACACAAACCTGGCTTTAAGGCACATCAGGACGAGGTTTTaGACCACCTCAGGATCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SDVTRSLLKGDTNLALRHIRTRF*TTSGSS Trigger: AGAGGATCCTGAGGTGGTCAAAAACCTCGTCCTGAT...GTGCCTTAAAGCCAGGTTTGTGTCTCCTTTCAGGAGAGAGCGTGTAACGTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CAA 90 bp | TCTGACGTTACACGCTCTCTCCTGAAAGGAGACACAAACCTGGCTTTAAGGCACGTGGTCTGGAAGCAATaGAACTCTGGGAATGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: SDVTRSLLKGDTNLALRHVVWKQ*NSGNDG Trigger: CCCATCATTCCCAGAGTTCAATTGCTTCCAGACCAC...GTGCCTTAAAGCCAGGTTTGTGTCTCCTTTCAGGAGAGAGCGTGTAACGTCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CAA 90 bp | AGCATGGTTTCAGCATCAACAAGACAAAATGGCCCCTGTGGCCACTGGTGTGGCGTCTGGAAAGAATCTTaGTCTACAGCTACCACCATC | + |
|
Preference number: 5 (lower is better) Translates to: SMVSASTRQNGPCGHWCGVWKES*STATTI Trigger: GATGGTGGTAGCTGTAGACAAAGATTCTTTCCAGAC...GCCACACCAGTGGCCACAGGGGCCATTTTGTCTTGTTGATGCTGAAACCATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS TCA 90 bp | CACAACCTTCGGCGGCTTTGGGTTGAAGGTACTCCGCAAGGTAATTaGGCGAGAGAAAATTTTTCCCTATGTTACACGTGGGAGGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: HNLRRLWVEGTPQGN*ARENFSLCYTWEGT Trigger: TGTTCCCTCCCACGTGTAACATAGGGAAAAATTTTCTCTCGCTCAATTACCTTGCGGAGTACCTTCAACCCAAAGCCGCCGAAGGTTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS CCA 90 bp | CATCTCTCATCTCCTCGTTGTTCTCAAGCCGAAGATGAAATCTATTaGCCACAGGAGCTATGGTGTATGACGTCACTGGGCTGTAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: HLSSPRCSQAEDEIY*PQELWCMTSLGCSH Trigger: ATGGCTACAGCCCAGTGACGTCATACACCATAGCTCCTGTGGCCAATAGATTTCATCTTCGGCTTGAGAACAACGAGGAGATGAGAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CAA 90 bp | TTACAGGGAACCCAGATCAAGCCTTCTGAGTCTGGACACCCAGCATCGGCATCTTTATACAGCTCCATGTaGAAGGTAGCATTTCCATCG | + |
|
Preference number: 5 (lower is better) Translates to: LQGTQIKPSESGHPASASLYSSM*KVAFPS Trigger: CGATGGAAATGCTACCTTCAACATGGAGCTGTATAA...AGATGCCGATGCTGGGTGTCCAGACTCAGAAGGCTTGATCTGGGTTCCCTGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| CDS-3UTR CAA 90 bp | GGAGGAGGGAGGGACTCTAGAAAATTGGTATTATTTAATTTGCAGCGGATCTGGGATATTCACGCCCCCTaGCACTTCTTCTGGCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GGGRDSRKLVLFNLQRIWDIHAP*HFFWLS Trigger: AGAGAGCCAGAAGAAGTGCAAGGGGGCGTGAATATC...CCAGATCCGCTGCAAATTAAATAATACCAATTTTCTAGAGTCCCTCCCTCCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CAA 90 bp | GGAGGAGGGAGGGACTCTAGAAAATTGGTATTATTTAATTTGCAGCGGATCTGGAAGCTGAACCGCTTCTaGTCCACTTCAGCATGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GGGRDSRKLVLFNLQRIWKLNRF*STSACG Trigger: CCCACATGCTGAAGTGGACAAGAAGCGGTTCAGCTT...CCAGATCCGCTGCAAATTAAATAATACCAATTTTCTAGAGTCCCTCCCTCCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS CCA 90 bp | GGCTGTAGCCATTGTCCAATGCCCACTTCATCAGATTCTCTTGGGTaGAAGGGATGTCATTTCTTACCAATTTGGTCACTGTCATGGATC | + |
|
Preference number: 5 (lower is better) Translates to: GCSHCPMPTSSDSLG*KGCHFLPIWSLSWI Trigger: GATCCATGACAGTGACCAAATTGGTAAGAAATGACATCCCTTCCACCCAAGAGAATCTGATGAAGTGGGCATTGGACAATGGCTACAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS CCA 90 bp | TCAGACATTCTGTCTGGGTTTGAGTATGGAGAGATAAAGCAGGTTTaGATGGCAAATCCCAGATCTTGGTCAGCCTTAGTGACAGACACC | + |
|
