Pregenerated sensors for TGFB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039239Ensembl transcript IDs: ENSMUST00000045288.14, ENSMUST00000195201.2
Found 150 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCAAGCCAAATGAAAGCCAGAGCCTCGGCTGAAGAGCATGACTGCTaGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAGGAT | + |
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Preference number: 1 (lower is better) Translates to: SSQMKARASAEEHDC*VCVCVCVCVCVCKD Trigger: ATCCTTACACACACACACACACACACACACACACACACACACCCAGCAGTCATGCTCTTCAGCCGAGGCTCTGGCTTTCATTTGGCTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
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| 3UTR CCA 90 bp | CCGACACGGGGGCCATTCACTAGCAGTTGCTCTCTGTCTGTCTTCTaGCTTGCAAATTTCGTTCTTCATCTTAGTGAATTCAAGGACAGC | + |
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Preference number: 1 (lower is better) Translates to: PTRGPFTSSCSLSVF*LANFVLHLSEFKDS Trigger: GCTGTCCTTGAATTCACTAAGATGAAGAACGAAATTTGCAAGCCAGAAGACAGACAGAGAGCAACTGCTAGTGAATGGCCCCCGTGTCGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
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| 3UTR CCA 90 bp | CCTGGCTTATTTGAGTTCAAACTCCTTAAGCCATCCATGAGTTTGTaGCAAAGTATTTGGTCTCCATTTATACACCTGTTTTGTTTTCCA | + |
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Preference number: 1 (lower is better) Translates to: PGLFEFKLLKPSMSL*QSIWSPFIHLFCFP Trigger: TGGAAAACAAAACAGGTGTATAAATGGAGACCAAATACTTTGCCACAAACTCATGGATGGCTTAAGGAGTTTGAACTCAAATAAGCCAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
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| 3UTR CCA 90 bp | GAGTTCAAACTCCTTAAGCCATCCATGAGTTTGTGGCAAAGTATTTaGTCTCCATTTATACACCTGTTTTGTTTTCCAAGGGTAATGAAA | + |
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Preference number: 1 (lower is better) Translates to: EFKLLKPSMSLWQSI*SPFIHLFCFPRVMK Trigger: TTTCATTACCCTTGGAAAACAAAACAGGTGTATAAATGGAGACCAAATACTTTGCCACAAACTCATGGATGGCTTAAGGAGTTTGAACTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
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| 3UTR CAA 90 bp | GGTGAGACCACAAATAGTCCATCATTTCATGGACTGGTTTATATCTaGAAGCTCTGTGACGAGGATACCCACCCTGCAAAGCTCGCCAAC | + |
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Preference number: 2 (lower is better) Translates to: GETTNSPSFHGLVYI*KLCDEDTHPAKLAN Trigger: GTTGGCGAGCTTTGCAGGGTGGGTATCCTCGTCACAGAGCTTCAAGATATAAACCAGTCCATGAAATGATGGACTATTTGTGGTCTCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
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| 3UTR CAA 90 bp | CACGGGGGCCATTCACTAGCAGTTGCTCTCTGTCTGTCTTCTGGCTaGCAAATTTCGTTCTTCATCTTAGTGAATTCAAGGACAGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: HGGHSLAVALCLSSG*QISFFILVNSRTAP Trigger: AGGAGCTGTCCTTGAATTCACTAAGATGAAGAACGAAATTTGCAAGCCAGAAGACAGACAGAGAGCAACTGCTAGTGAATGGCCCCCGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
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| 3UTR-3UTR TCA 90 bp | ACAGGTCAACATTTCACCGGCTTGCTTAAACTGGCAAAGAACCATTTACAATTAAGGAGAGGCGTGGGGTaGAATGCGGGCTGGAAACAA | + |
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Preference number: 2 (lower is better) Translates to: TGQHFTGLLKLAKNHLQLRRGVG*NAGWKQ Trigger: TTGTTTCCAGCCCGCATTTCACCCCACGCCTCTCCT...TAATTGTAAATGGTTCTTTGCCAGTTTAAGCAAGCCGGTGAAATGTTGACCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
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| 3UTR-3UTR GCA 90 bp | TTGGGGGAGGAATGGACCCAGGTAGCTCATGTCATTAAATGGACAATACATAAAAGGCGTGGGGTGAAATaGGGGCTGGAAACAATACGT | + |
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Preference number: 2 (lower is better) Translates to: LGEEWTQVAHVIKWTIHKRRGVK*GLETIR Trigger: ACGTATTGTTTCCAGCCCGCATTTCACCCCACGCCT...TTTATGTATTGTCCATTTAATGACATGAGCTACCTGGGTCCATTCCTCCCCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
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| 3UTR-3UTR CCA 90 bp | GTGTGTTTTCAATCATGCTGGCTTCTAGACCCGTCTATTTTAATAGTATCCATGAACCCACTGTTAGCTTaGAGGAAGGGACGGGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: VCFQSCWLLDPSILIVSMNPLLA*RKGRGG Trigger: CCCTCCCCGTCCCTTCCTCCAAGCTAACAGTGGGTT...CATGGATACTATTAAAATAGACGGGTCTAGAAGCCAGCATGATTGAAAACACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
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| 3UTR-3UTR TCA 90 bp | GTACAATTTCAAAGAAATTCTCCTTGCATTCACACCTCAGTGGGCGGCCCTTCGTACGTACAACTCCACTaGACGGATTTTCCTGTTTTG | + |
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Preference number: 2 (lower is better) Translates to: VQFQRNSPCIHTSVGGPSYVQLH*TDFPVL Trigger: CAAAACAGGAAAATCCGTTCAGTGGAGTTGTACGTA...CGAAGGGCCGCCCACTGAGGTGTGAATGCAAGGAGAATTTCTTTGAAATTGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
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| 3UTR-3UTR TCA 90 bp | GTACAATTTCAAAGAAATTCTCCTTGCATTCACACCTCAGTGGGCGGCCCTTCGCAGTCACTAAGACTCTaGGTTGAGATTCTTAAACCC | + |
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Preference number: 2 (lower is better) Translates to: VQFQRNSPCIHTSVGGPSQSLRL*VEILKP Trigger: GGGTTTAAGAATCTCAACTCAGAGTCTTAGTGACTG...CGAAGGGCCGCCCACTGAGGTGTGAATGCAAGGAGAATTTCTTTGAAATTGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
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| 3UTR-3UTR CCA 90 bp | CCGCTCCCGTGGCAATATTTACTAACGGGAAAGAAGACCTGTAGAACCCACAGATCTCTGTCTGTCTTCTaGCTTGCAAATTTCGTTCTT | + |
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Preference number: 2 (lower is better) Translates to: PLPWQYLLTGKKTCRTHRSLSVF*LANFVL Trigger: AAGAACGAAATTTGCAAGCCAGAAGACAGACAGAGA...TCTGTGGGTTCTACAGGTCTTCTTTCCCGTTAGTAAATATTGCCACGGGAGCGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
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| 3UTR-3UTR TCA 90 bp | GTACAATTTCAAAGAAATTCTCCTTGCATTCACACCTCAGTGGGCGGCCCTTCGTCCTTAAGCCATCCATaGGTTTGTGGCAAAGTATTT | + |
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Preference number: 2 (lower is better) Translates to: VQFQRNSPCIHTSVGGPSSLSHP*VCGKVF Trigger: AAATACTTTGCCACAAACTCATGGATGGCTTAAGGA...CGAAGGGCCGCCCACTGAGGTGTGAATGCAAGGAGAATTTCTTTGAAATTGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
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| 3UTR-3UTR GCA 90 bp | ACAGGTCAACATTTCACCGGCTTGCTTAAACTGGCAAAGAACCATTTACAATTAAGGCGTGGGGTGAAATaGGGGCTGGAAACAATACGT | + |
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Preference number: 2 (lower is better) Translates to: TGQHFTGLLKLAKNHLQLRRGVK*GLETIR Trigger: ACGTATTGTTTCCAGCCCGCATTTCACCCCACGCCT...TAATTGTAAATGGTTCTTTGCCAGTTTAAGCAAGCCGGTGAAATGTTGACCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
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| 3UTR-3UTR CCA 90 bp | CCATCATTTCATGGACTGGTTTATATCTTGAAGCTCTGTGACGAGGATACCCACCCGGCTTGCTTAAACTaGCAAAGAACCATTTACAAT | + |
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Preference number: 2 (lower is better) Translates to: PSFHGLVYILKLCDEDTHPACLN*QRTIYN Trigger: ATTGTAAATGGTTCTTTGCCAGTTTAAGCAAGCCGG...GTGGGTATCCTCGTCACAGAGCTTCAAGATATAAACCAGTCCATGAAATGATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
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| 3UTR-3UTR TCA 90 bp | TTGGGGGAGGAATGGACCCAGGTAGCTCATGTCATTAAATGGACAATACATAAACTTCCAGATTGCCACTaGTTCCAAGTTTTCTTTGTT | + |
