Pregenerated sensors for TGFB3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021253Ensembl transcript IDs: ENSMUST00000003687.8
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATGGCGCCCCAGGCTATGTGGACTCTGAATCCGGAGAATACACCCTaGCCCGGAAGGTGTCTAGCCAAATATCCAAGGGGAAATGCGGCC | + |
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Preference number: 1 (lower is better) Translates to: MAPQAMWTLNPENTP*PGRCLAKYPRGNAA Trigger: GGCCGCATTTCCCCTTGGATATTTGGCTAGACACCTTCCGGGTCAGGGTGTATTCTCCGGATTCAGAGTCCACATAGCCTGGGGCGCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| 3UTR GCA 90 bp | CACTCACAATGTCCACTCGCTATCCGTTCTCTACCCCACCACCTCTaGCTGCACCACAGAAATTCCATGTTCTCAACAGTGTGCCTTCCC | + |
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Preference number: 1 (lower is better) Translates to: HSQCPLAIRSLPHHL*LHHRNSMFSTVCLP Trigger: GGGAAGGCACACTGTTGAGAACATGGAATTTCTGTGGTGCAGGCAGAGGTGGTGGGGTAGAGAACGGATAGCGAGTGGACATTGTGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| 3UTR TCA 90 bp | CCGCCTCTAACGATATCCCAATTCCCTAGAGCAGATGTACTGCAGTaGGCAAAGCTGACCTCAGACCTGAAATGCCTTCCAGTCTGGCCT | + |
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Preference number: 1 (lower is better) Translates to: PPLTISQFPRADVLQ*AKLTSDLKCLPVWP Trigger: AGGCCAGACTGGAAGGCATTTCAGGTCTGAGGTCAGCTTTGCTCACTGCAGTACATCTGCTCTAGGGAATTGGGATATCGTTAGAGGCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| 3UTR GCA 90 bp | CACCACCTCTGCCTGCACCACAGAAATTCCATGTTCTCAACAGTGTaGCTTCCCCTAACCAACCCACACTTTCTTTACCACAGTGATTCT | + |
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Preference number: 1 (lower is better) Translates to: HHLCLHHRNSMFSTV*LPLTNPHFLYHSDS Trigger: AGAATCACTGTGGTAAAGAAAGTGTGGGTTGGTTAGGGGAAGGCACACTGTTGAGAACATGGAATTTCTGTGGTGCAGGCAGAGGTGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| 3UTR CCA 90 bp | TATGATTCCAGGGGACTTTGGCTTGGTAAACTGAAGAAAAATGCTTaGCCGCCTCTAACGATATCCCAATTCCCTAGAGCAGATGTACTG | + |
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Preference number: 1 (lower is better) Translates to: YDSRGLWLGKLKKNA*PPLTISQFPRADVL Trigger: CAGTACATCTGCTCTAGGGAATTGGGATATCGTTAGAGGCGGCCAAGCATTTTTCTTCAGTTTACCAAGCCAAAGTCCCCTGGAATCATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| 3UTR CCA 90 bp | TTGTCCTTAATTCCAGGCAGTGCAAGATATGATTCCAGGGGACTTTaGCTTGGTAAACTGAAGAAAAATGCTTGGCCGCCTCTAACGATA | + |
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Preference number: 1 (lower is better) Translates to: LSLIPGSARYDSRGL*LGKLKKNAWPPLTI Trigger: TATCGTTAGAGGCGGCCAAGCATTTTTCTTCAGTTTACCAAGCCAAAGTCCCCTGGAATCATATCTTGCACTGCCTGGAATTAAGGACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| 3UTR-3UTR GCA 90 bp | TCCAGGAACACCTGGGGAGCAACGGGGTCTAGGGTAGGAGGGAAATGGCGCCCCCTACCCCACCACCTCTaGCTGCACCACAGAAATTCC | + |
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Preference number: 2 (lower is better) Translates to: SRNTWGATGSRVGGKWRPLPHHL*LHHRNS Trigger: GGAATTTCTGTGGTGCAGGCAGAGGTGGTGGGGTAG...GGGGCGCCATTTCCCTCCTACCCTAGACCCCGTTGCTCCCCAGGTGTTCCTGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGAAGGCAGGAGGAGGGGCCCCCAGGGAATACATGAGAGAACCAATTCTGACAGGAGCAGCAGTCTGTaGTGGCAGTTTTCCCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: KEGRRRGPQGIHERTNSDRSSSL*WQFSLL Trigger: GAGGAGGGAAAACTGCCACCACAGACTGCTGCTCCT...GTCAGAATTGGTTCTCTCATGTATTCCCTGGGGGCCCCTCCTCCTGCCTTCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| 3UTR-3UTR CAA 90 bp | TCCAGGAACACCTGGGGAGCAACGGGGTCTAGGGTAGGAGGGAAATGGCGCCCCGTGAGGTCTGTCGCTTaGGTTTTCCAAGGAGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: SRNTWGATGSRVGGKWRPVRSVA*VFQGAA Trigger: TGCTGCTCCTTGGAAAACCAAAGCGACAGACCTCAC...GGGGCGCCATTTCCCTCCTACCCTAGACCCCGTTGCTCCCCAGGTGTTCCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| 3UTR CCA 72 bp | GTCTGTCGCTTTGGTTTTCCAAGGAGCAGCAGTCTGTaGTGGCAGTTTTCCCTCCTCTGTGGCAGGCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: VCRFGFPRSSSL*WQFSLLCGRLA Trigger: GGCCAGCCTGCCACAGAGGAGGGAAAACTGCCACCACAGACTGCTGCTCCTTGGAAAACCAAAGCGACAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| 3UTR CCA 72 bp | GTCATCATGTCAGACATGGGAGGCTCCCCGGATACTTaGCATGTAGCACCTGCTTCCAGGAACACCTGGGGA | + |
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Preference number: 3 (lower is better) Translates to: VIMSDMGGSPDT*HVAPASRNTWG Trigger: TCCCCAGGTGTTCCTGGAAGCAGGTGCTACATGCCAAGTATCCGGGGAGCCTCCCATGTCTGACATGATGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| 3UTR GCA 72 bp | CACTCGCTATCCGTTCTCTACCCCACCACCTCTGCCTaGACCACAGAAATTCCATGTTCTCAACAGTGTGCC | + |