Preference number: 5 (lower is better) Translates to: SDILSGFEYGEIKQV*MANPRSWSALVTDT Trigger: GGTGTCTGTCACTAAGGCTGACCAAGATCTGGGATTTGCCATCCAAACCTGCTTTATCTCTCCATACTCAAACCCAGACAGAATGTCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CAA 90 bp | TCCCTTCACCGTCTCCTTTACTCTTTAAAACATACGACCCCAAATGATGGATGTAGGGGAAACCTCCATTaGGGATTTCCCCTTGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLHRLLYSLKHTTPNDGCRGNLH*GFPLGR Trigger: CCTTCCAAGGGGAAATCCCAAATGGAGGTTTCCCCT...ACATCCATCATTTGGGGTCGTATGTTTTAAAGAGTAAAGGAGACGGTGAAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CAA 90 bp | TCTAAGCAGGTTCACAAAGACCATGGAACAGAGGGAAGGTTACAGCAGGGGTGTACCACCATCTTTTCATaGTCACATTTGACTGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: SKQVHKDHGTEGRLQQGCTTIFS*SHLTDR Trigger: CCTGTCAGTCAAATGTGACAATGAAAAGATGGTGGT...ACACCCCTGCTGTAACCTTCCCTCTGTTCCATGGTCTTTGTGAACCTGCTTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CAA 90 bp | TCTGCTGAAGAAGTTCACCTGAAACTCCCTGTCTCTGTATCATCTGAGGCAGCAAGAGATAAAGCAGGTTaGGATGGCAAATCCCAGATC | + |
|
Preference number: 5 (lower is better) Translates to: SAEEVHLKLPVSVSSEAARDKAG*DGKSQI Trigger: GATCTGGGATTTGCCATCCAAACCTGCTTTATCTCT...TGCTGCCTCAGATGATACAGAGACAGGGAGTTTCAGGTGAACTTCTTCAGCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| CDS-3UTR CAA 90 bp | CCAAGCTTTAGCTTCAGGAATACTAAAGGACATTCATTTTCCAATATGGGGTCACAGGAGTCACACACTTaGGCAGCTTCTGGGAGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: PSFSFRNTKGHSFSNMGSQESHT*AASGSP Trigger: AGGGCTCCCAGAAGCTGCCAAAGTGTGTGACTCCTG...TGACCCCATATTGGAAAATGAATGTCCTTTAGTATTCCTGAAGCTAAAGCTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| CDS-3UTR CAA 90 bp | GAACACACGCAGGAAATGGATTTACAATCTCATTACCAGACAAGCAAAAGGCCAACCACGGCCAGGGGCTaGGTGAATGTCTTCTTATTC | + |
|
Preference number: 5 (lower is better) Translates to: EHTQEMDLQSHYQTSKRPTTARG*VNVFLF Trigger: GAATAAGAAGACATTCACCAAGCCCCTGGCCGTGGT...TGGCCTTTTGCTTGTCTGGTAATGAGATTGTAAATCCATTTCCTGCGTGTGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| CDS-3UTR CAA 90 bp | GAGAACACACGCAGGAAATGGATTTACAATCTCATTACCAGACAAGCAAAAGGCGTGTTGAACACGGACTaGAACACAAAGCTGAACCGC | + |
|
Preference number: 5 (lower is better) Translates to: ENTRRKWIYNLITRQAKGVLNTD*NTKLNR Trigger: GCGGTTCAGCTTTGTGTTCAAGTCCGTGTTCAACAC...GCCTTTTGCTTGTCTGGTAATGAGATTGTAAATCCATTTCCTGCGTGTGTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| CDS TCA 90 bp | AGCTGTAGAACTTCACAGAGTCATCCTTCGGACAGATGTTCTCGATaGTGGTGTAATCAGACATTCTGTCTGGGTTTGAGTATGGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SCRTSQSHPSDRCSR*WCNQTFCLGLSMER Trigger: TCTCTCCATACTCAAACCCAGACAGAATGTCTGATTACACCATCATCGAGAACATCTGTCCGAAGGATGACTCTGTGAAGTTCTACAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| CDS CCA 90 bp | CTTGGGTGGAAGGGATGTCATTTCTTACCAATTTGGTCACTGTCATaGATCGTTCACTCTCTTTTCCAAAGCCAATACTGTCAGGAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LGWKGCHFLPIWSLS*IVHSLFQSQYCQEQ Trigger: TTGCTCCTGACAGTATTGGCTTTGGAAAAGAGAGTGAACGATCCATGACAGTGACCAAATTGGTAAGAAATGACATCCCTTCCACCCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| CDS-3UTR CAA 90 bp | CAACGAACTAGAGAAAAGTATTTCTCTAGTCTCAAACCATCCATGTGGGAAATCATTTGGGATTTCCCCTaGGAAGGATGGGCTGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QRTREKYFSSLKPSMWEIIWDFP*EGWAVQ Trigger: CTGGACAGCCCATCCTTCCAAGGGGAAATCCCAAAT...GATTTCCCACATGGATGGTTTGAGACTAGAGAAATACTTTTCTCTAGTTCGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CAA 90 bp | ATATTCTCTTCCTTTTGCTTATTATATCACCTGTCCAACAAAAACTCTGGTGTCCAGGAGTCACACACTTaGGCAGCTTCTGGGAGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: IFSSFCLLYHLSNKNSGVQESHT*AASGSP Trigger: AGGGCTCCCAGAAGCTGCCAAAGTGTGTGACTCCTG...GACACCAGAGTTTTTGTTGGACAGGTGATATAATAAGCAAAAGGAAGAGAATAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136882.2 |