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Preference number: 2 (lower is better) Translates to: LGEEWTQVAHVIKWTIHKLPDCH*FQVFFV Trigger: AACAAAGAAAACTTGGAATCAGTGGCAATCTGGAAG...TTTATGTATTGTCCATTTAATGACATGAGCTACCTGGGTCCATTCCTCCCCCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
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| 3UTR-3UTR CCA 90 bp | CCATCATTTCATGGACTGGTTTATATCTTGAAGCTCTGTGACGAGGATACCCACTTGTGGCAAAGTATTTaGTCTCCATTTATACACCTG | + |
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Preference number: 2 (lower is better) Translates to: PSFHGLVYILKLCDEDTHLWQSI*SPFIHL Trigger: CAGGTGTATAAATGGAGACCAAATACTTTGCCACAA...GTGGGTATCCTCGTCACAGAGCTTCAAGATATAAACCAGTCCATGAAATGATGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
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| 3UTR CAA 90 bp | CCCCCTGGCTTATTTGAGTTCAAACTCCTTAAGCCATCCATGAGTTaGTGGCAAAGTATTTGGTCTCCATTTATACACCTGTTTTGTTTT | + |
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Preference number: 2 (lower is better) Translates to: PPGLFEFKLLKPSMS*WQSIWSPFIHLFCF Trigger: AAAACAAAACAGGTGTATAAATGGAGACCAAATACTTTGCCACAAACTCATGGATGGCTTAAGGAGTTTGAACTCAAATAAGCCAGGGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
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| 3UTR CAA 90 bp | TCTGTTCTTATATCCCATTCTTTAAAATCCATGCCAAGCATATCATaGTACTGTTGCTTAACAAATACAACCTGCTGCCCCACCCATATG | + |
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Preference number: 2 (lower is better) Translates to: SVLISHSLKSMPSIS*YCCLTNTTCCPTHM Trigger: CATATGGGTGGGGCAGCAGGTTGTATTTGTTAAGCAACAGTACAATGATATGCTTGGCATGGATTTTAAAGAATGGGATATAAGAACAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
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| 3UTR-3UTR GCA 90 bp | AGAACCCTTAAAATAGCAGTCAGTGCATTCAGAAGGAGAGACAAATCATACAAAAACATTTCACCGGCTTaGTTAAACTGGCAAAGAACC | + |
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Preference number: 2 (lower is better) Translates to: RTLKIAVSAFRRRDKSYKNISPA*LNWQRT Trigger: GGTTCTTTGCCAGTTTAAGCAAGCCGGTGAAATGTT...TTTGTATGATTTGTCTCTCCTTCTGAATGCACTGACTGCTATTTTAAGGGTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
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| 3UTR-3UTR GCA 90 bp | CTTAGTGAATTCAAGGACAGCTCCTCAGATAAGTGTACAATTTCAAAGAAATTCGTGTGTTTTCAATCATaGTGGCTTCTAGACCCGTCT | + |
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Preference number: 2 (lower is better) Translates to: LSEFKDSSSDKCTISKKFVCFQS*WLLDPS Trigger: AGACGGGTCTAGAAGCCAGCATGATTGAAAACACAC...GAATTTCTTTGAAATTGTACACTTATCTGAGGAGCTGTCCTTGAATTCACTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
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| 3UTR-3UTR GCA 90 bp | TTGGGGGAGGAATGGACCCAGGTAGCTCATGTCATTAAATGGACAATACATAAATTGGAAAAACAGATCTaGAGTGTGTTTTCAATCATG | + |
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Preference number: 2 (lower is better) Translates to: LGEEWTQVAHVIKWTIHKLEKQI*SVFSIM Trigger: CATGATTGAAAACACACTGCAGATCTGTTTTTCCAA...TTTATGTATTGTCCATTTAATGACATGAGCTACCTGGGTCCATTCCTCCCCCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
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| 3UTR-3UTR CCA 90 bp | ACAGGTCAACATTTCACCGGCTTGCTTAAACTGGCAAAGAACCATTTACAATTACTGTCACAAACATCATaGTCGTCATCGTTGTCATTA | + |
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Preference number: 2 (lower is better) Translates to: TGQHFTGLLKLAKNHLQLLSQTS*SSSLSL Trigger: TAATGACAACGATGACGACCATGATGTTTGTGACAG...TAATTGTAAATGGTTCTTTGCCAGTTTAAGCAAGCCGGTGAAATGTTGACCTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
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| 3UTR-3UTR CCA 90 bp | AGAACCCTTAAAATAGCAGTCAGTGCATTCAGAAGGAGAGACAAATCATACAAAAAGGCTGAAACACTGTaGAGCTCAAACCTAGCTTTT | + |
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Preference number: 2 (lower is better) Translates to: RTLKIAVSAFRRRDKSYKKAETL*SSNLAF Trigger: AAAAGCTAGGTTTGAGCTCCACAGTGTTTCAGCCTT...TTTGTATGATTTGTCTCTCCTTCTGAATGCACTGACTGCTATTTTAAGGGTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
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| 3UTR-3UTR TCA 90 bp | CTTAGTGAATTCAAGGACAGCTCCTCAGATAAGTGTACAATTTCAAAGAAATTCTGTTTGCTGGGGCTTTaGTTTTTCCACAGAAGACTT | + |
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Preference number: 2 (lower is better) Translates to: LSEFKDSSSDKCTISKKFCLLGL*FFHRRL Trigger: AAGTCTTCTGTGGAAAAATCAAAGCCCCAGCAAACA...GAATTTCTTTGAAATTGTACACTTATCTGAGGAGCTGTCCTTGAATTCACTAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
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| 3UTR-3UTR GCA 90 bp | AGAACCCTTAAAATAGCAGTCAGTGCATTCAGAAGGAGAGACAAATCATACAAAGTCTGTCTTCTGGCTTaGAAATTTCGTTCTTCATCT | + |
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Preference number: 2 (lower is better) Translates to: RTLKIAVSAFRRRDKSYKVCLLA*KFRSSS Trigger: AGATGAAGAACGAAATTTGCAAGCCAGAAGACAGAC...TTTGTATGATTTGTCTCTCCTTCTGAATGCACTGACTGCTATTTTAAGGGTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
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| 3UTR-3UTR CCA 90 bp | TACATATACCAAGACAAAGGAAAAACCTGTATTGTAGATCAACAGCCACTTCACCTGTCACAAACATCATaGTCGTCATCGTTGTCATTA | + |
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Preference number: 2 (lower is better) Translates to: YIYQDKGKTCIVDQQPLHLSQTS*SSSLSL Trigger: TAATGACAACGATGACGACCATGATGTTTGTGACAG...GTGAAGTGGCTGTTGATCTACAATACAGGTTTTTCCTTTGTCTTGGTATATGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
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| 3UTR-3UTR CCA 90 bp | ATCAACAGCCACTTCACGGTCAAAAGTCTGACAATACATATCAAAACAGGTCAATTGTGGCAAAGTATTTaGTCTCCATTTATACACCTG | + |
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Preference number: 2 (lower is better) Translates to: INSHFTVKSLTIHIKTGQLWQSI*SPFIHL Trigger: CAGGTGTATAAATGGAGACCAAATACTTTGCCACAA...TTGACCTGTTTTGATATGTATTGTCAGACTTTTGACCGTGAAGTGGCTGTTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
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| 3UTR TCA 72 bp | AGAGAGCAATACAGAGGAACCAGGAGAGGCGTGGGGTaGAATGCGGGCTGGAAACAATACGTACAACTCCAC | + |
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Preference number: 3 (lower is better) Translates to: REQYRGTRRGVG*NAGWKQYVQLH Trigger: GTGGAGTTGTACGTATTGTTTCCAGCCCGCATTTCACCCCACGCCTCTCCTGGTTCCTCTGTATTGCTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
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| 3UTR GCA 72 bp | GCAATACAGAGGAACCAGGAGAGGCGTGGGGTGAAATaGGGGCTGGAAACAATACGTACAACTCCACTGAAC | + |
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Preference number: 3 (lower is better) Translates to: AIQRNQERRGVK*GLETIRTTPLN Trigger: GTTCAGTGGAGTTGTACGTATTGTTTCCAGCCCGCATTTCACCCCACGCCTCTCCTGGTTCCTCTGTATTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
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| 3UTR GCA 72 bp | GTGTTGCACCCGACACGGGGGCCATTCACTAGCAGTTaGTCTCTGTCTGTCTTCTGGCTTGCAAATTTCGTT | + |
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Preference number: 3 (lower is better) Translates to: VLHPTRGPFTSS*SLSVFWLANFV Trigger: AACGAAATTTGCAAGCCAGAAGACAGACAGAGAGCAACTGCTAGTGAATGGCCCCCGTGTCGGGTGCAACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
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| 3UTR GCA 72 bp | CATATGGCGTCCATGAAGCTTCGGCAGACACGTGTTTaGTGGGGCTTTGATTTTTCCACAGAAGACTTGCTT | + |
