RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TGFBI (Mus musculus)

Ensembl gene IDs: ENSMUSG00000035493

Ensembl transcript IDs: ENSMUST00000045173.10, ENSMUST00000225600.2

Found 242 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CATGCCAAGGCTTTCCAGAATGCCGGACTGCTTGATTCACATTTGTaGGCTCCAAGATGCCGTAGTTCCCCTTTATCCAGGCCCTTGGCA +
Preference number: 1 (lower is better)
Translates to: HAKAFQNAGLLDSHL*APRCRSSPLSRPLA
Trigger: TGCCAAGGGCCTGGATAAAGGGGAACTACGGCATCTTGGAGCTCACAAATGTGAATCAAGCAGTCCGGCATTCTGGAAAGCCTTGGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
3UTR CCA 90 bp TTTATTATTACAAATGCACCATGGGTCCCTCACACTCAGGGAATCTaGATTCTACATGTTCTTCTTACCCTTTCTACCTGGGCAGGGCCA +
Preference number: 1 (lower is better)
Translates to: FIITNAPWVPHTQGI*ILHVLLTLSTWAGP
Trigger: TGGCCCTGCCCAGGTAGAAAGGGTAAGAAGAACATGTAGAATCCAGATTCCCTGAGTGTGAGGGACCCATGGTGCATTTGTAATAATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
3UTR TCA 90 bp ACCCGTCCAAGGCTCAGATCTCAATATGGTGCAGCCCATGTATGTTaGAGTGTGCTCTTTGGTTTCAAAAACATTCAATGGTCTCTTTGG +
Preference number: 1 (lower is better)
Translates to: TRPRLRSQYGAAHVC*SVLFGFKNIQWSLW
Trigger: CCAAAGAGACCATTGAATGTTTTTGAAACCAAAGAGCACACTTCAACATACATGGGCTGCACCATATTGAGATCTGAGCCTTGGACGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
3UTR-3UTR GCA 90 bp CTTCCTGCTAATGCTTCATCCTCTCCAGTAACCGCTGATAGACAGGGGCAAGTCAAACTGGCGGGAAGCTaGTGCAGGGCTCTCCTCCTC +
Preference number: 2 (lower is better)
Translates to: LPANASSSPVTADRQGQVKLAGS*CRALLL
Trigger: GAGGAGGAGAGCCCTGCAGCAGCTTCCCGCCAGTTT...GACTTGCCCCTGTCTATCAGCGGTTACTGGAGAGGATGAAGCATTAGCAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225600.2
3UTR-3UTR GCA 90 bp CTCAGGGAATCTGGATTCTACATGTTCTTCTTACCCTTTCTACCTGGGCAGGGCAAACTGGCGGGAAGCTaGTGCAGGGCTCTCCTCCTC +
Preference number: 2 (lower is better)
Translates to: LRESGFYMFFLPFLPGQGKLAGS*CRALLL
Trigger: GAGGAGGAGAGCCCTGCAGCAGCTTCCCGCCAGTTT...GCCCTGCCCAGGTAGAAAGGGTAAGAAGAACATGTAGAATCCAGATTCCCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
3UTR-3UTR CCA 90 bp TCTCAGGGGTCCCTGCTGACCGGCTCTTGGGAAGACTTGGGGGATGAAACAGCTCTTTATCCAGGCCCTTaGCACAGTCAGGAAATTCCA +
Preference number: 2 (lower is better)
Translates to: SQGSLLTGSWEDLGDETALYPGP*HSQEIP
Trigger: TGGAATTTCCTGACTGTGCCAAGGGCCTGGATAAAG...AGCTGTTTCATCCCCCAAGTCTTCCCAAGAGCCGGTCAGCAGGGACCCCTGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000225600.2
3UTR-3UTR CCA 90 bp CTACCTGGGCAGGGCCAATATAGAAGCATCCAAACCATGTGTGGACACAAGACACAAACTGAGAGAAACTaGCGGGAAGCTGCTGCAGGG +
Preference number: 2 (lower is better)
Translates to: LPGQGQYRSIQTMCGHKTQTERN*REAAAG
Trigger: CCCTGCAGCAGCTTCCCGCCAGTTTCTCTCAGTTTG...TGTCTTGTGTCCACACATGGTTTGGATGCTTCTATATTGGCCCTGCCCAGGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
3UTR-3UTR CCA 90 bp TACCTGGGCAGGGCCAATATAGAAGCATCCAAACCATGTGTGGACACAAGACATCAAACTGAGAGAAACTaGCGGGAAGCTGCTGCAGGG +
Preference number: 2 (lower is better)
Translates to: YLGRANIEASKPCVDTRHQTERN*REAAAG
Trigger: CCCTGCAGCAGCTTCCCGCCAGTTTCTCTCAGTTTG...ATGTCTTGTGTCCACACATGGTTTGGATGCTTCTATATTGGCCCTGCCCAGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
3UTR-3UTR CCA 90 bp GGTCCTTTCGGGAATTTGGTGCCAAGCTATGACTGCCAGATCTGTATATTCAATAGTCGCACAGACCTCTaGGCAGCCCTGGAATACGCT +
Preference number: 2 (lower is better)
Translates to: GPFGNLVPSYDCQICIFNSRTDL*AALEYA
Trigger: AGCGTATTCCAGGGCTGCCCAGAGGTCTGTGCGACT...ATTGAATATACAGATCTGGCAGTCATAGCTTGGCACCAAATTCCCGAAAGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225600.2
3UTR CAA 90 bp GAGCTTTACAGAACCATGCCAAGGCTTTCCAGAATGCCGGACTGCTaGATTCACATTTGTGAGCTCCAAGATGCCGTAGTTCCCCTTTAT +
Preference number: 2 (lower is better)
Translates to: ELYRTMPRLSRMPDC*IHICELQDAVVPLY
Trigger: ATAAAGGGGAACTACGGCATCTTGGAGCTCACAAATGTGAATCAAGCAGTCCGGCATTCTGGAAAGCCTTGGCATGGTTCTGTAAAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
3UTR-3UTR TCA 90 bp TCTACATGTTCTTCTTACCCTTTCTACCTGGGCAGGGCCAATATAGAAGCATCCGAATGCCGGACTGCTTaGTTCACATTTGTGAGCTCC +
Preference number: 2 (lower is better)
Translates to: STCSSYPFYLGRANIEASECRTA*FTFVSS
Trigger: GGAGCTCACAAATGTGAATCAAGCAGTCCGGCATTC...GGATGCTTCTATATTGGCCCTGCCCAGGTAGAAAGGGTAAGAAGAACATGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
3UTR-3UTR CCA 90 bp TTCTACCTGGGCAGGGCCAATATAGAAGCATCCAAACCATGTGTGGACACAAGACTTTATCCAGGCCCTTaGCACAGTCAGGAAATTCCA +
Preference number: 2 (lower is better)
Translates to: FYLGRANIEASKPCVDTRLYPGP*HSQEIP
Trigger: TGGAATTTCCTGACTGTGCCAAGGGCCTGGATAAAG...TCTTGTGTCCACACATGGTTTGGATGCTTCTATATTGGCCCTGCCCAGGTAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
3UTR-3UTR GCA 90 bp CTCAGGGAATCTGGATTCTACATGTTCTTCTTACCCTTTCTACCTGGGCAGGGCCAGATCTCAATATGGTaGAGCCCATGTATGTTGAAG +
Preference number: 2 (lower is better)
Translates to: LRESGFYMFFLPFLPGQGQISIW*SPCMLK
Trigger: CTTCAACATACATGGGCTGCACCATATTGAGATCTG...GCCCTGCCCAGGTAGAAAGGGTAAGAAGAACATGTAGAATCCAGATTCCCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
3UTR CAA 90 bp GCACAGTCAGGAAATTCCATGCTTTCGAGAGGTCCTTTCGGGAATTaGGTGCCAAGCTATGACTGCCAGATCTGTATATTCAATGGGTTA +
Preference number: 2 (lower is better)
Translates to: AQSGNSMLSRGPFGN*VPSYDCQICIFNGL
Trigger: TAACCCATTGAATATACAGATCTGGCAGTCATAGCTTGGCACCAAATTCCCGAAAGGACCTCTCGAAAGCATGGAATTTCCTGACTGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
3UTR-3UTR CCA 90 bp CAGGGAATCTGGATTCTACATGTTCTTCTTACCCTTTCTACCTGGGCAGGGCCACACACTCAGGGAATCTaGATTCTACATGTTCTTCTT +
Preference number: 2 (lower is better)
Translates to: QGIWILHVLLTLSTWAGPHTQGI*ILHVLL
Trigger: AAGAAGAACATGTAGAATCCAGATTCCCTGAGTGTG...TGGCCCTGCCCAGGTAGAAAGGGTAAGAAGAACATGTAGAATCCAGATTCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
3UTR-3UTR TCA 90 bp TCTACATGTTCTTCTTACCCTTTCTACCTGGGCAGGGCCAATATAGAAGCATCCTTTGGTGCCAAGCTATaGCTGCCAGATCTGTATATT +
Preference number: 2 (lower is better)
Translates to: STCSSYPFYLGRANIEASFGAKL*LPDLYI
Trigger: AATATACAGATCTGGCAGTCATAGCTTGGCACCAAA...GGATGCTTCTATATTGGCCCTGCCCAGGTAGAAAGGGTAAGAAGAACATGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
3UTR-3UTR GCA 90 bp CAACTCATAGCTTATAGTGATGCCGTTTCTCCAGCGGTACAAGAGCTTTACAGAAGTCAGGAAATTCCATaGTTTCGAGAGGTCCTTTCG +
Preference number: 2 (lower is better)
Translates to: QLIAYSDAVSPAVQELYRSQEIP*FREVLS
Trigger: CGAAAGGACCTCTCGAAAGCATGGAATTTCCTGACT...TCTGTAAAGCTCTTGTACCGCTGGAGAAACGGCATCACTATAAGCTATGAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
3UTR-3UTR CCA 90 bp TACCTGGGCAGGGCCAATATAGAAGCATCCAAACCATGTGTGGACACAAGACATATTCAATGGTCTCTTTaGCAAACTGAGAGAAACTGG +
Preference number: 2 (lower is better)
Translates to: YLGRANIEASKPCVDTRHIQWSL*QTERNW
Trigger: CCAGTTTCTCTCAGTTTGCCAAAGAGACCATTGAAT...ATGTCTTGTGTCCACACATGGTTTGGATGCTTCTATATTGGCCCTGCCCAGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
3UTR CAA 90 bp TACCCGTCCAAGGCTCAGATCTCAATATGGTGCAGCCCATGTATGTaGAAGTGTGCTCTTTGGTTTCAAAAACATTCAATGGTCTCTTTG +
Preference number: 2 (lower is better)
Translates to: YPSKAQISIWCSPCM*KCALWFQKHSMVSL
Trigger: CAAAGAGACCATTGAATGTTTTTGAAACCAAAGAGCACACTTCAACATACATGGGCTGCACCATATTGAGATCTGAGCCTTGGACGGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
3UTR-3UTR CCA 90 bp CTCACACTCAGGGAATCTGGATTCTACATGTTCTTCTTACCCTTTCTACCTGGGATTCAATGGTCTCTTTaGCAAACTGAGAGAAACTGG +
Preference number: 2 (lower is better)
Translates to: LTLRESGFYMFFLPFLPGIQWSL*QTERNW
Trigger: CCAGTTTCTCTCAGTTTGCCAAAGAGACCATTGAAT...CCCAGGTAGAAAGGGTAAGAAGAACATGTAGAATCCAGATTCCCTGAGTGTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
3UTR-3UTR GCA 90 bp TATGACTGCCAGATCTGTATATTCAATGGGTTAACAACCACGTTTGGAGGGATCCAGATCTCAATATGGTaGAGCCCATGTATGTTGAAG +
Preference number: 2 (lower is better)
Translates to: YDCQICIFNGLTTTFGGIQISIW*SPCMLK
Trigger: CTTCAACATACATGGGCTGCACCATATTGAGATCTG...GATCCCTCCAAACGTGGTTGTTAACCCATTGAATATACAGATCTGGCAGTCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
3UTR CAA 90 bp TCAGATCTCAATATGGTGCAGCCCATGTATGTTGAAGTGTGCTCTTaGGTTTCAAAAACATTCAATGGTCTCTTTGGCAAACTGAGAGAA +
Preference number: 2 (lower is better)
Translates to: SDLNMVQPMYVEVCS*VSKTFNGLFGKLRE
Trigger: TTCTCTCAGTTTGCCAAAGAGACCATTGAATGTTTTTGAAACCAAAGAGCACACTTCAACATACATGGGCTGCACCATATTGAGATCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
3UTR-3UTR CCA 90 bp AATCTGGATTCTACATGTTCTTCTTACCCTTTCTACCTGGGCAGGGCCAATATATTCAAAAACATTCAATaGTCTCTTTGGCAAACTGAG +
Preference number: 2 (lower is better)
Translates to: NLDSTCSSYPFYLGRANIFKNIQ*SLWQTE
Trigger: CTCAGTTTGCCAAAGAGACCATTGAATGTTTTTGAA...TATATTGGCCCTGCCCAGGTAGAAAGGGTAAGAAGAACATGTAGAATCCAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
3UTR TCA 72 bp GTCCCTGCTGACCGGCTCTTGGGAAGACTTGGGGGATaGAACAGCTTGCAGGCAGGCACCGAGGAGCAGAAC +
Preference number: 3 (lower is better)
Translates to: VPADRLLGRLGG*NSLQAGTEEQN
Trigger: GTTCTGCTCCTCGGTGCCTGCCTGCAAGCTGTTTCATCCCCCAAGTCTTCCCAAGAGCCGGTCAGCAGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000225600.2
3UTR GCA 72 bp ACCGGCTCTTGGGAAGACTTGGGGGATGAAACAGCTTaGAGGCAGGCACCGAGGAGCAGAACCTATCCCCAG +
Preference number: 3 (lower is better)
Translates to: TGSWEDLGDETA*RQAPRSRTYPQ
Trigger: CTGGGGATAGGTTCTGCTCCTCGGTGCCTGCCTGCAAGCTGTTTCATCCCCCAAGTCTTCCCAAGAGCCGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000225600.2
3UTR TCA 72 bp AAGTCGCACAGACCTCTGGGCAGCCCTGGAATACGCTaGCGCCTGTTTGAAGATTTCAAGGGCAGAGTCTGC +
Preference number: 3 (lower is better)
Translates to: KSHRPLGSPGIR*RLFEDFKGRVC
Trigger: GCAGACTCTGCCCTTGAAATCTTCAAACAGGCGTCAGCGTATTCCAGGGCTGCCCAGAGGTCTGTGCGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225600.2
3UTR CCA 72 bp CTCCAAGATGCCGTAGTTCCCCTTTATCCAGGCCCTTaGCACAGTCAGGAAATTCCATGCTTTCGAGAGGTC +
Preference number: 3 (lower is better)
Translates to: LQDAVVPLYPGP*HSQEIPCFREV
Trigger: GACCTCTCGAAAGCATGGAATTTCCTGACTGTGCCAAGGGCCTGGATAAAGGGGAACTACGGCATCTTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
3UTR TCA 72 bp AAACTATTCCAAATAACCACTCTCAGGGGTCCCTGCTaGCCGGCTCTTGGGAAGACTTGGGGGATGAAACAG +
Preference number: 3 (lower is better)
Translates to: KLFQITTLRGPC*PALGKTWGMKQ
Trigger: CTGTTTCATCCCCCAAGTCTTCCCAAGAGCCGGTCAGCAGGGACCCCTGAGAGTGGTTATTTGGAATAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000225600.2
3UTR GCA 72 bp CTTTATCCAGGCCCTTGGCACAGTCAGGAAATTCCATaGTTTCGAGAGGTCCTTTCGGGAATTTGGTGCCAA +
Preference number: 3 (lower is better)
Translates to: LYPGPWHSQEIP*FREVLSGIWCQ