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Preference number: 3 (lower is better) Translates to: HSLSVLYPTTSA*TTEIPCSQQCA Trigger: GGCACACTGTTGAGAACATGGAATTTCTGTGGTGCAGGCAGAGGTGGTGGGGTAGAGAACGGATAGCGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| 3UTR TCA 72 bp | ACGATATCCCAATTCCCTAGAGCAGATGTACTGCAGTaGGCAAAGCTGACCTCAGACCTGAAATGCCTTCCA | + |
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Preference number: 3 (lower is better) Translates to: TISQFPRADVLQ*AKLTSDLKCLP Trigger: TGGAAGGCATTTCAGGTCTGAGGTCAGCTTTGCTCACTGCAGTACATCTGCTCTAGGGAATTGGGATATCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| 3UTR CCA 72 bp | ATTCCAGGCAGTGCAAGATATGATTCCAGGGGACTTTaGCTTGGTAAACTGAAGAAAAATGCTTGGCCGCCT | + |
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Preference number: 3 (lower is better) Translates to: IPGSARYDSRGL*LGKLKKNAWPP Trigger: AGGCGGCCAAGCATTTTTCTTCAGTTTACCAAGCCAAAGTCCCCTGGAATCATATCTTGCACTGCCTGGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| 3UTR CCA 72 bp | TATTTGTATTTGTCTTTATACTTCAGTCTGTGCATCTaGGGCCGAGTCATCATGTCAGACATGGGAGGCTCC | + |
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Preference number: 3 (lower is better) Translates to: YLYLSLYFSLCI*GRVIMSDMGGS Trigger: GGAGCCTCCCATGTCTGACATGATGACTCGGCCCCAGATGCACAGACTGAAGTATAAAGACAAATACAAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS-3UTR CCA 90 bp | TCCAGGAACACCTGGGGAGCAACGGGGTCTAGGGTAGGAGGGAAATGGCGCCCCGCTTGGAGCTGGGGTTaGGCACCCGCAAGACCCGGA | + |
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Preference number: 4 (lower is better) Translates to: SRNTWGATGSRVGGKWRPAWSWG*APARPG Trigger: TCCGGGTCTTGCGGGTGCCCAACCCCAGCTCCAAGC...GGGGCGCCATTTCCCTCCTACCCTAGACCCCGTTGCTCCCCAGGTGTTCCTGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS-3UTR GCA 90 bp | GGAGGCTCCCCGGATACTTGGCATGTAGCACCTGCTTCCAGGAACACCTGGGGAGGGTTGTGTCTGCGCTaGGGAGGTATGGGCAAGGGC | + |
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Preference number: 4 (lower is better) Translates to: GGSPDTWHVAPASRNTWGGLCLR*GGMGKG Trigger: GCCCTTGCCCATACCTCCGCAGCGCAGACACAACCC...TCCCCAGGTGTTCCTGGAAGCAGGTGCTACATGCCAAGTATCCGGGGAGCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS-3UTR CCA 90 bp | GGAGGCTCCCCGGATACTTGGCATGTAGCACCTGCTTCCAGGAACACCTGGGGATCTGCTCTGTGCGCTTaGAGCTGGGGTTGGGCACCC | + |
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Preference number: 4 (lower is better) Translates to: GGSPDTWHVAPASRNTWGSALCA*SWGWAP Trigger: GGGTGCCCAACCCCAGCTCCAAGCGCACAGAGCAGA...TCCCCAGGTGTTCCTGGAAGCAGGTGCTACATGCCAAGTATCCGGGGAGCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS-3UTR CCA 90 bp | TTCCAGAAGGAAGCCTCCCTCTCGGCCTTTCGCCGGGAGCCAGGGCTTCTGGGCGCTGTCCAGTCGGTGTaGGGGGATCATCATGAGGAT | + |
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Preference number: 4 (lower is better) Translates to: FQKEASLSAFRREPGLLGAVQSV*GDHHED Trigger: ATCCTCATGATGATCCCCCCACACCGACTGGACAGC...GCCCAGAAGCCCTGGCTCCCGGCGAAAGGCCGAGAGGGAGGCTTCCTTCTGGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS-3UTR GCA 90 bp | TTCCAGAAGGAAGCCTCCCTCTCGGCCTTTCGCCGGGAGCCAGGGCTTCTGGGCGGTGCTGTTGTAAAGTaGCAGGACCTGATAGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: FQKEASLSAFRREPGLLGGAVVK*QDLIGD Trigger: GTCCCCTATCAGGTCCTGGCACTTTACAACAGCACC...GCCCAGAAGCCCTGGCTCCCGGCGAAAGGCCGAGAGGGAGGCTTCCTTCTGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS-3UTR CCA 90 bp | TCCAGGAACACCTGGGGAGCAACGGGGTCTAGGGTAGGAGGGAAATGGCGCCCCGGCCGAAGTCCAACGTaGTGCAAGTGGACAGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: SRNTWGATGSRVGGKWRPGRSPT*CKWTER Trigger: TCTCTCTGTCCACTTGCACCACGTTGGACTTCGGCC...GGGGCGCCATTTCCCTCCTACCCTAGACCCCGTTGCTCCCCAGGTGTTCCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS-3UTR CCA 90 bp | AAGGAAGGCAGGAGGAGGGGCCCCCAGGGAATACATGAGAGAACCAATTCTGACCTGACTGCCCTGGCCTaGGCTGTCCAGTCGGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: KEGRRRGPQGIHERTNSDLTALA*AVQSVW Trigger: CCACACCGACTGGACAGCCCAGGCCAGGGCAGTCAG...GTCAGAATTGGTTCTCTCATGTATTCCCTGGGGGCCCCTCCTCCTGCCTTCCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS-3UTR CCA 90 bp | ACCACCTCTGCCTGCACCACAGAAATTCCATGTTCTCAACAGTGTGCCTTCCCCAGGGGCTCCAGGTCCTaGGGGACGCAGCATGGCGAG | + |
