Pregenerated sensors for TGFBR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000007613Ensembl transcript IDs: ENSMUST00000007757.15, ENSMUST00000044234.14, ENSMUST00000107725.3, ENSMUST00000126171.9
Found 163 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCACGGCTGCCTCTGGGCCCAGAGAAACCCTGGGAAGCTTTCAGTTaGCCATATTCCACTGCTGCAAGAGGAAGCAGAGCCCTCTGTTCT | + |
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Preference number: 1 (lower is better) Translates to: PRLPLGPEKPWEAFS*PYSTAARGSRALCS Trigger: AGAACAGAGGGCTCTGCTTCCTCTTGCAGCAGTGGAATATGGTCAACTGAAAGCTTCCCAGGGTTTCTCTGGGCCCAGAGGCAGCCGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
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| 3UTR CCA 90 bp | GGAAGAAGTATCCATAGTGCACAGAAAGGACCCCACGGCTGCCTCTaGGCCCAGAGAAACCCTGGGAAGCTTTCAGTTGACCATATTCCA | + |
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Preference number: 1 (lower is better) Translates to: GRSIHSAQKGPHGCL*AQRNPGKLSVDHIP Trigger: TGGAATATGGTCAACTGAAAGCTTCCCAGGGTTTCTCTGGGCCCAGAGGCAGCCGTGGGGTCCTTTCTGTGCACTATGGATACTTCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
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| 3UTR TCA 90 bp | CTCAAGGCACTTCTGGAGTACTACTGTAGTAGCAGGATTACAGGCTaGGCTTCATGCCTTTACTGTCCTACTAGAGACACAGCTGGCCAC | + |
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Preference number: 1 (lower is better) Translates to: LKALLEYYCSSRITG*ASCLYCPTRDTAGH Trigger: GTGGCCAGCTGTGTCTCTAGTAGGACAGTAAAGGCATGAAGCTCAGCCTGTAATCCTGCTACTACAGTAGTACTCCAGAAGTGCCTTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007757.15 |
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| 3UTR CCA 90 bp | GACAATTTGCAGAGGGAAGAGTCAAACATGTATGGATTACAAAAATaGCTACATGGCCACTTAAGTCTGCAGCGAGAACCAAAATCTGGA | + |
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Preference number: 1 (lower is better) Translates to: DNLQREESNMYGLQK*LHGHLSLQREPKSG Trigger: TCCAGATTTTGGTTCTCGCTGCAGACTTAAGTGGCCATGTAGCCATTTTTGTAATCCATACATGTTTGACTCTTCCCTCTGCAAATTGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007757.15 |
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| 3UTR TCA 90 bp | AGACCCAACGGACTGACTTTGACATTTAATATGACCAAGAATATATaGAGAGAGCCTCTACTCAGAATAGCTATTAGTTGCTGCTTCTCC | + |
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Preference number: 1 (lower is better) Translates to: RPNGLTLTFNMTKNI*REPLLRIAISCCFS Trigger: GGAGAAGCAGCAACTAATAGCTATTCTGAGTAGAGGCTCTCTTCATATATTCTTGGTCATATTAAATGTCAAAGTCAGTCCGTTGGGTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007757.15 |
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| 3UTR TCA 90 bp | CACAATGTAGAACCAGAACACTCCCATGACCAAGGAACAAAGAAATaGTTTACAATCATTCCTTCAGTGCATGGAATGAAATCACAATGT | + |
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Preference number: 1 (lower is better) Translates to: HNVEPEHSHDQGTKK*FTIIPSVHGMKSQC Trigger: ACATTGTGATTTCATTCCATGCACTGAAGGAATGATTGTAAATCATTTCTTTGTTCCTTGGTCATGGGAGTGTTCTGGTTCTACATTGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007757.15 |
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| 3UTR TCA 90 bp | GCCCCAAAAGTACCTGATTATAGCACAAGAGCTTATTTAAGCAGGTaGTACAACTGTAACAACAAACCCTTACTTACATTGATGAAATCA | + |
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Preference number: 1 (lower is better) Translates to: APKVPDYSTRAYLSR*YNCNNKPLLTLMKS Trigger: TGATTTCATCAATGTAAGTAAGGGTTTGTTGTTACAGTTGTATCACCTGCTTAAATAAGCTCTTGTGCTATAATCAGGTACTTTTGGGGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007757.15 |
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| 3UTR TCA 90 bp | TTGGTGTGCATGTTAAGTAGTAGTTTGTCATTGGTTTTACGTATCTaGCAATTTGCAGAGGGAAGAGTCAAACATGTATGGATTACAAAA | + |
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Preference number: 1 (lower is better) Translates to: LVCMLSSSLSLVLRI*QFAEGRVKHVWITK Trigger: TTTTGTAATCCATACATGTTTGACTCTTCCCTCTGCAAATTGTCAGATACGTAAAACCAATGACAAACTACTACTTAACATGCACACCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007757.15 |
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| 3UTR CAA 90 bp | CCCACGGCTGCCTCTGGGCCCAGAGAAACCCTGGGAAGCTTTCAGTaGACCATATTCCACTGCTGCAAGAGGAAGCAGAGCCCTCTGTTC | + |
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Preference number: 2 (lower is better) Translates to: PTAASGPRETLGSFQ*TIFHCCKRKQSPLF Trigger: GAACAGAGGGCTCTGCTTCCTCTTGCAGCAGTGGAATATGGTCAACTGAAAGCTTCCCAGGGTTTCTCTGGGCCCAGAGGCAGCCGTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
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| 3UTR-3UTR GCA 90 bp | GGGGTGTTCCCGCATGGCAGTCACTGCTTATCAATGCTACAGCCTTGCCTCAGTAAAGGACCCCACGGCTaGCTCTGGGCCCAGAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: GVFPHGSHCLSMLQPCLSKGPHG*LWAQRN Trigger: GTTTCTCTGGGCCCAGAGGCAGCCGTGGGGTCCTTT...ACTGAGGCAAGGCTGTAGCATTGATAAGCAGTGACTGCCATGCGGGAACACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 |
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| 3UTR-3UTR GCA 90 bp | CAGGCTAAACGTCTCAACTGCAGAGCTCCAGTGCTCCTGTGGGGTGTTCCCGCATTGACCATATTCCACTaGTGCAAGAGGAAGCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: QAKRLNCRAPVLLWGVPALTIFH*CKRKQS Trigger: GCTCTGCTTCCTCTTGCAGCAGTGGAATATGGTCAA...TGCGGGAACACCCCACAGGAGCACTGGAGCTCTGCAGTTGAGACGTTTAGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 |
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| 3UTR-3UTR TCA 90 bp | TCTGGAAGAAGTATCCATAGTGCACAGAAAGGACCCCACGGCTGCCTCTGGGCCTGGGAAGCTTTCAGTTaGCCATATTCCACTGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: SGRSIHSAQKGPHGCLWAWEAFS*PYSTAA Trigger: TGCAGCAGTGGAATATGGTCAACTGAAAGCTTCCCA...GGCCCAGAGGCAGCCGTGGGGTCCTTTCTGTGCACTATGGATACTTCTTCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
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| 3UTR-3UTR GCA 90 bp | CTGCAGCGAGAACCAAAATCTGGAATTCTTGATGGCCACAGCCCCACACAGGGCCCGCATGGCAGTCACTaGTTATCAATGCTACAGCCT | + |
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Preference number: 2 (lower is better) Translates to: LQREPKSGILDGHSPTQGPHGSH*LSMLQP Trigger: AGGCTGTAGCATTGATAAGCAGTGACTGCCATGCGG...GCCCTGTGTGGGGCTGTGGCCATCAAGAATTCCAGATTTTGGTTCTCGCTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007757.15 |
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| 3UTR CAA 90 bp | TGGGGTGTTCCCGCATGGCAGTCACTGCTTATCAATGCTACAGCCTaGCCTCAGTGGTTCAAGCACATCTGGGTAGGAGAAAGGCATGAA | + |
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Preference number: 2 (lower is better) Translates to: WGVPAWQSLLINATA*PQWFKHIWVGERHE Trigger: TTCATGCCTTTCTCCTACCCAGATGTGCTTGAACCACTGAGGCAAGGCTGTAGCATTGATAAGCAGTGACTGCCATGCGGGAACACCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 |
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| 3UTR-3UTR GCA 90 bp | CTGCAGCGAGAACCAAAATCTGGAATTCTTGATGGCCACAGCCCCACACAGGGCAAGCCACACAAGCCCTaGAAAGATTTGACAGCACTG | + |
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Preference number: 2 (lower is better) Translates to: LQREPKSGILDGHSPTQGKPHKP*KDLTAL Trigger: CAGTGCTGTCAAATCTTTGCAGGGCTTGTGTGGCTT...GCCCTGTGTGGGGCTGTGGCCATCAAGAATTCCAGATTTTGGTTCTCGCTGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007757.15 |
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| 3UTR-3UTR TCA 90 bp | CAGGCTAAACGTCTCAACTGCAGAGCTCCAGTGCTCCTGTGGGGTGTTCCCGCAACAGTACATTCAAAGTaGACCAAGGAAACACTAGTG | + |
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Preference number: 2 (lower is better) Translates to: QAKRLNCRAPVLLWGVPATVHSK*TKETLV Trigger: CACTAGTGTTTCCTTGGTTCACTTTGAATGTACTGT...TGCGGGAACACCCCACAGGAGCACTGGAGCTCTGCAGTTGAGACGTTTAGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 |
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| 3UTR-3UTR GCA 90 bp | TTCTGTAACTGTCTGGAAGAAGTATCCATAGTGCACAGAAAGGACCCCACGGCTTTGACCATATTCCACTaGTGCAAGAGGAAGCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: FCNCLEEVSIVHRKDPTALTIFH*CKRKQS Trigger: GCTCTGCTTCCTCTTGCAGCAGTGGAATATGGTCAA...AGCCGTGGGGTCCTTTCTGTGCACTATGGATACTTCTTCCAGACAGTTACAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
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| 3UTR-3UTR GCA 90 bp | GTGACTCAAGGAAGTGGAAAAATGTCACACAGCTTCCATCAATCACTTCATTTTACTGCAGAGCTCCAGTaGTCCTGTGGGGTGTTCCCG | + |