||
| CDS TCA 90 bp | ACAGATGTTCTCGATGATGGTGTAATCAGACATTCTGTCTGGGTTTaGGTATGGAGAGATAAAGCAGGTTTGGATGGCAAATCCCAGATC | + |
|
Preference number: 5 (lower is better) Translates to: TDVLDDGVIRHSVWV*VWRDKAGLDGKSQI Trigger: GATCTGGGATTTGCCATCCAAACCTGCTTTATCTCTCCATACTCAAACCCAGACAGAATGTCTGATTACACCATCATCGAGAACATCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CAA 90 bp | GCAGTGGGCTTTGCTCATGGCTATTTCAGGTTAGGATCTAGCTTGTTCTACTTATTGACGTCAAAAGACTaGATCACCCAGTTGACAGAT | + |
|
Preference number: 5 (lower is better) Translates to: AVGFAHGYFRLGSSLFYLLTSKD*ITQLTD Trigger: ATCTGTCAACTGGGTGATCAAGTCTTTTGACGTCAA...TAAGTAGAACAAGCTAGATCCTAACCTGAAATAGCCATGAGCAAAGCCCACTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CAA 90 bp | TCTCCAATGTGCTGGGTGTTCTGCATTTGTGCCTATATGACCATACACAGGCATTTTTCATTGTCACATTaGACTGACAGGGCGATATTC | + |
|
Preference number: 5 (lower is better) Translates to: SPMCWVFCICAYMTIHRHFSLSH*TDRAIF Trigger: GAATATCGCCCTGTCAGTCAAATGTGACAATGAAAA...ATGCCTGTGTATGGTCATATAGGCACAAATGCAGAACACCCAGCACATTGGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CAA 90 bp | CTTCCTTTTGCTTATTATATCACCTGTCCAACAAAAACTCTGGTGTCTATTGTGACCACGGCCAGGGGCTaGGTGAATGTCTTCTTATTC | + |
|
Preference number: 5 (lower is better) Translates to: LPFAYYITCPTKTLVSIVTTARG*VNVFLF Trigger: GAATAAGAAGACATTCACCAAGCCCCTGGCCGTGGT...CACAATAGACACCAGAGTTTTTGTTGGACAGGTGATATAATAAGCAAAAGGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000136882.2 |
||
| CDS CCA 90 bp | TCATCAGATTCTCTTGGGTGGAAGGGATGTCATTTCTTACCAATTTaGTCACTGTCATGGATCGTTCACTCTCTTTTCCAAAGCCAATAC | + |
|
Preference number: 5 (lower is better) Translates to: SSDSLGWKGCHFLPI*SLSWIVHSLFQSQY Trigger: GTATTGGCTTTGGAAAAGAGAGTGAACGATCCATGACAGTGACCAAATTGGTAAGAAATGACATCCCTTCCACCCAAGAGAATCTGATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CAA 90 bp | CAGGCTCACTCAGGAAAAACCAGAATAGAGTATTGCATTTGGAAACTGATAATATTCTTTATAATCTACTaGGAGGACCACGGCCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: QAHSGKTRIEYCIWKLIIFFIIY*EDHGQG Trigger: CCCCTGGCCGTGGTCCTCCAAGTAGATTATAAAGAA...TATTATCAGTTTCCAAATGCAATACTCTATTCTGGTTTTTCCTGAGTGAGCCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CAA 90 bp | GAACACACGCAGGAAATGGATTTACAATCTCATTACCAGACAAGCAAAAGGCCATCATTTCTTACCAATTaGGTCACTGTCATGGATCGT | + |
|
Preference number: 5 (lower is better) Translates to: EHTQEMDLQSHYQTSKRPSFLTN*VTVMDR Trigger: ACGATCCATGACAGTGACCAAATTGGTAAGAAATGA...TGGCCTTTTGCTTGTCTGGTAATGAGATTGTAAATCCATTTCCTGCGTGTGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS-3UTR CAA 90 bp | ATGGATATTCTCTTCCTTTTGCTTATTATATCACCTGTCCAACAAAAACTCTGGTTCTTTATAATCTACTaGGAGGACCACGGCCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: MDILFLLLIISPVQQKLWFFIIY*EDHGQG Trigger: CCCCTGGCCGTGGTCCTCCAAGTAGATTATAAAGAA...CCAGAGTTTTTGTTGGACAGGTGATATAATAAGCAAAAGGAAGAGAATATCCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136882.2 |
||
| CDS-3UTR CAA 90 bp | CAGGCTCACTCAGGAAAAACCAGAATAGAGTATTGCATTTGGAAACTGATAATACTTCATCAGATTCTCTaGGGTGGAAGGGATGTCATT | + |
|