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Preference number: 4 (lower is better) Translates to: TTSACTTEIPCSQQCAFPRGSRS*GTQHGE Trigger: CTCGCCATGCTGCGTCCCCCAGGACCTGGAGCCCCT...GGGGAAGGCACACTGTTGAGAACATGGAATTTCTGTGGTGCAGGCAGAGGTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS-3UTR GCA 90 bp | AAGGAAGGCAGGAGGAGGGGCCCCCAGGGAATACATGAGAGAACCAATTCTGACCCGAGGTCTCCTGAGTaGAGCCTTCCTCCCTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: KEGRRRGPQGIHERTNSDPRSPE*SLPPSP Trigger: GGGAGAGGGAGGAAGGCTGCACTCAGGAGACCTCGG...GTCAGAATTGGTTCTCTCATGTATTCCCTGGGGGCCCCTCCTCCTGCCTTCCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS-3UTR GCA 90 bp | TTCCAGAAGGAAGCCTCCCTCTCGGCCTTTCGCCGGGAGCCAGGGCTTCTGGGCAGTTCTCCTCCAGGTTaGGGAAGCAGTAATTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: FQKEASLSAFRREPGLLGSSPPG*GSSNWC Trigger: ACACCAATTACTGCTTCCGCAACCTGGAGGAGAACT...GCCCAGAAGCCCTGGCTCCCGGCGAAAGGCCGAGAGGGAGGCTTCCTTCTGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS-3UTR CCA 90 bp | AAGGAAGGCAGGAGGAGGGGCCCCCAGGGAATACATGAGAGAACCAATTCTGACCTGTGCGCTTGGAGCTaGGGTTGGGCACCCGCAAGA | + |
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Preference number: 4 (lower is better) Translates to: KEGRRRGPQGIHERTNSDLCAWS*GWAPAR Trigger: TCTTGCGGGTGCCCAACCCCAGCTCCAAGCGCACAG...GTCAGAATTGGTTCTCTCATGTATTCCCTGGGGGCCCCTCCTCCTGCCTTCCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| 3UTR CAA 72 bp | AGTCATCATGTCAGACATGGGAGGCTCCCCGGATACTaGGCATGTAGCACCTGCTTCCAGGAACACCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: SHHVRHGRLPGY*ACSTCFQEHLG Trigger: CCCCAGGTGTTCCTGGAAGCAGGTGCTACATGCCAAGTATCCGGGGAGCCTCCCATGTCTGACATGATGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS-3UTR GCA 90 bp | AAGGAAGGCAGGAGGAGGGGCCCCCAGGGAATACATGAGAGAACCAATTCTGACCAAGACCCGGAACTCTaGCCGGAACAGATTGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: KEGRRRGPQGIHERTNSDQDPEL*PEQIGS Trigger: GGAACCAATCTGTTCCGGGCAGAGTTCCGGGTCTTG...GTCAGAATTGGTTCTCTCATGTATTCCCTGGGGGCCCCTCCTCCTGCCTTCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS-3UTR CCA 90 bp | GAGGTCTGTCGCTTTGGTTTTCCAAGGAGCAGCAGTCTGTGGTGGCAGTTTTCCCAGCGGTGCCCCTTGTaGGCAGATTCTTGCCACCTA | + |
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Preference number: 4 (lower is better) Translates to: EVCRFGFPRSSSLWWQFSQRCPL*ADSCHL Trigger: TAGGTGGCAAGAATCTGCCCACAAGGGGCACCGCTG...GGAAAACTGCCACCACAGACTGCTGCTCCTTGGAAAACCAAAGCGACAGACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS-3UTR CCA 90 bp | AAGGAAGGCAGGAGGAGGGGCCCCCAGGGAATACATGAGAGAACCAATTCTGACTGCGGAAGCAGTAATTaGTGTCCAGGGCCCTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: KEGRRRGPQGIHERTNSDCGSSN*CPGPSS Trigger: AGAAGAGGGCCCTGGACACCAATTACTGCTTCCGCA...GTCAGAATTGGTTCTCTCATGTATTCCCTGGGGGCCCCTCCTCCTGCCTTCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS-3UTR CCA 90 bp | AAGGAAGGCAGGAGGAGGGGCCCCCAGGGAATACATGAGAGAACCAATTCTGACCTCTTCTTCTTGATGTaGCCGAAGTCCAACGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: KEGRRRGPQGIHERTNSDLFFLM*PKSNVV Trigger: CACCACGTTGGACTTCGGCCACATCAAGAAGAAGAG...GTCAGAATTGGTTCTCTCATGTATTCCCTGGGGGCCCCTCCTCCTGCCTTCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS-3UTR CCA 90 bp | TCGCTTTGGTTTTCCAAGGAGCAGCAGTCTGTGGTGGCAGTTTTCCCTCCTCTGCTATGTAGCGCTGCTTaGCTATGTGCTCATCCGGTC | + |
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Preference number: 4 (lower is better) Translates to: SLWFSKEQQSVVAVFPPLLCSAA*LCAHPV Trigger: GACCGGATGAGCACATAGCCAAGCAGCGCTACATAG...CAGAGGAGGGAAAACTGCCACCACAGACTGCTGCTCCTTGGAAAACCAAAGCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS-3UTR CCA 90 bp | CCCCACCACCTCTGCCTGCACCACAGAAATTCCATGTTCTCAACAGTGTGCCTTCCACATAGTACAAGATaGTCAGGGGCTCCAGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: PHHLCLHHRNSMFSTVCLPHSTR*SGAPGP Trigger: AGGACCTGGAGCCCCTGACCATCTTGTACTATGTGG...AAGGCACACTGTTGAGAACATGGAATTTCTGTGGTGCAGGCAGAGGTGGTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS-3UTR GCA 90 bp | CACCACAGAAATTCCATGTTCTCAACAGTGTGCCTTCCCCTAACCAACCCACACCGAAGTCCAACGTGGTaGAAGTGGACAGAGAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: HHRNSMFSTVCLPLTNPHRSPTW*KWTERG Trigger: GCCTCTCTCTGTCCACTTGCACCACGTTGGACTTCG...GTGTGGGTTGGTTAGGGGAAGGCACACTGTTGAGAACATGGAATTTCTGTGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS-3UTR CCA 90 bp | TCGCTTTGGTTTTCCAAGGAGCAGCAGTCTGTGGTGGCAGTTTTCCCTCCTCTGTGCTCCGCCAGTCCCTaGATCATGTCGAATTTATGG | + |