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Preference number: 2 (lower is better) Translates to: VTQGSGKMSHSFHQSLHFTAELQ*SCGVFP Trigger: CGGGAACACCCCACAGGAGCACTGGAGCTCTGCAGT...AAAATGAAGTGATTGATGGAAGCTGTGTGACATTTTTCCACTTCCTTGAGTCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000007757.15 |
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| 3UTR-3UTR GCA 90 bp | CTGCAGCGAGAACCAAAATCTGGAATTCTTGATGGCCACAGCCCCACACAGGGCTGTAAATCAAGCAGTTaGAAGATCTGCACATATGAG | + |
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Preference number: 2 (lower is better) Translates to: LQREPKSGILDGHSPTQGCKSSS*KICTYE Trigger: CTCATATGTGCAGATCTTGCAACTGCTTGATTTACA...GCCCTGTGTGGGGCTGTGGCCATCAAGAATTCCAGATTTTGGTTCTCGCTGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007757.15 |
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| 3UTR-3UTR TCA 90 bp | GTGACTCAAGGAAGTGGAAAAATGTCACACAGCTTCCATCAATCACTTCATTTTTGGGAAGCTTTCAGTTaGCCATATTCCACTGCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: VTQGSGKMSHSFHQSLHFWEAFS*PYSTAA Trigger: TGCAGCAGTGGAATATGGTCAACTGAAAGCTTCCCA...AAAATGAAGTGATTGATGGAAGCTGTGTGACATTTTTCCACTTCCTTGAGTCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000007757.15 |
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| 3UTR-3UTR GCA 90 bp | AAAGTAGACTACACAACATTCTGTAACTGTCTGGAAGAAGTATCCATAGTGCACTTGACCATATTCCACTaGTGCAAGAGGAAGCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: KVDYTTFCNCLEEVSIVHLTIFH*CKRKQS Trigger: GCTCTGCTTCCTCTTGCAGCAGTGGAATATGGTCAA...GTGCACTATGGATACTTCTTCCAGACAGTTACAGAATGTTGTGTAGTCTACTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
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| 3UTR CAA 90 bp | CTATTAGTTGCTGCTTCTCCTAGTATCAACGTGGCACTGAATTCATaGCTACCATGTAAATCAAGCAGTTGCAAGATCTGCACATATGAG | + |
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Preference number: 2 (lower is better) Translates to: LLVAASPSINVALNS*LPCKSSSCKICTYE Trigger: CTCATATGTGCAGATCTTGCAACTGCTTGATTTACATGGTAGCAATGAATTCAGTGCCACGTTGATACTAGGAGAAGCAGCAACTAATAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007757.15 |
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| 3UTR-3UTR TCA 90 bp | GTGACTCAAGGAAGTGGAAAAATGTCACACAGCTTCCATCAATCACTTCATTTTGGCATGAAGACTGAATaGCATCTATCACAAAAACCC | + |
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Preference number: 2 (lower is better) Translates to: VTQGSGKMSHSFHQSLHFGMKTE*HLSQKP Trigger: GGGTTTTTGTGATAGATGTCATTCAGTCTTCATGCC...AAAATGAAGTGATTGATGGAAGCTGTGTGACATTTTTCCACTTCCTTGAGTCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000007757.15 |
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| 3UTR CCA 72 bp | ATCCATAGTGCACAGAAAGGACCCCACGGCTGCCTCTaGGCCCAGAGAAACCCTGGGAAGCTTTCAGTTGAC | + |
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Preference number: 3 (lower is better) Translates to: IHSAQKGPHGCL*AQRNPGKLSVD Trigger: GTCAACTGAAAGCTTCCCAGGGTTTCTCTGGGCCCAGAGGCAGCCGTGGGGTCCTTTCTGTGCACTATGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
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| 3UTR-3UTR CAA 90 bp | CAGGCTAAACGTCTCAACTGCAGAGCTCCAGTGCTCCTGTGGGGTGTTCCCGCAATCAATGCTACAGCCTaGCCTCAGTGGTTCAAGCAC | + |
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Preference number: 3 (lower is better) Translates to: QAKRLNCRAPVLLWGVPAINATA*PQWFKH Trigger: GTGCTTGAACCACTGAGGCAAGGCTGTAGCATTGAT...TGCGGGAACACCCCACAGGAGCACTGGAGCTCTGCAGTTGAGACGTTTAGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 |
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| 3UTR TCA 72 bp | TGCTGCAAGAGGAAGCAGAGCCCTCTGTTCTCTCAGTaGGGTAGAACAACCAGCCTCCTAAACACCCAGGAG | + |
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Preference number: 3 (lower is better) Translates to: CCKRKQSPLFSQ*GRTTSLLNTQE Trigger: CTCCTGGGTGTTTAGGAGGCTGGTTGTTCTACCTCACTGAGAGAACAGAGGGCTCTGCTTCCTCTTGCAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
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| 3UTR CCA 72 bp | GCTAAACGTCTCAACTGCAGAGCTCCAGTGCTCCTGTaGGGTGTTCCCGCATGGCAGTCACTGCTTATCAAT | + |
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Preference number: 3 (lower is better) Translates to: AKRLNCRAPVLL*GVPAWQSLLIN Trigger: ATTGATAAGCAGTGACTGCCATGCGGGAACACCCCACAGGAGCACTGGAGCTCTGCAGTTGAGACGTTTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 |
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| 3UTR TCA 72 bp | TACTGTCCTACTAGAGACACAGCTGGCCACTACTTCTaGGGCCAACTTCCACTGCCACTTAGCTGTCACCCT | + |
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Preference number: 3 (lower is better) Translates to: YCPTRDTAGHYF*GQLPLPLSCHP Trigger: AGGGTGACAGCTAAGTGGCAGTGGAAGTTGGCCTCAGAAGTAGTGGCCAGCTGTGTCTCTAGTAGGACAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007757.15 |
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| 3UTR TCA 72 bp | CTTAAGTCTGCAGCGAGAACCAAAATCTGGAATTCTTaGTGGCCACAGCCCCACACAGGGCCTCAAGGCACT | + |
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Preference number: 3 (lower is better) Translates to: LKSAARTKIWNS*WPQPHTGPQGT Trigger: AGTGCCTTGAGGCCCTGTGTGGGGCTGTGGCCATCAAGAATTCCAGATTTTGGTTCTCGCTGCAGACTTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007757.15 |
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| 3UTR CCA 72 bp | CAGTCACTGCTTATCAATGCTACAGCCTTGCCTCAGTaGTTCAAGCACATCTGGGTAGGAGAAAGGCATGAA | + |
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Preference number: 3 (lower is better) Translates to: QSLLINATALPQ*FKHIWVGERHE Trigger: TTCATGCCTTTCTCCTACCCAGATGTGCTTGAACCACTGAGGCAAGGCTGTAGCATTGATAAGCAGTGACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 |
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| 3UTR TCA 72 bp | ACCCCAATTTGCAGATCACTCCCTCATAACACCCAGTaGCTCAAGGAAGTGGAAAAATGTCACACAGCTTCC | + |
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Preference number: 3 (lower is better) Translates to: TPICRSLPHNTQ*LKEVEKCHTAS Trigger: GGAAGCTGTGTGACATTTTTCCACTTCCTTGAGTCACTGGGTGTTATGAGGGAGTGATCTGCAAATTGGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007757.15 |
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| 3UTR TCA 72 bp | CTTCTGGAGTACTACTGTAGTAGCAGGATTACAGGCTaGGCTTCATGCCTTTACTGTCCTACTAGAGACACA | + |
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Preference number: 3 (lower is better) Translates to: LLEYYCSSRITG*ASCLYCPTRDT Trigger: TGTGTCTCTAGTAGGACAGTAAAGGCATGAAGCTCAGCCTGTAATCCTGCTACTACAGTAGTACTCCAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007757.15 |
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| 3UTR CCA 72 bp | GATCACTCCCTCATAACACCCAGTGACTCAAGGAAGTaGAAAAATGTCACACAGCTTCCATCAATCACTTCA | + |
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Preference number: 3 (lower is better) Translates to: DHSLITPSDSRK*KNVTQLPSITS Trigger: TGAAGTGATTGATGGAAGCTGTGTGACATTTTTCCACTTCCTTGAGTCACTGGGTGTTATGAGGGAGTGATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007757.15 |
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| 3UTR TCA 72 bp | TCAGTGGTTCAAGCACATCTGGGTAGGAGAAAGGCATaGAGACTGAATGACATCTATCACAAAAACCCTCAA | + |
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Preference number: 3 (lower is better) Translates to: SVVQAHLGRRKA*RLNDIYHKNPQ Trigger: TTGAGGGTTTTTGTGATAGATGTCATTCAGTCTTCATGCCTTTCTCCTACCCAGATGTGCTTGAACCACTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 |
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| 3UTR-3UTR CAA 90 bp | ATGTTCAACATCTCGTCTCAAGCAATGATGATAACATTTCCCCGCCCAGAATATAAGCACTGTACATGTTaGGAGTGCCACTTCACTTCT | + |
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Preference number: 3 (lower is better) Translates to: MFNISSQAMMITFPRPEYKHCTC*ECHFTS Trigger: AGAAGTGAAGTGGCACTCCAAACATGTACAGTGCTT...ATATTCTGGGCGGGGAAATGTTATCATCATTGCTTGAGACGAGATGTTGAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007757.15 |
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| 3UTR CCA 72 bp | TGGCTAAACACTAAAGGTTATTTTGACCTTTTTATCTaGGGATTGGTATCACTATGTTCAACATCTCGTCTC | + |
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Preference number: 3 (lower is better) Translates to: WLNTKGYFDLFI*GLVSLCSTSRL Trigger: GAGACGAGATGTTGAACATAGTGATACCAATCCCCAGATAAAAAGGTCAAAATAACCTTTAGTGTTTAGCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007757.15 |