Trigger: TTGGCACCAAATTCCCGAAAGGACCTCTCGAAAGCATGGAATTTCCTGACTGTGCCAAGGGCCTGGATAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
3UTR-3UTR CAA 90 bp AAGAACCTTTCTCCCCTTAACCCCTTCCCTACCCGTCCAAGGCTCAGATCTCAATGCAGCCCATGTATGTaGAAGTGTGCTCTTTGGTTT +
Preference number: 3 (lower is better)
Translates to: KNLSPLNPFPTRPRLRSQCSPCM*KCALWF
Trigger: AAACCAAAGAGCACACTTCAACATACATGGGCTGCA...TTGAGATCTGAGCCTTGGACGGGTAGGGAAGGGGTTAAGGGGAGAAAGGTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
3UTR GCA 72 bp CTTCCCTACCCGTCCAAGGCTCAGATCTCAATATGGTaGAGCCCATGTATGTTGAAGTGTGCTCTTTGGTTT +
Preference number: 3 (lower is better)
Translates to: LPYPSKAQISIW*SPCMLKCALWF
Trigger: AAACCAAAGAGCACACTTCAACATACATGGGCTGCACCATATTGAGATCTGAGCCTTGGACGGGTAGGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
3UTR TCA 72 bp TTCGAGAGGTCCTTTCGGGAATTTGGTGCCAAGCTATaGCTGCCAGATCTGTATATTCAATGGGTTAACAAC +
Preference number: 3 (lower is better)
Translates to: FERSFREFGAKL*LPDLYIQWVNN
Trigger: GTTGTTAACCCATTGAATATACAGATCTGGCAGTCATAGCTTGGCACCAAATTCCCGAAAGGACCTCTCGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
3UTR GCA 72 bp ATTCCATGCTTTCGAGAGGTCCTTTCGGGAATTTGGTaGCAAGCTATGACTGCCAGATCTGTATATTCAATG +
Preference number: 3 (lower is better)
Translates to: IPCFREVLSGIW*QAMTARSVYSM
Trigger: CATTGAATATACAGATCTGGCAGTCATAGCTTGGCACCAAATTCCCGAAAGGACCTCTCGAAAGCATGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
3UTR-3UTR CAA 90 bp AATCTGGATTCTACATGTTCTTCTTACCCTTTCTACCTGGGCAGGGCCAATATATGCAGCCCATGTATGTaGAAGTGTGCTCTTTGGTTT +
Preference number: 3 (lower is better)
Translates to: NLDSTCSSYPFYLGRANICSPCM*KCALWF
Trigger: AAACCAAAGAGCACACTTCAACATACATGGGCTGCA...TATATTGGCCCTGCCCAGGTAGAAAGGGTAAGAAGAACATGTAGAATCCAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
3UTR CAA 72 bp TCTCAGGGGTCCCTGCTGACCGGCTCTTGGGAAGACTaGGGGGATGAAACAGCTTGCAGGCAGGCACCGAGG +
Preference number: 4 (lower is better)
Translates to: SQGSLLTGSWED*GDETACRQAPR
Trigger: CCTCGGTGCCTGCCTGCAAGCTGTTTCATCCCCCAAGTCTTCCCAAGAGCCGGTCAGCAGGGACCCCTGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000225600.2
CDS-3UTR CCA 90 bp TGGCGGGAAGCTGCTGCAGGGCTCTCCTCCTCGGTCTTCCTGCTAATGCTTCATCCGTTGGTCGCATGGTaGTCAGCCTTCAGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: WREAAAGLSSSVFLLMLHPLVAW*SAFSSR
Trigger: CCGGCTGCTGAAGGCTGACCACCATGCGACCAACGG...ATGAAGCATTAGCAGGAAGACCGAGGAGGAGAGCCCTGCAGCAGCTTCCCGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225600.2
CDS-3UTR TCA 90 bp TGGCGGGAAGCTGCTGCAGGGCTCTCCTCCTCGGTCTTCCTGCTAATGCTTCATCACCGTTTGTGGCCATaGTGTCGGTTTCGGCAACAG +
Preference number: 4 (lower is better)
Translates to: WREAAAGLSSSVFLLMLHHRLWP*CRFRQQ
Trigger: CTGTTGCCGAAACCGACATCATGGCCACAAACGGTG...ATGAAGCATTAGCAGGAAGACCGAGGAGGAGAGCCCTGCAGCAGCTTCCCGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225600.2
CDS-3UTR TCA 90 bp AAGAACCTTTCTCCCCTTAACCCCTTCCCTACCCGTCCAAGGCTCAGATCTCAACACCAGCTGGTAGGGTaGCTTGGCGGGACCTGCAAG +
Preference number: 4 (lower is better)
Translates to: KNLSPLNPFPTRPRLRSQHQLVG*LGGTCK
Trigger: CTTGCAGGTCCCGCCAAGTCACCCTACCAGCTGGTG...TTGAGATCTGAGCCTTGGACGGGTAGGGAAGGGGTTAAGGGGAGAAAGGTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR GCA 90 bp CTCAGGGAATCTGGATTCTACATGTTCTTCTTACCCTTTCTACCTGGGCAGGGCCCACCTCCAGTGTGGTaGCCCCCAGGGTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: LRESGFYMFFLPFLPGQGPPPVW*PPGSPW
Trigger: CCATGGAGACCCTGGGGGGCACCACACTGGAGGTGG...GCCCTGCCCAGGTAGAAAGGGTAAGAAGAACATGTAGAATCCAGATTCCCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR TCA 90 bp GGGTCCCTGCTGACCGGCTCTTGGGAAGACTTGGGGGATGAAACAGCTTGCAGGACTGCTTGCAGTTGGTaGAGTATTTCTTGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: GSLLTGSWEDLGDETACRTACSW*SISCWC
Trigger: GCACCAACAAGAAATACTTCACCAACTGCAAGCAGT...CCTGCAAGCTGTTTCATCCCCCAAGTCTTCCCAAGAGCCGGTCAGCAGGGACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000225600.2
CDS-3UTR CCA 90 bp ATTCAATGGTCTCTTTGGCAAACTGAGAGAAACTGGCGGGAAGCTGCTGCAGGGGAGCGGAAGAGCTGCTaGGCAACCTTTCTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: IQWSLWQTERNWREAAAGERKSC*ATFLSW
Trigger: CCAGGAGAGAAAGGTTGCCCAGCAGCTCTTCCGCTC...CCCTGCAGCAGCTTCCCGCCAGTTTCTCTCAGTTTGCCAAAGAGACCATTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CCA 90 bp ATGCCAAGGCTTTCCAGAATGCCGGACTGCTTGATTCACATTTGTGAGCTCCAACCGTTGGTCGCATGGTaGTCAGCCTTCAGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: MPRLSRMPDCLIHICELQPLVAW*SAFSSR
Trigger: CCGGCTGCTGAAGGCTGACCACCATGCGACCAACGG...TTGGAGCTCACAAATGTGAATCAAGCAGTCCGGCATTCTGGAAAGCCTTGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CCA 90 bp CTCAGGGAATCTGGATTCTACATGTTCTTCTTACCCTTTCTACCTGGGCAGGGCGATGCACCACGCCGTTaGTCGCATGGTGGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: LRESGFYMFFLPFLPGQGDAPRR*SHGGQP
Trigger: AGGCTGACCACCATGCGACCAACGGCGTGGTGCATC...GCCCTGCCCAGGTAGAAAGGGTAAGAAGAACATGTAGAATCCAGATTCCCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CCA 90 bp TACCTGGGCAGGGCCAATATAGAAGCATCCAAACCATGTGTGGACACAAGACATACGCCGTTGGTCGCATaGTGGTCAGCCTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: YLGRANIEASKPCVDTRHTPLVA*WSAFSS
Trigger: GCTGCTGAAGGCTGACCACCATGCGACCAACGGCGT...ATGTCTTGTGTCCACACATGGTTTGGATGCTTCTATATTGGCCCTGCCCAGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CCA 90 bp CAAGAGCTTTACAGAACCATGCCAAGGCTTTCCAGAATGCCGGACTGCTTGATTGATGCACCACGCCGTTaGTCGCATGGTGGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: QELYRTMPRLSRMPDCLIDAPRR*SHGGQP
Trigger: AGGCTGACCACCATGCGACCAACGGCGTGGTGCATC...AATCAAGCAGTCCGGCATTCTGGAAAGCCTTGGCATGGTTCTGTAAAGCTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CCA 90 bp CTCAGGGAATCTGGATTCTACATGTTCTTCTTACCCTTTCTACCTGGGCAGGGCATGAGTCCTGCAGACTaGATGGCGGCCACCAGCATG +
Preference number: 4 (lower is better)
Translates to: LRESGFYMFFLPFLPGQGMSPAD*MAATSM
Trigger: CATGCTGGTGGCCGCCATCCAGTCTGCAGGACTCAT...GCCCTGCCCAGGTAGAAAGGGTAAGAAGAACATGTAGAATCCAGATTCCCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CCA 90 bp TGGCGGGAAGCTGCTGCAGGGCTCTCCTCCTCGGTCTTCCTGCTAATGCTTCATCTTGGAACGCTTCATTaGTGGGAGCAAAAACAGTGT +
Preference number: 4 (lower is better)
Translates to: WREAAAGLSSSVFLLMLHLGTLH*WEQKQC
Trigger: ACACTGTTTTTGCTCCCACCAATGAAGCGTTCCAAG...ATGAAGCATTAGCAGGAAGACCGAGGAGGAGAGCCCTGCAGCAGCTTCCCGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000225600.2
CDS-3UTR GCA 90 bp TACCTGGGCAGGGCCAATATAGAAGCATCCAAACCATGTGTGGACACAAGACATGTGAGGGTCATGCCGTaGTTGAGCTCATCGGTCAGG +
Preference number: 4 (lower is better)
Translates to: YLGRANIEASKPCVDTRHVRVMP*LSSSVR
Trigger: CCTGACCGATGAGCTCAAGCACGGCATGACCCTCAC...ATGTCTTGTGTCCACACATGGTTTGGATGCTTCTATATTGGCCCTGCCCAGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR GCA 90 bp ATTCAATGGTCTCTTTGGCAAACTGAGAGAAACTGGCGGGAAGCTGCTGCAGGGACCTTGTCAATGAGATaGACCACGCCGTTGGTCGCA +
Preference number: 4 (lower is better)
Translates to: IQWSLWQTERNWREAAAGTLSMR*TTPLVA
Trigger: TGCGACCAACGGCGTGGTGCATCTCATTGACAAGGT...CCCTGCAGCAGCTTCCCGCCAGTTTCTCTCAGTTTGCCAAAGAGACCATTGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR GCA 90 bp AAGAACCTTTCTCCCCTTAACCCCTTCCCTACCCGTCCAAGGCTCAGATCTCAATTCAAGGGCAGAGTCTaGCAGCTCATCTCCTCGTTC +
Preference number: 4 (lower is better)
Translates to: KNLSPLNPFPTRPRLRSQFKGRV*QLISSF
Trigger: GAACGAGGAGATGAGCTGGCAGACTCTGCCCTTGAA...TTGAGATCTGAGCCTTGGACGGGTAGGGAAGGGGTTAAGGGGAGAAAGGTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045173.10
CDS-3UTR CCA 90 bp TCTACATGTTCTTCTTACCCTTTCTACCTGGGCAGGGCCAATATAGAAGCATCCACGCCGTTGGTCGCATaGTGGTCAGCCTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: STCSSYPFYLGRANIEASTPLVA*WSAFSS
Trigger: GCTGCTGAAGGCTGACCACCATGCGACCAACGGCGT...GGATGCTTCTATATTGGCCCTGCCCAGGTAGAAAGGGTAAGAAGAACATGTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR TCA 90 bp TATGACTGCCAGATCTGTATATTCAATGGGTTAACAACCACGTTTGGAGGGATCGGGTCATGCCGTGCTTaGGCTCATCGGTCAGGACCC +
Preference number: 4 (lower is better)
Translates to: YDCQICIFNGLTTTFGGIGSCRA*AHRSGP
Trigger: GGGTCCTGACCGATGAGCTCAAGCACGGCATGACCC...GATCCCTCCAAACGTGGTTGTTAACCCATTGAATATACAGATCTGGCAGTCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR GCA 90 bp GGGTCCCTCACACTCAGGGAATCTGGATTCTACATGTTCTTCTTACCCTTTCTAGTGAGGGTCATGCCGTaGTTGAGCTCATCGGTCAGG +
Preference number: 4 (lower is better)
Translates to: GSLTLRESGFYMFFLPFLVRVMP*LSSSVR
Trigger: CCTGACCGATGAGCTCAAGCACGGCATGACCCTCAC...TAGAAAGGGTAAGAAGAACATGTAGAATCCAGATTCCCTGAGTGTGAGGGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CCA 90 bp AAGAACCTTTCTCCCCTTAACCCCTTCCCTACCCGTCCAAGGCTCAGATCTCAACTGTATACAGCTGTGTaGTGGTCGATCCCACAACTC +
Preference number: 4 (lower is better)
Translates to: KNLSPLNPFPTRPRLRSQLYTAV*WSIPQL
Trigger: GAGTTGTGGGATCGACCACCACACAGCTGTATACAG...TTGAGATCTGAGCCTTGGACGGGTAGGGAAGGGGTTAAGGGGAGAAAGGTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CCA 90 bp GGGTCCCTCACACTCAGGGAATCTGGATTCTACATGTTCTTCTTACCCTTTCTAGTCTCTCAGTGCCTCTaGGTCACCCAGGATGCGGTT +
Preference number: 4 (lower is better)
Translates to: GSLTLRESGFYMFFLPFLVSQCL*VTQDAV
Trigger: AACCGCATCCTGGGTGACCCAGAGGCACTGAGAGAC...TAGAAAGGGTAAGAAGAACATGTAGAATCCAGATTCCCTGAGTGTGAGGGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CCA 90 bp CAGGGAATCTGGATTCTACATGTTCTTCTTACCCTTTCTACCTGGGCAGGGCCATGGCCTCAGCACACATaGCTGACTTCAGGATGTGGT +
Preference number: 4 (lower is better)
Translates to: QGIWILHVLLTLSTWAGPWPQHT*LTSGCG
Trigger: ACCACATCCTGAAGTCAGCCATGTGTGCTGAGGCCA...TGGCCCTGCCCAGGTAGAAAGGGTAAGAAGAACATGTAGAATCCAGATTCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CCA 90 bp CTCCTCGGTCTTCCTGCTAATGCTTCATCCTCTCCAGTAACCGCTGATAGACAGACATTCCAGCTACAATaGCCTCAGCACACATGGCTG +
Preference number: 4 (lower is better)
Translates to: LLGLPANASSSPVTADRQTFQLQ*PQHTWL
Trigger: CAGCCATGTGTGCTGAGGCCATTGTAGCTGGAATGT...CTGTCTATCAGCGGTTACTGGAGAGGATGAAGCATTAGCAGGAAGACCGAGGAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225600.2
CDS-3UTR CCA 90 bp TTCTACCTGGGCAGGGCCAATATAGAAGCATCCAAACCATGTGTGGACACAAGACCCCCAGGGTCTCCATaGACATTCCAGCTACAATGG +
Preference number: 4 (lower is better)
Translates to: FYLGRANIEASKPCVDTRPPGSP*TFQLQW
Trigger: CCATTGTAGCTGGAATGTCCATGGAGACCCTGGGGG...TCTTGTGTCCACACATGGTTTGGATGCTTCTATATTGGCCCTGCCCAGGTAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CCA 90 bp CTCAGGGAATCTGGATTCTACATGTTCTTCTTACCCTTTCTACCTGGGCAGGGCTCTGGAGGCATGGCTTaGAACGCTTCATTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: LRESGFYMFFLPFLPGQGSGGMA*NASLVG