Preference number: 5 (lower is better) Translates to: QAHSGKTRIEYCIWKLIILHQIL*GGRDVI Trigger: AATGACATCCCTTCCACCCAAGAGAATCTGATGAAG...TATTATCAGTTTCCAAATGCAATACTCTATTCTGGTTTTTCCTGAGTGAGCCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS CCA 72 bp | CCCTATGCTGTGGGCTGCGCTGCTGTTCTCCGAGGCTaGTGGCGAGGTAGGGACTTGCTGCCTTCGTGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: PYAVGCAAVLRG*WRGRDLLPSCR Trigger: ACGGCACGAAGGCAGCAAGTCCCTACCTCGCCACCAGCCTCGGAGAACAGCAGCGCAGCCCACAGCATAGGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS CAA 72 bp | GCTGCTGTTCTCCGAGGCTGGTGGCGAGGTAGGGACTaGCTGCCTTCGTGCCGTCTCCCCTGTGTGGGAGTA | + |
|
Preference number: 6 (lower is better) Translates to: AAVLRGWWRGRD*LPSCRLPCVGV Trigger: TACTCCCACACAGGGGAGACGGCACGAAGGCAGCAAGTCCCTACCTCGCCACCAGCCTCGGAGAACAGCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS CAA 90 bp | GTGGGCTGCGCTGCTGTTCTCCGAGGCTGGTGGCGAGGTAGGGACTaGCTGCCTTCGTGCCGTCTCCCCTGTGTGGGAGTAGATATACCA | + |
|
Preference number: 6 (lower is better) Translates to: VGCAAVLRGWWRGRD*LPSCRLPCVGVDIP Trigger: TGGTATATCTACTCCCACACAGGGGAGACGGCACGAAGGCAGCAAGTCCCTACCTCGCCACCAGCCTCGGAGAACAGCAGCGCAGCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS TCA 72 bp | CATCAGGGCCTGGACTGGATGAGAGGCACTGATCGGTaGCAGTTCACACCGGGTGCTGGGCTCTGGACCTGC | + |
|
Preference number: 6 (lower is better) Translates to: HQGLDWMRGTDR*QFTPGAGLWTC Trigger: GCAGGTCCAGAGCCCAGCACCCGGTGTGAACTGTCACCGATCAGTGCCTCTCATCCAGTCCAGGCCCTGATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS TCA 72 bp | AGCTCTCCATCAGGGCCTGGACTGGATGAGAGGCACTaGTCGGTGACAGTTCACACCGGGTGCTGGGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SSPSGPGLDERH*SVTVHTGCWAL Trigger: CAGAGCCCAGCACCCGGTGTGAACTGTCACCGATCAGTGCCTCTCATCCAGTCCAGGCCCTGATGGAGAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS GCA 72 bp | CCTCTCTCTGCGGCTGGCCTAGTCCTTGGTCTGTACTaGGGAGGTTTAGGATGTGAACCTCCCTTGGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: PLSAAGLVLGLY*GGLGCEPPLAA Trigger: GGCTGCCAAGGGAGGTTCACATCCTAAACCTCCGCAGTACAGACCAAGGACTAGGCCAGCCGCAGAGAGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
||
| CDS GCA 72 bp | GAGGCAATGGGGTTCAGATGCAGGGTAACCTCTCTCTaGGGCTGGCCTAGTCCTTGGTCTGTACTGCGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: EAMGFRCRVTSL*GWPSPWSVLRR Trigger: CCTCCGCAGTACAGACCAAGGACTAGGCCAGCCGCAGAGAGAGGTTACCCTGCATCTGAACCCCATTGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| CDS GCA 72 bp | CCACAAGGCCCCCGTCAGGAGTGCTCCGATCACAAATaGTGCAAACGCAATGCCCATCACGGTGAGCGTGTC | + |
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Preference number: 6 (lower is better) Translates to: PQGPRQECSDHK*CKRNAHHGERV Trigger: GACACGCTCACCGTGATGGGCATTGCGTTTGCAGCATTTGTGATCGGAGCACTCCTGACGGGGGCCTTGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031224.15 ENSMUST00000136882.2 |
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| CDS GCA 72 bp | CGAGGCTGGTGGCGAGGTAGGGACTTGCTGCCTTCGTaGCGTCTCCCCTGTGTGGGAGTAGATATACCACAA | + |
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Preference number: 6 (lower is better) Translates to: RGWWRGRDLLPS*RLPCVGVDIPQ Trigger: TTGTGGTATATCTACTCCCACACAGGGGAGACGGCACGAAGGCAGCAAGTCCCTACCTCGCCACCAGCCTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| CDS CCA 72 bp | CAGGCGTCGTCAGGAGTCACACACTTTGGCAGCTTCTaGGAGCCCTTCTTCCTAGAGCACAGCGTCAGCTCG | + |
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Preference number: 6 (lower is better) Translates to: QASSGVTHFGSF*EPFFLEHSVSS Trigger: CGAGCTGACGCTGTGCTCTAGGAAGAAGGGCTCCCAGAAGCTGCCAAAGTGTGTGACTCCTGACGACGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031224.15 ENSMUST00000136882.2 |