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| 3UTR TCA 72 bp | GGACTGACTTTGACATTTAATATGACCAAGAATATATaGAGAGAGCCTCTACTCAGAATAGCTATTAGTTGC | + |
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Preference number: 3 (lower is better) Translates to: GLTLTFNMTKNI*REPLLRIAISC Trigger: GCAACTAATAGCTATTCTGAGTAGAGGCTCTCTTCATATATTCTTGGTCATATTAAATGTCAAAGTCAGTCC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007757.15 |
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| 3UTR GCA 72 bp | GCACTGAATTCATTGCTACCATGTAAATCAAGCAGTTaGAAGATCTGCACATATGAGATAAAAAGACTGAAT | + |
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Preference number: 3 (lower is better) Translates to: ALNSLLPCKSSS*KICTYEIKRLN Trigger: ATTCAGTCTTTTTATCTCATATGTGCAGATCTTGCAACTGCTTGATTTACATGGTAGCAATGAATTCAGTGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007757.15 |
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| CDS-3UTR CCA 90 bp | CATAGTGCACAGAAAGGACCCCACGGCTGCCTCTGGGCCCAGAGAAACCCTGGGGAGCTGCGGACGACGTaGAGCAGCGGCCGCCGCCTC | + |
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Preference number: 4 (lower is better) Translates to: HSAQKGPHGCLWAQRNPGELRTT*SSGRRL Trigger: GAGGCGGCGGCCGCTGCTCCACGTCGTCCGCAGCTC...CCCAGGGTTTCTCTGGGCCCAGAGGCAGCCGTGGGGTCCTTTCTGTGCACTATG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 |
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| CDS-3UTR CCA 90 bp | GCCCAGAGAAACCCTGGGAAGCTTTCAGTTGACCATATTCCACTGCTGCAAGAGGAGCTGCGGACGACGTaGAGCAGCGGCCGCCGCCTC | + |
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Preference number: 4 (lower is better) Translates to: AQRNPGKLSVDHIPLLQEELRTT*SSGRRL Trigger: GAGGCGGCGGCCGCTGCTCCACGTCGTCCGCAGCTC...CTCTTGCAGCAGTGGAATATGGTCAACTGAAAGCTTCCCAGGGTTTCTCTGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 |
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| CDS-3UTR CCA 90 bp | CATAGTGCACAGAAAGGACCCCACGGCTGCCTCTGGGCCCAGAGAAACCCTGGGGCAGACGAAGCAGACTaGACCAGCAATGACAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: HSAQKGPHGCLWAQRNPGADEAD*TSNDSC Trigger: GCAGCTGTCATTGCTGGTCCAGTCTGCTTCGTCTGC...CCCAGGGTTTCTCTGGGCCCAGAGGCAGCCGTGGGGTCCTTTCTGTGCACTATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
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| CDS-3UTR TCA 90 bp | GTGCACAGAAAGGACCCCACGGCTGCCTCTGGGCCCAGAGAAACCCTGGGAAGCTGGTGCCCTCTGAAATaGAAGGGCGATCTAGTGATG | + |
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Preference number: 4 (lower is better) Translates to: VHRKDPTAASGPRETLGSWCPLK*KGDLVM Trigger: CATCACTAGATCGCCCTTTCATTTCAGAGGGCACCA...GCTTCCCAGGGTTTCTCTGGGCCCAGAGGCAGCCGTGGGGTCCTTTCTGTGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
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| CDS-3UTR TCA 90 bp | CATAGTGCACAGAAAGGACCCCACGGCTGCCTCTGGGCCCAGAGAAACCCTGGGTGCCTCTCGGAACCATaGACGCTCTTCTCTAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: HSAQKGPHGCLWAQRNPGCLSEP*TLFSRR Trigger: TCTTCTAGAGAAGAGCGTTCATGGTTCCGAGAGGCA...CCCAGGGTTTCTCTGGGCCCAGAGGCAGCCGTGGGGTCCTTTCTGTGCACTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
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| CDS-3UTR GCA 90 bp | CATAGTGCACAGAAAGGACCCCACGGCTGCCTCTGGGCCCAGAGAAACCCTGGGCAAAGCTGTCAGCCTTaGTGCTCCATTGGCATACCA | + |
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Preference number: 4 (lower is better) Translates to: HSAQKGPHGCLWAQRNPGQSCQP*CSIGIP Trigger: TGGTATGCCAATGGAGCAGCAAGGCTGACAGCTTTG...CCCAGGGTTTCTCTGGGCCCAGAGGCAGCCGTGGGGTCCTTTCTGTGCACTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
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| CDS-3UTR GCA 90 bp | CATAGTGCACAGAAAGGACCCCACGGCTGCCTCTGGGCCCAGAGAAACCCTGGGGACCATCAGCATAAGTaGAATGCAGACGAAGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: HSAQKGPHGCLWAQRNPGDHQHK*NADEAD Trigger: GTCTGCTTCGTCTGCATTGCACTTATGCTGATGGTC...CCCAGGGTTTCTCTGGGCCCAGAGGCAGCCGTGGGGTCCTTTCTGTGCACTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
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| CDS-3UTR TCA 90 bp | AAGGACCCCACGGCTGCCTCTGGGCCCAGAGAAACCCTGGGAAGCTTTCAGTTGTGTGGTCTCAGTGACTaGGACAAAGCAAAGACCATC | + |
|
Preference number: 4 (lower is better) Translates to: KDPTAASGPRETLGSFQLCGLSD*DKAKTI Trigger: GATGGTCTTTGCTTTGTCTCAGTCACTGAGACCACA...CAACTGAAAGCTTCCCAGGGTTTCTCTGGGCCCAGAGGCAGCCGTGGGGTCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 |
||
| CDS-3UTR TCA 90 bp | GGGCCCAGAGAAACCCTGGGAAGCTTTCAGTTGACCATATTCCACTGCTGCAAGAGACTGGACCAGCAATaGCAGCTGCCAGCTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GPRETLGSFQLTIFHCCKRLDQQ*QLPAPQ Trigger: CTGTGGAGCTGGCAGCTGTCATTGCTGGTCCAGTCT...CTTGCAGCAGTGGAATATGGTCAACTGAAAGCTTCCCAGGGTTTCTCTGGGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR TCA 90 bp | AAGGACCCCACGGCTGCCTCTGGGCCCAGAGAAACCCTGGGAAGCTTTCAGTTGATGCTCATGATAATCTaGCACCAACCACAGCTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: KDPTAASGPRETLGSFQLMLMII*HQPQLR Trigger: ACGCAGCTGTGGTTGGTGTCAGATTATCATGAGCAT...CAACTGAAAGCTTCCCAGGGTTTCTCTGGGCCCAGAGGCAGCCGTGGGGTCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR CCA 90 bp | GTGCACAGAAAGGACCCCACGGCTGCCTCTGGGCCCAGAGAAACCCTGGGAAGCATAGCTGGTTTTCCTTaGGTACCAACAATCTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: VHRKDPTAASGPRETLGSIAGFP*VPTISM Trigger: CATGGAGATTGTTGGTACCCAAGGAAAACCAGCTAT...GCTTCCCAGGGTTTCTCTGGGCCCAGAGGCAGCCGTGGGGTCCTTTCTGTGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR TCA 90 bp | CAGGCTAAACGTCTCAACTGCAGAGCTCCAGTGCTCCTGTGGGGTGTTCCCGCATGTCTGTGGTCTCAGTaGCTGAGACAAAGCAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: QAKRLNCRAPVLLWGVPACLWSQ*LRQSKD Trigger: GTCTTTGCTTTGTCTCAGTCACTGAGACCACAGACA...TGCGGGAACACCCCACAGGAGCACTGGAGCTCTGCAGTTGAGACGTTTAGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 |
||
| CDS-3UTR TCA 90 bp | GCCCAGAGAAACCCTGGGAAGCTTTCAGTTGACCATATTCCACTGCTGCAAGAGAGACTGGACCAGCAATaGCAGCTGCCAGCTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: AQRNPGKLSVDHIPLLQERLDQQ*QLPAPQ Trigger: CTGTGGAGCTGGCAGCTGTCATTGCTGGTCCAGTCT...CTCTTGCAGCAGTGGAATATGGTCAACTGAAAGCTTCCCAGGGTTTCTCTGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR TCA 90 bp | GGGGTGTTCCCGCATGGCAGTCACTGCTTATCAATGCTACAGCCTTGCCTCAGTTTTGGCACACGGTGGTaGATGACAGTGCGGTTATGG | + |
|
Preference number: 4 (lower is better) Translates to: GVFPHGSHCLSMLQPCLSFGTRW*MTVRLW Trigger: CCATAACCGCACTGTCATTCACCACCGTGTGCCAAA...ACTGAGGCAAGGCTGTAGCATTGATAAGCAGTGACTGCCATGCGGGAACACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 |
||
| CDS-3UTR TCA 90 bp | GTGCACAGAAAGGACCCCACGGCTGCCTCTGGGCCCAGAGAAACCCTGGGAAGCAGATGTCAGCGCGTTTaGAGGATTCAAAATGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VHRKDPTAASGPRETLGSRCQRV*RIQNVS Trigger: TGAAACATTTTGAATCCTTCAAACGCGCTGACATCT...GCTTCCCAGGGTTTCTCTGGGCCCAGAGGCAGCCGTGGGGTCCTTTCTGTGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR CCA 90 bp | AAGGACCCCACGGCTGCCTCTGGGCCCAGAGAAACCCTGGGAAGCTTTCAGTTGTCCTTTGTACAGAGGTaGCAGAAACACTGTAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: KDPTAASGPRETLGSFQLSFVQR*QKHCNA Trigger: GGCATTACAGTGTTTCTGCCACCTCTGTACAAAGGA...CAACTGAAAGCTTCCCAGGGTTTCTCTGGGCCCAGAGGCAGCCGTGGGGTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 |
||
| CDS-3UTR CCA 90 bp | GGGCCCAGAGAAACCCTGGGAAGCTTTCAGTTGACCATATTCCACTGCTGCAAGGCAGACGAAGCAGACTaGACCAGCAATGACAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GPRETLGSFQLTIFHCCKADEAD*TSNDSC Trigger: GCAGCTGTCATTGCTGGTCCAGTCTGCTTCGTCTGC...CTTGCAGCAGTGGAATATGGTCAACTGAAAGCTTCCCAGGGTTTCTCTGGGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR CCA 90 bp | CATAGTGCACAGAAAGGACCCCACGGCTGCCTCTGGGCCCAGAGAAACCCTGGGATAGCTGGTTTTCCTTaGGTACCAACAATCTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: HSAQKGPHGCLWAQRNPGIAGFP*VPTISM Trigger: CATGGAGATTGTTGGTACCCAAGGAAAACCAGCTAT...CCCAGGGTTTCTCTGGGCCCAGAGGCAGCCGTGGGGTCCTTTCTGTGCACTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR TCA 90 bp | TCTGGAAGAAGTATCCATAGTGCACAGAAAGGACCCCACGGCTGCCTCTGGGCCTGTCTGTGGTCTCAGTaGCTGAGACAAAGCAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SGRSIHSAQKGPHGCLWACLWSQ*LRQSKD Trigger: GTCTTTGCTTTGTCTCAGTCACTGAGACCACAGACA...GGCCCAGAGGCAGCCGTGGGGTCCTTTCTGTGCACTATGGATACTTCTTCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 |