Trigger: TCCCACCAATGAAGCGTTCCAAGCCATGCCTCCAGA...GCCCTGCCCAGGTAGAAAGGGTAAGAAGAACATGTAGAATCCAGATTCCCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR TCA 90 bp CTCCTCGGTCTTCCTGCTAATGCTTCATCCTCTCCAGTAACCGCTGATAGACAGAGCTCATCAATGAAATaGATGACACCGTTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: LLGLPANASSSPVTADRQSSSMK*MTPLVA
Trigger: GGCCACCAACGGTGTCATTCATTTCATTGATGAGCT...CTGTCTATCAGCGGTTACTGGAGAGGATGAAGCATTAGCAGGAAGACCGAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225600.2
CDS-3UTR GCA 90 bp CAATATAGAAGCATCCAAACCATGTGTGGACACAAGACATACTTGACAGAAACACCACCTCCAGTGTGGTaGCCCCCAGGGTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: QYRSIQTMCGHKTYLTETPPPVW*PPGSPW
Trigger: CCATGGAGACCCTGGGGGGCACCACACTGGAGGTGG...TGTTTCTGTCAAGTATGTCTTGTGTCCACACATGGTTTGGATGCTTCTATATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR GCA 90 bp AGCTATGACTGCCAGATCTGTATATTCAATGGGTTAACAACCACGTTTGGAGGGGATCTCCATGAGTCCTaGAGACTGGATGGCGGCCAC +
Preference number: 4 (lower is better)
Translates to: SYDCQICIFNGLTTTFGGDLHES*RLDGGH
Trigger: GTGGCCGCCATCCAGTCTGCAGGACTCATGGAGATC...CCCTCCAAACGTGGTTGTTAACCCATTGAATATACAGATCTGGCAGTCATAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CCA 90 bp CAAGAGCTTTACAGAACCATGCCAAGGCTTTCCAGAATGCCGGACTGCTTGATTCCGCAGATCTTCCTCTaGTACCACTGCTTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: QELYRTMPRLSRMPDCLIPQIFL*YHCLQL
Trigger: CAACTGCAAGCAGTGGTACCAGAGGAAGATCTGCGG...AATCAAGCAGTCCGGCATTCTGGAAAGCCTTGGCATGGTTCTGTAAAGCTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CCA 90 bp GAATCTGGATTCTACATGTTCTTCTTACCCTTTCTACCTGGGCAGGGCCAATATGAGCGGAAGAGCTGCTaGGCAACCTTTCTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: ESGFYMFFLPFLPGQGQYERKSC*ATFLSW
Trigger: CCAGGAGAGAAAGGTTGCCCAGCAGCTCTTCCGCTC...ATATTGGCCCTGCCCAGGTAGAAAGGGTAAGAAGAACATGTAGAATCCAGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CCA 90 bp CTCAGGGAATCTGGATTCTACATGTTCTTCTTACCCTTTCTACCTGGGCAGGGCCTGTATACAGCTGTGTaGTGGTCGATCCCACAACTC +
Preference number: 4 (lower is better)
Translates to: LRESGFYMFFLPFLPGQGLYTAV*WSIPQL
Trigger: GAGTTGTGGGATCGACCACCACACAGCTGTATACAG...GCCCTGCCCAGGTAGAAAGGGTAAGAAGAACATGTAGAATCCAGATTCCCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CCA 90 bp CAACTCATAGCTTATAGTGATGCCGTTTCTCCAGCGGTACAAGAGCTTTACAGAGTCTCTCAGTGCCTCTaGGTCACCCAGGATGCGGTT +
Preference number: 4 (lower is better)
Translates to: QLIAYSDAVSPAVQELYRVSQCL*VTQDAV
Trigger: AACCGCATCCTGGGTGACCCAGAGGCACTGAGAGAC...TCTGTAAAGCTCTTGTACCGCTGGAGAAACGGCATCACTATAAGCTATGAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CCA 90 bp CTGGGCAGGGCCAATATAGAAGCATCCAAACCATGTGTGGACACAAGACATACTTGGCCTCAGCACACATaGCTGACTTCAGGATGTGGT +
Preference number: 4 (lower is better)
Translates to: LGRANIEASKPCVDTRHTWPQHT*LTSGCG
Trigger: ACCACATCCTGAAGTCAGCCATGTGTGCTGAGGCCA...AGTATGTCTTGTGTCCACACATGGTTTGGATGCTTCTATATTGGCCCTGCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CCA 90 bp AGAACCATGCCAAGGCTTTCCAGAATGCCGGACTGCTTGATTCACATTTGTGAGGGATGTCAATGGCAGTaGAGACGTCAGATTCCCCAG +
Preference number: 4 (lower is better)
Translates to: RTMPRLSRMPDCLIHICEGCQWQ*RRQIPQ
Trigger: CTGGGGAATCTGACGTCTCCACTGCCATTGACATCC...CTCACAAATGTGAATCAAGCAGTCCGGCATTCTGGAAAGCCTTGGCATGGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CCA 90 bp GTTCAACTCATAGCTTATAGTGATGCCGTTTCTCCAGCGGTACAAGAGCTTTACATGAGTCCTGCAGACTaGATGGCGGCCACCAGCATG +
Preference number: 4 (lower is better)
Translates to: VQLIAYSDAVSPAVQELYMSPAD*MAATSM
Trigger: CATGCTGGTGGCCGCCATCCAGTCTGCAGGACTCAT...GTAAAGCTCTTGTACCGCTGGAGAAACGGCATCACTATAAGCTATGAGTTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CCA 90 bp TCTGGATTCTACATGTTCTTCTTACCCTTTCTACCTGGGCAGGGCCAATATAGAAGTCGCACAGACCTCTaGGCAGCCCTGGAATACGCT +
Preference number: 4 (lower is better)
Translates to: SGFYMFFLPFLPGQGQYRSRTDL*AALEYA
Trigger: AGCGTATTCCAGGGCTGCCCAGAGGTCTGTGCGACT...TCTATATTGGCCCTGCCCAGGTAGAAAGGGTAAGAAGAACATGTAGAATCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045173.10
CDS-3UTR CCA 90 bp CTCCTCGGTCTTCCTGCTAATGCTTCATCCTCTCCAGTAACCGCTGATAGACAGAAAGGAAAAACAGCCTaGCGGCTGCAGAACAGTGTT +
Preference number: 4 (lower is better)
Translates to: LLGLPANASSSPVTADRQKGKTA*RLQNSV
Trigger: AACACTGTTCTGCAGCCGCCAGGCTGTTTTTCCTTT...CTGTCTATCAGCGGTTACTGGAGAGGATGAAGCATTAGCAGGAAGACCGAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000225600.2
CDS-3UTR TCA 90 bp CAATATAGAAGCATCCAAACCATGTGTGGACACAAGACATACTTGACAGAAACAGGGTCATGCCGTGCTTaGGCTCATCGGTCAGGACCC +
Preference number: 4 (lower is better)
Translates to: QYRSIQTMCGHKTYLTETGSCRA*AHRSGP
Trigger: GGGTCCTGACCGATGAGCTCAAGCACGGCATGACCC...TGTTTCTGTCAAGTATGTCTTGTGTCCACACATGGTTTGGATGCTTCTATATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR TCA 90 bp TCTGGATTCTACATGTTCTTCTTACCCTTTCTACCTGGGCAGGGCCAATATAGACACCGTTTGTGGCCATaGTGTCGGTTTCGGCAACAG +
Preference number: 4 (lower is better)
Translates to: SGFYMFFLPFLPGQGQYRHRLWP*CRFRQQ
Trigger: CTGTTGCCGAAACCGACATCATGGCCACAAACGGTG...TCTATATTGGCCCTGCCCAGGTAGAAAGGGTAAGAAGAACATGTAGAATCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR GCA 90 bp CTCACACTCAGGGAATCTGGATTCTACATGTTCTTCTTACCCTTTCTACCTGGGACCTTGTCAATGAGATaGACCACGCCGTTGGTCGCA +
Preference number: 4 (lower is better)
Translates to: LTLRESGFYMFFLPFLPGTLSMR*TTPLVA
Trigger: TGCGACCAACGGCGTGGTGCATCTCATTGACAAGGT...CCCAGGTAGAAAGGGTAAGAAGAACATGTAGAATCCAGATTCCCTGAGTGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR GCA 90 bp GGCCAATATAGAAGCATCCAAACCATGTGTGGACACAAGACATACTTGACAGAAGATCTCCATGAGTCCTaGAGACTGGATGGCGGCCAC +
Preference number: 4 (lower is better)
Translates to: GQYRSIQTMCGHKTYLTEDLHES*RLDGGH
Trigger: GTGGCCGCCATCCAGTCTGCAGGACTCATGGAGATC...TTCTGTCAAGTATGTCTTGTGTCCACACATGGTTTGGATGCTTCTATATTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CCA 90 bp CTACCTGGGCAGGGCCAATATAGAAGCATCCAAACCATGTGTGGACACAAGACATGGATGTTGGAATTCTaGTACATGGAGGTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: LPGQGQYRSIQTMCGHKTWMLEF*YMEVRV
Trigger: GACCCTCACCTCCATGTACCAGAATTCCAACATCCA...TGTCTTGTGTCCACACATGGTTTGGATGCTTCTATATTGGCCCTGCCCAGGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CCA 90 bp AGTCGCACAGACCTCTGGGCAGCCCTGGAATACGCTGACGCCTGTTTGAAGATTATTTCAATGATCTGCTaGATGTTGTTGGTGATGGTG +
Preference number: 4 (lower is better)
Translates to: SRTDLWAALEYADACLKIISMIC*MLLVMV
Trigger: CACCATCACCAACAACATCCAGCAGATCATTGAAAT...AATCTTCAAACAGGCGTCAGCGTATTCCAGGGCTGCCCAGAGGTCTGTGCGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225600.2
CDS-3UTR CCA 90 bp CTCAGGGAATCTGGATTCTACATGTTCTTCTTACCCTTTCTACCTGGGCAGGGCGCTGACTTCAGGATGTaGTTGTTTAGCAGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: LRESGFYMFFLPFLPGQGADFRM*LFSRSL
Trigger: GAGAGACCTGCTAAACAACCACATCCTGAAGTCAGC...GCCCTGCCCAGGTAGAAAGGGTAAGAAGAACATGTAGAATCCAGATTCCCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CCA 90 bp GGGTCCCTCACACTCAGGGAATCTGGATTCTACATGTTCTTCTTACCCTTTCTATCTGGAGGCATGGCTTaGAACGCTTCATTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: GSLTLRESGFYMFFLPFLSGGMA*NASLVG
Trigger: TCCCACCAATGAAGCGTTCCAAGCCATGCCTCCAGA...TAGAAAGGGTAAGAAGAACATGTAGAATCCAGATTCCCTGAGTGTGAGGGACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
3UTR CAA 72 bp AGAACCATGCCAAGGCTTTCCAGAATGCCGGACTGCTaGATTCACATTTGTGAGCTCCAAGATGCCGTAGTT +
Preference number: 4 (lower is better)
Translates to: RTMPRLSRMPDC*IHICELQDAVV
Trigger: AACTACGGCATCTTGGAGCTCACAAATGTGAATCAAGCAGTCCGGCATTCTGGAAAGCCTTGGCATGGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR TCA 90 bp GTTCAACTCATAGCTTATAGTGATGCCGTTTCTCCAGCGGTACAAGAGCTTTACGCTGCAGAACAGTGTTaGTGGCATAGACCACACCGT +
Preference number: 4 (lower is better)
Translates to: VQLIAYSDAVSPAVQELYAAEQC*WHRPHR
Trigger: ACGGTGTGGTCTATGCCATCAACACTGTTCTGCAGC...GTAAAGCTCTTGTACCGCTGGAGAAACGGCATCACTATAAGCTATGAGTTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR GCA 90 bp TTACAGAACCATGCCAAGGCTTTCCAGAATGCCGGACTGCTTGATTCACATTTGGTGCCAATGACCTTCTaGACAGCACATACATTGGGG +
Preference number: 4 (lower is better)
Translates to: LQNHAKAFQNAGLLDSHLVPMTF*TAHTLG
Trigger: CCCCAATGTATGTGCTGTGCAGAAGGTCATTGGCAC...CAAATGTGAATCAAGCAGTCCGGCATTCTGGAAAGCCTTGGCATGGTTCTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR GCA 90 bp CAGGGAATCTGGATTCTACATGTTCTTCTTACCCTTTCTACCTGGGCAGGGCCATTCCTCTGGTACCACTaGTTGCAGTTGGTGAAGTAT +
Preference number: 4 (lower is better)
Translates to: QGIWILHVLLTLSTWAGPFLWYH*LQLVKY
Trigger: ATACTTCACCAACTGCAAGCAGTGGTACCAGAGGAA...TGGCCCTGCCCAGGTAGAAAGGGTAAGAAGAACATGTAGAATCCAGATTCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR GCA 90 bp TACAGAACCATGCCAAGGCTTTCCAGAATGCCGGACTGCTTGATTCACATTTGTGCCTCAGCTTTTCTGTaGGGTCTGTATACAGCTGTG +
Preference number: 4 (lower is better)
Translates to: YRTMPRLSRMPDCLIHICASAFL*GLYTAV
Trigger: CACAGCTGTATACAGACCGCACAGAAAAGCTGAGGC...ACAAATGTGAATCAAGCAGTCCGGCATTCTGGAAAGCCTTGGCATGGTTCTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CCA 90 bp GTTCAACTCATAGCTTATAGTGATGCCGTTTCTCCAGCGGTACAAGAGCTTTACCCGCAGATCTTCCTCTaGTACCACTGCTTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: VQLIAYSDAVSPAVQELYPQIFL*YHCLQL
Trigger: CAACTGCAAGCAGTGGTACCAGAGGAAGATCTGCGG...GTAAAGCTCTTGTACCGCTGGAGAAACGGCATCACTATAAGCTATGAGTTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CCA 90 bp CTCACACTCAGGGAATCTGGATTCTACATGTTCTTCTTACCCTTTCTACCTGGGACATTCCAGCTACAATaGCCTCAGCACACATGGCTG +
Preference number: 4 (lower is better)
Translates to: LTLRESGFYMFFLPFLPGTFQLQ*PQHTWL
Trigger: CAGCCATGTGTGCTGAGGCCATTGTAGCTGGAATGT...CCCAGGTAGAAAGGGTAAGAAGAACATGTAGAATCCAGATTCCCTGAGTGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CCA 90 bp TCTGGATTCTACATGTTCTTCTTACCCTTTCTACCTGGGCAGGGCCAATATAGAGGATGTCAATGGCAGTaGAGACGTCAGATTCCCCAG +
Preference number: 4 (lower is better)
Translates to: SGFYMFFLPFLPGQGQYRGCQWQ*RRQIPQ
Trigger: CTGGGGAATCTGACGTCTCCACTGCCATTGACATCC...TCTATATTGGCCCTGCCCAGGTAGAAAGGGTAAGAAGAACATGTAGAATCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR TCA 90 bp GGCCAATATAGAAGCATCCAAACCATGTGTGGACACAAGACATACTTGACAGAAGCTGCAGAACAGTGTTaGTGGCATAGACCACACCGT +
Preference number: 4 (lower is better)
Translates to: GQYRSIQTMCGHKTYLTEAAEQC*WHRPHR
Trigger: ACGGTGTGGTCTATGCCATCAACACTGTTCTGCAGC...TTCTGTCAAGTATGTCTTGTGTCCACACATGGTTTGGATGCTTCTATATTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR GCA 90 bp GAATCTGGATTCTACATGTTCTTCTTACCCTTTCTACCTGGGCAGGGCCAATATGTGCCAATGACCTTCTaGACAGCACATACATTGGGG +