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Preference number: 3 (lower is better) Translates to: HMASMKLRQTRV*WGFDFSTEDLL Trigger: AAGCAAGTCTTCTGTGGAAAAATCAAAGCCCCAGCAAACACGTGTCTGCCGAAGCTTCATGGACGCCATATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
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| 3UTR GCA 72 bp | ATATCATTGTACTGTTGCTTAACAAATACAACCTGCTaGCCCACCCATATGCTAACACCCCTCTCCCCTCCC | + |
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Preference number: 3 (lower is better) Translates to: ISLYCCLTNTTC*PTHMLTPLSPP Trigger: GGGAGGGGAGAGGGGTGTTAGCATATGGGTGGGGCAGCAGGTTGTATTTGTTAAGCAACAGTACAATGATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
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| 3UTR CCA 72 bp | ATGGCGTCCATGAAGCTTCGGCAGACACGTGTTTGCTaGGGCTTTGATTTTTCCACAGAAGACTTGCTTAGT | + |
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Preference number: 3 (lower is better) Translates to: MASMKLRQTRVC*GFDFSTEDLLS Trigger: ACTAAGCAAGTCTTCTGTGGAAAAATCAAAGCCCCAGCAAACACGTGTCTGCCGAAGCTTCATGGACGCCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
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| 3UTR-3UTR CAA 90 bp | CCGCTCCCGTGGCAATATTTACTAACGGGAAAGAAGACCTGTAGAACCCACAGATCAAAGAAATTCTCCTaGCATTCACACCTCAGTGGG | + |
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Preference number: 3 (lower is better) Translates to: PLPWQYLLTGKKTCRTHRSKKFS*HSHLSG Trigger: CCCACTGAGGTGTGAATGCAAGGAGAATTTCTTTGA...TCTGTGGGTTCTACAGGTCTTCTTTCCCGTTAGTAAATATTGCCACGGGAGCGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
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| 3UTR CCA 72 bp | AATTTCAAAGAAATTCTCCTTGCATTCACACCTCAGTaGGCGGCCCTTCGGGTGAGACCACAAATAGTCCAT | + |
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Preference number: 3 (lower is better) Translates to: NFKEILLAFTPQ*AALRVRPQIVH Trigger: ATGGACTATTTGTGGTCTCACCCGAAGGGCCGCCCACTGAGGTGTGAATGCAAGGAGAATTTCTTTGAAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
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| 3UTR-3UTR CAA 90 bp | CCATCATTTCATGGACTGGTTTATATCTTGAAGCTCTGTGACGAGGATACCCACGATTCCAAGTTTTCTTaGTTAACAGGCCTTCTGGGC | + |
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Preference number: 3 (lower is better) Translates to: PSFHGLVYILKLCDEDTHDSKFS*LTGLLG Trigger: GCCCAGAAGGCCTGTTAACAAAGAAAACTTGGAATC...GTGGGTATCCTCGTCACAGAGCTTCAAGATATAAACCAGTCCATGAAATGATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
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| 3UTR-3UTR CAA 90 bp | CCATCATTTCATGGACTGGTTTATATCTTGAAGCTCTGTGACGAGGATACCCACTTGAACTGTCTGCTTTaGAACGGCAAAGAGAGTCCA | + |
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Preference number: 3 (lower is better) Translates to: PSFHGLVYILKLCDEDTHLNCLL*NGKESP Trigger: TGGACTCTCTTTGCCGTTCAAAAGCAGACAGTTCAA...GTGGGTATCCTCGTCACAGAGCTTCAAGATATAAACCAGTCCATGAAATGATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
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| 3UTR CCA 72 bp | GGGCCATTCACTAGCAGTTGCTCTCTGTCTGTCTTCTaGCTTGCAAATTTCGTTCTTCATCTTAGTGAATTC | + |
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Preference number: 3 (lower is better) Translates to: GPFTSSCSLSVF*LANFVLHLSEF Trigger: GAATTCACTAAGATGAAGAACGAAATTTGCAAGCCAGAAGACAGACAGAGAGCAACTGCTAGTGAATGGCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
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| 3UTR-3UTR CAA 90 bp | TTGGGGGAGGAATGGACCCAGGTAGCTCATGTCATTAAATGGACAATACATAAAGTGTTTGCTGGGGCTTaGATTTTTCCACAGAAGACT | + |
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Preference number: 3 (lower is better) Translates to: LGEEWTQVAHVIKWTIHKVFAGA*IFPQKT Trigger: AGTCTTCTGTGGAAAAATCAAAGCCCCAGCAAACAC...TTTATGTATTGTCCATTTAATGACATGAGCTACCTGGGTCCATTCCTCCCCCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
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| 3UTR-3UTR CAA 90 bp | ATCAACAGCCACTTCACGGTCAAAAGTCTGACAATACATATCAAAACAGGTCAAGTGTTTGCTGGGGCTTaGATTTTTCCACAGAAGACT | + |
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Preference number: 3 (lower is better) Translates to: INSHFTVKSLTIHIKTGQVFAGA*IFPQKT Trigger: AGTCTTCTGTGGAAAAATCAAAGCCCCAGCAAACAC...TTGACCTGTTTTGATATGTATTGTCAGACTTTTGACCGTGAAGTGGCTGTTGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
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| 3UTR-3UTR CAA 90 bp | ACAGGTCAACATTTCACCGGCTTGCTTAAACTGGCAAAGAACCATTTACAATTAGATTCCAAGTTTTCTTaGTTAACAGGCCTTCTGGGC | + |
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Preference number: 3 (lower is better) Translates to: TGQHFTGLLKLAKNHLQLDSKFS*LTGLLG Trigger: GCCCAGAAGGCCTGTTAACAAAGAAAACTTGGAATC...TAATTGTAAATGGTTCTTTGCCAGTTTAAGCAAGCCGGTGAAATGTTGACCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
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| 3UTR-3UTR CAA 90 bp | GTGTGTTTTCAATCATGCTGGCTTCTAGACCCGTCTATTTTAATAGTATCCATGAAGCCATCCATGAGTTaGTGGCAAAGTATTTGGTCT | + |
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Preference number: 3 (lower is better) Translates to: VCFQSCWLLDPSILIVSMKPSMS*WQSIWS Trigger: AGACCAAATACTTTGCCACAAACTCATGGATGGCTT...CATGGATACTATTAAAATAGACGGGTCTAGAAGCCAGCATGATTGAAAACACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
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| 3UTR-3UTR CAA 90 bp | AGAACCCTTAAAATAGCAGTCAGTGCATTCAGAAGGAGAGACAAATCATACAAATTCCCCCTGGCTTATTaGAGTTCAAACTCCTTAAGC | + |
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Preference number: 3 (lower is better) Translates to: RTLKIAVSAFRRRDKSYKFPLAY*SSNSLS Trigger: GCTTAAGGAGTTTGAACTCAAATAAGCCAGGGGGAA...TTTGTATGATTTGTCTCTCCTTCTGAATGCACTGACTGCTATTTTAAGGGTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
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| 3UTR CCA 72 bp | CTCCTTAAGCCATCCATGAGTTTGTGGCAAAGTATTTaGTCTCCATTTATACACCTGTTTTGTTTTCCAAGG | + |
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Preference number: 3 (lower is better) Translates to: LLKPSMSLWQSI*SPFIHLFCFPR Trigger: CCTTGGAAAACAAAACAGGTGTATAAATGGAGACCAAATACTTTGCCACAAACTCATGGATGGCTTAAGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
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| 3UTR TCA 72 bp | CTGGCTTATTTGAGTTCAAACTCCTTAAGCCATCCATaGGTTTGTGGCAAAGTATTTGGTCTCCATTTATAC | + |
|
Preference number: 3 (lower is better) Translates to: LAYLSSNSLSHP*VCGKVFGLHLY Trigger: GTATAAATGGAGACCAAATACTTTGCCACAAACTCATGGATGGCTTAAGGAGTTTGAACTCAAATAAGCCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGTCAACATTTCACCGGCTTGCTTAAACTGGCAAAGAACCATTTACAATTATTTGTGGCAAAGTATTaGGTCTCCATTTATACACCT | + |
|
Preference number: 3 (lower is better) Translates to: TGQHFTGLLKLAKNHLQLFVAKY*VSIYTP Trigger: AGGTGTATAAATGGAGACCAAATACTTTGCCACAAA...TAATTGTAAATGGTTCTTTGCCAGTTTAAGCAAGCCGGTGAAATGTTGACCTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGTCAACATTTCACCGGCTTGCTTAAACTGGCAAAGAACCATTTACAATTATTTTCCACAGAAGACTaGCTTAGTCCTATAACAACT | + |
|
Preference number: 3 (lower is better) Translates to: TGQHFTGLLKLAKNHLQLFSTED*LSPITT Trigger: AGTTGTTATAGGACTAAGCAAGTCTTCTGTGGAAAA...TAATTGTAAATGGTTCTTTGCCAGTTTAAGCAAGCCGGTGAAATGTTGACCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| 3UTR CCA 72 bp | TTTGAGTTCAAACTCCTTAAGCCATCCATGAGTTTGTaGCAAAGTATTTGGTCTCCATTTATACACCTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: FEFKLLKPSMSL*QSIWSPFIHLF Trigger: AAACAGGTGTATAAATGGAGACCAAATACTTTGCCACAAACTCATGGATGGCTTAAGGAGTTTGAACTCAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAACCCTTAAAATAGCAGTCAGTGCATTCAGAAGGAGAGACAAATCATACAAATTTGTGGCAAAGTATTaGGTCTCCATTTATACACCT | + |