||
| CDS-3UTR TCA 90 bp | CATAGTGCACAGAAAGGACCCCACGGCTGCCTCTGGGCCCAGAGAAACCCTGGGTTATTGCAGTGGTCCTaGTTGCAGCAATATGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: HSAQKGPHGCLWAQRNPGLLQWS*LQQYVV Trigger: TACAACATATTGCTGCAATCAGGACCACTGCAATAA...CCCAGGGTTTCTCTGGGCCCAGAGGCAGCCGTGGGGTCCTTTCTGTGCACTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 |
||
| CDS-3UTR TCA 90 bp | TCTGGAAGAAGTATCCATAGTGCACAGAAAGGACCCCACGGCTGCCTCTGGGCCATGCTCATGATAATCTaGCACCAACCACAGCTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: SGRSIHSAQKGPHGCLWAMLMII*HQPQLR Trigger: ACGCAGCTGTGGTTGGTGTCAGATTATCATGAGCAT...GGCCCAGAGGCAGCCGTGGGGTCCTTTCTGTGCACTATGGATACTTCTTCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR TCA 90 bp | AACCAGCCTCCTAAACACCCAGGAGCAGATATGAAGAGAGCAGAGTTCCCACGGAGGACCAAGGCCAGCTaGCTGCTTTTCTGTAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NQPPKHPGADMKRAEFPRRTKAS*LLFCSW Trigger: CCAACTACAGAAAAGCAGTCAGCTGGCCTTGGTCCT...CCGTGGGAACTCTGCTCTCTTCATATCTGCTCCTGGGTGTTTAGGAGGCTGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044234.14 |
||
| CDS-3UTR GCA 90 bp | GTGCACAGAAAGGACCCCACGGCTGCCTCTGGGCCCAGAGAAACCCTGGGAAGCGTCTTTGTTGTCTGCTaGTATAAATCCCAGGATATT | + |
|
Preference number: 4 (lower is better) Translates to: VHRKDPTAASGPRETLGSVFVVC*YKSQDI Trigger: AATATCCTGGGATTTATAGCAGCAGACAACAAAGAC...GCTTCCCAGGGTTTCTCTGGGCCCAGAGGCAGCCGTGGGGTCCTTTCTGTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR GCA 90 bp | GTGCACAGAAAGGACCCCACGGCTGCCTCTGGGCCCAGAGAAACCCTGGGAAGCATTGTCTTTGTTGTCTaGTGCTATAAATCCCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VHRKDPTAASGPRETLGSIVFVV*CYKSQD Trigger: ATCCTGGGATTTATAGCAGCAGACAACAAAGACAAT...GCTTCCCAGGGTTTCTCTGGGCCCAGAGGCAGCCGTGGGGTCCTTTCTGTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR CCA 90 bp | TCTGGAAGAAGTATCCATAGTGCACAGAAAGGACCCCACGGCTGCCTCTGGGCCTGGATCCTCTTCATTTaGCACACGGTGGTGAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: SGRSIHSAQKGPHGCLWAWILFI*HTVVND Trigger: GTCATTCACCACCGTGTGCCAAATGAAGAGGATCCA...GGCCCAGAGGCAGCCGTGGGGTCCTTTCTGTGCACTATGGATACTTCTTCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR CCA 90 bp | GTGCACAGAAAGGACCCCACGGCTGCCTCTGGGCCCAGAGAAACCCTGGGAAGCGATTTCAAATCTCTATaGGCAATAGCTGGTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VHRKDPTAASGPRETLGSDFKSL*AIAGFP Trigger: AGGAAAACCAGCTATTGCCCATAGAGATTTGAAATC...GCTTCCCAGGGTTTCTCTGGGCCCAGAGGCAGCCGTGGGGTCCTTTCTGTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR CCA 90 bp | AAGGACCCCACGGCTGCCTCTGGGCCCAGAGAAACCCTGGGAAGCTTTCAGTTGTTGATGCCTTCCTGTTaGCTGAGTTGTGACAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: KDPTAASGPRETLGSFQLLMPSC*LSCDNV Trigger: AACATTGTCACAACTCAGCCAACAGGAAGGCATCAA...CAACTGAAAGCTTCCCAGGGTTTCTCTGGGCCCAGAGGCAGCCGTGGGGTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR GCA 90 bp | CAGGCTAAACGTCTCAACTGCAGAGCTCCAGTGCTCCTGTGGGGTGTTCCCGCACTCCAAACCGACCTTTaGCAATGCTTTCTTGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: QAKRLNCRAPVLLWGVPALQTDL*QCFLVT Trigger: TGTTACAAGAAAGCATTGGCAAAGGTCGGTTTGGAG...TGCGGGAACACCCCACAGGAGCACTGGAGCTCTGCAGTTGAGACGTTTAGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 |
||
| CDS-3UTR GCA 90 bp | AACCAGCCTCCTAAACACCCAGGAGCAGATATGAAGAGAGCAGAGTTCCCACGGCAAAGCTGTCAGCCTTaGTGCTCCATTGGCATACCA | + |
|
Preference number: 4 (lower is better) Translates to: NQPPKHPGADMKRAEFPRQSCQP*CSIGIP Trigger: TGGTATGCCAATGGAGCAGCAAGGCTGACAGCTTTG...CCGTGGGAACTCTGCTCTCTTCATATCTGCTCCTGGGTGTTTAGGAGGCTGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR TCA 90 bp | CAGCTCCTTCACCCTTACAGAAGGTCAACAGCACAGCAGCTCCCTAAGGGCTGGCTGGCAATTGTTCTTTaGACAAGCAGTGGTAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: QLLHPYRRSTAQQLPKGWLAIVL*TSSGKP Trigger: AGGTTTACCACTGCTTGTTCAAAGAACAATTGCCAG...CCAGCCCTTAGGGAGCTGCTGTGCTGTTGACCTTCTGTAAGGGTGAAGGAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 |
||
| CDS-3UTR TCA 90 bp | CAGGCTAAACGTCTCAACTGCAGAGCTCCAGTGCTCCTGTGGGGTGTTCCCGCAAGATGTCAGCGCGTTTaGAGGATTCAAAATGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QAKRLNCRAPVLLWGVPARCQRV*RIQNVS Trigger: TGAAACATTTTGAATCCTTCAAACGCGCTGACATCT...TGCGGGAACACCCCACAGGAGCACTGGAGCTCTGCAGTTGAGACGTTTAGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 |
||
| CDS-3UTR GCA 90 bp | AACCAGCCTCCTAAACACCCAGGAGCAGATATGAAGAGAGCAGAGTTCCCACGGGACCATCAGCATAAGTaGAATGCAGACGAAGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: NQPPKHPGADMKRAEFPRDHQHK*NADEAD Trigger: GTCTGCTTCGTCTGCATTGCACTTATGCTGATGGTC...CCGTGGGAACTCTGCTCTCTTCATATCTGCTCCTGGGTGTTTAGGAGGCTGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR CCA 90 bp | TTCTGTAACTGTCTGGAAGAAGTATCCATAGTGCACAGAAAGGACCCCACGGCTGCAGACGAAGCAGACTaGACCAGCAATGACAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FCNCLEEVSIVHRKDPTAADEAD*TSNDSC Trigger: GCAGCTGTCATTGCTGGTCCAGTCTGCTTCGTCTGC...AGCCGTGGGGTCCTTTCTGTGCACTATGGATACTTCTTCCAGACAGTTACAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR CCA 90 bp | AACCAGCCTCCTAAACACCCAGGAGCAGATATGAAGAGAGCAGAGTTCCCACGGTGGATCCTCTTCATTTaGCACACGGTGGTGAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: NQPPKHPGADMKRAEFPRWILFI*HTVVND Trigger: GTCATTCACCACCGTGTGCCAAATGAAGAGGATCCA...CCGTGGGAACTCTGCTCTCTTCATATCTGCTCCTGGGTGTTTAGGAGGCTGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR TCA 90 bp | CAGAGAAACCCTGGGAAGCTTTCAGTTGACCATATTCCACTGCTGCAAGAGGAATTTGGCACACGGTGGTaGATGACAGTGCGGTTATGG | + |
|
Preference number: 4 (lower is better) Translates to: QRNPGKLSVDHIPLLQEEFGTRW*MTVRLW Trigger: CCATAACCGCACTGTCATTCACCACCGTGTGCCAAA...TTCCTCTTGCAGCAGTGGAATATGGTCAACTGAAAGCTTCCCAGGGTTTCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR GCA 90 bp | TTCTGTAACTGTCTGGAAGAAGTATCCATAGTGCACAGAAAGGACCCCACGGCTGACACCAACCACAGCTaGGTCCATGTCCCATTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FCNCLEEVSIVHRKDPTADTNHS*VHVPLS Trigger: AGACAATGGGACATGGACGCAGCTGTGGTTGGTGTC...AGCCGTGGGGTCCTTTCTGTGCACTATGGATACTTCTTCCAGACAGTTACAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR CCA 90 bp | GGGCCCAGAGAAACCCTGGGAAGCTTTCAGTTGACCATATTCCACTGCTGCAAGTCCTTTGTACAGAGGTaGCAGAAACACTGTAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: GPRETLGSFQLTIFHCCKSFVQR*QKHCNA Trigger: GGCATTACAGTGTTTCTGCCACCTCTGTACAAAGGA...CTTGCAGCAGTGGAATATGGTCAACTGAAAGCTTCCCAGGGTTTCTCTGGGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 |
||
| CDS-3UTR CCA 90 bp | TGTCTGGAAGAAGTATCCATAGTGCACAGAAAGGACCCCACGGCTGCCTCTGGGATAGCTGGTTTTCCTTaGGTACCAACAATCTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: CLEEVSIVHRKDPTAASGIAGFP*VPTISM Trigger: CATGGAGATTGTTGGTACCCAAGGAAAACCAGCTAT...CCCAGAGGCAGCCGTGGGGTCCTTTCTGTGCACTATGGATACTTCTTCCAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR GCA 90 bp | AACCAGCCTCCTAAACACCCAGGAGCAGATATGAAGAGAGCAGAGTTCCCACGGACCGACCTTTGCCAATaGTTTCTTGTAACACAATGG | + |
|
Preference number: 4 (lower is better) Translates to: NQPPKHPGADMKRAEFPRTDLCQ*FLVTQW Trigger: CCATTGTGTTACAAGAAAGCATTGGCAAAGGTCGGT...CCGTGGGAACTCTGCTCTCTTCATATCTGCTCCTGGGTGTTTAGGAGGCTGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR GCA 90 bp | AACCAGCCTCCTAAACACCCAGGAGCAGATATGAAGAGAGCAGAGTTCCCACGGCTCCAAACCGACCTTTaGCAATGCTTTCTTGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: NQPPKHPGADMKRAEFPRLQTDL*QCFLVT Trigger: TGTTACAAGAAAGCATTGGCAAAGGTCGGTTTGGAG...CCGTGGGAACTCTGCTCTCTTCATATCTGCTCCTGGGTGTTTAGGAGGCTGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR GCA 90 bp | CAGAGAAACCCTGGGAAGCTTTCAGTTGACCATATTCCACTGCTGCAAGAGGAAATGGGCAAGACCACTTaGTGTGGACAGAGCAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QRNPGKLSVDHIPLLQEEMGKTT*CGQSKL Trigger: AAGCTTGCTCTGTCCACAGCAAGTGGTCTTGCCCAT...TTCCTCTTGCAGCAGTGGAATATGGTCAACTGAAAGCTTCCCAGGGTTTCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR CCA 90 bp | TTCTGTAACTGTCTGGAAGAAGTATCCATAGTGCACAGAAAGGACCCCACGGCTTGGATCCTCTTCATTTaGCACACGGTGGTGAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: FCNCLEEVSIVHRKDPTAWILFI*HTVVND Trigger: GTCATTCACCACCGTGTGCCAAATGAAGAGGATCCA...AGCCGTGGGGTCCTTTCTGTGCACTATGGATACTTCTTCCAGACAGTTACAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR CCA 90 bp | TGTCTGGAAGAAGTATCCATAGTGCACAGAAAGGACCCCACGGCTGCCTCTGGGTATCAATTGTATCTGTaGCAGAATCATGTCTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: CLEEVSIVHRKDPTAASGYQLYL*QNHVSQ Trigger: CTGTGAGACATGATTCTGCCACAGATACAATTGATA...CCCAGAGGCAGCCGTGGGGTCCTTTCTGTGCACTATGGATACTTCTTCCAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR CCA 90 bp | AACCAGCCTCCTAAACACCCAGGAGCAGATATGAAGAGAGCAGAGTTCCCACGGGCCTACTCTGTGGTTTaGAGCAATATCAATTGTATC | + |