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| CDS TCA 72 bp | AGAACGGTGAAGCTCTCCATCAGGGCCTGGACTGGATaGGAGGCACTGATCGGTGACAGTTCACACCGGGTG | + |
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Preference number: 6 (lower is better) Translates to: RTVKLSIRAWTG*EALIGDSSHRV Trigger: CACCCGGTGTGAACTGTCACCGATCAGTGCCTCTCATCCAGTCCAGGCCCTGATGGAGAGCTTCACCGTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| CDS TCA 72 bp | CCTAGTCCTTGGTCTGTACTGCGGAGGTTTAGGATGTaGACCTCCCTTGGCAGCCCAGTGGTGCCTCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: PSPWSVLRRFRM*TSLGSPVVPLL Trigger: CAGCAGAGGCACCACTGGGCTGCCAAGGGAGGTTCACATCCTAAACCTCCGCAGTACAGACCAAGGACTAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| CDS CCA 72 bp | TCCATTATCACCCGACTCCAAATCTTCGTAGCCGTCTaGCCAGCCACTGCTATCCCCAGGGGATGGAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: SIITRLQIFVAV*PATAIPRGWSL Trigger: CAGGCTCCATCCCCTGGGGATAGCAGTGGCTGGCCAGACGGCTACGAAGATTTGGAGTCGGGTGATAATGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| CDS CCA 72 bp | ATGGGGTTCAGATGCAGGGTAACCTCTCTCTGCGGCTaGCCTAGTCCTTGGTCTGTACTGCGGAGGTTTAGG | + |
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Preference number: 6 (lower is better) Translates to: MGFRCRVTSLCG*PSPWSVLRRFR Trigger: CCTAAACCTCCGCAGTACAGACCAAGGACTAGGCCAGCCGCAGAGAGAGGTTACCCTGCATCTGAACCCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| CDS CCA 72 bp | CAGTCTCTCTGTCTTCACATGCCACACCAGGGGCTGTaGGGAGTTGAGCAGGAACACAACAGGCTTGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: QSLCLHMPHQGL*GVEQEHNRLVV Trigger: CACCACAAGCCTGTTGTGTTCCTGCTCAACTCCCCACAGCCCCTGGTGTGGCATGTGAAGACAGAGAGACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| CDS CCA 72 bp | GGTCAGGGCCCAGCAGGATCCGAAGCTCAGGAGGAATaGTGTGGACTTCCTCATCTCTCATCTCCTCGTTGT | + |
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Preference number: 6 (lower is better) Translates to: GQGPAGSEAQEE*CGLPHLSSPRC Trigger: ACAACGAGGAGATGAGAGATGAGGAAGTCCACACCATTCCTCCTGAGCTTCGGATCCTGCTGGGCCCTGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| CDS CCA 72 bp | AATGGGAAGGGGAAACCTCCATTTGGGATTTCCCCTTaGAAGGATGGGCTGTCCAGGGCAGGCAGGTGGTCA | + |
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Preference number: 6 (lower is better) Translates to: NGKGKPPFGISP*KDGLSRAGRWS Trigger: TGACCACCTGCCTGCCCTGGACAGCCCATCCTTCCAAGGGGAAATCCCAAATGGAGGTTTCCCCTTCCCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| CDS CCA 72 bp | TACAGCTCCATGTTGAAGGTAGCATTTCCATCGAGCTaGTCCTGGAAGCCACTGGGACTCCTCAGCTGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: YSSMLKVAFPSS*SWKPLGLLSCR Trigger: GCGGCAGCTGAGGAGTCCCAGTGGCTTCCAGGACCAGCTCGATGGAAATGCTACCTTCAACATGGAGCTGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| CDS CAA 90 bp | CACGCCCCCTTGCACTTCTTCTGGCTCTCTGTGGTCTGGAAGCAATaGAACTCTGGGAATGATGGGTTCCTTTGGCCGGGGGATCCTATC | + |
|
Preference number: 6 (lower is better) Translates to: HAPLHFFWLSVVWKQ*NSGNDGFLWPGDPI Trigger: GATAGGATCCCCCGGCCAAAGGAACCCATCATTCCCAGAGTTCAATTGCTTCCAGACCACAGAGAGCCAGAAGAAGTGCAAGGGGGCGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| CDS TCA 72 bp | CGATCACAAATGCTGCAAACGCAATGCCCATCACGGTaGGCGTGTCCAGGCCGTGGAAAATCTGTGGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RSQMLQTQCPSR*ACPGRGKSVEE Trigger: CTCCTCCACAGATTTTCCACGGCCTGGACACGCTCACCGTGATGGGCATTGCGTTTGCAGCATTTGTGATCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031224.15 ENSMUST00000136882.2 |