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Preference number: 4 (lower is better) Translates to: SLWFSKEQQSVVAVFPPLCSASP*IMSNLW Trigger: CCATAAATTCGACATGATCCAGGGACTGGCGGAGCA...CAGAGGAGGGAAAACTGCCACCACAGACTGCTGCTCCTTGGAAAACCAAAGCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS-3UTR CCA 90 bp | TCGCTTTGGTTTTCCAAGGAGCAGCAGTCTGTGGTGGCAGTTTTCCCTCCTCTGTTTCCAGACCCAAGTTaGACTCTCTCCTCAACAGCC | + |
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Preference number: 4 (lower is better) Translates to: SLWFSKEQQSVVAVFPPLFPDPS*TLSSTA Trigger: GGCTGTTGAGGAGAGAGTCCAACTTGGGTCTGGAAA...CAGAGGAGGGAAAACTGCCACCACAGACTGCTGCTCCTTGGAAAACCAAAGCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS-3UTR CCA 90 bp | CCCCACCACCTCTGCCTGCACCACAGAAATTCCATGTTCTCAACAGTGTGCCTTAGGTCTCCACGGCCATaGTCATCTTCATTGTCCACT | + |
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Preference number: 4 (lower is better) Translates to: PHHLCLHHRNSMFSTVCLRSPRP*SSSLST Trigger: AGTGGACAATGAAGATGACCATGGCCGTGGAGACCT...AAGGCACACTGTTGAGAACATGGAATTTCTGTGGTGCAGGCAGAGGTGGTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS-3UTR CCA 90 bp | TCGCTTTGGTTTTCCAAGGAGCAGCAGTCTGTGGTGGCAGTTTTCCCTCCTCTGCATGAGGATCAGGTGTaGGTTGTGGTGATCCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: SLWFSKEQQSVVAVFPPLHEDQV*VVVILL Trigger: CAAAAGGATCACCACAACCCACACCTGATCCTCATG...CAGAGGAGGGAAAACTGCCACCACAGACTGCTGCTCCTTGGAAAACCAAAGCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS-3UTR CCA 90 bp | CTTTGGCTTGGTAAACTGAAGAAAAATGCTTGGCCGCCTCTAACGATATCCCAACCAAGCACCGTGCTATaGGTTGTGTCTGCGCTGCGG | + |
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Preference number: 4 (lower is better) Translates to: LWLGKLKKNAWPPLTISQPSTVL*VVSALR Trigger: CCGCAGCGCAGACACAACCCATAGCACGGTGCTTGG...TTGGGATATCGTTAGAGGCGGCCAAGCATTTTTCTTCAGTTTACCAAGCCAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS-3UTR GCA 90 bp | TTTGTCTTTATACTTCAGTCTGTGCATCTGGGGCCGAGTCATCATGTCAGACATGCTATGGGTTGTGTCTaGGCTGCGGAGGTATGGGCA | + |
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Preference number: 4 (lower is better) Translates to: FVFILQSVHLGPSHHVRHAMGCV*AAEVWA Trigger: TGCCCATACCTCCGCAGCGCAGACACAACCCATAGC...ATGTCTGACATGATGACTCGGCCCCAGATGCACAGACTGAAGTATAAAGACAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS-3UTR TCA 90 bp | ATTTGTCTTTATACTTCAGTCTGTGCATCTGGGGCCGAGTCATCATGTCAGACATGGACAGAGAGAGGCTaGTTGTGGCCAAGTTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: ICLYTSVCASGAESSCQTWTERG*LWPSSA Trigger: TGCTGAACTTGGCCACAATCAGCCTCTCTCTGTCCA...TGTCTGACATGATGACTCGGCCCCAGATGCACAGACTGAAGTATAAAGACAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS-3UTR TCA 90 bp | ATGACTCATGATGCTGATCGAGGTGAAAAGACAGTTGCAGAAAGAACGGATTGTCCACCCTCTTCTTCTTaGTGTGGCCGAAGTCCAACG | + |
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Preference number: 4 (lower is better) Translates to: MTHDADRGEKTVAERTDCPPSSS*CGRSPT Trigger: CGTTGGACTTCGGCCACATCAAGAAGAAGAGGGTGG...ACAATCCGTTCTTTCTGCAACTGTCTTTTCACCTCGATCAGCATCATGAGTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS-3UTR TCA 90 bp | ATGACTCATGATGCTGATCGAGGTGAAAAGACAGTTGCAGAAAGAACGGATTGTCGCGCACAGTGTCAGTaGCATCGAAAGACAGCCATT | + |
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Preference number: 4 (lower is better) Translates to: MTHDADRGEKTVAERTDCRAQCQ*HRKTAI Trigger: AATGGCTGTCTTTCGATGTCACTGACACTGTGCGCG...ACAATCCGTTCTTTCTGCAACTGTCTTTTCACCTCGATCAGCATCATGAGTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS-3UTR TCA 90 bp | AAAAATGCTTGGCCGCCTCTAACGATATCCCAATTCCCTAGAGCAGATGTACTGAGGTGTGGGTTGTGGTaGTCCTTTTGCTTCTTGAGA | + |
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Preference number: 4 (lower is better) Translates to: KNAWPPLTISQFPRADVLRCGLW*SFCFLR Trigger: TCTCAAGAAGCAAAAGGATCACCACAACCCACACCT...CAGTACATCTGCTCTAGGGAATTGGGATATCGTTAGAGGCGGCCAAGCATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS-3UTR GCA 90 bp | ATTTGTCTTTATACTTCAGTCTGTGCATCTGGGGCCGAGTCATCATGTCAGACAAAGAGCTCAATTCTCTaGTCTGTGCGCTTGGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: ICLYTSVCASGAESSCQTKSSIL*SVRLEL Trigger: CAGCTCCAAGCGCACAGAGCAGAGAATTGAGCTCTT...TGTCTGACATGATGACTCGGCCCCAGATGCACAGACTGAAGTATAAAGACAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS-3UTR GCA 90 bp | CTTTGGCTTGGTAAACTGAAGAAAAATGCTTGGCCGCCTCTAACGATATCCCAATTGTGGGCAGATTCTTaGCACCTATGTAGCGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: LWLGKLKKNAWPPLTISQLWADS*HLCSAA Trigger: AGCAGCGCTACATAGGTGGCAAGAATCTGCCCACAA...TTGGGATATCGTTAGAGGCGGCCAAGCATTTTTCTTCAGTTTACCAAGCCAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS-3UTR CCA 90 bp | AAAAATGCTTGGCCGCCTCTAACGATATCCCAATTCCCTAGAGCAGATGTACTGCCAGTATGTCTCCATTaGGCTGAAAGGTGTGACATG | + |