|
Preference number: 4 (lower is better) Translates to: NQPPKHPGADMKRAEFPRAYSVV*SNINCI Trigger: GATACAATTGATATTGCTCCAAACCACAGAGTAGGC...CCGTGGGAACTCTGCTCTCTTCATATCTGCTCCTGGGTGTTTAGGAGGCTGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR CCA 90 bp | GGGCCCAGAGAAACCCTGGGAAGCTTTCAGTTGACCATATTCCACTGCTGCAAGGCCTACTCTGTGGTTTaGAGCAATATCAATTGTATC | + |
|
Preference number: 4 (lower is better) Translates to: GPRETLGSFQLTIFHCCKAYSVV*SNINCI Trigger: GATACAATTGATATTGCTCCAAACCACAGAGTAGGC...CTTGCAGCAGTGGAATATGGTCAACTGAAAGCTTCCCAGGGTTTCTCTGGGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR CCA 90 bp | TCTGGAAGAAGTATCCATAGTGCACAGAAAGGACCCCACGGCTGCCTCTGGGCCCTGCTTTTCTGTAGTTaGGAGTTCTATTTTATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SGRSIHSAQKGPHGCLWALLFCS*EFYFIA Trigger: TGCAATAAAATAGAACTCCCAACTACAGAAAAGCAG...GGCCCAGAGGCAGCCGTGGGGTCCTTTCTGTGCACTATGGATACTTCTTCCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044234.14 |
||
| CDS-3UTR TCA 90 bp | GTGACTCAAGGAAGTGGAAAAATGTCACACAGCTTCCATCAATCACTTCATTTTAGACTGGACCAGCAATaGCAGCTGCCAGCTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: VTQGSGKMSHSFHQSLHFRLDQQ*QLPAPQ Trigger: CTGTGGAGCTGGCAGCTGTCATTGCTGGTCCAGTCT...AAAATGAAGTGATTGATGGAAGCTGTGTGACATTTTTCCACTTCCTTGAGTCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007757.15 |
||
| CDS-3UTR TCA 90 bp | AGGACTTTGAAAGCCACACAAGCCCTGCAAAGATTTGACAGCACTGAAGTAAAATTTGGCACACGGTGGTaGATGACAGTGCGGTTATGG | + |
|
Preference number: 4 (lower is better) Translates to: RTLKATQALQRFDSTEVKFGTRW*MTVRLW Trigger: CCATAACCGCACTGTCATTCACCACCGTGTGCCAAA...TTTTACTTCAGTGCTGTCAAATCTTTGCAGGGCTTGTGTGGCTTTCAAAGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007757.15 |
||
| CDS-3UTR TCA 90 bp | ACAACATTCTGTAACTGTCTGGAAGAAGTATCCATAGTGCACAGAAAGGACCCCTGGTGCCCTCTGAAATaGAAGGGCGATCTAGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: TTFCNCLEEVSIVHRKDPWCPLK*KGDLVM Trigger: CATCACTAGATCGCCCTTTCATTTCAGAGGGCACCA...GGGGTCCTTTCTGTGCACTATGGATACTTCTTCCAGACAGTTACAGAATGTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR TCA 90 bp | ACAACATTCTGTAACTGTCTGGAAGAAGTATCCATAGTGCACAGAAAGGACCCCTGCCTCTCGGAACCATaGACGCTCTTCTCTAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TTFCNCLEEVSIVHRKDPCLSEP*TLFSRR Trigger: TCTTCTAGAGAAGAGCGTTCATGGTTCCGAGAGGCA...GGGGTCCTTTCTGTGCACTATGGATACTTCTTCCAGACAGTTACAGAATGTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR GCA 90 bp | ACAACATTCTGTAACTGTCTGGAAGAAGTATCCATAGTGCACAGAAAGGACCCCCAAAGCTGTCAGCCTTaGTGCTCCATTGGCATACCA | + |
|
Preference number: 4 (lower is better) Translates to: TTFCNCLEEVSIVHRKDPQSCQP*CSIGIP Trigger: TGGTATGCCAATGGAGCAGCAAGGCTGACAGCTTTG...GGGGTCCTTTCTGTGCACTATGGATACTTCTTCCAGACAGTTACAGAATGTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR CCA 90 bp | GGGCCCAGAGAAACCCTGGGAAGCTTTCAGTTGACCATATTCCACTGCTGCAAGTATCAATTGTATCTGTaGCAGAATCATGTCTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GPRETLGSFQLTIFHCCKYQLYL*QNHVSQ Trigger: CTGTGAGACATGATTCTGCCACAGATACAATTGATA...CTTGCAGCAGTGGAATATGGTCAACTGAAAGCTTCCCAGGGTTTCTCTGGGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| 3UTR CAA 72 bp | CTTACTGGTGTAGCACAACCCTACTGTGAAGGTGTGTaGTGTTCAGAGTGTGAAGGAGCTGTGCACAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: LTGVAQPYCEGV*CSECEGAVHKY Trigger: GTATTTGTGCACAGCTCCTTCACACTCTGAACACAACACACCTTCACAGTAGGGTTGTGCTACACCAGTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 |
||
| CDS-3UTR TCA 90 bp | CCAGTGACTCAAGGAAGTGGAAAAATGTCACACAGCTTCCATCAATCACTTCATTGCCTCTCGGAACCATaGACGCTCTTCTCTAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PVTQGSGKMSHSFHQSLHCLSEP*TLFSRR Trigger: TCTTCTAGAGAAGAGCGTTCATGGTTCCGAGAGGCA...ATGAAGTGATTGATGGAAGCTGTGTGACATTTTTCCACTTCCTTGAGTCACTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007757.15 |
||
| CDS-3UTR GCA 90 bp | CATCAATCACTTCATTTTAGGTCTCAAAAGCAGCTCTTAGGTCCAAAGGCTGGAATGGGCAAGACCACTTaGTGTGGACAGAGCAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HQSLHFRSQKQLLGPKAGMGKTT*CGQSKL Trigger: AAGCTTGCTCTGTCCACAGCAAGTGGTCTTGCCCAT...TCCAGCCTTTGGACCTAAGAGCTGCTTTTGAGACCTAAAATGAAGTGATTGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007757.15 |
||
| CDS-3UTR CCA 90 bp | AACCAGCCTCCTAAACACCCAGGAGCAGATATGAAGAGAGCAGAGTTCCCACGGTTTCTTGTAACACAATaGTCCTGGCAATTGTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NQPPKHPGADMKRAEFPRFLVTQ*SWQLFF Trigger: AAAGAACAATTGCCAGGACCATTGTGTTACAAGAAA...CCGTGGGAACTCTGCTCTCTTCATATCTGCTCCTGGGTGTTTAGGAGGCTGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR CCA 90 bp | GCCCAGAGAAACCCTGGGAAGCTTTCAGTTGACCATATTCCACTGCTGCAAGAGGATTTCAAATCTCTATaGGCAATAGCTGGTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AQRNPGKLSVDHIPLLQEDFKSL*AIAGFP Trigger: AGGAAAACCAGCTATTGCCCATAGAGATTTGAAATC...CTCTTGCAGCAGTGGAATATGGTCAACTGAAAGCTTCCCAGGGTTTCTCTGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR TCA 90 bp | TTCTGTAACTGTCTGGAAGAAGTATCCATAGTGCACAGAAAGGACCCCACGGCTAGATGTCAGCGCGTTTaGAGGATTCAAAATGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FCNCLEEVSIVHRKDPTARCQRV*RIQNVS Trigger: TGAAACATTTTGAATCCTTCAAACGCGCTGACATCT...AGCCGTGGGGTCCTTTCTGTGCACTATGGATACTTCTTCCAGACAGTTACAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR GCA 90 bp | AGGACTTTGAAAGCCACACAAGCCCTGCAAAGATTTGACAGCACTGAAGTAAAAGACCATCAGCATAAGTaGAATGCAGACGAAGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RTLKATQALQRFDSTEVKDHQHK*NADEAD Trigger: GTCTGCTTCGTCTGCATTGCACTTATGCTGATGGTC...TTTTACTTCAGTGCTGTCAAATCTTTGCAGGGCTTGTGTGGCTTTCAAAGTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007757.15 |
||
| CDS-3UTR GCA 90 bp | GTGACTCAAGGAAGTGGAAAAATGTCACACAGCTTCCATCAATCACTTCATTTTGACACCAACCACAGCTaGGTCCATGTCCCATTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VTQGSGKMSHSFHQSLHFDTNHS*VHVPLS Trigger: AGACAATGGGACATGGACGCAGCTGTGGTTGGTGTC...AAAATGAAGTGATTGATGGAAGCTGTGTGACATTTTTCCACTTCCTTGAGTCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007757.15 |
||
| CDS-3UTR GCA 90 bp | AAAGTAGACTACACAACATTCTGTAACTGTCTGGAAGAAGTATCCATAGTGCACGACACCAACCACAGCTaGGTCCATGTCCCATTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KVDYTTFCNCLEEVSIVHDTNHS*VHVPLS Trigger: AGACAATGGGACATGGACGCAGCTGTGGTTGGTGTC...GTGCACTATGGATACTTCTTCCAGACAGTTACAGAATGTTGTGTAGTCTACTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR GCA 90 bp | TACACAACATTCTGTAACTGTCTGGAAGAAGTATCCATAGTGCACAGAAAGGACATGGGCAAGACCACTTaGTGTGGACAGAGCAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: YTTFCNCLEEVSIVHRKDMGKTT*CGQSKL Trigger: AAGCTTGCTCTGTCCACAGCAAGTGGTCTTGCCCAT...GTCCTTTCTGTGCACTATGGATACTTCTTCCAGACAGTTACAGAATGTTGTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR CCA 90 bp | GCCCAGAGAAACCCTGGGAAGCTTTCAGTTGACCATATTCCACTGCTGCAAGAGTTTCTTGTAACACAATaGTCCTGGCAATTGTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AQRNPGKLSVDHIPLLQEFLVTQ*SWQLFF Trigger: AAAGAACAATTGCCAGGACCATTGTGTTACAAGAAA...CTCTTGCAGCAGTGGAATATGGTCAACTGAAAGCTTCCCAGGGTTTCTCTGGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR CCA 90 bp | TTCTGTAACTGTCTGGAAGAAGTATCCATAGTGCACAGAAAGGACCCCACGGCTGCCTACTCTGTGGTTTaGAGCAATATCAATTGTATC | + |
|
Preference number: 4 (lower is better) Translates to: FCNCLEEVSIVHRKDPTAAYSVV*SNINCI Trigger: GATACAATTGATATTGCTCCAAACCACAGAGTAGGC...AGCCGTGGGGTCCTTTCTGTGCACTATGGATACTTCTTCCAGACAGTTACAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR CCA 90 bp | TTCTGTAACTGTCTGGAAGAAGTATCCATAGTGCACAGAAAGGACCCCACGGCTCATTTCTTCAACCGATaGATCAGAAGGTACAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: FCNCLEEVSIVHRKDPTAHFFNR*IRRYKI Trigger: GATCTTGTACCTTCTGATCCATCGGTTGAAGAAATG...AGCCGTGGGGTCCTTTCTGTGCACTATGGATACTTCTTCCAGACAGTTACAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR TCA 90 bp | ATGTTCAACATCTCGTCTCAAGCAATGATGATAACATTTCCCCGCCCAGAATATTGTGGTCTCAGTGACTaGGACAAAGCAAAGACCATC | + |
|