Preference number: 4 (lower is better)
Translates to: ESGFYMFFLPFLPGQGQYVPMTF*TAHTLG
Trigger: CCCCAATGTATGTGCTGTGCAGAAGGTCATTGGCAC...ATATTGGCCCTGCCCAGGTAGAAAGGGTAAGAAGAACATGTAGAATCCAGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR GCA 90 bp ATGCCAAGGCTTTCCAGAATGCCGGACTGCTTGATTCACATTTGTGAGCTCCAATTCCTCTGGTACCACTaGTTGCAGTTGGTGAAGTAT +
Preference number: 4 (lower is better)
Translates to: MPRLSRMPDCLIHICELQFLWYH*LQLVKY
Trigger: ATACTTCACCAACTGCAAGCAGTGGTACCAGAGGAA...TTGGAGCTCACAAATGTGAATCAAGCAGTCCGGCATTCTGGAAAGCCTTGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR GCA 90 bp AAGAACCTTTCTCCCCTTAACCCCTTCCCTACCCGTCCAAGGCTCAGATCTCAATCGATTTCAATGATCTaGTGGATGTTGTTGGTGATG +
Preference number: 4 (lower is better)
Translates to: KNLSPLNPFPTRPRLRSQSISMI*WMLLVM
Trigger: CATCACCAACAACATCCAGCAGATCATTGAAATCGA...TTGAGATCTGAGCCTTGGACGGGTAGGGAAGGGGTTAAGGGGAGAAAGGTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CCA 90 bp ATTCAATGGTCTCTTTGGCAAACTGAGAGAAACTGGCGGGAAGCTGCTGCAGGGATTTCAATGATCTGCTaGATGTTGTTGGTGATGGTG +
Preference number: 4 (lower is better)
Translates to: IQWSLWQTERNWREAAAGISMIC*MLLVMV
Trigger: CACCATCACCAACAACATCCAGCAGATCATTGAAAT...CCCTGCAGCAGCTTCCCGCCAGTTTCTCTCAGTTTGCCAAAGAGACCATTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CCA 90 bp TGCAGCCCATGTATGTTGAAGTGTGCTCTTTGGTTTCAAAAACATTCAATGGTCCCCCCAGGGTCTCCATaGACATTCCAGCTACAATGG +
Preference number: 4 (lower is better)
Translates to: CSPCMLKCALWFQKHSMVPPGSP*TFQLQW
Trigger: CCATTGTAGCTGGAATGTCCATGGAGACCCTGGGGG...GACCATTGAATGTTTTTGAAACCAAAGAGCACACTTCAACATACATGGGCTGCA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CCA 90 bp CTTCCTGCTAATGCTTCATCCTCTCCAGTAACCGCTGATAGACAGGGGCAAGTCTGTTCTTTGACCATGTaGTTCAGAAGCAAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: LPANASSSPVTADRQGQVCSLTM*FRSKVF
Trigger: GAAGACTTTGCTTCTGAACCACATGGTCAAAGAACA...GACTTGCCCCTGTCTATCAGCGGTTACTGGAGAGGATGAAGCATTAGCAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225600.2
CDS-3UTR TCA 90 bp GAATCTGGATTCTACATGTTCTTCTTACCCTTTCTACCTGGGCAGGGCCAATATTCTTGTTGGTGCCAATaGCCTTCTGCACAGCACATA +
Preference number: 4 (lower is better)
Translates to: ESGFYMFFLPFLPGQGQYSCWCQ*PSAQHI
Trigger: TATGTGCTGTGCAGAAGGTCATTGGCACCAACAAGA...ATATTGGCCCTGCCCAGGTAGAAAGGGTAAGAAGAACATGTAGAATCCAGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR TCA 90 bp GTCCCTCACACTCAGGGAATCTGGATTCTACATGTTCTTCTTACCCTTTCTACCACTGCTTGCAGTTGGTaGAGTATTTCTTGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: VPHTQGIWILHVLLTLSTTACSW*SISCWC
Trigger: GCACCAACAAGAAATACTTCACCAACTGCAAGCAGT...GGTAGAAAGGGTAAGAAGAACATGTAGAATCCAGATTCCCTGAGTGTGAGGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR TCA 90 bp GTCCCTCACACTCAGGGAATCTGGATTCTACATGTTCTTCTTACCCTTTCTACCTGTCCTCGATTTCAATaGTCTGCTGGATGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: VPHTQGIWILHVLLTLSTCPRFQ*SAGCCW
Trigger: CCAACAACATCCAGCAGATCATTGAAATCGAGGACA...GGTAGAAAGGGTAAGAAGAACATGTAGAATCCAGATTCCCTGAGTGTGAGGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR TCA 90 bp TCTACATGTTCTTCTTACCCTTTCTACCTGGGCAGGGCCAATATAGAAGCATCCTGTCCTCGATTTCAATaGTCTGCTGGATGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: STCSSYPFYLGRANIEASCPRFQ*SAGCCW
Trigger: CCAACAACATCCAGCAGATCATTGAAATCGAGGACA...GGATGCTTCTATATTGGCCCTGCCCAGGTAGAAAGGGTAAGAAGAACATGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR TCA 90 bp TCTGGATTCTACATGTTCTTCTTACCCTTTCTACCTGGGCAGGGCCAATATAGAAGCTCATCAATGAAATaGATGACACCGTTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SGFYMFFLPFLPGQGQYRSSSMK*MTPLVA
Trigger: GGCCACCAACGGTGTCATTCATTTCATTGATGAGCT...TCTATATTGGCCCTGCCCAGGTAGAAAGGGTAAGAAGAACATGTAGAATCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR TCA 90 bp GAATCTGGATTCTACATGTTCTTCTTACCCTTTCTACCTGGGCAGGGCCAATATAGGCCAACTGTTCTTTaGCCATGTGGTTCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: ESGFYMFFLPFLPGQGQYRPTVL*PCGSEA
Trigger: TGCTTCTGAACCACATGGTCAAAGAACAGTTGGCCT...ATATTGGCCCTGCCCAGGTAGAAAGGGTAAGAAGAACATGTAGAATCCAGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CCA 90 bp CAACTCATAGCTTATAGTGATGCCGTTTCTCCAGCGGTACAAGAGCTTTACAGATGGATGTTGGAATTCTaGTACATGGAGGTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: QLIAYSDAVSPAVQELYRWMLEF*YMEVRV
Trigger: GACCCTCACCTCCATGTACCAGAATTCCAACATCCA...TCTGTAAAGCTCTTGTACCGCTGGAGAAACGGCATCACTATAAGCTATGAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CCA 90 bp GTCCCTCACACTCAGGGAATCTGGATTCTACATGTTCTTCTTACCCTTTCTACCGATGGATCTGGATGTTaGAATTCTGGTACATGGAGG +
Preference number: 4 (lower is better)
Translates to: VPHTQGIWILHVLLTLSTDGSGC*NSGTWR
Trigger: CCTCCATGTACCAGAATTCCAACATCCAGATCCATC...GGTAGAAAGGGTAAGAAGAACATGTAGAATCCAGATTCCCTGAGTGTGAGGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CCA 90 bp GTTCAACTCATAGCTTATAGTGATGCCGTTTCTCCAGCGGTACAAGAGCTTTACGCTGACTTCAGGATGTaGTTGTTTAGCAGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: VQLIAYSDAVSPAVQELYADFRM*LFSRSL
Trigger: GAGAGACCTGCTAAACAACCACATCCTGAAGTCAGC...GTAAAGCTCTTGTACCGCTGGAGAAACGGCATCACTATAAGCTATGAGTTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CCA 90 bp CAACTCATAGCTTATAGTGATGCCGTTTCTCCAGCGGTACAAGAGCTTTACAGATTTGTTCAGTTCTTCTaGAGGCATGGCTTGGAACGC +
Preference number: 4 (lower is better)
Translates to: QLIAYSDAVSPAVQELYRFVQFF*RHGLER
Trigger: GCGTTCCAAGCCATGCCTCCAGAAGAACTGAACAAA...TCTGTAAAGCTCTTGTACCGCTGGAGAAACGGCATCACTATAAGCTATGAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CCA 90 bp ATTCAATGGTCTCTTTGGCAAACTGAGAGAAACTGGCGGGAAGCTGCTGCAGGGATTTCATCACCAATGTaGTACTTCAGGATGTTGGTA +
Preference number: 4 (lower is better)
Translates to: IQWSLWQTERNWREAAAGISSPM*YFRMLV
Trigger: TACCAACATCCTGAAGTACCACATTGGTGATGAAAT...CCCTGCAGCAGCTTCCCGCCAGTTTCTCTCAGTTTGCCAAAGAGACCATTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR TCA 90 bp AATCTGGATTCTACATGTTCTTCTTACCCTTTCTACCTGGGCAGGGCCAATATATCTTGTTGGTGCCAATaGCCTTCTGCACAGCACATA +
Preference number: 4 (lower is better)
Translates to: NLDSTCSSYPFYLGRANISCWCQ*PSAQHI
Trigger: TATGTGCTGTGCAGAAGGTCATTGGCACCAACAAGA...TATATTGGCCCTGCCCAGGTAGAAAGGGTAAGAAGAACATGTAGAATCCAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR TCA 90 bp GGGAATTTGGTGCCAAGCTATGACTGCCAGATCTGTATATTCAATGGGTTAACAAGGCCAACTGTTCTTTaGCCATGTGGTTCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: GNLVPSYDCQICIFNGLTRPTVL*PCGSEA
Trigger: TGCTTCTGAACCACATGGTCAAAGAACAGTTGGCCT...TGTTAACCCATTGAATATACAGATCTGGCAGTCATAGCTTGGCACCAAATTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR TCA 90 bp GTTCAACTCATAGCTTATAGTGATGCCGTTTCTCCAGCGGTACAAGAGCTTTACCATTGTTTTTCGAGCTaGCTTCCAGTTTGTCCCCTT +
Preference number: 4 (lower is better)
Translates to: VQLIAYSDAVSPAVQELYHCFSS*LPVCPL
Trigger: AAGGGGACAAACTGGAAGTCAGCTCGAAAAACAATG...GTAAAGCTCTTGTACCGCTGGAGAAACGGCATCACTATAAGCTATGAGTTGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR TCA 90 bp TCTGGATTCTACATGTTCTTCTTACCCTTTCTACCTGGGCAGGGCCAATATAGACATTGTTTTTCGAGCTaGCTTCCAGTTTGTCCCCTT +
Preference number: 4 (lower is better)
Translates to: SGFYMFFLPFLPGQGQYRHCFSS*LPVCPL
Trigger: AAGGGGACAAACTGGAAGTCAGCTCGAAAAACAATG...TCTATATTGGCCCTGCCCAGGTAGAAAGGGTAAGAAGAACATGTAGAATCCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR GCA 90 bp AGAACCATGCCAAGGCTTTCCAGAATGCCGGACTGCTTGATTCACATTTGTGAGTCGATTTCAATGATCTaGTGGATGTTGTTGGTGATG +
Preference number: 4 (lower is better)
Translates to: RTMPRLSRMPDCLIHICESISMI*WMLLVM
Trigger: CATCACCAACAACATCCAGCAGATCATTGAAATCGA...CTCACAAATGTGAATCAAGCAGTCCGGCATTCTGGAAAGCCTTGGCATGGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CCA 90 bp GGTCCTTTCGGGAATTTGGTGCCAAGCTATGACTGCCAGATCTGTATATTCAATGATGGATCTGGATGTTaGAATTCTGGTACATGGAGG +
Preference number: 4 (lower is better)
Translates to: GPFGNLVPSYDCQICIFNDGSGC*NSGTWR
Trigger: CCTCCATGTACCAGAATTCCAACATCCAGATCCATC...ATTGAATATACAGATCTGGCAGTCATAGCTTGGCACCAAATTCCCGAAAGGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CCA 90 bp GGTCCTTTCGGGAATTTGGTGCCAAGCTATGACTGCCAGATCTGTATATTCAATCTTGGAACGCTTCATTaGTGGGAGCAAAAACAGTGT +
Preference number: 4 (lower is better)
Translates to: GPFGNLVPSYDCQICIFNLGTLH*WEQKQC
Trigger: ACACTGTTTTTGCTCCCACCAATGAAGCGTTCCAAG...ATTGAATATACAGATCTGGCAGTCATAGCTTGGCACCAAATTCCCGAAAGGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CCA 90 bp GGCCAATATAGAAGCATCCAAACCATGTGTGGACACAAGACATACTTGACAGAATTTGTTCAGTTCTTCTaGAGGCATGGCTTGGAACGC +
Preference number: 4 (lower is better)
Translates to: GQYRSIQTMCGHKTYLTEFVQFF*RHGLER
Trigger: GCGTTCCAAGCCATGCCTCCAGAAGAACTGAACAAA...TTCTGTCAAGTATGTCTTGTGTCCACACATGGTTTGGATGCTTCTATATTGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR TCA 90 bp TTACAGAACCATGCCAAGGCTTTCCAGAATGCCGGACTGCTTGATTCACATTTGCAACAGGCTCCTTATTaGCACTCACTACATTGTTTT +
Preference number: 4 (lower is better)
Translates to: LQNHAKAFQNAGLLDSHLQQAPY*HSLHCF
Trigger: AAAACAATGTAGTGAGTGTCAATAAGGAGCCTGTTG...CAAATGTGAATCAAGCAGTCCGGCATTCTGGAAAGCCTTGGCATGGTTCTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR GCA 90 bp TACCTGGGCAGGGCCAATATAGAAGCATCCAAACCATGTGTGGACACAAGACATTGCAGCTGTTTTCAATaGAGAGGCTATTTCGATAAA +
Preference number: 4 (lower is better)
Translates to: YLGRANIEASKPCVDTRHCSCFQ*RGYFDK
Trigger: TTTATCGAAATAGCCTCTGCATTGAAAACAGCTGCA...ATGTCTTGTGTCCACACATGGTTTGGATGCTTCTATATTGGCCCTGCCCAGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR GCA 90 bp ATGCCAAGGCTTTCCAGAATGCCGGACTGCTTGATTCACATTTGTGAGCTCCAATGCAGCTGTTTTCAATaGAGAGGCTATTTCGATAAA +
Preference number: 4 (lower is better)
Translates to: MPRLSRMPDCLIHICELQCSCFQ*RGYFDK
Trigger: TTTATCGAAATAGCCTCTGCATTGAAAACAGCTGCA...TTGGAGCTCACAAATGTGAATCAAGCAGTCCGGCATTCTGGAAAGCCTTGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CCA 90 bp CAACTCATAGCTTATAGTGATGCCGTTTCTCCAGCGGTACAAGAGCTTTACAGACAGTTACAATCCCATTaGGATAGTGATGGATCTGGA +
Preference number: 4 (lower is better)
Translates to: QLIAYSDAVSPAVQELYRQLQSH*DSDGSG
Trigger: TCCAGATCCATCACTATCCCAATGGGATTGTAACTG...TCTGTAAAGCTCTTGTACCGCTGGAGAAACGGCATCACTATAAGCTATGAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CCA 90 bp AGAACCATGCCAAGGCTTTCCAGAATGCCGGACTGCTTGATTCACATTTGTGAGATTTCATCACCAATGTaGTACTTCAGGATGTTGGTA +
Preference number: 4 (lower is better)
Translates to: RTMPRLSRMPDCLIHICEISSPM*YFRMLV