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Preference number: 4 (lower is better) Translates to: KNAWPPLTISQFPRADVLPVCLH*AERCDM Trigger: CATGTCACACCTTTCAGCCCAATGGAGACATACTGG...CAGTACATCTGCTCTAGGGAATTGGGATATCGTTAGAGGCGGCCAAGCATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS-3UTR CCA 90 bp | CTTTGGCTTGGTAAACTGAAGAAAAATGCTTGGCCGCCTCTAACGATATCCCAACTGCCCGGAACAGATTaGTTCCATTTTTCTCCACTG | + |
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Preference number: 4 (lower is better) Translates to: LWLGKLKKNAWPPLTISQLPGTD*FHFSPL Trigger: CAGTGGAGAAAAATGGAACCAATCTGTTCCGGGCAG...TTGGGATATCGTTAGAGGCGGCCAAGCATTTTTCTTCAGTTTACCAAGCCAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS-3UTR TCA 90 bp | AAAAATGCTTGGCCGCCTCTAACGATATCCCAATTCCCTAGAGCAGATGTACTGATTTCCATCACCTCATaGACATTTTCCAGTATGTCT | + |
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Preference number: 4 (lower is better) Translates to: KNAWPPLTISQFPRADVLISITS*TFSSMS Trigger: AGACATACTGGAAAATGTTCATGAGGTGATGGAAAT...CAGTACATCTGCTCTAGGGAATTGGGATATCGTTAGAGGCGGCCAAGCATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS-3UTR CAA 90 bp | TTCCAGAAGGAAGCCTCCCTCTCGGCCTTTCGCCGGGAGCCAGGGCTTCTGGGCCGCTTGGAGCTGGGGTaGGGCACCCGCAAGACCCGG | + |
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Preference number: 5 (lower is better) Translates to: FQKEASLSAFRREPGLLGRLELG*GTRKTR Trigger: CCGGGTCTTGCGGGTGCCCAACCCCAGCTCCAAGCG...GCCCAGAAGCCCTGGCTCCCGGCGAAAGGCCGAGAGGGAGGCTTCCTTCTGGAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS CCA 90 bp | CCGGTCGAAGTATCTGGAAGAGCTCAATTCTCTGCTCTGTGCGCTTaGAGCTGGGGTTGGGCACCCGCAAGACCCGGAACTCTGCCCGGA | + |
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Preference number: 5 (lower is better) Translates to: PVEVSGRAQFSALCA*SWGWAPARPGTLPG Trigger: TCCGGGCAGAGTTCCGGGTCTTGCGGGTGCCCAACCCCAGCTCCAAGCGCACAGAGCAGAGAATTGAGCTCTTCCAGATACTTCGACCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS-3UTR CAA 90 bp | TTCCAGAAGGAAGCCTCCCTCTCGGCCTTTCGCCGGGAGCCAGGGCTTCTGGGCGTTGTGGTGATCCTTTaGCTTCTTGAGACGCCCCAG | + |
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Preference number: 5 (lower is better) Translates to: FQKEASLSAFRREPGLLGVVVIL*LLETPQ Trigger: CTGGGGCGTCTCAAGAAGCAAAAGGATCACCACAAC...GCCCAGAAGCCCTGGCTCCCGGCGAAAGGCCGAGAGGGAGGCTTCCTTCTGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS GCA 90 bp | CTCCCCGTGCATCTCTTCCAGCAACTCCCGGGTGCTGTTGTAAAGTaGCAGGACCTGATAGGGGACGTGGGTCATCACCGATGGCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: LPVHLFQQLPGAVVK*QDLIGDVGHHRWLR Trigger: CCTGAGCCATCGGTGATGACCCACGTCCCCTATCAGGTCCTGGCACTTTACAACAGCACCCGGGAGTTGCTGGAAGAGATGCACGGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS GCA 90 bp | AGGCAGACGCCTCTGGGTTCAGGGTGTTGTATAGTCCAAGCACCGTaGTATGGGTTGTGTCTGCGCTGCGGAGGTATGGGCAAGGGCCTG | + |
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Preference number: 5 (lower is better) Translates to: RQTPLGSGCCIVQAP*YGLCLRCGGMGKGL Trigger: CAGGCCCTTGCCCATACCTCCGCAGCGCAGACACAACCCATAGCACGGTGCTTGGACTATACAACACCCTGAACCCAGAGGCGTCTGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS CCA 90 bp | GACGCCTCTGGGTTCAGGGTGTTGTATAGTCCAAGCACCGTGCTATaGGTTGTGTCTGCGCTGCGGAGGTATGGGCAAGGGCCTGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: DASGFRVLYSPSTVL*VVSALRRYGQGPEQ Trigger: CTGCTCAGGCCCTTGCCCATACCTCCGCAGCGCAGACACAACCCATAGCACGGTGCTTGGACTATACAACACCCTGAACCCAGAGGCGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS GCA 90 bp | GCTCATCCGGTCGAAGTATCTGGAAGAGCTCAATTCTCTGCTCTGTaGGCTTGGAGCTGGGGTTGGGCACCCGCAAGACCCGGAACTCTG | + |
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Preference number: 5 (lower is better) Translates to: AHPVEVSGRAQFSAL*AWSWGWAPARPGTL Trigger: CAGAGTTCCGGGTCTTGCGGGTGCCCAACCCCAGCTCCAAGCGCACAGAGCAGAGAATTGAGCTCTTCCAGATACTTCGACCGGATGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS GCA 90 bp | GCTATGTGCTCATCCGGTCGAAGTATCTGGAAGAGCTCAATTCTCTaGTCTGTGCGCTTGGAGCTGGGGTTGGGCACCCGCAAGACCCGG | + |