Preference number: 4 (lower is better) Translates to: MFNISSQAMMITFPRPEYCGLSD*DKAKTI Trigger: GATGGTCTTTGCTTTGTCTCAGTCACTGAGACCACA...ATATTCTGGGCGGGGAAATGTTATCATCATTGCTTGAGACGAGATGTTGAACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007757.15 |
||
| CDS-3UTR TCA 90 bp | TCCCTCATAACACCCAGTGACTCAAGGAAGTGGAAAAATGTCACACAGCTTCCATTATTGCAGTGGTCCTaGTTGCAGCAATATGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SLITPSDSRKWKNVTQLPLLQWS*LQQYVV Trigger: TACAACATATTGCTGCAATCAGGACCACTGCAATAA...TGGAAGCTGTGTGACATTTTTCCACTTCCTTGAGTCACTGGGTGTTATGAGGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007757.15 |
||
| CDS-3UTR TCA 90 bp | ACAACATTCTGTAACTGTCTGGAAGAAGTATCCATAGTGCACAGAAAGGACCCCCTGGCAATTGTTCTTTaGACAAGCAGTGGTAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: TTFCNCLEEVSIVHRKDPLAIVL*TSSGKP Trigger: AGGTTTACCACTGCTTGTTCAAAGAACAATTGCCAG...GGGGTCCTTTCTGTGCACTATGGATACTTCTTCCAGACAGTTACAGAATGTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR GCA 90 bp | CAGAGAAACCCTGGGAAGCTTTCAGTTGACCATATTCCACTGCTGCAAGAGGAAGTCTTTGTTGTCTGCTaGTATAAATCCCAGGATATT | + |
|
Preference number: 4 (lower is better) Translates to: QRNPGKLSVDHIPLLQEEVFVVC*YKSQDI Trigger: AATATCCTGGGATTTATAGCAGCAGACAACAAAGAC...TTCCTCTTGCAGCAGTGGAATATGGTCAACTGAAAGCTTCCCAGGGTTTCTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| 3UTR CAA 72 bp | CTCCCAAACTATTCTTCAGAATTTCAACACGTCGACTaGTTCTGCTGGGCTATAACAGAACAACAGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LPNYSSEFQHVD*FCWAITEQQLE Trigger: TTCCAGCTGTTGTTCTGTTATAGCCCAGCAGAACAAGTCGACGTGTTGAAATTCTGAAGAATAGTTTGGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007757.15 |
||
| CDS-3UTR GCA 90 bp | AGGACTTTGAAAGCCACACAAGCCCTGCAAAGATTTGACAGCACTGAAGTAAAAACCGACCTTTGCCAATaGTTTCTTGTAACACAATGG | + |
|
Preference number: 4 (lower is better) Translates to: RTLKATQALQRFDSTEVKTDLCQ*FLVTQW Trigger: CCATTGTGTTACAAGAAAGCATTGGCAAAGGTCGGT...TTTTACTTCAGTGCTGTCAAATCTTTGCAGGGCTTGTGTGGCTTTCAAAGTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007757.15 |
||
| CDS-3UTR CCA 90 bp | CCAGTGACTCAAGGAAGTGGAAAAATGTCACACAGCTTCCATCAATCACTTCATTTGATGCCTTCCTGTTaGCTGAGTTGTGACAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: PVTQGSGKMSHSFHQSLHLMPSC*LSCDNV Trigger: AACATTGTCACAACTCAGCCAACAGGAAGGCATCAA...ATGAAGTGATTGATGGAAGCTGTGTGACATTTTTCCACTTCCTTGAGTCACTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007757.15 |
||
| CDS-3UTR TCA 90 bp | GTGACTCAAGGAAGTGGAAAAATGTCACACAGCTTCCATCAATCACTTCATTTTAACTGCCCCTGTTTTTaGAGATGGTGCACATACAAA | + |
|
Preference number: 4 (lower is better) Translates to: VTQGSGKMSHSFHQSLHFNCPCF*RWCTYK Trigger: TTTGTATGTGCACCATCTTCAAAAACAGGGGCAGTT...AAAATGAAGTGATTGATGGAAGCTGTGTGACATTTTTCCACTTCCTTGAGTCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000007757.15 |
||
| CDS-3UTR GCA 90 bp | AAAGTAGACTACACAACATTCTGTAACTGTCTGGAAGAAGTATCCATAGTGCACCTCCAAACCGACCTTTaGCAATGCTTTCTTGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: KVDYTTFCNCLEEVSIVHLQTDL*QCFLVT Trigger: TGTTACAAGAAAGCATTGGCAAAGGTCGGTTTGGAG...GTGCACTATGGATACTTCTTCCAGACAGTTACAGAATGTTGTGTAGTCTACTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR CCA 90 bp | TACACAACATTCTGTAACTGTCTGGAAGAAGTATCCATAGTGCACAGAAAGGACCATTTCTTCAACCGATaGATCAGAAGGTACAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: YTTFCNCLEEVSIVHRKDHFFNR*IRRYKI Trigger: GATCTTGTACCTTCTGATCCATCGGTTGAAGAAATG...GTCCTTTCTGTGCACTATGGATACTTCTTCCAGACAGTTACAGAATGTTGTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR CCA 90 bp | AAAGTAGACTACACAACATTCTGTAACTGTCTGGAAGAAGTATCCATAGTGCACTTGATGCCTTCCTGTTaGCTGAGTTGTGACAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: KVDYTTFCNCLEEVSIVHLMPSC*LSCDNV Trigger: AACATTGTCACAACTCAGCCAACAGGAAGGCATCAA...GTGCACTATGGATACTTCTTCCAGACAGTTACAGAATGTTGTGTAGTCTACTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR GCA 90 bp | ATGTTCAACATCTCGTCTCAAGCAATGATGATAACATTTCCCCGCCCAGAATATGTCTTTGTTGTCTGCTaGTATAAATCCCAGGATATT | + |
|
Preference number: 4 (lower is better) Translates to: MFNISSQAMMITFPRPEYVFVVC*YKSQDI Trigger: AATATCCTGGGATTTATAGCAGCAGACAACAAAGAC...ATATTCTGGGCGGGGAAATGTTATCATCATTGCTTGAGACGAGATGTTGAACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007757.15 |
||
| CDS-3UTR CCA 90 bp | CCAGTGACTCAAGGAAGTGGAAAAATGTCACACAGCTTCCATCAATCACTTCATAAAAGGTCCTGTAGTTaGGAGTTCTATTTTATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PVTQGSGKMSHSFHQSLHKRSCS*EFYFIA Trigger: TGCAATAAAATAGAACTCCCAACTACAGGACCTTTT...ATGAAGTGATTGATGGAAGCTGTGTGACATTTTTCCACTTCCTTGAGTCACTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000007757.15 |
||
| CDS-3UTR CCA 90 bp | CATCAATCACTTCATTTTAGGTCTCAAAAGCAGCTCTTAGGTCCAAAGGCTGGATTTCTTGTAACACAATaGTCCTGGCAATTGTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HQSLHFRSQKQLLGPKAGFLVTQ*SWQLFF Trigger: AAAGAACAATTGCCAGGACCATTGTGTTACAAGAAA...TCCAGCCTTTGGACCTAAGAGCTGCTTTTGAGACCTAAAATGAAGTGATTGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007757.15 |
||
| CDS-3UTR CCA 90 bp | TACACAACATTCTGTAACTGTCTGGAAGAAGTATCCATAGTGCACAGAAAGGACGATTTCAAATCTCTATaGGCAATAGCTGGTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YTTFCNCLEEVSIVHRKDDFKSL*AIAGFP Trigger: AGGAAAACCAGCTATTGCCCATAGAGATTTGAAATC...GTCCTTTCTGTGCACTATGGATACTTCTTCCAGACAGTTACAGAATGTTGTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR CCA 90 bp | ATGTTCAACATCTCGTCTCAAGCAATGATGATAACATTTCCCCGCCCAGAATATTATCAATTGTATCTGTaGCAGAATCATGTCTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: MFNISSQAMMITFPRPEYYQLYL*QNHVSQ Trigger: CTGTGAGACATGATTCTGCCACAGATACAATTGATA...ATATTCTGGGCGGGGAAATGTTATCATCATTGCTTGAGACGAGATGTTGAACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007757.15 |
||
| CDS-3UTR GCA 90 bp | AAAGTAGACTACACAACATTCTGTAACTGTCTGGAAGAAGTATCCATAGTGCACATTGTCTTTGTTGTCTaGTGCTATAAATCCCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KVDYTTFCNCLEEVSIVHIVFVV*CYKSQD Trigger: ATCCTGGGATTTATAGCAGCAGACAACAAAGACAAT...GTGCACTATGGATACTTCTTCCAGACAGTTACAGAATGTTGTGTAGTCTACTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| 3UTR CAA 72 bp | GTAGTAGTTTGTCATTGGTTTTACGTATCTGACAATTaGCAGAGGGAAGAGTCAAACATGTATGGATTACAA | + |
|
Preference number: 4 (lower is better) Translates to: VVVCHWFYVSDN*QREESNMYGLQ Trigger: TTGTAATCCATACATGTTTGACTCTTCCCTCTGCAAATTGTCAGATACGTAAAACCAATGACAAACTACTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007757.15 |
||
| 3UTR CAA 72 bp | ACTTACAGCTACATAACATGTGAAAGTCACCTACACTaGTACATTCATATTAACTATATCTGCCTTCCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: TYSYITCESHLH*YIHINYICLPR Trigger: TCTAGGAAGGCAGATATAGTTAATATGAATGTACAAGTGTAGGTGACTTTCACATGTTATGTAGCTGTAAGT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 |
||
| CDS-3UTR CAA 90 bp | GTGCACAGAAAGGACCCCACGGCTGCCTCTGGGCCCAGAGAAACCCTGGGAAGCGTGGACAGAGCAAGCTaGATCATTCCTTCCACAGTA | + |
|
Preference number: 5 (lower is better) Translates to: VHRKDPTAASGPRETLGSVDRAS*IIPSTV Trigger: TACTGTGGAAGGAATGATCAAGCTTGCTCTGTCCAC...GCTTCCCAGGGTTTCTCTGGGCCCAGAGGCAGCCGTGGGGTCCTTTCTGTGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR CAA 90 bp | GTGCACAGAAAGGACCCCACGGCTGCCTCTGGGCCCAGAGAAACCCTGGGAAGCAGAACACTAAGCCCATaGCATAGATGTCAGCGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: VHRKDPTAASGPRETLGSRTLSP*HRCQRV Trigger: AACGCGCTGACATCTATGCAATGGGCTTAGTGTTCT...GCTTCCCAGGGTTTCTCTGGGCCCAGAGGCAGCCGTGGGGTCCTTTCTGTGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR CAA 90 bp | CATAGTGCACAGAAAGGACCCCACGGCTGCCTCTGGGCCCAGAGAAACCCTGGGGTGGACAGAGCAAGCTaGATCATTCCTTCCACAGTA | + |
|
Preference number: 5 (lower is better) Translates to: HSAQKGPHGCLWAQRNPGVDRAS*IIPSTV Trigger: TACTGTGGAAGGAATGATCAAGCTTGCTCTGTCCAC...CCCAGGGTTTCTCTGGGCCCAGAGGCAGCCGTGGGGTCCTTTCTGTGCACTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR CAA 90 bp | CATAGTGCACAGAAAGGACCCCACGGCTGCCTCTGGGCCCAGAGAAACCCTGGGAGAACACTAAGCCCATaGCATAGATGTCAGCGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: HSAQKGPHGCLWAQRNPGRTLSP*HRCQRV Trigger: AACGCGCTGACATCTATGCAATGGGCTTAGTGTTCT...CCCAGGGTTTCTCTGGGCCCAGAGGCAGCCGTGGGGTCCTTTCTGTGCACTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR CAA 90 bp | AAGGACCCCACGGCTGCCTCTGGGCCCAGAGAAACCCTGGGAAGCTTTCAGTTGGTGGACAGAGCAAGCTaGATCATTCCTTCCACAGTA | + |
|