Trigger: TACCAACATCCTGAAGTACCACATTGGTGATGAAAT...CTCACAAATGTGAATCAAGCAGTCCGGCATTCTGGAAAGCCTTGGCATGGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CCA 90 bp AATCTGGATTCTACATGTTCTTCTTACCCTTTCTACCTGGGCAGGGCCAATATAATCCCACAACTCCCATaGTCTCATACAGATTTGAGA +
Preference number: 4 (lower is better)
Translates to: NLDSTCSSYPFYLGRANIIPQLP*SHTDLR
Trigger: TCTCAAATCTGTATGAGACCATGGGAGTTGTGGGAT...TATATTGGCCCTGCCCAGGTAGAAAGGGTAAGAAGAACATGTAGAATCCAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR TCA 90 bp TATGACTGCCAGATCTGTATATTCAATGGGTTAACAACCACGTTTGGAGGGATCCAACAGGCTCCTTATTaGCACTCACTACATTGTTTT +
Preference number: 4 (lower is better)
Translates to: YDCQICIFNGLTTTFGGIQQAPY*HSLHCF
Trigger: AAAACAATGTAGTGAGTGTCAATAAGGAGCCTGTTG...GATCCCTCCAAACGTGGTTGTTAACCCATTGAATATACAGATCTGGCAGTCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CCA 90 bp TGCAGCCCATGTATGTTGAAGTGTGCTCTTTGGTTTCAAAAACATTCAATGGTCCAGTTACAATCCCATTaGGATAGTGATGGATCTGGA +
Preference number: 4 (lower is better)
Translates to: CSPCMLKCALWFQKHSMVQLQSH*DSDGSG
Trigger: TCCAGATCCATCACTATCCCAATGGGATTGTAACTG...GACCATTGAATGTTTTTGAAACCAAAGAGCACACTTCAACATACATGGGCTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CCA 90 bp AATCTGGATTCTACATGTTCTTCTTACCCTTTCTACCTGGGCAGGGCCAATATATGTTCTTTGACCATGTaGTTCAGAAGCAAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: NLDSTCSSYPFYLGRANICSLTM*FRSKVF
Trigger: GAAGACTTTGCTTCTGAACCACATGGTCAAAGAACA...TATATTGGCCCTGCCCAGGTAGAAAGGGTAAGAAGAACATGTAGAATCCAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
3UTR CAA 72 bp AAGGCTCAGATCTCAATATGGTGCAGCCCATGTATGTaGAAGTGTGCTCTTTGGTTTCAAAAACATTCAATG +
Preference number: 4 (lower is better)
Translates to: KAQISIWCSPCM*KCALWFQKHSM
Trigger: CATTGAATGTTTTTGAAACCAAAGAGCACACTTCAACATACATGGGCTGCACCATATTGAGATCTGAGCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
3UTR CAA 72 bp AATATGGTGCAGCCCATGTATGTTGAAGTGTGCTCTTaGGTTTCAAAAACATTCAATGGTCTCTTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: NMVQPMYVEVCS*VSKTFNGLFGK
Trigger: TTTGCCAAAGAGACCATTGAATGTTTTTGAAACCAAAGAGCACACTTCAACATACATGGGCTGCACCATATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS CCA 90 bp GACCCCGGAGCCGGCTATGCTGCAGCACCAGCTGGTAGGGTGACTTaGCGGGACCTGCAAGGGTCCCAGCGGGGCCCACAGACAGTGCCA +
Preference number: 5 (lower is better)
Translates to: DPGAGYAAAPAGRVT*RDLQGSQRGPQTVP
Trigger: TGGCACTGTCTGTGGGCCCCGCTGGGACCCTTGCAGGTCCCGCCAAGTCACCCTACCAGCTGGTGCTGCAGCATAGCCGGCTCCGGGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS TCA 90 bp CAAGAGTGTGAACTGGCCGTCGCCCTCCAGCACGGTATTGAGTCCTaGTGCAGCCACGGCGGCCCGAAGTGTCTCAAAGGTGTCCTCGAT +
Preference number: 5 (lower is better)
Translates to: QECELAVALQHGIES*CSHGGPKCLKGVLD
Trigger: ATCGAGGACACCTTTGAGACACTTCGGGCCGCCGTGGCTGCATCAGGACTCAATACCGTGCTGGAGGGCGACGGCCAGTTCACACTCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS TCA 90 bp GACAGGGGCAAGTCGCACAGACCTCTGGGCAGCCCTGGAATACGCTaGCGCCTGTTTGAAGATTTCAAGGGCAGAGTCTGCCAGCTCATC +
Preference number: 5 (lower is better)
Translates to: DRGKSHRPLGSPGIR*RLFEDFKGRVCQLI
Trigger: GATGAGCTGGCAGACTCTGCCCTTGAAATCTTCAAACAGGCGTCAGCGTATTCCAGGGCTGCCCAGAGGTCTGTGCGACTTGCCCCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045173.10
CDS TCA 90 bp GTCGCACAGACCTCTGGGCAGCCCTGGAATACGCTGACGCCTGTTTaGAGATTTCAAGGGCAGAGTCTGCCAGCTCATCTCCTCGTTCTT +
Preference number: 5 (lower is better)
Translates to: VAQTSGQPWNTLTPV*RFQGQSLPAHLLVL
Trigger: AAGAACGAGGAGATGAGCTGGCAGACTCTGCCCTTGAAATCTTCAAACAGGCGTCAGCGTATTCCAGGGCTGCCCAGAGGTCTGTGCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045173.10
CDS GCA 90 bp TGCTGGATGTTGTTGGTGATGGTGGAAATGACCTTGTCAATGAGATaGACCACGCCGTTGGTCGCATGGTGGTCAGCCTTCAGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: CWMLLVMVEMTLSMR*TTPLVAWWSAFSSR
Trigger: CCGGCTGCTGAAGGCTGACCACCATGCGACCAACGGCGTGGTGCATCTCATTGACAAGGTCATTTCCACCATCACCAACAACATCCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp AAGAACCTTTCTCCCCTTAACCCCTTCCCTACCCGTCCAAGGCTCAGATCTCAAAGGGTCATGCCGTGCTaGAGCTCATCGGTCAGGACC +
Preference number: 5 (lower is better)
Translates to: KNLSPLNPFPTRPRLRSQRVMPC*SSSVRT
Trigger: GGTCCTGACCGATGAGCTCAAGCACGGCATGACCCT...TTGAGATCTGAGCCTTGGACGGGTAGGGAAGGGGTTAAGGGGAGAAAGGTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp AGAACCATGCCAAGGCTTTCCAGAATGCCGGACTGCTTGATTCACATTTGTGAGAGATGCACCACGCCGTaGGTCGCATGGTGGTCAGCC +
Preference number: 5 (lower is better)
Translates to: RTMPRLSRMPDCLIHICERCTTP*VAWWSA
Trigger: GGCTGACCACCATGCGACCAACGGCGTGGTGCATCT...CTCACAAATGTGAATCAAGCAGTCCGGCATTCTGGAAAGCCTTGGCATGGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp CAAGAGCTTTACAGAACCATGCCAAGGCTTTCCAGAATGCCGGACTGCTTGATTAGATGCACCACGCCGTaGGTCGCATGGTGGTCAGCC +
Preference number: 5 (lower is better)
Translates to: QELYRTMPRLSRMPDCLIRCTTP*VAWWSA
Trigger: GGCTGACCACCATGCGACCAACGGCGTGGTGCATCT...AATCAAGCAGTCCGGCATTCTGGAAAGCCTTGGCATGGTTCTGTAAAGCTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS CCA 90 bp GAAATGACCTTGTCAATGAGATGCACCACGCCGTTGGTCGCATGGTaGTCAGCCTTCAGCAGCCGGGCACAGTTAACAGTTACAATCCCA +
Preference number: 5 (lower is better)
Translates to: EMTLSMRCTTPLVAW*SAFSSRAQLTVTIP
Trigger: TGGGATTGTAACTGTTAACTGTGCCCGGCTGCTGAAGGCTGACCACCATGCGACCAACGGCGTGGTGCATCTCATTGACAAGGTCATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS CCA 90 bp GTGGAAATGACCTTGTCAATGAGATGCACCACGCCGTTGGTCGCATaGTGGTCAGCCTTCAGCAGCCGGGCACAGTTAACAGTTACAATC +
Preference number: 5 (lower is better)
Translates to: VEMTLSMRCTTPLVA*WSAFSSRAQLTVTI
Trigger: GATTGTAACTGTTAACTGTGCCCGGCTGCTGAAGGCTGACCACCATGCGACCAACGGCGTGGTGCATCTCATTGACAAGGTCATTTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp ATTCAATGGTCTCTTTGGCAAACTGAGAGAAACTGGCGGGAAGCTGCTGCAGGGGCCAGGATGTCTTTGTaGGAGATGACAGCCTTCCCG +
Preference number: 5 (lower is better)
Translates to: IQWSLWQTERNWREAAAGARMSL*EMTAFP
Trigger: CGGGAAGGCTGTCATCTCCAACAAAGACATCCTGGC...CCCTGCAGCAGCTTCCCGCCAGTTTCTCTCAGTTTGCCAAAGAGACCATTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp GGGTCCCTGCTGACCGGCTCTTGGGAAGACTTGGGGGATGAAACAGCTTGCAGGGCAACAGGCTCCTTATaGACACTCACTACATTGTTT +
Preference number: 5 (lower is better)
Translates to: GSLLTGSWEDLGDETACRATGSL*TLTTLF
Trigger: AAACAATGTAGTGAGTGTCAATAAGGAGCCTGTTGC...CCTGCAAGCTGTTTCATCCCCCAAGTCTTCCCAAGAGCCGGTCAGCAGGGACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000225600.2
CDS CCA 90 bp TCTCAGGCCTCAGCTTTTCTGTGCGGTCTGTATACAGCTGTGTGGTaGTCGATCCCACAACTCCCATGGTCTCATACAGATTTGAGAGCG +
Preference number: 5 (lower is better)
Translates to: SQASAFLCGLYTAVW*SIPQLPWSHTDLRA
Trigger: CGCTCTCAAATCTGTATGAGACCATGGGAGTTGTGGGATCGACCACCACACAGCTGTATACAGACCGCACAGAAAAGCTGAGGCCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS CCA 90 bp CCTCGTTCTTGTGGTCGGTTGGCTAGAGAGAAAGGAAAAACAGCCTaGCGGCTGCAGAACAGTGTTGATGGCATAGACCACACCGTTTGT +
Preference number: 5 (lower is better)
Translates to: PRSCGRLAREKGKTA*RLQNSVDGIDHTVC
Trigger: ACAAACGGTGTGGTCTATGCCATCAACACTGTTCTGCAGCCGCCAGGCTGTTTTTCCTTTCTCTCTAGCCAACCGACCACAAGAACGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp TTACAGAACCATGCCAAGGCTTTCCAGAATGCCGGACTGCTTGATTCACATTTGAGGGTCATGCCGTGCTaGAGCTCATCGGTCAGGACC +
Preference number: 5 (lower is better)
Translates to: LQNHAKAFQNAGLLDSHLRVMPC*SSSVRT
Trigger: GGTCCTGACCGATGAGCTCAAGCACGGCATGACCCT...CAAATGTGAATCAAGCAGTCCGGCATTCTGGAAAGCCTTGGCATGGTTCTGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp TTATTACAAATGCACCATGGGTCCCTCACACTCAGGGAATCTGGATTCTACATGCCGTTGATGGTGAGCTaGTCCCCACTGCAGCCCACC +
Preference number: 5 (lower is better)
Translates to: LLQMHHGSLTLRESGFYMPLMVS*SPLQPT
Trigger: GGTGGGCTGCAGTGGGGACAAGCTCACCATCAACGG...CATGTAGAATCCAGATTCCCTGAGTGTGAGGGACCCATGGTGCATTTGTAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp ATTCAATGGTCTCTTTGGCAAACTGAGAGAAACTGGCGGGAAGCTGCTGCAGGGCGAGGGACACCATCTTaGAACACAGAATTCAGGGGG +
Preference number: 5 (lower is better)
Translates to: IQWSLWQTERNWREAAAGRGTPS*NTEFRG
Trigger: CCCCCTGAATTCTGTGTTCAAAGATGGTGTCCCTCG...CCCTGCAGCAGCTTCCCGCCAGTTTCTCTCAGTTTGCCAAAGAGACCATTGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS TCA 90 bp TCAACTGTTCTTTCCCAGAGAGATGAGTATCGAGGCCAGCTTGTTTaGGGATGTCAATGGCAGTGGAGACGTCAGATTCCCCAGCCAGCT +
Preference number: 5 (lower is better)
Translates to: STVLSQRDEYRGQLV*GCQWQWRRQIPQPA
Trigger: AGCTGGCTGGGGAATCTGACGTCTCCACTGCCATTGACATCCTCAAACAAGCTGGCCTCGATACTCATCTCTCTGGGAAAGAACAGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS CCA 90 bp CCATCTCAGGCCTCAGCTTTTCTGTGCGGTCTGTATACAGCTGTGTaGTGGTCGATCCCACAACTCCCATGGTCTCATACAGATTTGAGA +
Preference number: 5 (lower is better)
Translates to: PSQASAFLCGLYTAV*WSIPQLPWSHTDLR
Trigger: TCTCAAATCTGTATGAGACCATGGGAGTTGTGGGATCGACCACCACACAGCTGTATACAGACCGCACAGAAAAGCTGAGGCCTGAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS CCA 90 bp ACCAGGGCCCCGATGCCTCCGCTAACCAGGATTTCATCACCAATGTaGTACTTCAGGATGTTGGTAAGTTCCTTGGCATTTGCCAAGAGT +
Preference number: 5 (lower is better)
Translates to: TRAPMPPLTRISSPM*YFRMLVSSLAFAKS
Trigger: ACTCTTGGCAAATGCCAAGGAACTTACCAACATCCTGAAGTACCACATTGGTGATGAAATCCTGGTTAGCGGAGGCATCGGGGCCCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp CTGGGCAGGGCCAATATAGAAGCATCCAAACCATGTGTGGACACAAGACATACTAGTTCGATGTTGACGTaGCTCACCAGGGAGTCCAGC +
Preference number: 5 (lower is better)
Translates to: LGRANIEASKPCVDTRHTSSMLT*LTRESS
Trigger: GCTGGACTCCCTGGTGAGCAACGTCAACATCGAACT...AGTATGTCTTGTGTCCACACATGGTTTGGATGCTTCTATATTGGCCCTGCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp CTACCTGGGCAGGGCCAATATAGAAGCATCCAAACCATGTGTGGACACAAGACAGTGGCCAGGATGTCTTaGTTGGAGATGACAGCCTTC +
Preference number: 5 (lower is better)
Translates to: LPGQGQYRSIQTMCGHKTVARMS*LEMTAF
Trigger: GAAGGCTGTCATCTCCAACAAAGACATCCTGGCCAC...TGTCTTGTGTCCACACATGGTTTGGATGCTTCTATATTGGCCCTGCCCAGGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp AAGAACCTTTCTCCCCTTAACCCCTTCCCTACCCGTCCAAGGCTCAGATCTCAAGAGGCCAACTGTTCTTaGACCATGTGGTTCAGAAGC +
Preference number: 5 (lower is better)
Translates to: KNLSPLNPFPTRPRLRSQEANCS*TMWFRS
Trigger: GCTTCTGAACCACATGGTCAAAGAACAGTTGGCCTC...TTGAGATCTGAGCCTTGGACGGGTAGGGAAGGGGTTAAGGGGAGAAAGGTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp CTTCCTGCTAATGCTTCATCCTCTCCAGTAACCGCTGATAGACAGGGGCAAGTCGAGGCCAACTGTTCTTaGACCATGTGGTTCAGAAGC +
Preference number: 5 (lower is better)
Translates to: LPANASSSPVTADRQGQVEANCS*TMWFRS
Trigger: GCTTCTGAACCACATGGTCAAAGAACAGTTGGCCTC...GACTTGCCCCTGTCTATCAGCGGTTACTGGAGAGGATGAAGCATTAGCAGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225600.2