|
Preference number: 3 (lower is better) Translates to: RTLKIAVSAFRRRDKSYKFVAKY*VSIYTP Trigger: AGGTGTATAAATGGAGACCAAATACTTTGCCACAAA...TTTGTATGATTTGTCTCTCCTTCTGAATGCACTGACTGCTATTTTAAGGGTTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
||
| 3UTR-3UTR CAA 90 bp | CTTAGTGAATTCAAGGACAGCTCCTCAGATAAGTGTACAATTTCAAAGAAATTCAAAAAGGTGCTTCCTTaGAACTGTCTGCTTTTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: LSEFKDSSSDKCTISKKFKKVLP*NCLLLN Trigger: GTTCAAAAGCAGACAGTTCAAAGGAAGCACCTTTTT...GAATTTCTTTGAAATTGTACACTTATCTGAGGAGCTGTCCTTGAATTCACTAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
||
| CDS-3UTR CCA 90 bp | CCGCTCCCGTGGCAATATTTACTAACGGGAAAGAAGACCTGTAGAACCCACAGAGCTGCTCGGCCACTCTaGCTTTGGGGTTTTGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PLPWQYLLTGKKTCRTHRAARPL*LWGFAS Trigger: GCTTGCAAAACCCCAAAGCCAGAGTGGCCGAGCAGC...TCTGTGGGTTCTACAGGTCTTCTTTCCCGTTAGTAAATATTGCCACGGGAGCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
||
| CDS-3UTR GCA 90 bp | TTTTTAAACACTGATGAATCAAAACTCCCTCCCTCCTGTCACAAACATCATGGTGCGCTCGCAGGCGGCTaGCCTCCGGCTTGCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FLNTDESKLPPSCHKHHGALAGG*PPACLL Trigger: GAGAAGGCAAGCCGGAGGGCAGCCGCCTGCGAGCGC...ACCATGATGTTTGTGACAGGAGGGAGGGAGTTTTGATTCATCAGTGTTTAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS-3UTR GCA 90 bp | ACAGGTCAACATTTCACCGGCTTGCTTAAACTGGCAAAGAACCATTTACAATTAGCGCTCGCAGGCGGCTaGCCTCCGGCTTGCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TGQHFTGLLKLAKNHLQLALAGG*PPACLL Trigger: GAGAAGGCAAGCCGGAGGGCAGCCGCCTGCGAGCGC...TAATTGTAAATGGTTCTTTGCCAGTTTAAGCAAGCCGGTGAAATGTTGACCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS-3UTR CCA 90 bp | GAGTTCAAACTCCTTAAGCCATCCATGAGTTTGTGGCAAAGTATTTGGTCTCCAGGATCTGCCCGCGGATaGCCTCGATCCTCTTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: EFKLLKPSMSLWQSIWSPGSARG*PRSSCA Trigger: TGCGCAAGAGGATCGAGGCCATCCGCGGGCAGATCC...TGGAGACCAAATACTTTGCCACAAACTCATGGATGGCTTAAGGAGTTTGAACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS-3UTR TCA 90 bp | GAGTTCAAACTCCTTAAGCCATCCATGAGTTTGTGGCAAAGTATTTGGTCTCCACCGGCTGGACTGTTGTaGCTCCAGTCTGTAGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: EFKLLKPSMSLWQSIWSPPAGLL*LQSVGG Trigger: CCCTCCTACAGACTGGAGTCACAACAGTCCAGCCGG...TGGAGACCAAATACTTTGCCACAAACTCATGGATGGCTTAAGGAGTTTGAACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS-3UTR CCA 90 bp | ATCAACAGCCACTTCACGGTCAAAAGTCTGACAATACATATCAAAACAGGTCAAGGATCTGCCCGCGGATaGCCTCGATCCTCTTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: INSHFTVKSLTIHIKTGQGSARG*PRSSCA Trigger: TGCGCAAGAGGATCGAGGCCATCCGCGGGCAGATCC...TTGACCTGTTTTGATATGTATTGTCAGACTTTTGACCGTGAAGTGGCTGTTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS-3UTR TCA 90 bp | CCATCATTTCATGGACTGGTTTATATCTTGAAGCTCTGTGACGAGGATACCCACCTCTTGCGCATAAACTaGTCCATGTCGAGGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSFHGLVYILKLCDEDTHLLRIN*SMSRVL Trigger: CAGCACCCTCGACATGGATCAGTTTATGCGCAAGAG...GTGGGTATCCTCGTCACAGAGCTTCAAGATATAAACCAGTCCATGAAATGATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
||
| CDS-3UTR CCA 90 bp | GTGGTTGTTGTTGCTGTAATCTCAGATGCCAGTTTTAACAAACAGAACACAAGCGCTTCTTCCGCCGGCTaGACTGTTGTGACTCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VVVVAVISDASFNKQNTSASSAG*TVVTPV Trigger: GACTGGAGTCACAACAGTCCAGCCGGCGGAAGAAGC...GCTTGTGTTCTGTTTGTTAAAACTGGCATCTGAGATTACAGCAACAACAACCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS-3UTR TCA 90 bp | GTGGTTGTTGTTGCTGTAATCTCAGATGCCAGTTTTAACAAACAGAACACAAGCGCAAGCGGAAGACCCTaGACTCTGCCTTCACCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VVVVAVISDASFNKQNTSASGRP*TLPSPD Trigger: ATCTGGTGAAGGCAGAGTTCAGGGTCTTCCGCTTGC...GCTTGTGTTCTGTTTGTTAAAACTGGCATCTGAGATTACAGCAACAACAACCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS-3UTR GCA 90 bp | GAGTTCAAACTCCTTAAGCCATCCATGAGTTTGTGGCAAAGTATTTGGTCTCCACTGGCTTTGGGGTTTTaGAAGCGGAAGACCCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: EFKLLKPSMSLWQSIWSPLALGF*KRKTLN Trigger: GTTCAGGGTCTTCCGCTTGCAAAACCCCAAAGCCAG...TGGAGACCAAATACTTTGCCACAAACTCATGGATGGCTTAAGGAGTTTGAACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS-3UTR CCA 90 bp | ACAGGTCAACATTTCACCGGCTTGCTTAAACTGGCAAAGAACCATTTACAATTAGCTTCTTCCGCCGGCTaGACTGTTGTGACTCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TGQHFTGLLKLAKNHLQLASSAG*TVVTPV Trigger: GACTGGAGTCACAACAGTCCAGCCGGCGGAAGAAGC...TAATTGTAAATGGTTCTTTGCCAGTTTAAGCAAGCCGGTGAAATGTTGACCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS-3UTR CCA 90 bp | CCGCTCCCGTGGCAATATTTACTAACGGGAAAGAAGACCTGTAGAACCCACAGATACCCTTTGGGTTCATaGATCCATTTCCATCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PLPWQYLLTGKKTCRTHRYPLGS*IHFHPR Trigger: TCTTGGATGGAAATGGATCCATGAACCCAAAGGGTA...TCTGTGGGTTCTACAGGTCTTCTTTCCCGTTAGTAAATATTGCCACGGGAGCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
||
| CDS-3UTR TCA 90 bp | ACAGGTCAACATTTCACCGGCTTGCTTAAACTGGCAAAGAACCATTTACAATTAGCAAGCGGAAGACCCTaGACTCTGCCTTCACCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TGQHFTGLLKLAKNHLQLASGRP*TLPSPD Trigger: ATCTGGTGAAGGCAGAGTTCAGGGTCTTCCGCTTGC...TAATTGTAAATGGTTCTTTGCCAGTTTAAGCAAGCCGGTGAAATGTTGACCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS-3UTR TCA 90 bp | TTTTTAAACACTGATGAATCAAAACTCCCTCCCTCCTGTCACAAACATCATGGTTTCCTGTCTTTGTGGTaGAGCCACTCCTGCACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: FLNTDESKLPPSCHKHHGFLSLW*SHSCTA Trigger: CGCTGTGCAGGAGTGGCTTCACCACAAAGACAGGAA...ACCATGATGTTTGTGACAGGAGGGAGGGAGTTTTGATTCATCAGTGTTTAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS-3UTR GCA 90 bp | TTGGGGGAGGAATGGACCCAGGTAGCTCATGTCATTAAATGGACAATACATAAAGAAGACCCTGAACTCTaGCTTCACCAGATTCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LGEEWTQVAHVIKWTIHKEDPEL*LHQIRS Trigger: GCTTCGAATCTGGTGAAGGCAGAGTTCAGGGTCTTC...TTTATGTATTGTCCATTTAATGACATGAGCTACCTGGGTCCATTCCTCCCCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
||
| CDS-3UTR GCA 90 bp | TTTTTAAACACTGATGAATCAAAACTCCCTCCCTCCTGTCACAAACATCATGGTGTCTGGAGCAAAAGCTaGCCAATGAGCCAGAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FLNTDESKLPPSCHKHHGVWSKS*PMSQRV Trigger: CACCCTCTGGCTCATTGGGCAGCTTTTGCTCCAGAC...ACCATGATGTTTGTGACAGGAGGGAGGGAGTTTTGATTCATCAGTGTTTAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000195201.2 |
||
| CDS-3UTR CCA 90 bp | TACATATACCAAGACAAAGGAAAAACCTGTATTGTAGATCAACAGCCACTTCACGCTGCTCGGCCACTCTaGCTTTGGGGTTTTGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: YIYQDKGKTCIVDQQPLHAARPL*LWGFAS Trigger: GCTTGCAAAACCCCAAAGCCAGAGTGGCCGAGCAGC...GTGAAGTGGCTGTTGATCTACAATACAGGTTTTTCCTTTGTCTTGGTATATGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS-3UTR CCA 90 bp | CCGCTCCCGTGGCAATATTTACTAACGGGAAAGAAGACCTGTAGAACCCACAGACAATGTAATAGAGAATaGTCAGTGGTTCCAGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: PLPWQYLLTGKKTCRTHRQCNRE*SVVPDP Trigger: AGGATCTGGAACCACTGACCATTCTCTATTACATTG...TCTGTGGGTTCTACAGGTCTTCTTTCCCGTTAGTAAATATTGCCACGGGAGCGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
||