Preference number: 5 (lower is better) Translates to: KDPTAASGPRETLGSFQLVDRAS*IIPSTV Trigger: TACTGTGGAAGGAATGATCAAGCTTGCTCTGTCCAC...CAACTGAAAGCTTCCCAGGGTTTCTCTGGGCCCAGAGGCAGCCGTGGGGTCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS CCA 90 bp | GCAGATATAGACCATCAGCATAAGTGCAATGCAGACGAAGCAGACTaGACCAGCAATGACAGCTGCCAGCTCCACAGGACCAAGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ADIDHQHKCNADEAD*TSNDSCQLHRTKAS Trigger: GCTGGCCTTGGTCCTGTGGAGCTGGCAGCTGTCATTGCTGGTCCAGTCTGCTTCGTCTGCATTGCACTTATGCTGATGGTCTATATCTGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 ENSMUST00000126171.9 |
||
| CDS-3UTR CAA 90 bp | TCTGGAAGAAGTATCCATAGTGCACAGAAAGGACCCCACGGCTGCCTCTGGGCCTGCGTCCATGTCCCATaGTCTTTGTTGTCTGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SGRSIHSAQKGPHGCLWACVHVP*SLLSAA Trigger: AGCAGCAGACAACAAAGACAATGGGACATGGACGCA...GGCCCAGAGGCAGCCGTGGGGTCCTTTCTGTGCACTATGGATACTTCTTCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
||
| CDS-3UTR CAA 90 bp | CATAGTGCACAGAAAGGACCCCACGGCTGCCTCTGGGCCCAGAGAAACCCTGGGAGCTCTGCCATCTGTTaGGAATATTTGGCCTTAACT | + |
|
Preference number: 5 (lower is better) Translates to: HSAQKGPHGCLWAQRNPGSSAIC*EYLALT Trigger: AGTTAAGGCCAAATATTCCAAACAGATGGCAGAGCT...CCCAGGGTTTCTCTGGGCCCAGAGGCAGCCGTGGGGTCCTTTCTGTGCACTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
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| CDS-3UTR CAA 90 bp | AACCAGCCTCCTAAACACCCAGGAGCAGATATGAAGAGAGCAGAGTTCCCACGGGCAAAGCTGTCAGCCTaGCTGCTCCATTGGCATACC | + |
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Preference number: 5 (lower is better) Translates to: NQPPKHPGADMKRAEFPRAKLSA*LLHWHT Trigger: GGTATGCCAATGGAGCAGCAAGGCTGACAGCTTTGC...CCGTGGGAACTCTGCTCTCTTCATATCTGCTCCTGGGTGTTTAGGAGGCTGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
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| CDS CCA 90 bp | CAAAGACCATCTGTCTCACAGGTAAAATTATCCTTTGTACAGAGGTaGCAGAAACACTGTAATGCCTTCGCCCCCGGGAGCAGCGTCGCC | + |
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Preference number: 5 (lower is better) Translates to: QRPSVSQVKLSFVQR*QKHCNAFAPGSSVA Trigger: GGCGACGCTGCTCCCGGGGGCGAAGGCATTACAGTGTTTCTGCCACCTCTGTACAAAGGATAATTTTACCTGTGAGACAGATGGTCTTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 |
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| CDS-3UTR CAA 90 bp | GGGCCCAGAGAAACCCTGGGAAGCTTTCAGTTGACCATATTCCACTGCTGCAAGTGCGTCCATGTCCCATaGTCTTTGTTGTCTGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: GPRETLGSFQLTIFHCCKCVHVP*SLLSAA Trigger: AGCAGCAGACAACAAAGACAATGGGACATGGACGCA...CTTGCAGCAGTGGAATATGGTCAACTGAAAGCTTCCCAGGGTTTCTCTGGGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
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| CDS-3UTR CAA 90 bp | CAGGCTAAACGTCTCAACTGCAGAGCTCCAGTGCTCCTGTGGGGTGTTCCCGCAATCTGTTTGGAATATTaGGCCTTAACTTCTGTTCGC | + |
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Preference number: 5 (lower is better) Translates to: QAKRLNCRAPVLLWGVPAICLEY*ALTSVR Trigger: GCGAACAGAAGTTAAGGCCAAATATTCCAAACAGAT...TGCGGGAACACCCCACAGGAGCACTGGAGCTCTGCAGTTGAGACGTTTAGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 |
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| CDS-3UTR CAA 90 bp | TTCTGTAACTGTCTGGAAGAAGTATCCATAGTGCACAGAAAGGACCCCACGGCTGCAAAGCTGTCAGCCTaGCTGCTCCATTGGCATACC | + |
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Preference number: 5 (lower is better) Translates to: FCNCLEEVSIVHRKDPTAAKLSA*LLHWHT Trigger: GGTATGCCAATGGAGCAGCAAGGCTGACAGCTTTGC...AGCCGTGGGGTCCTTTCTGTGCACTATGGATACTTCTTCCAGACAGTTACAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
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| CDS-3UTR CAA 90 bp | GCCCAGAGAAACCCTGGGAAGCTTTCAGTTGACCATATTCCACTGCTGCAAGAGAGAACACTAAGCCCATaGCATAGATGTCAGCGCGTT | + |
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Preference number: 5 (lower is better) Translates to: AQRNPGKLSVDHIPLLQERTLSP*HRCQRV Trigger: AACGCGCTGACATCTATGCAATGGGCTTAGTGTTCT...CTCTTGCAGCAGTGGAATATGGTCAACTGAAAGCTTCCCAGGGTTTCTCTGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
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| CDS-3UTR CAA 90 bp | TCTGGAAGAAGTATCCATAGTGCACAGAAAGGACCCCACGGCTGCCTCTGGGCCATCTGTTTGGAATATTaGGCCTTAACTTCTGTTCGC | + |
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Preference number: 5 (lower is better) Translates to: SGRSIHSAQKGPHGCLWAICLEY*ALTSVR Trigger: GCGAACAGAAGTTAAGGCCAAATATTCCAAACAGAT...GGCCCAGAGGCAGCCGTGGGGTCCTTTCTGTGCACTATGGATACTTCTTCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
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| CDS-3UTR CAA 90 bp | GCCCAGAGAAACCCTGGGAAGCTTTCAGTTGACCATATTCCACTGCTGCAAGAGCAATGGTCCTGGCAATaGTTCTTTGAACAAGCAGTG | + |
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Preference number: 5 (lower is better) Translates to: AQRNPGKLSVDHIPLLQEQWSWQ*FFEQAV Trigger: CACTGCTTGTTCAAAGAACAATTGCCAGGACCATTG...CTCTTGCAGCAGTGGAATATGGTCAACTGAAAGCTTCCCAGGGTTTCTCTGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
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| CDS-3UTR CAA 90 bp | TTCTGTAACTGTCTGGAAGAAGTATCCATAGTGCACAGAAAGGACCCCACGGCTTGCGTCCATGTCCCATaGTCTTTGTTGTCTGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: FCNCLEEVSIVHRKDPTACVHVP*SLLSAA Trigger: AGCAGCAGACAACAAAGACAATGGGACATGGACGCA...AGCCGTGGGGTCCTTTCTGTGCACTATGGATACTTCTTCCAGACAGTTACAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
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| CDS-3UTR CAA 90 bp | GGGGTGTTCCCGCATGGCAGTCACTGCTTATCAATGCTACAGCCTTGCCTCAGTATCTGTTTGGAATATTaGGCCTTAACTTCTGTTCGC | + |
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Preference number: 5 (lower is better) Translates to: GVFPHGSHCLSMLQPCLSICLEY*ALTSVR Trigger: GCGAACAGAAGTTAAGGCCAAATATTCCAAACAGAT...ACTGAGGCAAGGCTGTAGCATTGATAAGCAGTGACTGCCATGCGGGAACACCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 |
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| CDS-3UTR CAA 90 bp | GCCCAGAGAAACCCTGGGAAGCTTTCAGTTGACCATATTCCACTGCTGCAAGAGAATAGCTGGTTTTCCTaGGGTACCAACAATCTCCAT | + |
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Preference number: 5 (lower is better) Translates to: AQRNPGKLSVDHIPLLQENSWFS*GTNNLH Trigger: ATGGAGATTGTTGGTACCCAAGGAAAACCAGCTATT...CTCTTGCAGCAGTGGAATATGGTCAACTGAAAGCTTCCCAGGGTTTCTCTGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
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| CDS-3UTR CAA 90 bp | GGGGTGTTCCCGCATGGCAGTCACTGCTTATCAATGCTACAGCCTTGCCTCAGTTTGGAGCAATATCAATaGTATCTGTGGCAGAATCAT | + |
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Preference number: 5 (lower is better) Translates to: GVFPHGSHCLSMLQPCLSLEQYQ*YLWQNH Trigger: ATGATTCTGCCACAGATACAATTGATATTGCTCCAA...ACTGAGGCAAGGCTGTAGCATTGATAAGCAGTGACTGCCATGCGGGAACACCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 |
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| CDS-3UTR CAA 90 bp | TACACAACATTCTGTAACTGTCTGGAAGAAGTATCCATAGTGCACAGAAAGGACGCAAAGCTGTCAGCCTaGCTGCTCCATTGGCATACC | + |
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Preference number: 5 (lower is better) Translates to: YTTFCNCLEEVSIVHRKDAKLSA*LLHWHT Trigger: GGTATGCCAATGGAGCAGCAAGGCTGACAGCTTTGC...GTCCTTTCTGTGCACTATGGATACTTCTTCCAGACAGTTACAGAATGTTGTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
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| CDS-3UTR CAA 90 bp | TCCCTCATAACACCCAGTGACTCAAGGAAGTGGAAAAATGTCACACAGCTTCCACAATGGTCCTGGCAATaGTTCTTTGAACAAGCAGTG | + |
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Preference number: 5 (lower is better) Translates to: SLITPSDSRKWKNVTQLPQWSWQ*FFEQAV Trigger: CACTGCTTGTTCAAAGAACAATTGCCAGGACCATTG...TGGAAGCTGTGTGACATTTTTCCACTTCCTTGAGTCACTGGGTGTTATGAGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007757.15 |
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| CDS-3UTR CAA 90 bp | TTCTGTAACTGTCTGGAAGAAGTATCCATAGTGCACAGAAAGGACCCCACGGCTAGCTCTGCCATCTGTTaGGAATATTTGGCCTTAACT | + |
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Preference number: 5 (lower is better) Translates to: FCNCLEEVSIVHRKDPTASSAIC*EYLALT Trigger: AGTTAAGGCCAAATATTCCAAACAGATGGCAGAGCT...AGCCGTGGGGTCCTTTCTGTGCACTATGGATACTTCTTCCAGACAGTTACAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