CDS CCA 90 bp TGTCCAGAGTACAGATACTTGGAGGCCAACTGTTCTTTGACCATGTaGTTCAGAAGCAAAGTCTTCATCTGGGCGTCGATGCGAGGGACA +
Preference number: 5 (lower is better)
Translates to: CPEYRYLEANCSLTM*FRSKVFIWASMRGT
Trigger: TGTCCCTCGCATCGACGCCCAGATGAAGACTTTGCTTCTGAACCACATGGTCAAAGAACAGTTGGCCTCCAAGTATCTGTACTCTGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp CAGCCCATGTATGTTGAAGTGTGCTCTTTGGTTTCAAAAACATTCAATGGTCTCCCGTTGATGGTGAGCTaGTCCCCACTGCAGCCCACC +
Preference number: 5 (lower is better)
Translates to: QPMYVEVCSLVSKTFNGLPLMVS*SPLQPT
Trigger: GGTGGGCTGCAGTGGGGACAAGCTCACCATCAACGG...GAGACCATTGAATGTTTTTGAAACCAAAGAGCACACTTCAACATACATGGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp ATGCCAAGGCTTTCCAGAATGCCGGACTGCTTGATTCACATTTGTGAGCTCCAATCGAGGCCAGCTTGTTaGAGGATGTCAATGGCAGTG +
Preference number: 5 (lower is better)
Translates to: MPRLSRMPDCLIHICELQSRPAC*RMSMAV
Trigger: CACTGCCATTGACATCCTCAAACAAGCTGGCCTCGA...TTGGAGCTCACAAATGTGAATCAAGCAGTCCGGCATTCTGGAAAGCCTTGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp ATGCCAAGGCTTTCCAGAATGCCGGACTGCTTGATTCACATTTGTGAGCTCCAAGAGCTGACTTCCAGTTaGTCCCCTTGGAGAGACTTC +
Preference number: 5 (lower is better)
Translates to: MPRLSRMPDCLIHICELQELTSS*SPWRDF
Trigger: GAAGTCTCTCCAAGGGGACAAACTGGAAGTCAGCTC...TTGGAGCTCACAAATGTGAATCAAGCAGTCCGGCATTCTGGAAAGCCTTGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS GCA 90 bp ACGGCGGCCCGAAGTGTCTCAAAGGTGTCCTCGATTTCAATGATCTaGTGGATGTTGTTGGTGATGGTGGAAATGACCTTGTCAATGAGA +
Preference number: 5 (lower is better)
Translates to: TAARSVSKVSSISMI*WMLLVMVEMTLSMR
Trigger: TCTCATTGACAAGGTCATTTCCACCATCACCAACAACATCCAGCAGATCATTGAAATCGAGGACACCTTTGAGACACTTCGGGCCGCCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS CCA 90 bp GCCAACTGTTCTTTGACCATGTGGTTCAGAAGCAAAGTCTTCATCTaGGCGTCGATGCGAGGGACACCATCTTTGAACACAGAATTCAGG +
Preference number: 5 (lower is better)
Translates to: ANCSLTMWFRSKVFI*ASMRGTPSLNTEFR
Trigger: CCTGAATTCTGTGTTCAAAGATGGTGTCCCTCGCATCGACGCCCAGATGAAGACTTTGCTTCTGAACCACATGGTCAAAGAACAGTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS CCA 90 bp GTTCCTTGGCATTTGCCAAGAGTTTGTTCAGTTCTTCTGGAGGCATaGCTTGGAACGCTTCATTGGTGGGAGCAAAAACAGTGTAGACCC +
Preference number: 5 (lower is better)
Translates to: VPWHLPRVCSVLLEA*LGTLHWWEQKQCRP
Trigger: GGGTCTACACTGTTTTTGCTCCCACCAATGAAGCGTTCCAAGCCATGCCTCCAGAAGAACTGAACAAACTCTTGGCAAATGCCAAGGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp CAAGAGCTTTACAGAACCATGCCAAGGCTTTCCAGAATGCCGGACTGCTTGATTAGCTCAAGCAGTGTCTaGGCTGAATCTGGGATAAGC +
Preference number: 5 (lower is better)
Translates to: QELYRTMPRLSRMPDCLISSSSV*AESGIS
Trigger: GCTTATCCCAGATTCAGCCAAGACACTGCTTGAGCT...AATCAAGCAGTCCGGCATTCTGGAAAGCCTTGGCATGGTTCTGTAAAGCTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp TTCTACCTGGGCAGGGCCAATATAGAAGCATCCAAACCATGTGTGGACACAAGAAGCTCAAGCAGTGTCTaGGCTGAATCTGGGATAAGC +
Preference number: 5 (lower is better)
Translates to: FYLGRANIEASKPCVDTRSSSSV*AESGIS
Trigger: GCTTATCCCAGATTCAGCCAAGACACTGCTTGAGCT...TCTTGTGTCCACACATGGTTTGGATGCTTCTATATTGGCCCTGCCCAGGTAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp TCTACATGTTCTTCTTACCCTTTCTACCTGGGCAGGGCCAATATAGAAGCATCCCGAGGGACACCATCTTaGAACACAGAATTCAGGGGG +
Preference number: 5 (lower is better)
Translates to: STCSSYPFYLGRANIEASRGTPS*NTEFRG
Trigger: CCCCCTGAATTCTGTGTTCAAAGATGGTGTCCCTCG...GGATGCTTCTATATTGGCCCTGCCCAGGTAGAAAGGGTAAGAAGAACATGTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp CTACCTGGGCAGGGCCAATATAGAAGCATCCAAACCATGTGTGGACACAAGACACCAGAGTACAGATACTaGGAGGCCAACTGTTCTTTG +
Preference number: 5 (lower is better)
Translates to: LPGQGQYRSIQTMCGHKTPEYRY*EANCSL
Trigger: CAAAGAACAGTTGGCCTCCAAGTATCTGTACTCTGG...TGTCTTGTGTCCACACATGGTTTGGATGCTTCTATATTGGCCCTGCCCAGGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp CTGGGCAGGGCCAATATAGAAGCATCCAAACCATGTGTGGACACAAGACATACTGCTTGGAACGCTTCATaGGTGGGAGCAAAAACAGTG +
Preference number: 5 (lower is better)
Translates to: LGRANIEASKPCVDTRHTAWNAS*VGAKTV
Trigger: CACTGTTTTTGCTCCCACCAATGAAGCGTTCCAAGC...AGTATGTCTTGTGTCCACACATGGTTTGGATGCTTCTATATTGGCCCTGCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp GGGTCCCTCACACTCAGGGAATCTGGATTCTACATGTTCTTCTTACCCTTTCTAGAGCTGACTTCCAGTTaGTCCCCTTGGAGAGACTTC +
Preference number: 5 (lower is better)
Translates to: GSLTLRESGFYMFFLPFLELTSS*SPWRDF
Trigger: GAAGTCTCTCCAAGGGGACAAACTGGAAGTCAGCTC...TAGAAAGGGTAAGAAGAACATGTAGAATCCAGATTCCCTGAGTGTGAGGGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp GCAGAACCTATCCCCAGCACGCAGCTAGCACACAGGTGTTTGTTTCTTTGGTTTGTGAAGTATTTCTTGTaGGTGCCAATGACCTTCTGC +
Preference number: 5 (lower is better)
Translates to: AEPIPSTQLAHRCLFLWFVKYFL*VPMTFC
Trigger: GCAGAAGGTCATTGGCACCAACAAGAAATACTTCAC...AAACCAAAGAAACAAACACCTGTGTGCTAGCTGCGTGCTGGGGATAGGTTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp GGCCAATATAGAAGCATCCAAACCATGTGTGGACACAAGACATACTTGACAGAAAGTTCGATGTTGACGTaGCTCACCAGGGAGTCCAGC +
Preference number: 5 (lower is better)
Translates to: GQYRSIQTMCGHKTYLTESSMLT*LTRESS
Trigger: GCTGGACTCCCTGGTGAGCAACGTCAACATCGAACT...TTCTGTCAAGTATGTCTTGTGTCCACACATGGTTTGGATGCTTCTATATTGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp GGCCAATATAGAAGCATCCAAACCATGTGTGGACACAAGACATACTTGACAGAAGCCAGGATGTCTTTGTaGGAGATGACAGCCTTCCCG +
Preference number: 5 (lower is better)
Translates to: GQYRSIQTMCGHKTYLTEARMSL*EMTAFP
Trigger: CGGGAAGGCTGTCATCTCCAACAAAGACATCCTGGC...TTCTGTCAAGTATGTCTTGTGTCCACACATGGTTTGGATGCTTCTATATTGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp TTATTACAAATGCACCATGGGTCCCTCACACTCAGGGAATCTGGATTCTACATGGTGGCCAGGATGTCTTaGTTGGAGATGACAGCCTTC +
Preference number: 5 (lower is better)
Translates to: LLQMHHGSLTLRESGFYMVARMS*LEMTAF
Trigger: GAAGGCTGTCATCTCCAACAAAGACATCCTGGCCAC...CATGTAGAATCCAGATTCCCTGAGTGTGAGGGACCCATGGTGCATTTGTAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp ATTCAATGGTCTCTTTGGCAAACTGAGAGAAACTGGCGGGAAGCTGCTGCAGGGTTGACACTCACTACATaGTTTTTCGAGCTGACTTCC +
Preference number: 5 (lower is better)
Translates to: IQWSLWQTERNWREAAAGLTLTT*FFELTS
Trigger: GGAAGTCAGCTCGAAAAACAATGTAGTGAGTGTCAA...CCCTGCAGCAGCTTCCCGCCAGTTTCTCTCAGTTTGCCAAAGAGACCATTGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS TCA 90 bp AGCAGTGTCTTGGCTGAATCTGGGATAAGCAGCTCATCAATGAAATaGATGACACCGTTGGTGGCCAGGATGTCTTTGTTGGAGATGACA +
Preference number: 5 (lower is better)
Translates to: SSVLAESGISSSSMK*MTPLVARMSLLEMT
Trigger: TGTCATCTCCAACAAAGACATCCTGGCCACCAACGGTGTCATTCATTTCATTGATGAGCTGCTTATCCCAGATTCAGCCAAGACACTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS GCA 90 bp TTTCAATGCAGAGGCTATTTCGATAAACAAAGACTCGCAGCTTTTTaGCACCCAGCGTGTCCAGTGTCTGTCCAGAGTACAGATACTTGG +
Preference number: 5 (lower is better)
Translates to: FQCRGYFDKQRLAAF*HPACPVSVQSTDTW
Trigger: CCAAGTATCTGTACTCTGGACAGACACTGGACACGCTGGGTGGCAAAAAGCTGCGAGTCTTTGTTTATCGAAATAGCCTCTGCATTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS GCA 90 bp ATCACCAATGTGGTACTTCAGGATGTTGGTAAGTTCCTTGGCATTTaGCAAGAGTTTGTTCAGTTCTTCTGGAGGCATGGCTTGGAACGC +
Preference number: 5 (lower is better)
Translates to: ITNVVLQDVGKFLGI*QEFVQFFWRHGLER
Trigger: GCGTTCCAAGCCATGCCTCCAGAAGAACTGAACAAACTCTTGGCAAATGCCAAGGAACTTACCAACATCCTGAAGTACCACATTGGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS CCA 90 bp GTTGGTAAGTTCCTTGGCATTTGCCAAGAGTTTGTTCAGTTCTTCTaGAGGCATGGCTTGGAACGCTTCATTGGTGGGAGCAAAAACAGT +
Preference number: 5 (lower is better)
Translates to: VGKFLGICQEFVQFF*RHGLERFIGGSKNS
Trigger: ACTGTTTTTGCTCCCACCAATGAAGCGTTCCAAGCCATGCCTCCAGAAGAACTGAACAAACTCTTGGCAAATGCCAAGGAACTTACCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp CTGGGCAGGGCCAATATAGAAGCATCCAAACCATGTGTGGACACAAGACATACTGTGAAGTATTTCTTGTaGGTGCCAATGACCTTCTGC +
Preference number: 5 (lower is better)
Translates to: LGRANIEASKPCVDTRHTVKYFL*VPMTFC
Trigger: GCAGAAGGTCATTGGCACCAACAAGAAATACTTCAC...AGTATGTCTTGTGTCCACACATGGTTTGGATGCTTCTATATTGGCCCTGCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp CTACCTGGGCAGGGCCAATATAGAAGCATCCAAACCATGTGTGGACACAAGACATACCACTGCTTGCAGTaGGTGAAGTATTTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: LPGQGQYRSIQTMCGHKTYHCLQ*VKYFLL
Trigger: CAACAAGAAATACTTCACCAACTGCAAGCAGTGGTA...TGTCTTGTGTCCACACATGGTTTGGATGCTTCTATATTGGCCCTGCCCAGGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp GGGTCCCTCACACTCAGGGAATCTGGATTCTACATGTTCTTCTTACCCTTTCTACCAGAGTACAGATACTaGGAGGCCAACTGTTCTTTG +
Preference number: 5 (lower is better)
Translates to: GSLTLRESGFYMFFLPFLPEYRY*EANCSL
Trigger: CAAAGAACAGTTGGCCTCCAAGTATCTGTACTCTGG...TAGAAAGGGTAAGAAGAACATGTAGAATCCAGATTCCCTGAGTGTGAGGGACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp TTATTACAAATGCACCATGGGTCCCTCACACTCAGGGAATCTGGATTCTACATGGCTTGGAACGCTTCATaGGTGGGAGCAAAAACAGTG +
Preference number: 5 (lower is better)
Translates to: LLQMHHGSLTLRESGFYMAWNAS*VGAKTV
Trigger: CACTGTTTTTGCTCCCACCAATGAAGCGTTCCAAGC...CATGTAGAATCCAGATTCCCTGAGTGTGAGGGACCCATGGTGCATTTGTAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp TTACAGAACCATGCCAAGGCTTTCCAGAATGCCGGACTGCTTGATTCACATTTGATGATCTGCTGGATGTaGTTGGTGATGGTGGAAATG +
Preference number: 5 (lower is better)
Translates to: LQNHAKAFQNAGLLDSHLMICWM*LVMVEM
Trigger: CATTTCCACCATCACCAACAACATCCAGCAGATCAT...CAAATGTGAATCAAGCAGTCCGGCATTCTGGAAAGCCTTGGCATGGTTCTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp TGCAGCCCATGTATGTTGAAGTGTGCTCTTTGGTTTCAAAAACATTCAATGGTCTCGAGGCCAGCTTGTTaGAGGATGTCAATGGCAGTG +
Preference number: 5 (lower is better)
Translates to: CSPCMLKCALWFQKHSMVSRPAC*RMSMAV
Trigger: CACTGCCATTGACATCCTCAAACAAGCTGGCCTCGA...GACCATTGAATGTTTTTGAAACCAAAGAGCACACTTCAACATACATGGGCTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp TCTGGATTCTACATGTTCTTCTTACCCTTTCTACCTGGGCAGGGCCAATATAGAAGCATGCTAAAACGATaGTCTCCCTTCAGGACATCC +
Preference number: 5 (lower is better)
Translates to: SGFYMFFLPFLPGQGQYRSMLKR*SPFRTS
Trigger: GGATGTCCTGAAGGGAGACAATCGTTTTAGCATGCT...TCTATATTGGCCCTGCCCAGGTAGAAAGGGTAAGAAGAACATGTAGAATCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp TACCTGGGCAGGGCCAATATAGAAGCATCCAAACCATGTGTGGACACAAGACATATGTTGGTAAGTTCCTaGGCATTTGCCAAGAGTTTG +
Preference number: 5 (lower is better)
Translates to: YLGRANIEASKPCVDTRHMLVSS*AFAKSL
Trigger: CAAACTCTTGGCAAATGCCAAGGAACTTACCAACAT...ATGTCTTGTGTCCACACATGGTTTGGATGCTTCTATATTGGCCCTGCCCAGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp TACCTGGGCAGGGCCAATATAGAAGCATCCAAACCATGTGTGGACACAAGACATTGGTACTTCAGGATGTaGGTAAGTTCCTTGGCATTT +