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Preference number: 5 (lower is better) Translates to: AMCSSGRSIWKSSIL*SVRLELGLGTRKTR Trigger: CCGGGTCTTGCGGGTGCCCAACCCCAGCTCCAAGCGCACAGAGCAGAGAATTGAGCTCTTCCAGATACTTCGACCGGATGAGCACATAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS CCA 90 bp | GAAGTATCTGGAAGAGCTCAATTCTCTGCTCTGTGCGCTTGGAGCTaGGGTTGGGCACCCGCAAGACCCGGAACTCTGCCCGGAACAGAT | + |
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Preference number: 5 (lower is better) Translates to: EVSGRAQFSALCAWS*GWAPARPGTLPGTD Trigger: ATCTGTTCCGGGCAGAGTTCCGGGTCTTGCGGGTGCCCAACCCCAGCTCCAAGCGCACAGAGCAGAGAATTGAGCTCTTCCAGATACTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS-3UTR CAA 90 bp | TCCAGGAACACCTGGGGAGCAACGGGGTCTAGGGTAGGAGGGAAATGGCGCCCCTCTGCCCGGAACAGATaGGTTCCATTTTTCTCCACT | + |
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Preference number: 5 (lower is better) Translates to: SRNTWGATGSRVGGKWRPSARNR*VPFFST Trigger: AGTGGAGAAAAATGGAACCAATCTGTTCCGGGCAGA...GGGGCGCCATTTCCCTCCTACCCTAGACCCCGTTGCTCCCCAGGTGTTCCTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS-3UTR CAA 90 bp | TGCCACTCACAATGTCCACTCGCTATCCGTTCTCTACCCCACCACCTCTGCCTGATTCAGCGGTGCCCCTaGTGGGCAGATTCTTGCCAC | + |
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Preference number: 5 (lower is better) Translates to: CHSQCPLAIRSLPHHLCLIQRCP*WADSCH Trigger: GTGGCAAGAATCTGCCCACAAGGGGCACCGCTGAAT...CAGGCAGAGGTGGTGGGGTAGAGAACGGATAGCGAGTGGACATTGTGAGTGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS TCA 90 bp | CCAAGTTGGACTCTCTCCTCAACAGCCACTCGCGCACAGTGTCAGTaGCATCGAAAGACAGCCATTCAGCGGTGCCCCTTGTGGGCAGAT | + |
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Preference number: 5 (lower is better) Translates to: PSWTLSSTATRAQCQ*HRKTAIQRCPLWAD Trigger: ATCTGCCCACAAGGGGCACCGCTGAATGGCTGTCTTTCGATGTCACTGACACTGTGCGCGAGTGGCTGTTGAGGAGAGAGTCCAACTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS-3UTR CAA 90 bp | CACCACAGAAATTCCATGTTCTCAACAGTGTGCCTTCCCCTAACCAACCCACACCTCTGCTCTGTGCGCTaGGAGCTGGGGTTGGGCACC | + |
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Preference number: 5 (lower is better) Translates to: HHRNSMFSTVCLPLTNPHLCSVR*ELGLGT Trigger: GGTGCCCAACCCCAGCTCCAAGCGCACAGAGCAGAG...GTGTGGGTTGGTTAGGGGAAGGCACACTGTTGAGAACATGGAATTTCTGTGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS GCA 90 bp | CATCGAAAGACAGCCATTCAGCGGTGCCCCTTGTGGGCAGATTCTTaGCACCTATGTAGCGCTGCTTGGCTATGTGCTCATCCGGTCGAA | + |
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Preference number: 5 (lower is better) Translates to: HRKTAIQRCPLWADS*HLCSAAWLCAHPVE Trigger: TTCGACCGGATGAGCACATAGCCAAGCAGCGCTACATAGGTGGCAAGAATCTGCCCACAAGGGGCACCGCTGAATGGCTGTCTTTCGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS GCA 90 bp | GGGTGTTGTATAGTCCAAGCACCGTGCTATGGGTTGTGTCTGCGCTaGGGAGGTATGGGCAAGGGCCTGAGCAGAAGTTGGCATAGTAAC | + |
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Preference number: 5 (lower is better) Translates to: GCCIVQAPCYGLCLR*GGMGKGLSRSWHSN Trigger: GTTACTATGCCAACTTCTGCTCAGGCCCTTGCCCATACCTCCGCAGCGCAGACACAACCCATAGCACGGTGCTTGGACTATACAACACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS-3UTR CAA 90 bp | AAGGAAGGCAGGAGGAGGGGCCCCCAGGGAATACATGAGAGAACCAATTCTGACCTGGTGAGCCTGAGCTaGCTCAAGATCTGTCCCCTA | + |
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Preference number: 5 (lower is better) Translates to: KEGRRRGPQGIHERTNSDLVSLS*LKICPL Trigger: TAGGGGACAGATCTTGAGCAAGCTCAGGCTCACCAG...GTCAGAATTGGTTCTCTCATGTATTCCCTGGGGGCCCCTCCTCCTGCCTTCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS CCA 90 bp | CGGTGCCCCTTGTGGGCAGATTCTTGCCACCTATGTAGCGCTGCTTaGCTATGTGCTCATCCGGTCGAAGTATCTGGAAGAGCTCAATTC | + |
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Preference number: 5 (lower is better) Translates to: RCPLWADSCHLCSAA*LCAHPVEVSGRAQF Trigger: GAATTGAGCTCTTCCAGATACTTCGACCGGATGAGCACATAGCCAAGCAGCGCTACATAGGTGGCAAGAATCTGCCCACAAGGGGCACCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS-3UTR CAA 90 bp | CCACCTCTGCCTGCACCACAGAAATTCCATGTTCTCAACAGTGTGCCTTCCCCTTCCACCCTCTTCTTCTaGATGTGGCCGAAGTCCAAC | + |
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Preference number: 5 (lower is better) Translates to: PPLPAPQKFHVLNSVPSPSTLFF*MWPKSN Trigger: GTTGGACTTCGGCCACATCAAGAAGAAGAGGGTGGA...AGGGGAAGGCACACTGTTGAGAACATGGAATTTCTGTGGTGCAGGCAGAGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS TCA 90 bp | GTATGTCTCCATTGGGCTGAAAGGTGTGACATGGACAGTGGATGCTaGTTTCCAGACCCAAGTTGGACTCTCTCCTCAACAGCCACTCGC | + |