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| CDS CAA 90 bp | CCTGGGGAGGGCACCAGAAAGAGGTCTGTGTTATACAGCTCCATGTaGAAGGTAGCATTTCCATCGAGCTGGTCCTGGAAGCCACTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: PGEGTRKRSVLYSSM*KVAFPSSWSWKPLG Trigger: TCCCAGTGGCTTCCAGGACCAGCTCGATGGAAATGCTACCTTCAACATGGAGCTGTATAACACAGACCTCTTTCTGGTGCCCTCCCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| CDS CAA 90 bp | CTAGAGCACAGCGTCAGCTCGCAGTGCAGGAAGAGCAGGGAGGTGTaGAACACGGACTTGAACACAAAGCTGAACCGCTTCTTGTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: LEHSVSSQCRKSREV*NTDLNTKLNRFLST Trigger: AGTGGACAAGAAGCGGTTCAGCTTTGTGTTCAAGTCCGTGTTCAACACCTCCCTGCTCTTCCTGCACTGCGAGCTGACGCTGTGCTCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031224.15 ENSMUST00000136882.2 |
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| CDS GCA 72 bp | GTGGGAGTAGATATACCACAAGGCCCCCGTCAGGAGTaGTCCGATCACAAATGCTGCAAACGCAATGCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: VGVDIPQGPRQE*SDHKCCKRNAH Trigger: ATGGGCATTGCGTTTGCAGCATTTGTGATCGGAGCACTCCTGACGGGGGCCTTGTGGTATATCTACTCCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031224.15 ENSMUST00000136882.2 |
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| CDS CAA 72 bp | CTGACTGGCCAGGACACAACCTTCGGCGGCTTTGGGTaGAAGGTACTCCGCAAGGTAATTGAGCGAGAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: LTGQDTTFGGFG*KVLRKVIEREK Trigger: TTTCTCTCGCTCAATTACCTTGCGGAGTACCTTCAACCCAAAGCCGCCGAAGGTTGTGTCCTGGCCAGTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| CDS TCA 72 bp | GCTCTCTGTGGTCTGGAAGCAATTGAACTCTGGGAATaGTGGGTTCCTTTGGCCGGGGGATCCTATCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: ALCGLEAIELWE*WVPLAGGSYLL Trigger: GAGAAGATAGGATCCCCCGGCCAAAGGAACCCATCATTCCCAGAGTTCAATTGCTTCCAGACCACAGAGAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| CDS TCA 72 bp | CATTCATCTTGGCTTTGCAGGAAGGATCCAACAGGGTaGGCTCCATCCCCGAGTAGCCATTGGTCTGGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: HSSWLCRKDPTG*APSPSSHWSGK Trigger: CTTTCCAGACCAATGGCTACTCGGGGATGGAGCTCACCCTGTTGGATCCTTCCTGCAAAGCCAAGATGAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| CDS CCA 72 bp | CCACTTCAGCATGTGGGATGGGGAAGTGCACTCTCTTaGAGCTGTAGAACTTCACAGAGTCATCCTTCGGAC | + |
|
Preference number: 6 (lower is better) Translates to: PLQHVGWGSALS*SCRTSQSHPSD Trigger: GTCCGAAGGATGACTCTGTGAAGTTCTACAGCTCCAAGAGAGTGCACTTCCCCATCCCACATGCTGAAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031224.15 ENSMUST00000136882.2 |
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| CDS CAA 72 bp | TTGCACTTCTTCTGGCTCTCTGTGGTCTGGAAGCAATaGAACTCTGGGAATGATGGGTTCCTTTGGCCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LHFFWLSVVWKQ*NSGNDGFLWPG Trigger: CCCCGGCCAAAGGAACCCATCATTCCCAGAGTTCAATTGCTTCCAGACCACAGAGAGCCAGAAGAAGTGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| CDS CAA 90 bp | AGGGAGGTGTTGAACACGGACTTGAACACAAAGCTGAACCGCTTCTaGTCCACTTCAGCATGTGGGATGGGGAAGTGCACTCTCTTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: REVLNTDLNTKLNRF*STSACGMGKCTLLE Trigger: CTCCAAGAGAGTGCACTTCCCCATCCCACATGCTGAAGTGGACAAGAAGCGGTTCAGCTTTGTGTTCAAGTCCGTGTTCAACACCTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031224.15 ENSMUST00000136882.2 |