Preference number: 5 (lower is better)
Translates to: YLGRANIEASKPCVDTRHWYFRM*VSSLAF
Trigger: AAATGCCAAGGAACTTACCAACATCCTGAAGTACCA...ATGTCTTGTGTCCACACATGGTTTGGATGCTTCTATATTGGCCCTGCCCAGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp CAAGAGCTTTACAGAACCATGCCAAGGCTTTCCAGAATGCCGGACTGCTTGATTTTGACACTCACTACATaGTTTTTCGAGCTGACTTCC +
Preference number: 5 (lower is better)
Translates to: QELYRTMPRLSRMPDCLILTLTT*FFELTS
Trigger: GGAAGTCAGCTCGAAAAACAATGTAGTGAGTGTCAA...AATCAAGCAGTCCGGCATTCTGGAAAGCCTTGGCATGGTTCTGTAAAGCTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp AGCTATGACTGCCAGATCTGTATATTCAATGGGTTAACAACCACGTTTGGAGGGCGTTCTTGTGGTCGGTaGGCTAGAGAGAAAGGAAAA +
Preference number: 5 (lower is better)
Translates to: SYDCQICIFNGLTTTFGGRSCGR*AREKGK
Trigger: TTTTCCTTTCTCTCTAGCCAACCGACCACAAGAACG...CCCTCCAAACGTGGTTGTTAACCCATTGAATATACAGATCTGGCAGTCATAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp TTACAGAACCATGCCAAGGCTTTCCAGAATGCCGGACTGCTTGATTCACATTTGTACCACTGCTTGCAGTaGGTGAAGTATTTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: LQNHAKAFQNAGLLDSHLYHCLQ*VKYFLL
Trigger: CAACAAGAAATACTTCACCAACTGCAAGCAGTGGTA...CAAATGTGAATCAAGCAGTCCGGCATTCTGGAAAGCCTTGGCATGGTTCTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp GGCCAATATAGAAGCATCCAAACCATGTGTGGACACAAGACATACTTGACAGAAAGCATGCTAAAACGATaGTCTCCCTTCAGGACATCC +
Preference number: 5 (lower is better)
Translates to: GQYRSIQTMCGHKTYLTESMLKR*SPFRTS
Trigger: GGATGTCCTGAAGGGAGACAATCGTTTTAGCATGCT...TTCTGTCAAGTATGTCTTGTGTCCACACATGGTTTGGATGCTTCTATATTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp GTCCCTCACACTCAGGGAATCTGGATTCTACATGTTCTTCTTACCCTTTCTACCGCAACAGGCTCCTTATaGACACTCACTACATTGTTT +
Preference number: 5 (lower is better)
Translates to: VPHTQGIWILHVLLTLSTATGSL*TLTTLF
Trigger: AAACAATGTAGTGAGTGTCAATAAGGAGCCTGTTGC...GGTAGAAAGGGTAAGAAGAACATGTAGAATCCAGATTCCCTGAGTGTGAGGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp CAGCCCATGTATGTTGAAGTGTGCTCTTTGGTTTCAAAAACATTCAATGGTCTCCTCTGGTACCACTGCTaGCAGTTGGTGAAGTATTTC +
Preference number: 5 (lower is better)
Translates to: QPMYVEVCSLVSKTFNGLLWYHC*QLVKYF
Trigger: GAAATACTTCACCAACTGCAAGCAGTGGTACCAGAG...GAGACCATTGAATGTTTTTGAAACCAAAGAGCACACTTCAACATACATGGGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp GGCCAATATAGAAGCATCCAAACCATGTGTGGACACAAGACATACTTGACAGAAATGATCTGCTGGATGTaGTTGGTGATGGTGGAAATG +
Preference number: 5 (lower is better)
Translates to: GQYRSIQTMCGHKTYLTEMICWM*LVMVEM
Trigger: CATTTCCACCATCACCAACAACATCCAGCAGATCAT...TTCTGTCAAGTATGTCTTGTGTCCACACATGGTTTGGATGCTTCTATATTGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp CAGCCCATGTATGTTGAAGTGTGCTCTTTGGTTTCAAAAACATTCAATGGTCTCGCATTTGCCAAGAGTTaGTTCAGTTCTTCTGGAGGC +
Preference number: 5 (lower is better)
Translates to: QPMYVEVCSLVSKTFNGLAFAKS*FSSSGG
Trigger: GCCTCCAGAAGAACTGAACAAACTCTTGGCAAATGC...GAGACCATTGAATGTTTTTGAAACCAAAGAGCACACTTCAACATACATGGGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp TGCAGCCCATGTATGTTGAAGTGTGCTCTTTGGTTTCAAAAACATTCAATGGTCGCATTTGCCAAGAGTTaGTTCAGTTCTTCTGGAGGC +
Preference number: 5 (lower is better)
Translates to: CSPCMLKCALWFQKHSMVAFAKS*FSSSGG
Trigger: GCCTCCAGAAGAACTGAACAAACTCTTGGCAAATGC...GACCATTGAATGTTTTTGAAACCAAAGAGCACACTTCAACATACATGGGCTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp AGCTATGACTGCCAGATCTGTATATTCAATGGGTTAACAACCACGTTTGGAGGGATGTTGGTAAGTTCCTaGGCATTTGCCAAGAGTTTG +
Preference number: 5 (lower is better)
Translates to: SYDCQICIFNGLTTTFGGMLVSS*AFAKSL
Trigger: CAAACTCTTGGCAAATGCCAAGGAACTTACCAACAT...CCCTCCAAACGTGGTTGTTAACCCATTGAATATACAGATCTGGCAGTCATAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS-3UTR CAA 90 bp CAACTCATAGCTTATAGTGATGCCGTTTCTCCAGCGGTACAAGAGCTTTACAGATGGTACTTCAGGATGTaGGTAAGTTCCTTGGCATTT +
Preference number: 5 (lower is better)
Translates to: QLIAYSDAVSPAVQELYRWYFRM*VSSLAF
Trigger: AAATGCCAAGGAACTTACCAACATCCTGAAGTACCA...TCTGTAAAGCTCTTGTACCGCTGGAGAAACGGCATCACTATAAGCTATGAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS TCA 72 bp CCGGAGCCGGCTATGCTGCAGCACCAGCTGGTAGGGTaGCTTGGCGGGACCTGCAAGGGTCCCAGCGGGGCC +
Preference number: 6 (lower is better)
Translates to: PEPAMLQHQLVG*LGGTCKGPSGA
Trigger: GGCCCCGCTGGGACCCTTGCAGGTCCCGCCAAGTCACCCTACCAGCTGGTGCTGCAGCATAGCCGGCTCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS GCA 72 bp GGGACCTGCAAGGGTCCCAGCGGGGCCCACAGACAGTaGCAGAGCGAGGGTCAGCAGTCGCATGAGGAGCGC +
Preference number: 6 (lower is better)
Translates to: GTCKGPSGAHRQ*QSEGQQSHEER
Trigger: GCGCTCCTCATGCGACTGCTGACCCTCGCTCTGGCACTGTCTGTGGGCCCCGCTGGGACCCTTGCAGGTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS CCA 72 bp GCCGGCTATGCTGCAGCACCAGCTGGTAGGGTGACTTaGCGGGACCTGCAAGGGTCCCAGCGGGGCCCACAG +
Preference number: 6 (lower is better)
Translates to: AGYAAAPAGRVT*RDLQGSQRGPQ
Trigger: CTGTGGGCCCCGCTGGGACCCTTGCAGGTCCCGCCAAGTCACCCTACCAGCTGGTGCTGCAGCATAGCCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS CAA 90 bp GTTGGGGCCAAGAGTGTGAACTGGCCGTCGCCCTCCAGCACGGTATaGAGTCCTGATGCAGCCACGGCGGCCCGAAGTGTCTCAAAGGTG +
Preference number: 6 (lower is better)
Translates to: VGAKSVNWPSPSSTV*SPDAATAARSVSKV
Trigger: CACCTTTGAGACACTTCGGGCCGCCGTGGCTGCATCAGGACTCAATACCGTGCTGGAGGGCGACGGCCAGTTCACACTCTTGGCCCCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS CAA 72 bp AAGAGTGTGAACTGGCCGTCGCCCTCCAGCACGGTATaGAGTCCTGATGCAGCCACGGCGGCCCGAAGTGTC +
Preference number: 6 (lower is better)
Translates to: KSVNWPSPSSTV*SPDAATAARSV
Trigger: GACACTTCGGGCCGCCGTGGCTGCATCAGGACTCAATACCGTGCTGGAGGGCGACGGCCAGTTCACACTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS CAA 72 bp TCCAGCACTTCCGCAGGCAAGGAAGACCAGGCCTCATaGCTAGGAGCAAAGATGGTGAAGCTTCCGGGTCCC +
Preference number: 6 (lower is better)
Translates to: SSTSAGKEDQAS*LGAKMVKLPGP
Trigger: GGGACCCGGAAGCTTCACCATCTTTGCTCCTAGCAATGAGGCCTGGTCTTCCTTGCCTGCGGAAGTGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS CAA 72 bp GTGGAAATGACCTTGTCAATGAGATGCACCACGCCGTaGGTCGCATGGTGGTCAGCCTTCAGCAGCCGGGCA +
Preference number: 6 (lower is better)
Translates to: VEMTLSMRCTTP*VAWWSAFSSRA
Trigger: TGCCCGGCTGCTGAAGGCTGACCACCATGCGACCAACGGCGTGGTGCATCTCATTGACAAGGTCATTTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS GCA 72 bp TTCCGGGTCCCTCCATCTCAGGCCTCAGCTTTTCTGTaGGGTCTGTATACAGCTGTGTGGTGGTCGATCCCA +
Preference number: 6 (lower is better)
Translates to: FRVPPSQASAFL*GLYTAVWWSIP
Trigger: TGGGATCGACCACCACACAGCTGTATACAGACCGCACAGAAAAGCTGAGGCCTGAGATGGAGGGACCCGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS CCA 72 bp ACCTTGTCAATGAGATGCACCACGCCGTTGGTCGCATaGTGGTCAGCCTTCAGCAGCCGGGCACAGTTAACA +
Preference number: 6 (lower is better)
Translates to: TLSMRCTTPLVA*WSAFSSRAQLT
Trigger: TGTTAACTGTGCCCGGCTGCTGAAGGCTGACCACCATGCGACCAACGGCGTGGTGCATCTCATTGACAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS CCA 72 bp TGCCAGCTCATCTCCTCGTTCTTGTGGTCGGTTGGCTaGCGGCTGCAGAACAGTGTTGATGGCATAGACCAC +
Preference number: 6 (lower is better)
Translates to: CQLISSFLWSVG*RLQNSVDGIDH
Trigger: GTGGTCTATGCCATCAACACTGTTCTGCAGCCGCCAGCCAACCGACCACAAGAACGAGGAGATGAGCTGGCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045173.10
CDS CCA 72 bp AAGGGCAGAGTCTGCCAGCTCATCTCCTCGTTCTTGTaGTCGGTTGGCTGGCGGCTGCAGAACAGTGTTGAT +
Preference number: 6 (lower is better)
Translates to: KGRVCQLISSFL*SVGWRLQNSVD
Trigger: ATCAACACTGTTCTGCAGCCGCCAGCCAACCGACCACAAGAACGAGGAGATGAGCTGGCAGACTCTGCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045173.10
CDS CAA 72 bp TTCAAGGGCAGAGTCTGCCAGCTCATCTCCTCGTTCTaGTGGTCGGTTGGCTGGCGGCTGCAGAACAGTGTT +
Preference number: 6 (lower is better)
Translates to: FKGRVCQLISSF*WSVGWRLQNSV
Trigger: AACACTGTTCTGCAGCCGCCAGCCAACCGACCACAAGAACGAGGAGATGAGCTGGCAGACTCTGCCCTTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045173.10
CDS CAA 90 bp AGTCGCACAGACCTCTGGGCAGCCCTGGAATACGCTGACGCCTGTTaGAAGATTTCAAGGGCAGAGTCTGCCAGCTCATCTCCTCGTTCT +
Preference number: 6 (lower is better)
Translates to: SRTDLWAALEYADAC*KISRAESASSSPRS
Trigger: AGAACGAGGAGATGAGCTGGCAGACTCTGCCCTTGAAATCTTCAAACAGGCGTCAGCGTATTCCAGGGCTGCCCAGAGGTCTGTGCGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045173.10
CDS CCA 72 bp TTGTCAATGAGATGCACCACGCCGTTGGTCGCATGGTaGTCAGCCTTCAGCAGCCGGGCACAGTTAACAGTT +
Preference number: 6 (lower is better)
Translates to: LSMRCTTPLVAW*SAFSSRAQLTV
Trigger: AACTGTTAACTGTGCCCGGCTGCTGAAGGCTGACCACCATGCGACCAACGGCGTGGTGCATCTCATTGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS CCA 72 bp CCTTCCCGGTTGAGGATCTCCATGAGTCCTGCAGACTaGATGGCGGCCACCAGCATGCTAAAACGATTGTCT +
Preference number: 6 (lower is better)
Translates to: PSRLRISMSPAD*MAATSMLKRLS
Trigger: AGACAATCGTTTTAGCATGCTGGTGGCCGCCATCCAGTCTGCAGGACTCATGGAGATCCTCAACCGGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS CAA 72 bp GACCTCTGGGCAGCCCTGGAATACGCTGACGCCTGTTaGAAGATTTCAAGGGCAGAGTCTGCCAGCTCATCT +
Preference number: 6 (lower is better)
Translates to: DLWAALEYADAC*KISRAESASSS
Trigger: AGATGAGCTGGCAGACTCTGCCCTTGAAATCTTCAAACAGGCGTCAGCGTATTCCAGGGCTGCCCAGAGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045173.10
CDS CAA 90 bp TTGGTGATGGTGGAAATGACCTTGTCAATGAGATGCACCACGCCGTaGGTCGCATGGTGGTCAGCCTTCAGCAGCCGGGCACAGTTAACA +
Preference number: 6 (lower is better)
Translates to: LVMVEMTLSMRCTTP*VAWWSAFSSRAQLT
Trigger: TGTTAACTGTGCCCGGCTGCTGAAGGCTGACCACCATGCGACCAACGGCGTGGTGCATCTCATTGACAAGGTCATTTCCACCATCACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS GCA 72 bp TTGTTGGTGATGGTGGAAATGACCTTGTCAATGAGATaGACCACGCCGTTGGTCGCATGGTGGTCAGCCTTC +
Preference number: 6 (lower is better)
Translates to: LLVMVEMTLSMR*TTPLVAWWSAF
Trigger: GAAGGCTGACCACCATGCGACCAACGGCGTGGTGCATCTCATTGACAAGGTCATTTCCACCATCACCAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS CCA 72 bp ATTGTCTCCCTTCAGGACATCCATAACTGTCCCCATTaGGGGTGTCAACATCCGGTCCATGGTGAACAGGGT +
Preference number: 6 (lower is better)
Translates to: IVSLQDIHNCPH*GCQHPVHGEQG
Trigger: ACCCTGTTCACCATGGACCGGATGTTGACACCCCCAATGGGGACAGTTATGGATGTCCTGAAGGGAGACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS CCA 72 bp TCAGTTCTTCTGGAGGCATGGCTTGGAACGCTTCATTaGTGGGAGCAAAAACAGTGTAGACCCCTTCCCGGT +
Preference number: 6 (lower is better)
Translates to: SVLLEAWLGTLH*WEQKQCRPLPG