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Preference number: 5 (lower is better) Translates to: VCLHWAERCDMDSGC*FPDPSWTLSSTATR Trigger: GCGAGTGGCTGTTGAGGAGAGAGTCCAACTTGGGTCTGGAAATCAGCATCCACTGTCCATGTCACACCTTTCAGCCCAATGGAGACATAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS CCA 90 bp | CTCAAGATCTGTCCCCTAATGGCTTCCACCCTCTTCTTCTTGATGTaGCCGAAGTCCAACGTGGTGCAAGTGGACAGAGAGAGGCTGATT | + |
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Preference number: 5 (lower is better) Translates to: LKICPLMASTLFFLM*PKSNVVQVDRERLI Trigger: AATCAGCCTCTCTCTGTCCACTTGCACCACGTTGGACTTCGGCCACATCAAGAAGAAGAGGGTGGAAGCCATTAGGGGACAGATCTTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS CCA 90 bp | TGTGCTCCGCCAGTCCCTGGATCATGTCGAATTTATGGATCTCTTTaGCATAGTACTCAGACTCCGAGGTCTCCTGAGTGCAGCCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: CAPPVPGSCRIYGSL*HSTQTPRSPECSLP Trigger: AGGAAGGCTGCACTCAGGAGACCTCGGAGTCTGAGTACTATGCCAAAGAGATCCATAAATTCGACATGATCCAGGGACTGGCGGAGCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS-3UTR CAA 90 bp | ACCACCTCTGCCTGCACCACAGAAATTCCATGTTCTCAACAGTGTGCCTTCCCCTTAGAGGTAATTCCTTaGGGGCAGACGGCCAGTTCA | + |
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Preference number: 5 (lower is better) Translates to: TTSACTTEIPCSQQCAFPLEVIP*GQTASS Trigger: TGAACTGGCCGTCTGCCCCAAAGGAATTACCTCTAA...GGGGAAGGCACACTGTTGAGAACATGGAATTTCTGTGGTGCAGGCAGAGGTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS-3UTR CAA 90 bp | GAGGTCTGTCGCTTTGGTTTTCCAAGGAGCAGCAGTCTGTGGTGGCAGTTTTCCTCATTGTCCACTCCTTaGAATTTGATTTCCATCACC | + |
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Preference number: 5 (lower is better) Translates to: EVCRFGFPRSSSLWWQFSSLSTP*NLISIT Trigger: GGTGATGGAAATCAAATTCAAAGGAGTGGACAATGA...GGAAAACTGCCACCACAGACTGCTGCTCCTTGGAAAACCAAAGCGACAGACCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS-3UTR CAA 90 bp | ATGACTCATGATGCTGATCGAGGTGAAAAGACAGTTGCAGAAAGAACGGATTGTATTTCCAGACCCAAGTaGGACTCTCTCCTCAACAGC | + |
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Preference number: 5 (lower is better) Translates to: MTHDADRGEKTVAERTDCISRPK*DSLLNS Trigger: GCTGTTGAGGAGAGAGTCCAACTTGGGTCTGGAAAT...ACAATCCGTTCTTTCTGCAACTGTCTTTTCACCTCGATCAGCATCATGAGTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS-3UTR CAA 90 bp | CTTTGGCTTGGTAAACTGAAGAAAAATGCTTGGCCGCCTCTAACGATATCCCAACCATGGTCATCTTCATaGTCCACTCCTTTGAATTTG | + |
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Preference number: 5 (lower is better) Translates to: LWLGKLKKNAWPPLTISQPWSSS*STPLNL Trigger: CAAATTCAAAGGAGTGGACAATGAAGATGACCATGG...TTGGGATATCGTTAGAGGCGGCCAAGCATTTTTCTTCAGTTTACCAAGCCAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS CAA 90 bp | CCTCTGGGTTCAGGGTGTTGTATAGTCCAAGCACCGTGCTATGGGTaGTGTCTGCGCTGCGGAGGTATGGGCAAGGGCCTGAGCAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: PLGSGCCIVQAPCYG*CLRCGGMGKGLSRS Trigger: ACTTCTGCTCAGGCCCTTGCCCATACCTCCGCAGCGCAGACACAACCCATAGCACGGTGCTTGGACTATACAACACCCTGAACCCAGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS GCA 72 bp | ATAGTCCAAGCACCGTGCTATGGGTTGTGTCTGCGCTaGGGAGGTATGGGCAAGGGCCTGAGCAGAAGTTGG | + |
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Preference number: 6 (lower is better) Translates to: IVQAPCYGLCLR*GGMGKGLSRSW Trigger: CCAACTTCTGCTCAGGCCCTTGCCCATACCTCCGCAGCGCAGACACAACCCATAGCACGGTGCTTGGACTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS CCA 72 bp | GTATCTGGAAGAGCTCAATTCTCTGCTCTGTGCGCTTaGAGCTGGGGTTGGGCACCCGCAAGACCCGGAACT | + |
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Preference number: 6 (lower is better) Translates to: VSGRAQFSALCA*SWGWAPARPGT Trigger: AGTTCCGGGTCTTGCGGGTGCCCAACCCCAGCTCCAAGCGCACAGAGCAGAGAATTGAGCTCTTCCAGATAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS CCA 72 bp | GGGTTCAGGGTGTTGTATAGTCCAAGCACCGTGCTATaGGTTGTGTCTGCGCTGCGGAGGTATGGGCAAGGG | + |
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Preference number: 6 (lower is better) Translates to: GFRVLYSPSTVL*VVSALRRYGQG Trigger: CCCTTGCCCATACCTCCGCAGCGCAGACACAACCCATAGCACGGTGCTTGGACTATACAACACCCTGAACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS CAA 72 bp | TCAGGGTGTTGTATAGTCCAAGCACCGTGCTATGGGTaGTGTCTGCGCTGCGGAGGTATGGGCAAGGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SGCCIVQAPCYG*CLRCGGMGKGL Trigger: CAGGCCCTTGCCCATACCTCCGCAGCGCAGACACAACCCATAGCACGGTGCTTGGACTATACAACACCCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS TCA 72 bp | ACTCTCTCCTCAACAGCCACTCGCGCACAGTGTCAGTaGCATCGAAAGACAGCCATTCAGCGGTGCCCCTTG | + |