| 3UTR CAA 72 bp | CCCTCCCTCCTGTCACAAACATCATGGTCGTCATCGTaGTCATTATATGTCATTGTCACCGTGATTTTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: PSLLSQTSWSSS*SLYVIVTVIFV Trigger: CACGAAAATCACGGTGACAATGACATATAATGACAACGATGACGACCATGATGTTTGTGACAGGAGGGAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS-3UTR TCA 90 bp | GTGTGTTTTCAATCATGCTGGCTTCTAGACCCGTCTATTTTAATAGTATCCATGCTCTTGCGCATAAACTaGTCCATGTCGAGGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VCFQSCWLLDPSILIVSMLLRIN*SMSRVL Trigger: CAGCACCCTCGACATGGATCAGTTTATGCGCAAGAG...CATGGATACTATTAAAATAGACGGGTCTAGAAGCCAGCATGATTGAAAACACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS-3UTR TCA 90 bp | TACATATACCAAGACAAAGGAAAAACCTGTATTGTAGATCAACAGCCACTTCACTTCCTGTCTTTGTGGTaGAGCCACTCCTGCACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: YIYQDKGKTCIVDQQPLHFLSLW*SHSCTA Trigger: CGCTGTGCAGGAGTGGCTTCACCACAAAGACAGGAA...GTGAAGTGGCTGTTGATCTACAATACAGGTTTTTCCTTTGTCTTGGTATATGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS-3UTR GCA 90 bp | GAGTTCAAACTCCTTAAGCCATCCATGAGTTTGTGGCAAAGTATTTGGTCTCCATGGTTTTCACAACCTTaGTATCGATGTAGCGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: EFKLLKPSMSLWQSIWSPWFSQP*YRCSAG Trigger: CCCAGCGCTACATCGATAGCAAGGTTGTGAAAACCA...TGGAGACCAAATACTTTGCCACAAACTCATGGATGGCTTAAGGAGTTTGAACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS-3UTR CCA 90 bp | ACAGGTCAACATTTCACCGGCTTGCTTAAACTGGCAAAGAACCATTTACAATTAAGGGTCTGTAGAAAGTaGGCGGGATGGCATTTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: TGQHFTGLLKLAKNHLQLRVCRK*AGWHFR Trigger: CCGAAAATGCCATCCCGCCCACTTTCTACAGACCCT...TAATTGTAAATGGTTCTTTGCCAGTTTAAGCAAGCCGGTGAAATGTTGACCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
||
| CDS-3UTR CCA 90 bp | CCATCATTTCATGGACTGGTTTATATCTTGAAGCTCTGTGACGAGGATACCCACATTCACCCTCCGCTCTaGTTTTCACAACCTTGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: PSFHGLVYILKLCDEDTHIHPPL*FSQPCY Trigger: ATAGCAAGGTTGTGAAAACCAGAGCGGAGGGTGAAT...GTGGGTATCCTCGTCACAGAGCTTCAAGATATAAACCAGTCCATGAAATGATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
||
| CDS-3UTR CCA 90 bp | ATCAACAGCCACTTCACGGTCAAAAGTCTGACAATACATATCAAAACAGGTCAAAGTGGTTCCAGATCCTaGGACACACAGCAAGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: INSHFTVKSLTIHIKTGQSGSRS*DTQQGE Trigger: TTCCCCTTGCTGTGTGTCCCAGGATCTGGAACCACT...TTGACCTGTTTTGATATGTATTGTCAGACTTTTGACCGTGAAGTGGCTGTTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS-3UTR CCA 90 bp | GAGTTCAAACTCCTTAAGCCATCCATGAGTTTGTGGCAAAGTATTTGGTCTCCAATAGAGAATGGTCAGTaGTTCCAGATCCTGGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: EFKLLKPSMSLWQSIWSPIENGQ*FQILGH Trigger: GTGTCCCAGGATCTGGAACCACTGACCATTCTCTAT...TGGAGACCAAATACTTTGCCACAAACTCATGGATGGCTTAAGGAGTTTGAACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS-3UTR CCA 90 bp | TTTTTAAACACTGATGAATCAAAACTCCCTCCCTCCTGTCACAAACATCATGGTGGGTGTTGTAACAACTaGGCAGACAGTTTCGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FLNTDESKLPPSCHKHHGGCCNN*ADSFGG Trigger: CCCTCCGAAACTGTCTGCCCAGTTGTTACAACACCC...ACCATGATGTTTGTGACAGGAGGGAGGGAGTTTTGATTCATCAGTGTTTAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195201.2 |
||
| CDS-3UTR CCA 90 bp | ACAGGTCAACATTTCACCGGCTTGCTTAAACTGGCAAAGAACCATTTACAATTATACCCACAGAGCACCTaGGACTGTCTGGAGCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TGQHFTGLLKLAKNHLQLYPQST*DCLEQK Trigger: CTTTTGCTCCAGACAGTCCCAGGTGCTCTGTGGGTA...TAATTGTAAATGGTTCTTTGCCAGTTTAAGCAAGCCGGTGAAATGTTGACCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195201.2 |
||
| CDS-3UTR CCA 90 bp | GTGTGTTTTCAATCATGCTGGCTTCTAGACCCGTCTATTTTAATAGTATCCATGAGAAAGTGGGCGGGATaGCATCAAGGTACCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: VCFQSCWLLDPSILIVSMRKWAG*HQGTHR Trigger: TCTGTGGGTACCTTGATGCCATCCCGCCCACTTTCT...CATGGATACTATTAAAATAGACGGGTCTAGAAGCCAGCATGATTGAAAACACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195201.2 |
||
| CDS-3UTR TCA 90 bp | TACATATACCAAGACAAAGGAAAAACCTGTATTGTAGATCAACAGCCACTTCACGCAAAAGCTGCCCAATaGGCCAGAGGGTGTTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: YIYQDKGKTCIVDQQPLHAKAAQ*ARGCCN Trigger: GTTACAACACCCTCTGGCTCATTGGGCAGCTTTTGC...GTGAAGTGGCTGTTGATCTACAATACAGGTTTTTCCTTTGTCTTGGTATATGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195201.2 |
||
| CDS-3UTR CCA 90 bp | GTGTGTTTTCAATCATGCTGGCTTCTAGACCCGTCTATTTTAATAGTATCCATGCGATGTAGCGCTGGGTaGGAGATGTTAAGTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VCFQSCWLLDPSILIVSMRCSAG*EMLSLW Trigger: CCAAAGACTTAACATCTCCCACCCAGCGCTACATCG...CATGGATACTATTAAAATAGACGGGTCTAGAAGCCAGCATGATTGAAAACACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS-3UTR CCA 90 bp | TACATATACCAAGACAAAGGAAAAACCTGTATTGTAGATCAACAGCCACTTCACAGTGGTTCCAGATCCTaGGACACACAGCAAGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: YIYQDKGKTCIVDQQPLHSGSRS*DTQQGE Trigger: TTCCCCTTGCTGTGTGTCCCAGGATCTGGAACCACT...GTGAAGTGGCTGTTGATCTACAATACAGGTTTTTCCTTTGTCTTGGTATATGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS-3UTR CCA 90 bp | TACATATACCAAGACAAAGGAAAAACCTGTATTGTAGATCAACAGCCACTTCACGTTTCGGAGGGGAGGTaGGACGGCATGTCGATTTTA | + |
|
Preference number: 4 (lower is better) Translates to: YIYQDKGKTCIVDQQPLHVSEGR*DGMSIL Trigger: TAAAATCGACATGCCGTCCCACCTCCCCTCCGAAAC...GTGAAGTGGCTGTTGATCTACAATACAGGTTTTTCCTTTGTCTTGGTATATGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000195201.2 |
||
| CDS-3UTR CCA 90 bp | TACATATACCAAGACAAAGGAAAAACCTGTATTGTAGATCAACAGCCACTTCACAGGGTCTGTAGAAAGTaGGCGGGATGGCATCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: YIYQDKGKTCIVDQQPLHRVCRK*AGWHQG Trigger: ACCTTGATGCCATCCCGCCCACTTTCTACAGACCCT...GTGAAGTGGCTGTTGATCTACAATACAGGTTTTTCCTTTGTCTTGGTATATGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195201.2 |
||
| CDS-3UTR TCA 90 bp | ACAGGTCAACATTTCACCGGCTTGCTTAAACTGGCAAAGAACCATTTACAATTACAAAGCGGACGATTCTaGAGTAGGGTCTGTAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TGQHFTGLLKLAKNHLQLQSGRF*SRVCRK Trigger: CTTTCTACAGACCCTACTTCAGAATCGTCCGCTTTG...TAATTGTAAATGGTTCTTTGCCAGTTTAAGCAAGCCGGTGAAATGTTGACCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS-3UTR TCA 90 bp | GTGGTTGTTGTTGCTGTAATCTCAGATGCCAGTTTTAACAAACAGAACACAAGCAGGACTTTGGTGTGTTaGGTGTCTGAACTCCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: VVVVAVISDASFNKQNTSRTLVC*VSELHR Trigger: TCTATGGAGTTCAGACACTCAACACACCAAAGTCCT...GCTTGTGTTCTGTTTGTTAAAACTGGCATCTGAGATTACAGCAACAACAACCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS-3UTR GCA 90 bp | TACATATACCAAGACAAAGGAAAAACCTGTATTGTAGATCAACAGCCACTTCACGCAGGAGCAAAAAGGTaGTCAGCACACAGTAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: YIYQDKGKTCIVDQQPLHAGAKR*SAHSSA Trigger: TGCACTACTGTGTGCTGAGCACCTTTTTGCTCCTGC...GTGAAGTGGCTGTTGATCTACAATACAGGTTTTTCCTTTGTCTTGGTATATGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS-3UTR GCA 90 bp | CTTAGTGAATTCAAGGACAGCTCCTCAGATAAGTGTACAATTTCAAAGAAATTCCTGGCTTTGGGGTTTTaGAAGCGGAAGACCCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LSEFKDSSSDKCTISKKFLALGF*KRKTLN Trigger: GTTCAGGGTCTTCCGCTTGCAAAACCCCAAAGCCAG...GAATTTCTTTGAAATTGTACACTTATCTGAGGAGCTGTCCTTGAATTCACTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
||