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| CDS-3UTR CAA 90 bp | CAGAGAAACCCTGGGAAGCTTTCAGTTGACCATATTCCACTGCTGCAAGAGGAAAGCTCTGCCATCTGTTaGGAATATTTGGCCTTAACT | + |
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Preference number: 5 (lower is better) Translates to: QRNPGKLSVDHIPLLQEESSAIC*EYLALT Trigger: AGTTAAGGCCAAATATTCCAAACAGATGGCAGAGCT...TTCCTCTTGCAGCAGTGGAATATGGTCAACTGAAAGCTTCCCAGGGTTTCTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
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| CDS-3UTR CAA 90 bp | CAGAGAAACCCTGGGAAGCTTTCAGTTGACCATATTCCACTGCTGCAAGAGGAACTATTGTGTATAACTTaGTCTGTGGTCTCAGTGACT | + |
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Preference number: 5 (lower is better) Translates to: QRNPGKLSVDHIPLLQEELLCIT*SVVSVT Trigger: AGTCACTGAGACCACAGACAAAGTTATACACAATAG...TTCCTCTTGCAGCAGTGGAATATGGTCAACTGAAAGCTTCCCAGGGTTTCTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 |
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| CDS-3UTR CAA 90 bp | TCCCTCATAACACCCAGTGACTCAAGGAAGTGGAAAAATGTCACACAGCTTCCACTATTGTGTATAACTTaGTCTGTGGTCTCAGTGACT | + |
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Preference number: 5 (lower is better) Translates to: SLITPSDSRKWKNVTQLPLLCIT*SVVSVT Trigger: AGTCACTGAGACCACAGACAAAGTTATACACAATAG...TGGAAGCTGTGTGACATTTTTCCACTTCCTTGAGTCACTGGGTGTTATGAGGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007757.15 |
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| CDS-3UTR CAA 90 bp | TTCTGTAACTGTCTGGAAGAAGTATCCATAGTGCACAGAAAGGACCCCACGGCTTTGGAGCAATATCAATaGTATCTGTGGCAGAATCAT | + |
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Preference number: 5 (lower is better) Translates to: FCNCLEEVSIVHRKDPTALEQYQ*YLWQNH Trigger: ATGATTCTGCCACAGATACAATTGATATTGCTCCAA...AGCCGTGGGGTCCTTTCTGTGCACTATGGATACTTCTTCCAGACAGTTACAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
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| CDS-3UTR CAA 90 bp | TACACAACATTCTGTAACTGTCTGGAAGAAGTATCCATAGTGCACAGAAAGGACGTCCCATTGTCTTTGTaGTCTGCTGCTATAAATCCC | + |
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Preference number: 5 (lower is better) Translates to: YTTFCNCLEEVSIVHRKDVPLSL*SAAINP Trigger: GGGATTTATAGCAGCAGACAACAAAGACAATGGGAC...GTCCTTTCTGTGCACTATGGATACTTCTTCCAGACAGTTACAGAATGTTGTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
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| CDS-3UTR CAA 90 bp | AGGACTTTGAAAGCCACACAAGCCCTGCAAAGATTTGACAGCACTGAAGTAAAAAATAGCTGGTTTTCCTaGGGTACCAACAATCTCCAT | + |
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Preference number: 5 (lower is better) Translates to: RTLKATQALQRFDSTEVKNSWFS*GTNNLH Trigger: ATGGAGATTGTTGGTACCCAAGGAAAACCAGCTATT...TTTTACTTCAGTGCTGTCAAATCTTTGCAGGGCTTGTGTGGCTTTCAAAGTCCT 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000007757.15 |
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| CDS-3UTR CAA 90 bp | ACAACATTCTGTAACTGTCTGGAAGAAGTATCCATAGTGCACAGAAAGGACCCCTTGGAGCAATATCAATaGTATCTGTGGCAGAATCAT | + |
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Preference number: 5 (lower is better) Translates to: TTFCNCLEEVSIVHRKDPLEQYQ*YLWQNH Trigger: ATGATTCTGCCACAGATACAATTGATATTGCTCCAA...GGGGTCCTTTCTGTGCACTATGGATACTTCTTCCAGACAGTTACAGAATGTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
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| CDS-3UTR CAA 90 bp | AAAGTAGACTACACAACATTCTGTAACTGTCTGGAAGAAGTATCCATAGTGCACAATAGCTGGTTTTCCTaGGGTACCAACAATCTCCAT | + |
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Preference number: 5 (lower is better) Translates to: KVDYTTFCNCLEEVSIVHNSWFS*GTNNLH Trigger: ATGGAGATTGTTGGTACCCAAGGAAAACCAGCTATT...GTGCACTATGGATACTTCTTCCAGACAGTTACAGAATGTTGTGTAGTCTACTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 |
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| CDS TCA 72 bp | CCCCCGGGAGCAGCGTCGCCGCCGCCACCAACACGATaGGGAGCTGCGGACGACGTGGAGCAGCGGCCGCCG | + |
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Preference number: 6 (lower is better) Translates to: PPGAASPPPPTR*GAADDVEQRPP Trigger: CGGCGGCCGCTGCTCCACGTCGTCCGCAGCTCCTCATCGTGTTGGTGGCGGCGGCGACGCTGCTCCCGGGGG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 |
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| CDS CCA 72 bp | GACCATCAGCATAAGTGCAATGCAGACGAAGCAGACTaGACCAGCAATGACAGCTGCCAGCTCCACAGGACC | + |
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Preference number: 6 (lower is better) Translates to: DHQHKCNADEAD*TSNDSCQLHRT Trigger: GGTCCTGTGGAGCTGGCAGCTGTCATTGCTGGTCCAGTCTGCTTCGTCTGCATTGCACTTATGCTGATGGTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 ENSMUST00000126171.9 |
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| CDS TCA 72 bp | GTGATGGATCCTCTTCATTTGGCACACGGTGGTGAATaGCAGTGCGGTTATGGCAGATATAGACCATCAGCA | + |
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Preference number: 6 (lower is better) Translates to: VMDPLHLAHGGE*QCGYGRYRPSA Trigger: TGCTGATGGTCTATATCTGCCATAACCGCACTGTCATTCACCACCGTGTGCCAAATGAAGAGGATCCATCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 ENSMUST00000126171.9 |
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| CDS GCA 72 bp | AGTGCGGTTATGGCAGATATAGACCATCAGCATAAGTaGAATGCAGACGAAGCAGACTGGACCAGCAATGAC | + |
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Preference number: 6 (lower is better) Translates to: SAVMADIDHQHK*NADEADWTSND Trigger: GTCATTGCTGGTCCAGTCTGCTTCGTCTGCATTGCACTTATGCTGATGGTCTATATCTGCCATAACCGCACT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 ENSMUST00000126171.9 |
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| CDS CAA 72 bp | AGATGGGCAAGACCACTTGCTGTGGACAGAGCAAGCTaGATCATTCCTTCCACAGTAACAGTGTATCTATTC | + |
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Preference number: 6 (lower is better) Translates to: RWARPLAVDRAS*IIPSTVTVYLF Trigger: GAATAGATACACTGTTACTGTGGAAGGAATGATCAAGCTTGCTCTGTCCACAGCAAGTGGTCTTGCCCATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 ENSMUST00000126171.9 |
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| CDS CCA 72 bp | CTACTCTGTGGTTTGGAGCAATATCAATTGTATCTGTaGCAGAATCATGTCTCACAGCAAGTCCCAAGTCTG | + |
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Preference number: 6 (lower is better) Translates to: LLCGLEQYQLYL*QNHVSQQVPSL Trigger: CAGACTTGGGACTTGCTGTGAGACATGATTCTGCCACAGATACAATTGATATTGCTCCAAACCACAGAGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 ENSMUST00000126171.9 |
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| CDS CCA 72 bp | AGGGGCCATGTACCTTTTAGTGCCTACTCTGTGGTTTaGAGCAATATCAATTGTATCTGTGGCAGAATCATG | + |
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Preference number: 6 (lower is better) Translates to: RGHVPFSAYSVV*SNINCICGRIM Trigger: CATGATTCTGCCACAGATACAATTGATATTGCTCCAAACCACAGAGTAGGCACTAAAAGGTACATGGCCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 ENSMUST00000126171.9 |
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| CDS CCA 72 bp | GACCTTTGCCAATGCTTTCTTGTAACACAATGGTCCTaGCAATTGTTCTTTGAACAAGCAGTGGTAAACCTG | + |
|
Preference number: 6 (lower is better) Translates to: DLCQCFLVTQWS*QLFFEQAVVNL Trigger: CAGGTTTACCACTGCTTGTTCAAAGAACAATTGCCAGGACCATTGTGTTACAAGAAAGCATTGGCAAAGGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 ENSMUST00000126171.9 |
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| CDS CAA 72 bp | TCAAGGCCTCACAGCTCTGCCATCTGTTTGGAATATTaGGCCTTAACTTCTGTTCGCAAACTACTTTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: SRPHSSAICLEY*ALTSVRKLLFS Trigger: TGAGAAAAGTAGTTTGCGAACAGAAGTTAAGGCCAAATATTCCAAACAGATGGCAGAGCTGTGAGGCCTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 ENSMUST00000107725.3 ENSMUST00000126171.9 |
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| CDS CAA 90 bp | GGAATTAGGTCAATTTCAGCTATACACATACTATTGTGTATAACTTaGTCTGTGGTCTCAGTGACTGAGACAAAGCAAAGACCATCTGTC | + |
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Preference number: 6 (lower is better) Translates to: GIRSISAIHILLCIT*SVVSVTETKQRPSV Trigger: GACAGATGGTCTTTGCTTTGTCTCAGTCACTGAGACCACAGACAAAGTTATACACAATAGTATGTGTATAGCTGAAATTGACCTAATTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007757.15 ENSMUST00000044234.14 |
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