Trigger: ACCGGGAAGGGGTCTACACTGTTTTTGCTCCCACCAATGAAGCGTTCCAAGCCATGCCTCCAGAAGAACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS CCA 72 bp TGTGGTCGGTTGGCTAGAGAGAAAGGAAAAACAGCCTaGCGGCTGCAGAACAGTGTTGATGGCATAGACCAC +
Preference number: 6 (lower is better)
Translates to: CGRLAREKGKTA*RLQNSVDGIDH
Trigger: GTGGTCTATGCCATCAACACTGTTCTGCAGCCGCCAGGCTGTTTTTCCTTTCTCTCTAGCCAACCGACCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000225600.2
CDS CAA 72 bp ACACTCACTACATTGTTTTTCGAGCTGACTTCCAGTTaGTCCCCTTGGAGAGACTTCAGCCGCACCAGGGCC +
Preference number: 6 (lower is better)
Translates to: TLTTLFFELTSS*SPWRDFSRTRA
Trigger: GGCCCTGGTGCGGCTGAAGTCTCTCCAAGGGGACAAACTGGAAGTCAGCTCGAAAAACAATGTAGTGAGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS CAA 90 bp TTTGAAGATTTCAAGGGCAGAGTCTGCCAGCTCATCTCCTCGTTCTaGTGGTCGGTTGGCTGGCGGCTGCAGAACAGTGTTGATGGCATA +
Preference number: 6 (lower is better)
Translates to: FEDFKGRVCQLISSF*WSVGWRLQNSVDGI
Trigger: TATGCCATCAACACTGTTCTGCAGCCGCCAGCCAACCGACCACAAGAACGAGGAGATGAGCTGGCAGACTCTGCCCTTGAAATCTTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045173.10
CDS CAA 90 bp GAAGGTCAACTGTTCTTTCCCAGAGAGATGAGTATCGAGGCCAGCTaGTTTGAGGATGTCAATGGCAGTGGAGACGTCAGATTCCCCAGC +
Preference number: 6 (lower is better)
Translates to: EGQLFFPREMSIEAS*FEDVNGSGDVRFPS
Trigger: GCTGGGGAATCTGACGTCTCCACTGCCATTGACATCCTCAAACAAGCTGGCCTCGATACTCATCTCTCTGGGAAAGAACAGTTGACCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS TCA 72 bp CTTTCCCAGAGAGATGAGTATCGAGGCCAGCTTGTTTaGGGATGTCAATGGCAGTGGAGACGTCAGATTCCC +
Preference number: 6 (lower is better)
Translates to: LSQRDEYRGQLV*GCQWQWRRQIP
Trigger: GGGAATCTGACGTCTCCACTGCCATTGACATCCTCAAACAAGCTGGCCTCGATACTCATCTCTCTGGGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS TCA 72 bp GGGGCCAGGAAGGTCAACTGTTCTTTCCCAGAGAGATaGGTATCGAGGCCAGCTTGTTTGAGGATGTCAATG +
Preference number: 6 (lower is better)
Translates to: GARKVNCSFPER*VSRPACLRMSM
Trigger: CATTGACATCCTCAAACAAGCTGGCCTCGATACTCATCTCTCTGGGAAAGAACAGTTGACCTTCCTGGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS CCA 72 bp TATACAGCTGTGTGGTGGTCGATCCCACAACTCCCATaGTCTCATACAGATTTGAGAGCGGAAGAGCTGCTG +
Preference number: 6 (lower is better)
Translates to: YTAVWWSIPQLP*SHTDLRAEELL
Trigger: CAGCAGCTCTTCCGCTCTCAAATCTGTATGAGACCATGGGAGTTGTGGGATCGACCACCACACAGCTGTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS CCA 72 bp CCATGGACATTCCAGCTACAATGGCCTCAGCACACATaGCTGACTTCAGGATGTGGTTGTTTAGCAGGTCTC +
Preference number: 6 (lower is better)
Translates to: PWTFQLQWPQHT*LTSGCGCLAGL
Trigger: GAGACCTGCTAAACAACCACATCCTGAAGTCAGCCATGTGTGCTGAGGCCATTGTAGCTGGAATGTCCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS CAA 72 bp ATCTGCTGGATGTTGTTGGTGATGGTGGAAATGACCTaGTCAATGAGATGCACCACGCCGTTGGTCGCATGG +
Preference number: 6 (lower is better)
Translates to: ICWMLLVMVEMT*SMRCTTPLVAW
Trigger: CCATGCGACCAACGGCGTGGTGCATCTCATTGACAAGGTCATTTCCACCATCACCAACAACATCCAGCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS CAA 90 bp ATTTCAATGATCTGCTGGATGTTGTTGGTGATGGTGGAAATGACCTaGTCAATGAGATGCACCACGCCGTTGGTCGCATGGTGGTCAGCC +
Preference number: 6 (lower is better)
Translates to: ISMICWMLLVMVEMT*SMRCTTPLVAWWSA
Trigger: GGCTGACCACCATGCGACCAACGGCGTGGTGCATCTCATTGACAAGGTCATTTCCACCATCACCAACAACATCCAGCAGATCATTGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS CCA 72 bp TTCCTTGGCATTTGCCAAGAGTTTGTTCAGTTCTTCTaGAGGCATGGCTTGGAACGCTTCATTGGTGGGAGC +
Preference number: 6 (lower is better)
Translates to: FLGICQEFVQFF*RHGLERFIGGS
Trigger: GCTCCCACCAATGAAGCGTTCCAAGCCATGCCTCCAGAAGAACTGAACAAACTCTTGGCAAATGCCAAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS CAA 72 bp GAGACGTCAGATTCCCCAGCCAGCTCAAGCAGTGTCTaGGCTGAATCTGGGATAAGCAGCTCATCAATGAAA +
Preference number: 6 (lower is better)
Translates to: ETSDSPASSSSV*AESGISSSSMK
Trigger: TTTCATTGATGAGCTGCTTATCCCAGATTCAGCCAAGACACTGCTTGAGCTGGCTGGGGAATCTGACGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS CAA 72 bp CTGTTCTTTCCCAGAGAGATGAGTATCGAGGCCAGCTaGTTTGAGGATGTCAATGGCAGTGGAGACGTCAGA +
Preference number: 6 (lower is better)
Translates to: LFFPREMSIEAS*FEDVNGSGDVR
Trigger: TCTGACGTCTCCACTGCCATTGACATCCTCAAACAAGCTGGCCTCGATACTCATCTCTCTGGGAAAGAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS CAA 90 bp TCCAGTGTCTGTCCAGAGTACAGATACTTGGAGGCCAACTGTTCTTaGACCATGTGGTTCAGAAGCAAAGTCTTCATCTGGGCGTCGATG +
Preference number: 6 (lower is better)
Translates to: SSVCPEYRYLEANCS*TMWFRSKVFIWASM
Trigger: CATCGACGCCCAGATGAAGACTTTGCTTCTGAACCACATGGTCAAAGAACAGTTGGCCTCCAAGTATCTGTACTCTGGACAGACACTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS CAA 90 bp CTTGGCATTTGCCAAGAGTTTGTTCAGTTCTTCTGGAGGCATGGCTaGGAACGCTTCATTGGTGGGAGCAAAAACAGTGTAGACCCCTTC +
Preference number: 6 (lower is better)
Translates to: LGICQEFVQFFWRHG*ERFIGGSKNSVDPF
Trigger: GAAGGGGTCTACACTGTTTTTGCTCCCACCAATGAAGCGTTCCAAGCCATGCCTCCAGAAGAACTGAACAAACTCTTGGCAAATGCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS GCA 72 bp AGAGGCTATTTCGATAAACAAAGACTCGCAGCTTTTTaGCACCCAGCGTGTCCAGTGTCTGTCCAGAGTACA +
Preference number: 6 (lower is better)
Translates to: RGYFDKQRLAAF*HPACPVSVQST
Trigger: TGTACTCTGGACAGACACTGGACACGCTGGGTGGCAAAAAGCTGCGAGTCTTTGTTTATCGAAATAGCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS GCA 72 bp GGGTCCCAAACCGTCCCCTCTTATCATGGGCAGCAATaGAGCTGTTTTCAATGCAGAGGCTATTTCGATAAA +
Preference number: 6 (lower is better)
Translates to: GSQTVPSYHGQQ*SCFQCRGYFDK
Trigger: TTTATCGAAATAGCCTCTGCATTGAAAACAGCTGCATTGCTGCCCATGATAAGAGGGGACGGTTTGGGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS CCA 72 bp TCTTTGACCATGTGGTTCAGAAGCAAAGTCTTCATCTaGGCGTCGATGCGAGGGACACCATCTTTGAACACA +
Preference number: 6 (lower is better)
Translates to: SLTMWFRSKVFI*ASMRGTPSLNT
Trigger: TGTGTTCAAAGATGGTGTCCCTCGCATCGACGCCCAGATGAAGACTTTGCTTCTGAACCACATGGTCAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS CAA 72 bp GTGGCCATGATGTCGGTTTCGGCAACAGGCTCCTTATaGACACTCACTACATTGTTTTTCGAGCTGACTTCC +
Preference number: 6 (lower is better)
Translates to: VAMMSVSATGSL*TLTTLFFELTS
Trigger: GGAAGTCAGCTCGAAAAACAATGTAGTGAGTGTCAATAAGGAGCCTGTTGCCGAAACCGACATCATGGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS CAA 90 bp ACACCGTTTGTGGCCATGATGTCGGTTTCGGCAACAGGCTCCTTATaGACACTCACTACATTGTTTTTCGAGCTGACTTCCAGTTTGTCC +
Preference number: 6 (lower is better)
Translates to: TPFVAMMSVSATGSL*TLTTLFFELTSSLS
Trigger: GGACAAACTGGAAGTCAGCTCGAAAAACAATGTAGTGAGTGTCAATAAGGAGCCTGTTGCCGAAACCGACATCATGGCCACAAACGGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS CAA 90 bp CGAAGTGTCTCAAAGGTGTCCTCGATTTCAATGATCTGCTGGATGTaGTTGGTGATGGTGGAAATGACCTTGTCAATGAGATGCACCACG +
Preference number: 6 (lower is better)
Translates to: RSVSKVSSISMICWM*LVMVEMTLSMRCTT
Trigger: CGTGGTGCATCTCATTGACAAGGTCATTTCCACCATCACCAACAACATCCAGCAGATCATTGAAATCGAGGACACCTTTGAGACACTTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS CAA 90 bp TGGTACTTCAGGATGTTGGTAAGTTCCTTGGCATTTGCCAAGAGTTaGTTCAGTTCTTCTGGAGGCATGGCTTGGAACGCTTCATTGGTG +
Preference number: 6 (lower is better)
Translates to: WYFRMLVSSLAFAKS*FSSSGGMAWNASLV
Trigger: CACCAATGAAGCGTTCCAAGCCATGCCTCCAGAAGAACTGAACAAACTCTTGGCAAATGCCAAGGAACTTACCAACATCCTGAAGTACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS TCA 72 bp GTCAGATTCCCCAGCCAGCTCAAGCAGTGTCTTGGCTaGATCTGGGATAAGCAGCTCATCAATGAAATGAAT +
Preference number: 6 (lower is better)
Translates to: VRFPSQLKQCLG*IWDKQLINEMN
Trigger: ATTCATTTCATTGATGAGCTGCTTATCCCAGATTCAGCCAAGACACTGCTTGAGCTGGCTGGGGAATCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS CCA 72 bp CATTTGCCAAGAGTTTGTTCAGTTCTTCTGGAGGCATaGCTTGGAACGCTTCATTGGTGGGAGCAAAAACAG +
Preference number: 6 (lower is better)
Translates to: HLPRVCSVLLEA*LGTLHWWEQKQ
Trigger: CTGTTTTTGCTCCCACCAATGAAGCGTTCCAAGCCATGCCTCCAGAAGAACTGAACAAACTCTTGGCAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS CCA 72 bp CCGATGCCTCCGCTAACCAGGATTTCATCACCAATGTaGTACTTCAGGATGTTGGTAAGTTCCTTGGCATTT +
Preference number: 6 (lower is better)
Translates to: PMPPLTRISSPM*YFRMLVSSLAF
Trigger: AAATGCCAAGGAACTTACCAACATCCTGAAGTACCACATTGGTGATGAAATCCTGGTTAGCGGAGGCATCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS CAA 72 bp TGCCAAGAGTTTGTTCAGTTCTTCTGGAGGCATGGCTaGGAACGCTTCATTGGTGGGAGCAAAAACAGTGTA +
Preference number: 6 (lower is better)
Translates to: CQEFVQFFWRHG*ERFIGGSKNSV
Trigger: TACACTGTTTTTGCTCCCACCAATGAAGCGTTCCAAGCCATGCCTCCAGAAGAACTGAACAAACTCTTGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS CAA 72 bp AGGATGTTGGTAAGTTCCTTGGCATTTGCCAAGAGTTaGTTCAGTTCTTCTGGAGGCATGGCTTGGAACGCT +
Preference number: 6 (lower is better)
Translates to: RMLVSSLAFAKS*FSSSGGMAWNA
Trigger: AGCGTTCCAAGCCATGCCTCCAGAAGAACTGAACAAACTCTTGGCAAATGCCAAGGAACTTACCAACATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS CAA 72 bp GTTTCGGCAACAGGCTCCTTATTGACACTCACTACATaGTTTTTCGAGCTGACTTCCAGTTTGTCCCCTTGG +
Preference number: 6 (lower is better)
Translates to: VSATGSLLTLTT*FFELTSSLSPW
Trigger: CCAAGGGGACAAACTGGAAGTCAGCTCGAAAAACAATGTAGTGAGTGTCAATAAGGAGCCTGTTGCCGAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS GCA 72 bp CGAAGTGTCTCAAAGGTGTCCTCGATTTCAATGATCTaGTGGATGTTGTTGGTGATGGTGGAAATGACCTTG +
Preference number: 6 (lower is better)
Translates to: RSVSKVSSISMI*WMLLVMVEMTL
Trigger: CAAGGTCATTTCCACCATCACCAACAACATCCAGCAGATCATTGAAATCGAGGACACCTTTGAGACACTTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS CAA 72 bp TGTCCAGAGTACAGATACTTGGAGGCCAACTGTTCTTaGACCATGTGGTTCAGAAGCAAAGTCTTCATCTGG +
Preference number: 6 (lower is better)
Translates to: CPEYRYLEANCS*TMWFRSKVFIW
Trigger: CCAGATGAAGACTTTGCTTCTGAACCACATGGTCAAAGAACAGTTGGCCTCCAAGTATCTGTACTCTGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS CAA 90 bp CCTCCGCTAACCAGGATTTCATCACCAATGTGGTACTTCAGGATGTaGGTAAGTTCCTTGGCATTTGCCAAGAGTTTGTTCAGTTCTTCT +
Preference number: 6 (lower is better)
Translates to: PPLTRISSPMWYFRM*VSSLAFAKSLFSSS
Trigger: AGAAGAACTGAACAAACTCTTGGCAAATGCCAAGGAACTTACCAACATCCTGAAGTACCACATTGGTGATGAAATCCTGGTTAGCGGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2
CDS CAA 72 bp ACCAGGATTTCATCACCAATGTGGTACTTCAGGATGTaGGTAAGTTCCTTGGCATTTGCCAAGAGTTTGTTC +
Preference number: 6 (lower is better)
Translates to: TRISSPMWYFRM*VSSLAFAKSLF
Trigger: GAACAAACTCTTGGCAAATGCCAAGGAACTTACCAACATCCTGAAGTACCACATTGGTGATGAAATCCTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045173.10
ENSMUST00000225600.2