| CDS-3UTR CCA 90 bp | TACATATACCAAGACAAAGGAAAAACCTGTATTGTAGATCAACAGCCACTTCACCGATGTAGCGCTGGGTaGGAGATGTTAAGTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: YIYQDKGKTCIVDQQPLHRCSAG*EMLSLW Trigger: CCAAAGACTTAACATCTCCCACCCAGCGCTACATCG...GTGAAGTGGCTGTTGATCTACAATACAGGTTTTTCCTTTGTCTTGGTATATGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS-3UTR CCA 90 bp | GTGGTTGTTGTTGCTGTAATCTCAGATGCCAGTTTTAACAAACAGAACACAAGCATTCACCCTCCGCTCTaGTTTTCACAACCTTGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: VVVVAVISDASFNKQNTSIHPPL*FSQPCY Trigger: ATAGCAAGGTTGTGAAAACCAGAGCGGAGGGTGAAT...GCTTGTGTTCTGTTTGTTAAAACTGGCATCTGAGATTACAGCAACAACAACCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS-3UTR CCA 90 bp | GAGTTCAAACTCCTTAAGCCATCCATGAGTTTGTGGCAAAGTATTTGGTCTCCATACCCTTTGGGTTCATaGATCCATTTCCATCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: EFKLLKPSMSLWQSIWSPYPLGS*IHFHPR Trigger: TCTTGGATGGAAATGGATCCATGAACCCAAAGGGTA...TGGAGACCAAATACTTTGCCACAAACTCATGGATGGCTTAAGGAGTTTGAACTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS-3UTR CCA 90 bp | TTTTTAAACACTGATGAATCAAAACTCCCTCCCTCCTGTCACAAACATCATGGTATAGAGAATGGTCAGTaGTTCCAGATCCTGGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: FLNTDESKLPPSCHKHHGIENGQ*FQILGH Trigger: GTGTCCCAGGATCTGGAACCACTGACCATTCTCTAT...ACCATGATGTTTGTGACAGGAGGGAGGGAGTTTTGATTCATCAGTGTTTAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| 3UTR CAA 72 bp | CATTCACTAGCAGTTGCTCTCTGTCTGTCTTCTGGCTaGCAAATTTCGTTCTTCATCTTAGTGAATTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: HSLAVALCLSSG*QISFFILVNSR Trigger: CCTTGAATTCACTAAGATGAAGAACGAAATTTGCAAGCCAGAAGACAGACAGAGAGCAACTGCTAGTGAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
||
| CDS-3UTR TCA 90 bp | ATCAACAGCCACTTCACGGTCAAAAGTCTGACAATACATATCAAAACAGGTCAAAGGACTTTGGTGTGTTaGGTGTCTGAACTCCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: INSHFTVKSLTIHIKTGQRTLVC*VSELHR Trigger: TCTATGGAGTTCAGACACTCAACACACCAAAGTCCT...TTGACCTGTTTTGATATGTATTGTCAGACTTTTGACCGTGAAGTGGCTGTTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS-3UTR GCA 90 bp | CTTAGTGAATTCAAGGACAGCTCCTCAGATAAGTGTACAATTTCAAAGAAATTCGCAGGAGCAAAAAGGTaGTCAGCACACAGTAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSEFKDSSSDKCTISKKFAGAKR*SAHSSA Trigger: TGCACTACTGTGTGCTGAGCACCTTTTTGCTCCTGC...GAATTTCTTTGAAATTGTACACTTATCTGAGGAGCTGTCCTTGAATTCACTAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
||
| CDS-3UTR GCA 90 bp | TACATATACCAAGACAAAGGAAAAACCTGTATTGTAGATCAACAGCCACTTCACTGGTTTTCACAACCTTaGTATCGATGTAGCGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: YIYQDKGKTCIVDQQPLHWFSQP*YRCSAG Trigger: CCCAGCGCTACATCGATAGCAAGGTTGTGAAAACCA...GTGAAGTGGCTGTTGATCTACAATACAGGTTTTTCCTTTGTCTTGGTATATGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS-3UTR CCA 90 bp | ATCAACAGCCACTTCACGGTCAAAAGTCTGACAATACATATCAAAACAGGTCAATTTTATAAACCTCCTTaGCGTAGTACTCCTCGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: INSHFTVKSLTIHIKTGQFYKPP*RSTPRR Trigger: GCGACGAGGAGTACTACGCCAAGGAGGTTTATAAAA...TTGACCTGTTTTGATATGTATTGTCAGACTTTTGACCGTGAAGTGGCTGTTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS-3UTR CCA 90 bp | ACAGGTCAACATTTCACCGGCTTGCTTAAACTGGCAAAGAACCATTTACAATTATTTTATAAACCTCCTTaGCGTAGTACTCCTCGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: TGQHFTGLLKLAKNHLQLFYKPP*RSTPRR Trigger: GCGACGAGGAGTACTACGCCAAGGAGGTTTATAAAA...TAATTGTAAATGGTTCTTTGCCAGTTTAAGCAAGCCGGTGAAATGTTGACCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS-3UTR TCA 90 bp | CTTAGTGAATTCAAGGACAGCTCCTCAGATAAGTGTACAATTTCAAAGAAATTCCAAAGCGGACGATTCTaGAGTAGGGTCTGTAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSEFKDSSSDKCTISKKFQSGRF*SRVCRK Trigger: CTTTCTACAGACCCTACTTCAGAATCGTCCGCTTTG...GAATTTCTTTGAAATTGTACACTTATCTGAGGAGCTGTCCTTGAATTCACTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
||
| CDS-3UTR TCA 90 bp | GTGGTTGTTGTTGCTGTAATCTCAGATGCCAGTTTTAACAAACAGAACACAAGCGACTTTATAGTTTTCTaGTCACCACTGGCATATGTA | + |
|
Preference number: 4 (lower is better) Translates to: VVVVAVISDASFNKQNTSDFIVF*SPLAYV Trigger: TACATATGCCAGTGGTGATCAGAAAACTATAAAGTC...GCTTGTGTTCTGTTTGTTAAAACTGGCATCTGAGATTACAGCAACAACAACCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS-3UTR CCA 90 bp | TTTTTAAACACTGATGAATCAAAACTCCCTCCCTCCTGTCACAAACATCATGGTCAATGTAATAGAGAATaGTCAGTGGTTCCAGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: FLNTDESKLPPSCHKHHGQCNRE*SVVPDP Trigger: AGGATCTGGAACCACTGACCATTCTCTATTACATTG...ACCATGATGTTTGTGACAGGAGGGAGGGAGTTTTGATTCATCAGTGTTTAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| 3UTR CAA 72 bp | TTCTTTAAAATCCATGCCAAGCATATCATTGTACTGTaGCTTAACAAATACAACCTGCTGCCCCACCCATAT | + |
|
Preference number: 4 (lower is better) Translates to: FFKIHAKHIIVL*LNKYNLLPHPY Trigger: ATATGGGTGGGGCAGCAGGTTGTATTTGTTAAGCAACAGTACAATGATATGCTTGGCATGGATTTTAAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
||
| 3UTR CAA 72 bp | ATATCCCATTCTTTAAAATCCATGCCAAGCATATCATaGTACTGTTGCTTAACAAATACAACCTGCTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ISHSLKSMPSIS*YCCLTNTTCCP Trigger: GGGGCAGCAGGTTGTATTTGTTAAGCAACAGTACAATGATATGCTTGGCATGGATTTTAAAGAATGGGATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
||
| CDS-3UTR TCA 90 bp | GTGTGTTTTCAATCATGCTGGCTTCTAGACCCGTCTATTTTAATAGTATCCATGGACTTTATAGTTTTCTaGTCACCACTGGCATATGTA | + |
|
Preference number: 4 (lower is better) Translates to: VCFQSCWLLDPSILIVSMDFIVF*SPLAYV Trigger: TACATATGCCAGTGGTGATCAGAAAACTATAAAGTC...CATGGATACTATTAAAATAGACGGGTCTAGAAGCCAGCATGATTGAAAACACAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| 3UTR CAA 72 bp | TTATTTGAGTTCAAACTCCTTAAGCCATCCATGAGTTaGTGGCAAAGTATTTGGTCTCCATTTATACACCTG | + |
|
Preference number: 4 (lower is better) Translates to: LFEFKLLKPSMS*WQSIWSPFIHL Trigger: CAGGTGTATAAATGGAGACCAAATACTTTGCCACAAACTCATGGATGGCTTAAGGAGTTTGAACTCAAATAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS-3UTR TCA 90 bp | CTTAGTGAATTCAAGGACAGCTCCTCAGATAAGTGTACAATTTCAAAGAAATTCATTTTTCTCCATTGTTaGGACATCAAAGCGGACGAT | + |
|
Preference number: 4 (lower is better) Translates to: LSEFKDSSSDKCTISKKFIFLHC*DIKADD Trigger: ATCGTCCGCTTTGATGTCTCAACAATGGAGAAAAAT...GAATTTCTTTGAAATTGTACACTTATCTGAGGAGCTGTCCTTGAATTCACTAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
||
| CDS CCA 90 bp | TTTCGGAGGGGAGGTGGGACGGCATGTCGATTTTATAAACCTCCTTaGCGTAGTACTCCTCGTCGCTCCGCTCGCGCTCGCAGGCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FRRGGGTACRFYKPP*RSTPRRSARARRRL Trigger: CAGCCGCCTGCGAGCGCGAGCGGAGCGACGAGGAGTACTACGCCAAGGAGGTTTATAAAATCGACATGCCGTCCCACCTCCCCTCCGAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS TCA 90 bp | GTACCCACAGAGCACCTGGGACTGTCTGGAGCAAAAGCTGCCCAATaGGCCAGAGGGTGTTGTAACAACTGGGCAGACAGTTTCGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: VPTEHLGLSGAKAAQ*ARGCCNNWADSFGG Trigger: CCCTCCGAAACTGTCTGCCCAGTTGTTACAACACCCTCTGGCTCATTGGGCAGCTTTTGCTCCAGACAGTCCCAGGTGCTCTGTGGGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195201.2 |
||
| CDS CCA 90 bp | GCACAGCGTCTGTCACGTCGAAGGAGAGCCATTCACCCTCCGCTCTaGTTTTCACAACCTTGCTATCGATGTAGCGCTGGGTGGGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: AQRLSRRRRAIHPPL*FSQPCYRCSAGWEM Trigger: CATCTCCCACCCAGCGCTACATCGATAGCAAGGTTGTGAAAACCAGAGCGGAGGGTGAATGGCTCTCCTTCGACGTGACAGACGCTGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS-3UTR CAA 90 bp | CCGCTCCCGTGGCAATATTTACTAACGGGAAAGAAGACCTGTAGAACCCACAGATCGGCCACTCTGGCTTaGGGGTTTTGCAAGCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PLPWQYLLTGKKTCRTHRSATLA*GFCKRK Trigger: CTTCCGCTTGCAAAACCCCAAAGCCAGAGTGGCCGA...TCTGTGGGTTCTACAGGTCTTCTTTCCCGTTAGTAAATATTGCCACGGGAGCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
||
| CDS GCA 90 bp | CGTCGAAGGAGAGCCATTCACCCTCCGCTCTGGTTTTCACAACCTTaGTATCGATGTAGCGCTGGGTGGGAGATGTTAAGTCTTTGGATT | + |
|