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| CDS GCA 72 bp | TCACATTTGACTGACAGGGCGATATTCACGCCCCCTTaGACTTCTTCTGGCTCTCTGTGGTCTGGAAGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: SHLTDRAIFTPP*TSSGSLWSGSN Trigger: ATTGCTTCCAGACCACAGAGAGCCAGAAGAAGTGCAAGGGGGCGTGAATATCGCCCTGTCAGTCAAATGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| CDS GCA 72 bp | ACCACGGCCAGGGGCTTGGTGAATGTCTTCTTATTCTaGATCATGGTCCAGATCATGGTGGCATCTAGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: TTARGLVNVFLF*IMVQIMVASRE Trigger: CTCTCTAGATGCCACCATGATCTGGACCATGATGCAGAATAAGAAGACATTCACCAAGCCCCTGGCCGTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031224.15 ENSMUST00000136882.2 |
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| CDS CCA 72 bp | CACAAAGCTGAACCGCTTCTTGTCCACTTCAGCATGTaGGATGGGGAAGTGCACTCTCTTGGAGCTGTAGAA | + |
|
Preference number: 6 (lower is better) Translates to: HKAEPLLVHFSM*DGEVHSLGAVE Trigger: TTCTACAGCTCCAAGAGAGTGCACTTCCCCATCCCACATGCTGAAGTGGACAAGAAGCGGTTCAGCTTTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031224.15 ENSMUST00000136882.2 |
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| CDS TCA 72 bp | TGCTGTAAGGATTGGAGTTGGGGGAGATTAACTCAATaGTATGCACTTCCTTCTCGTGGGGCTGACTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: CCKDWSWGRLTQ*YALPSRGADWP Trigger: TGGCCAGTCAGCCCCACGAGAAGGAAGTGCATATCATTGAGTTAATCTCCCCCAACTCCAATCCTTACAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| CDS CCA 72 bp | CAAGCCGAAGATGAAATCTATTGGCCACAGGAGCTATaGTGTATGACGTCACTGGGCTGTAGCCATTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: QAEDEIYWPQEL*CMTSLGCSHCP Trigger: TGGACAATGGCTACAGCCCAGTGACGTCATACACCATAGCTCCTGTGGCCAATAGATTTCATCTTCGGCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| CDS CCA 72 bp | TCTCCTCGTTGTTCTCAAGCCGAAGATGAAATCTATTaGCCACAGGAGCTATGGTGTATGACGTCACTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SPRCSQAEDEIY*PQELWCMTSLG Trigger: GCCCAGTGACGTCATACACCATAGCTCCTGTGGCCAATAGATTTCATCTTCGGCTTGAGAACAACGAGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| CDS CCA 72 bp | ATATACATGCTCATTCTCTGCCACAGAGAAGACCCCTaGGGAGGGCACCAGAAAGAGGTCTGTGTTATACAG | + |
|
Preference number: 6 (lower is better) Translates to: IYMLILCHREDP*GGHQKEVCVIQ Trigger: CTGTATAACACAGACCTCTTTCTGGTGCCCTCCCCAGGGGTCTTCTCTGTGGCAGAGAATGAGCATGTATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| CDS CCA 72 bp | ATGTCTTCTTATTCTGCATCATGGTCCAGATCATGGTaGCATCTAGAGAGGTGCAGGCGTCGTCAGGAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: MSSYSASWSRSW*HLERCRRRQES Trigger: TGACTCCTGACGACGCCTGCACCTCTCTAGATGCCACCATGATCTGGACCATGATGCAGAATAAGAAGACAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031224.15 ENSMUST00000136882.2 |
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| CDS CAA 72 bp | GGCACCAGAAAGAGGTCTGTGTTATACAGCTCCATGTaGAAGGTAGCATTTCCATCGAGCTGGTCCTGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: GTRKRSVLYSSM*KVAFPSSWSWK Trigger: CTTCCAGGACCAGCTCGATGGAAATGCTACCTTCAACATGGAGCTGTATAACACAGACCTCTTTCTGGTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| CDS CAA 72 bp | TTGAACACGGACTTGAACACAAAGCTGAACCGCTTCTaGTCCACTTCAGCATGTGGGATGGGGAAGTGCACT | + |
|
Preference number: 6 (lower is better) Translates to: LNTDLNTKLNRF*STSACGMGKCT Trigger: AGTGCACTTCCCCATCCCACATGCTGAAGTGGACAAGAAGCGGTTCAGCTTTGTGTTCAAGTCCGTGTTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031224.15 ENSMUST00000136882.2 |