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Preference number: 6 (lower is better) Translates to: TLSSTATRAQCQ*HRKTAIQRCPL Trigger: CAAGGGGCACCGCTGAATGGCTGTCTTTCGATGTCACTGACACTGTGCGCGAGTGGCTGTTGAGGAGAGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS GCA 72 bp | CATCTCTTCCAGCAACTCCCGGGTGCTGTTGTAAAGTaGCAGGACCTGATAGGGGACGTGGGTCATCACCGA | + |
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Preference number: 6 (lower is better) Translates to: HLFQQLPGAVVK*QDLIGDVGHHR Trigger: TCGGTGATGACCCACGTCCCCTATCAGGTCCTGGCACTTTACAACAGCACCCGGGAGTTGCTGGAAGAGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS CCA 72 bp | CACAGCAGTTCTCCTCCAGGTTGCGGAAGCAGTAATTaGTGTCCAGGGCCCTCTTCTTCCTCTGACTGCCCT | + |
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Preference number: 6 (lower is better) Translates to: HSSSPPGCGSSN*CPGPSSSSDCP Trigger: AGGGCAGTCAGAGGAAGAAGAGGGCCCTGGACACCAATTACTGCTTCCGCAACCTGGAGGAGAACTGCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS CAA 72 bp | CAGCATGGCGAGGCAGACGCCTCTGGGTTCAGGGTGTaGTATAGTCCAAGCACCGTGCTATGGGTTGTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: QHGEADASGFRV*YSPSTVLWVVS Trigger: AGACACAACCCATAGCACGGTGCTTGGACTATACAACACCCTGAACCCAGAGGCGTCTGCCTCGCCATGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS TCA 72 bp | GGATCAGGTGTGGGTTGTGGTGATCCTTTTGCTTCTTaGGACGCCCCAGGTCTCCACGGCCATGGTCATCTT | + |
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Preference number: 6 (lower is better) Translates to: GSGVGCGDPFAS*DAPGLHGHGHL Trigger: AAGATGACCATGGCCGTGGAGACCTGGGGCGTCTCAAGAAGCAAAAGGATCACCACAACCCACACCTGATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS GCA 72 bp | ACAGCCATTCAGCGGTGCCCCTTGTGGGCAGATTCTTaGCACCTATGTAGCGCTGCTTGGCTATGTGCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: TAIQRCPLWADS*HLCSAAWLCAH Trigger: ATGAGCACATAGCCAAGCAGCGCTACATAGGTGGCAAGAATCTGCCCACAAGGGGCACCGCTGAATGGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS CAA 72 bp | CATCATGAGGATCAGGTGTGGGTTGTGGTGATCCTTTaGCTTCTTGAGACGCCCCAGGTCTCCACGGCCATG | + |
|
Preference number: 6 (lower is better) Translates to: HHEDQVWVVVIL*LLETPQVSTAM Trigger: CATGGCCGTGGAGACCTGGGGCGTCTCAAGAAGCAAAAGGATCACCACAACCCACACCTGATCCTCATGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS CCA 72 bp | TGTCCCCTAATGGCTTCCACCCTCTTCTTCTTGATGTaGCCGAAGTCCAACGTGGTGCAAGTGGACAGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: CPLMASTLFFLM*PKSNVVQVDRE Trigger: CTCTCTGTCCACTTGCACCACGTTGGACTTCGGCCACATCAAGAAGAAGAGGGTGGAAGCCATTAGGGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS CAA 72 bp | GGCACCCGCAAGACCCGGAACTCTGCCCGGAACAGATaGGTTCCATTTTTCTCCACTGAGGACACATTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: GTRKTRNSARNR*VPFFSTEDTLK Trigger: TTTCAATGTGTCCTCAGTGGAGAAAAATGGAACCAATCTGTTCCGGGCAGAGTTCCGGGTCTTGCGGGTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS CCA 72 bp | TTGTGGGCAGATTCTTGCCACCTATGTAGCGCTGCTTaGCTATGTGCTCATCCGGTCGAAGTATCTGGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: LWADSCHLCSAA*LCAHPVEVSGR Trigger: TCTTCCAGATACTTCGACCGGATGAGCACATAGCCAAGCAGCGCTACATAGGTGGCAAGAATCTGCCCACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS CCA 72 bp | CCAGTCCCTGGATCATGTCGAATTTATGGATCTCTTTaGCATAGTACTCAGACTCCGAGGTCTCCTGAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: PVPGSCRIYGSL*HSTQTPRSPEC Trigger: GCACTCAGGAGACCTCGGAGTCTGAGTACTATGCCAAAGAGATCCATAAATTCGACATGATCCAGGGACTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS CCA 72 bp | TTCCAGTATGTCTCCATTGGGCTGAAAGGTGTGACATaGACAGTGGATGCTGATTTCCAGACCCAAGTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: FQYVSIGLKGVT*TVDADFQTQVG Trigger: TCCAACTTGGGTCTGGAAATCAGCATCCACTGTCCATGTCACACCTTTCAGCCCAATGGAGACATACTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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| CDS CCA 72 bp | TTTTGCTTCTTGAGACGCCCCAGGTCTCCACGGCCATaGTCATCTTCATTGTCCACTCCTTTGAATTTGATT | + |
|
Preference number: 6 (lower is better) Translates to: FCFLRRPRSPRP*SSSLSTPLNLI Trigger: AATCAAATTCAAAGGAGTGGACAATGAAGATGACCATGGCCGTGGAGACCTGGGGCGTCTCAAGAAGCAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003687.8 |
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