Preference number: 5 (lower is better) Translates to: RRRRAIHPPLWFSQP*YRCSAGWEMLSLWI Trigger: AATCCAAAGACTTAACATCTCCCACCCAGCGCTACATCGATAGCAAGGTTGTGAAAACCAGAGCGGAGGGTGAATGGCTCTCCTTCGACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS-3UTR CAA 90 bp | GAGTTCAAACTCCTTAAGCCATCCATGAGTTTGTGGCAAAGTATTTGGTCTCCACTGGTGAGCTTCAGCTaGCTCAGGATCTGCCCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: EFKLLKPSMSLWQSIWSPLVSFS*LRICPR Trigger: CCGCGGGCAGATCCTGAGCAAGCTGAAGCTCACCAG...TGGAGACCAAATACTTTGCCACAAACTCATGGATGGCTTAAGGAGTTTGAACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS CCA 90 bp | CTGTTCGATCTTGGGCGTATTTCCAATGTAATAGAGAATGGTCAGTaGTTCCAGATCCTGGGACACACAGCAAGGGGAAGCGGAAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LFDLGRISNVIENGQ*FQILGHTARGSGSF Trigger: GAAGCTTCCGCTTCCCCTTGCTGTGTGTCCCAGGATCTGGAACCACTGACCATTCTCTATTACATTGGAAATACGCCCAAGATCGAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS CCA 90 bp | TGGAAAGCTGTTCGATCTTGGGCGTATTTCCAATGTAATAGAGAATaGTCAGTGGTTCCAGATCCTGGGACACACAGCAAGGGGAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: WKAVRSWAYFQCNRE*SVVPDPGTHSKGKR Trigger: CCGCTTCCCCTTGCTGTGTGTCCCAGGATCTGGAACCACTGACCATTCTCTATTACATTGGAAATACGCCCAAGATCGAACAGCTTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
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| CDS-3UTR CAA 90 bp | GTGGTTGTTGTTGCTGTAATCTCAGATGCCAGTTTTAACAAACAGAACACAAGCCTGGTGAGCTTCAGCTaGCTCAGGATCTGCCCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: VVVVAVISDASFNKQNTSLVSFS*LRICPR Trigger: CCGCGGGCAGATCCTGAGCAAGCTGAAGCTCACCAG...GCTTGTGTTCTGTTTGTTAAAACTGGCATCTGAGATTACAGCAACAACAACCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
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| CDS-3UTR CAA 90 bp | GTGTGTTTTCAATCATGCTGGCTTCTAGACCCGTCTATTTTAATAGTATCCATGCGGCTGCCCTCCGGCTaGCCTTCTCCTGCAGTAAGT | + |
|
Preference number: 5 (lower is better) Translates to: VCFQSCWLLDPSILIVSMRLPSG*PSPAVS Trigger: ACTTACTGCAGGAGAAGGCAAGCCGGAGGGCAGCCG...CATGGATACTATTAAAATAGACGGGTCTAGAAGCCAGCATGATTGAAAACACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
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| CDS TCA 90 bp | TCGAAGCATTTTTCTCCATTGTTGAGACATCAAAGCGGACGATTCTaGAGTAGGGTCTGTAGAAAGTGGGCGGGATGGCATTTTCGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SKHFSPLLRHQSGRF*SRVCRKWAGWHFRR Trigger: CCTCCGAAAATGCCATCCCGCCCACTTTCTACAGACCCTACTTCAGAATCGTCCGCTTTGATGTCTCAACAATGGAGAAAAATGCTTCGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
||
| CDS TCA 90 bp | TCGAAGCATTTTTCTCCATTGTTGAGACATCAAAGCGGACGATTCTaGAGTAGGGTCTGTAGAAAGTGGGCGGGATGGCATCAAGGTACC | + |
|
Preference number: 5 (lower is better) Translates to: SKHFSPLLRHQSGRF*SRVCRKWAGWHQGT Trigger: GGTACCTTGATGCCATCCCGCCCACTTTCTACAGACCCTACTTCAGAATCGTCCGCTTTGATGTCTCAACAATGGAGAAAAATGCTTCGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195201.2 |
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| CDS-3UTR CAA 90 bp | ACAGGTCAACATTTCACCGGCTTGCTTAAACTGGCAAAGAACCATTTACAATTATCGGCCACTCTGGCTTaGGGGTTTTGCAAGCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TGQHFTGLLKLAKNHLQLSATLA*GFCKRK Trigger: CTTCCGCTTGCAAAACCCCAAAGCCAGAGTGGCCGA...TAATTGTAAATGGTTCTTTGCCAGTTTAAGCAAGCCGGTGAAATGTTGACCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS-3UTR CAA 90 bp | TTGGGGGAGGAATGGACCCAGGTAGCTCATGTCATTAAATGGACAATACATAAATCGGGATTTATGGTGTaGTACAGGCTGAGGACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LGEEWTQVAHVIKWTIHKSGFMV*YRLRTL Trigger: CAAAGTCCTCAGCCTGTACAACACCATAAATCCCGA...TTTATGTATTGTCCATTTAATGACATGAGCTACCTGGGTCCATTCCTCCCCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
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| CDS-3UTR CAA 90 bp | CCATCATTTCATGGACTGGTTTATATCTTGAAGCTCTGTGACGAGGATACCCACTTAGCATTGTACCCTTaGGGTTCATGGATCCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: PSFHGLVYILKLCDEDTHLALYP*GSWIHF Trigger: GAAATGGATCCATGAACCCAAAGGGTACAATGCTAA...GTGGGTATCCTCGTCACAGAGCTTCAAGATATAAACCAGTCCATGAAATGATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
||
| CDS-3UTR CAA 90 bp | TTTTTAAACACTGATGAATCAAAACTCCCTCCCTCCTGTCACAAACATCATGGTTCGGGATTTATGGTGTaGTACAGGCTGAGGACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: FLNTDESKLPPSCHKHHGSGFMV*YRLRTL Trigger: CAAAGTCCTCAGCCTGTACAACACCATAAATCCCGA...ACCATGATGTTTGTGACAGGAGGGAGGGAGTTTTGATTCATCAGTGTTTAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS-3UTR CAA 90 bp | TACATATACCAAGACAAAGGAAAAACCTGTATTGTAGATCAACAGCCACTTCACGCACAGAAGTTAGCATaGTACCCTTTGGGTTCATGG | + |
|
Preference number: 5 (lower is better) Translates to: YIYQDKGKTCIVDQQPLHAQKLA*YPLGSW Trigger: CCATGAACCCAAAGGGTACAATGCTAACTTCTGTGC...GTGAAGTGGCTGTTGATCTACAATACAGGTTTTTCCTTTGTCTTGGTATATGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS-3UTR CAA 90 bp | ACAGGTCAACATTTCACCGGCTTGCTTAAACTGGCAAAGAACCATTTACAATTACATTTTTCTCCATTGTaGAGACATCAAAGCGGACGA | + |
|
Preference number: 5 (lower is better) Translates to: TGQHFTGLLKLAKNHLQLHFSPL*RHQSGR Trigger: TCGTCCGCTTTGATGTCTCAACAATGGAGAAAAATG...TAATTGTAAATGGTTCTTTGCCAGTTTAAGCAAGCCGGTGAAATGTTGACCTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS-3UTR CAA 90 bp | GTGTGTTTTCAATCATGCTGGCTTCTAGACCCGTCTATTTTAATAGTATCCATGTTAGCATTGTACCCTTaGGGTTCATGGATCCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: VCFQSCWLLDPSILIVSMLALYP*GSWIHF Trigger: GAAATGGATCCATGAACCCAAAGGGTACAATGCTAA...CATGGATACTATTAAAATAGACGGGTCTAGAAGCCAGCATGATTGAAAACACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS-3UTR CAA 90 bp | GTGGTTGTTGTTGCTGTAATCTCAGATGCCAGTTTTAACAAACAGAACACAAGCGACTTGACAATCATATaGGAAAGCTGTTCGATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VVVVAVISDASFNKQNTSDLTII*ESCSIL Trigger: CAAGATCGAACAGCTTTCCAATATGATTGTCAAGTC...GCTTGTGTTCTGTTTGTTAAAACTGGCATCTGAGATTACAGCAACAACAACCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS-3UTR CAA 90 bp | ATCAACAGCCACTTCACGGTCAAAAGTCTGACAATACATATCAAAACAGGTCAAAAGCATTTTTCTCCATaGTTGAGACATCAAAGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: INSHFTVKSLTIHIKTGQKHFSP*LRHQSG Trigger: TCCGCTTTGATGTCTCAACAATGGAGAAAAATGCTT...TTGACCTGTTTTGATATGTATTGTCAGACTTTTGACCGTGAAGTGGCTGTTGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS-3UTR CAA 90 bp | GTGTGTTTTCAATCATGCTGGCTTCTAGACCCGTCTATTTTAATAGTATCCATGAAGCATTTTTCTCCATaGTTGAGACATCAAAGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: VCFQSCWLLDPSILIVSMKHFSP*LRHQSG Trigger: TCCGCTTTGATGTCTCAACAATGGAGAAAAATGCTT...CATGGATACTATTAAAATAGACGGGTCTAGAAGCCAGCATGATTGAAAACACAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS-3UTR CAA 90 bp | ACAGGTCAACATTTCACCGGCTTGCTTAAACTGGCAAAGAACCATTTACAATTAGACTTGACAATCATATaGGAAAGCTGTTCGATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TGQHFTGLLKLAKNHLQLDLTII*ESCSIL Trigger: CAAGATCGAACAGCTTTCCAATATGATTGTCAAGTC...TAATTGTAAATGGTTCTTTGCCAGTTTAAGCAAGCCGGTGAAATGTTGACCTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS-3UTR CAA 90 bp | CTTAGTGAATTCAAGGACAGCTCCTCAGATAAGTGTACAATTTCAAAGAAATTCCATTTTTCTCCATTGTaGAGACATCAAAGCGGACGA | + |
|
Preference number: 5 (lower is better) Translates to: LSEFKDSSSDKCTISKKFHFSPL*RHQSGR Trigger: TCGTCCGCTTTGATGTCTCAACAATGGAGAAAAATG...GAATTTCTTTGAAATTGTACACTTATCTGAGGAGCTGTCCTTGAATTCACTAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045288.14 |
||