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| CDS TCA 72 bp | CGGCGGCTTTGGGTTGAAGGTACTCCGCAAGGTAATTaGGCGAGAGAAAATTTTTCCCTATGTTACACGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RRLWVEGTPQGN*ARENFSLCYTW Trigger: CCACGTGTAACATAGGGAAAAATTTTCTCTCGCTCAATTACCTTGCGGAGTACCTTCAACCCAAAGCCGCCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| CDS TCA 72 bp | AAGATGAAATCTATTGGCCACAGGAGCTATGGTGTATaGCGTCACTGGGCTGTAGCCATTGTCCAATGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: KMKSIGHRSYGV*RHWAVAIVQCP Trigger: TGGGCATTGGACAATGGCTACAGCCCAGTGACGTCATACACCATAGCTCCTGTGGCCAATAGATTTCATCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| CDS TCA 72 bp | CACAATAGAGTTATAGTAAACCACACCATCTGGGGCTaGCCTCCTATGTCTAGTACCACAGCCATTCAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: HNRVIVNHTIWG*PPMSSTTAIQR Trigger: CCGCTGAATGGCTGTGGTACTAGACATAGGAGGTCAGCCCCAGATGGTGTGGTTTACTATAACTCTATTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| CDS CCA 72 bp | CTGTCTGGGTTTGAGTATGGAGAGATAAAGCAGGTTTaGATGGCAAATCCCAGATCTTGGTCAGCCTTAGTG | + |
|
Preference number: 6 (lower is better) Translates to: LSGFEYGEIKQV*MANPRSWSALV Trigger: CACTAAGGCTGACCAAGATCTGGGATTTGCCATCCAAACCTGCTTTATCTCTCCATACTCAAACCCAGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| CDS TCA 72 bp | TCATCTCTCATCTCCTCGTTGTTCTCAAGCCGAAGATaGAATCTATTGGCCACAGGAGCTATGGTGTATGAC | + |
|
Preference number: 6 (lower is better) Translates to: SSLISSLFSSRR*NLLATGAMVYD Trigger: GTCATACACCATAGCTCCTGTGGCCAATAGATTTCATCTTCGGCTTGAGAACAACGAGGAGATGAGAGATGA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| CDS TCA 72 bp | ACTTCACAGAGTCATCCTTCGGACAGATGTTCTCGATaGTGGTGTAATCAGACATTCTGTCTGGGTTTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: TSQSHPSDRCSR*WCNQTFCLGLS Trigger: ACTCAAACCCAGACAGAATGTCTGATTACACCATCATCGAGAACATCTGTCCGAAGGATGACTCTGTGAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| CDS CCA 72 bp | CATTGTCCAATGCCCACTTCATCAGATTCTCTTGGGTaGAAGGGATGTCATTTCTTACCAATTTGGTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: HCPMPTSSDSLG*KGCHFLPIWSL Trigger: CAGTGACCAAATTGGTAAGAAATGACATCCCTTCCACCCAAGAGAATCTGATGAAGTGGGCATTGGACAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| CDS GCA 72 bp | CAGGTCGTATGTCAATTATTATATCCACCTGGAAGGTaGTGTAAGGATTGGAGTTGGGGGAGATTAACTCAA | + |
|
Preference number: 6 (lower is better) Translates to: QVVCQLLYPPGR*CKDWSWGRLTQ Trigger: TTGAGTTAATCTCCCCCAACTCCAATCCTTACAGCACCTTCCAGGTGGATATAATAATTGACATACGACCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| CDS CAA 72 bp | TTCTCTTGGGTGGAAGGGATGTCATTTCTTACCAATTaGGTCACTGTCATGGATCGTTCACTCTCTTTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: FSWVEGMSFLTN*VTVMDRSLSFP Trigger: TGGAAAAGAGAGTGAACGATCCATGACAGTGACCAAATTGGTAAGAAATGACATCCCTTCCACCCAAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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| CDS CAA 90 bp | TTCATCAGATTCTCTTGGGTGGAAGGGATGTCATTTCTTACCAATTaGGTCACTGTCATGGATCGTTCACTCTCTTTTCCAAAGCCAATA | + |
|
Preference number: 6 (lower is better) Translates to: FIRFSWVEGMSFLTN*VTVMDRSLSFPKPI Trigger: TATTGGCTTTGGAAAAGAGAGTGAACGATCCATGACAGTGACCAAATTGGTAAGAAATGACATCCCTTCCACCCAAGAGAATCTGATGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031224.15 |
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