| CDS CAA 72 bp | CGCTCCGCTCGCGCTCGCAGGCGGCTGCCCTCCGGCTaGCCTTCTCCTGCAGTAAGTCCCTGGTACTGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: RSARARRRLPSG*PSPAVSPWYCC Trigger: ACAACAGTACCAGGGACTTACTGCAGGAGAAGGCAAGCCGGAGGGCAGCCGCCTGCGAGCGCGAGCGGAGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS CAA 90 bp | ACTCCTCGTCGCTCCGCTCGCGCTCGCAGGCGGCTGCCCTCCGGCTaGCCTTCTCCTGCAGTAAGTCCCTGGTACTGTTGTAGATGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: TPRRSARARRRLPSG*PSPAVSPWYCCRWK Trigger: TTTCCATCTACAACAGTACCAGGGACTTACTGCAGGAGAAGGCAAGCCGGAGGGCAGCCGCCTGCGAGCGCGAGCGGAGCGACGAGGAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
||
| CDS CCA 72 bp | GGAGGTGGGACGGCATGTCGATTTTATAAACCTCCTTaGCGTAGTACTCCTCGTCGCTCCGCTCGCGCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: GGGTACRFYKPP*RSTPRRSARAR Trigger: GCGAGCGCGAGCGGAGCGACGAGGAGTACTACGCCAAGGAGGTTTATAAAATCGACATGCCGTCCCACCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
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| CDS CCA 72 bp | GTGGGCGGGATGGCATCAAGGTACCCACAGAGCACCTaGGACTGTCTGGAGCAAAAGCTGCCCAATGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: VGGMASRYPQST*DCLEQKLPNEP Trigger: TGGCTCATTGGGCAGCTTTTGCTCCAGACAGTCCCAGGTGCTCTGTGGGTACCTTGATGCCATCCCGCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195201.2 |
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| CDS CCA 72 bp | AGTAGGCAGCATCCAAAGCGCGCTTCTTCCGCCGGCTaGACTGTTGTGACTCCAGTCTGTAGGAGGGCAACA | + |
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Preference number: 6 (lower is better) Translates to: SRQHPKRASSAG*TVVTPVCRRAT Trigger: TGTTGCCCTCCTACAGACTGGAGTCACAACAGTCCAGCCGGCGGAAGAAGCGCGCTTTGGATGCTGCCTACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
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| CDS GCA 72 bp | TCAATCCGCTGCTCGGCCACTCTGGCTTTGGGGTTTTaGAAGCGGAAGACCCTGAACTCTGCCTTCACCAGA | + |
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Preference number: 6 (lower is better) Translates to: SIRCSATLALGF*KRKTLNSAFTR Trigger: TCTGGTGAAGGCAGAGTTCAGGGTCTTCCGCTTGCAAAACCCCAAAGCCAGAGTGGCCGAGCAGCGGATTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
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| CDS CCA 72 bp | TGGCATCAAGGTACCCACAGAGCACCTGGGACTGTCTaGAGCAAAAGCTGCCCAATGAGCCAGAGGGTGTTG | + |
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Preference number: 6 (lower is better) Translates to: WHQGTHRAPGTV*SKSCPMSQRVL Trigger: CAACACCCTCTGGCTCATTGGGCAGCTTTTGCTCCAGACAGTCCCAGGTGCTCTGTGGGTACCTTGATGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195201.2 |
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| CDS CAA 72 bp | TTCAATCCGCTGCTCGGCCACTCTGGCTTTGGGGTTTaGCAAGCGGAAGACCCTGAACTCTGCCTTCACCAG | + |
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Preference number: 6 (lower is better) Translates to: FNPLLGHSGFGV*QAEDPELCLHQ Trigger: CTGGTGAAGGCAGAGTTCAGGGTCTTCCGCTTGCAAAACCCCAAAGCCAGAGTGGCCGAGCAGCGGATTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
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| CDS TCA 72 bp | GAGCACCTGGGACTGTCTGGAGCAAAAGCTGCCCAATaGGCCAGAGGGTGTTGTAACAACTGGGCAGACAGT | + |
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Preference number: 6 (lower is better) Translates to: EHLGLSGAKAAQ*ARGCCNNWADS Trigger: ACTGTCTGCCCAGTTGTTACAACACCCTCTGGCTCATTGGGCAGCTTTTGCTCCAGACAGTCCCAGGTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195201.2 |
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| CDS CCA 72 bp | CTGTCACGTCGAAGGAGAGCCATTCACCCTCCGCTCTaGTTTTCACAACCTTGCTATCGATGTAGCGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: LSRRRRAIHPPL*FSQPCYRCSAG Trigger: CCCAGCGCTACATCGATAGCAAGGTTGTGAAAACCAGAGCGGAGGGTGAATGGCTCTCCTTCGACGTGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
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| CDS CAA 90 bp | CTGATACAGTTCAATCCGCTGCTCGGCCACTCTGGCTTTGGGGTTTaGCAAGCGGAAGACCCTGAACTCTGCCTTCACCAGATTCGAAGC | + |
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Preference number: 6 (lower is better) Translates to: LIQFNPLLGHSGFGV*QAEDPELCLHQIRS Trigger: GCTTCGAATCTGGTGAAGGCAGAGTTCAGGGTCTTCCGCTTGCAAAACCCCAAAGCCAGAGTGGCCGAGCAGCGGATTGAACTGTATCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
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| CDS GCA 72 bp | AGAGCCATTCACCCTCCGCTCTGGTTTTCACAACCTTaGTATCGATGTAGCGCTGGGTGGGAGATGTTAAGT | + |
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Preference number: 6 (lower is better) Translates to: RAIHPPLWFSQP*YRCSAGWEMLS Trigger: ACTTAACATCTCCCACCCAGCGCTACATCGATAGCAAGGTTGTGAAAACCAGAGCGGAGGGTGAATGGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
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| CDS CAA 72 bp | GGGCATGCCCCAGCACAGAAGTTAGCATTGTACCCTTaGGGTTCATGGATCCATTTCCATCCAAGATCCCTC | + |
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Preference number: 6 (lower is better) Translates to: GHAPAQKLALYP*GSWIHFHPRSL Trigger: GAGGGATCTTGGATGGAAATGGATCCATGAACCCAAAGGGTACAATGCTAACTTCTGTGCTGGGGCATGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
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| CDS CCA 72 bp | CTTGGGCGTATTTCCAATGTAATAGAGAATGGTCAGTaGTTCCAGATCCTGGGACACACAGCAAGGGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: LGRISNVIENGQ*FQILGHTARGS Trigger: GCTTCCCCTTGCTGTGTGTCCCAGGATCTGGAACCACTGACCATTCTCTATTACATTGGAAATACGCCCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
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| CDS TCA 72 bp | TGGGTGGGAGATGTTAAGTCTTTGGATTTAAGGATCTaGTACAGTTCAATCCGCTGCTCGGCCACTCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: WVGDVKSLDLRI*YSSIRCSATLA Trigger: AGCCAGAGTGGCCGAGCAGCGGATTGAACTGTATCAGATCCTTAAATCCAAAGACTTAACATCTCCCACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
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| CDS GCA 72 bp | ATCACCACTGGCATATGTAGAGGTGCCATCAATACCTaGAAATCTCGCCTCGAGCTCTTCGCTTTTATTCGG | + |
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Preference number: 6 (lower is better) Translates to: ITTGICRGAINT*KSRLELFAFIR Trigger: CCGAATAAAAGCGAAGAGCTCGAGGCGAGATTTGCAGGTATTGATGGCACCTCTACATATGCCAGTGGTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
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| CDS TCA 72 bp | TTTTCTCCATTGTTGAGACATCAAAGCGGACGATTCTaGAGTAGGGTCTGTAGAAAGTGGGCGGGATGGCAT | + |
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Preference number: 6 (lower is better) Translates to: FSPLLRHQSGRF*SRVCRKWAGWH Trigger: ATGCCATCCCGCCCACTTTCTACAGACCCTACTTCAGAATCGTCCGCTTTGATGTCTCAACAATGGAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
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| CDS CCA 72 bp | GTTCGATCTTGGGCGTATTTCCAATGTAATAGAGAATaGTCAGTGGTTCCAGATCCTGGGACACACAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: VRSWAYFQCNRE*SVVPDPGTHSK Trigger: CTTGCTGTGTGTCCCAGGATCTGGAACCACTGACCATTCTCTATTACATTGGAAATACGCCCAAGATCGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
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| CDS CAA 90 bp | CATAGATATGGGCATGCCCCAGCACAGAAGTTAGCATTGTACCCTTaGGGTTCATGGATCCATTTCCATCCAAGATCCCTCTTAAAATCA | + |
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Preference number: 6 (lower is better) Translates to: HRYGHAPAQKLALYP*GSWIHFHPRSLLKS Trigger: TGATTTTAAGAGGGATCTTGGATGGAAATGGATCCATGAACCCAAAGGGTACAATGCTAACTTCTGTGCTGGGGCATGCCCATATCTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045288.14 ENSMUST00000195201.2 |
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