Pregenerated sensors for TGFA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029999Ensembl transcript IDs: ENSMUST00000032066.13, ENSMUST00000192058.4
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACAGTTTTGAAGACTCTCAAGGAAGAAGCCTGCCCAGGCAGTTGTaGACTGAGGGGGAAGGTCTCCCAGCATGTCCCATGGGCCTGGGC | + |
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Preference number: 1 (lower is better) Translates to: HSFEDSQGRSLPRQL*TEGEGLPACPMGLG Trigger: GCCCAGGCCCATGGGACATGCTGGGAGACCTTCCCCCTCAGTGCACAACTGCCTGGGCAGGCTTCTTCCTTGAGAGTCTTCAAAACTGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR GCA 90 bp | AGCCCAGGAACAAGGGTGGGCTCAATGGGTCAGAGCATCTTCGGGTaGTCAGGGAACACATTTCCTTCCCCAGAGAGGGGTGGAGAGGCT | + |
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Preference number: 1 (lower is better) Translates to: SPGTRVGSMGQSIFG*SGNTFPSPERGGEA Trigger: AGCCTCTCCACCCCTCTCTGGGGAAGGAAATGTGTTCCCTGAGCACCCGAAGATGCTCTGACCCATTGAGCCCACCCTTGTTCCTGGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR CCA 90 bp | TGGGCCTGGGCACTGCCAGGGGTGTTGTCCCAAGATGCCTTTTCTTaGTTGGGCTGTCATAGGCCACCTGGCCAAATTCCTCCTCTGGGA | + |
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Preference number: 1 (lower is better) Translates to: WAWALPGVLSQDAFS*LGCHRPPGQIPPLG Trigger: TCCCAGAGGAGGAATTTGGCCAGGTGGCCTATGACAGCCCAACCAAGAAAAGGCATCTTGGGACAACACCCCTGGCAGTGCCCAGGCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR TCA 90 bp | TGTACAGGCACTGGGATGGTACTGGCTGCTGCGACTGGCTGGACCTaGGAACAGGACCGTTTGGACACTAAAGCTGAGGTCCTCCCGAGA | + |
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Preference number: 1 (lower is better) Translates to: CTGTGMVLAAATGWT*EQDRLDTKAEVLPR Trigger: TCTCGGGAGGACCTCAGCTTTAGTGTCCAAACGGTCCTGTTCTCAGGTCCAGCCAGTCGCAGCAGCCAGTACCATCCCAGTGCCTGTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR CCA 90 bp | CAGGGACTTTCTTGCCTGAGGGGGCACAGCCTTGGGATAGCAGGTTaGTTCCCAGCAGGATGCACATCTGAATTCTGTCTCTACGGCCCC | + |
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Preference number: 1 (lower is better) Translates to: QGLSCLRGHSLGIAG*FPAGCTSEFCLYGP Trigger: GGGGCCGTAGAGACAGAATTCAGATGTGCATCCTGCTGGGAACCAACCTGCTATCCCAAGGCTGTGCCCCCTCAGGCAAGAAAGTCCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR GCA 90 bp | AGGCAGCTTTATCACACAGTTTTGAAGACTCTCAAGGAAGAAGCCTaGCCAGGCAGTTGTGCACTGAGGGGGAAGGTCTCCCAGCATGTC | + |
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Preference number: 1 (lower is better) Translates to: RQLYHTVLKTLKEEA*PGSCALRGKVSQHV Trigger: GACATGCTGGGAGACCTTCCCCCTCAGTGCACAACTGCCTGGGCAGGCTTCTTCCTTGAGAGTCTTCAAAACTGTGTGATAAAGCTGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR TCA 90 bp | AGAGGGCTGAAGTCCAGTGAGGTTGATTGGTGTCTGAGCAGCAGGTaGCACTTGGCCTTGACCCACTTGTATGACCCAAGGAAAGCAAAC | + |
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Preference number: 1 (lower is better) Translates to: RGLKSSEVDWCLSSR*HLALTHLYDPRKAN Trigger: GTTTGCTTTCCTTGGGTCATACAAGTGGGTCAAGGCCAAGTGTCACCTGCTGCTCAGACACCAATCAACCTCACTGGACTTCAGCCCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR TCA 90 bp | ATCATGGGTTCAAGGTTGGCCTGGGCTATAGAGTACAACCCTGTGTaGAAAATGTGTTGTCTGGGGTGGCCTCCCTTTGGCCTTGGGAGA | + |
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Preference number: 1 (lower is better) Translates to: IMGSRLAWAIEYNPV*KMCCLGWPPFGLGR Trigger: TCTCCCAAGGCCAAAGGGAGGCCACCCCAGACAACACATTTTTCACACAGGGTTGTACTCTATAGCCCAGGCCAACCTTGAACCCATGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR TCA 90 bp | AAACATAAGCCAGGTATGGAGGTACACACCTGTACTCCAATAGGCTaGGGCGGGGGAATCATGGGTTCAAGGTTGGCCTGGGCTATAGAG | + |
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Preference number: 1 (lower is better) Translates to: KHKPGMEVHTCTPIG*GGGIMGSRLAWAIE Trigger: CTCTATAGCCCAGGCCAACCTTGAACCCATGATTCCCCCGCCTCAGCCTATTGGAGTACAGGTGTGTACCTCCATACCTGGCTTATGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR TCA 90 bp | ATAAAGGGCTGGTCCCCTTCATGGATTTGGCTCACAGCTCATTGCTaGTGCTGGAGCTGGGCTCACGAGGACGCTAATCCACTTAATCAA | + |
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Preference number: 1 (lower is better) Translates to: IKGWSPSWIWLTAHC*CWSWAHEDANPLNQ Trigger: TTGATTAAGTGGATTAGCGTCCTCGTGAGCCCAGCTCCAGCATCAGCAATGAGCTGTGAGCCAAATCCATGAAGGGGACCAGCCCTTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR CCA 90 bp | AAGAATGAGGAACAGGCAGCTTCTGACAGAAGCTTCAAACCAACTTaGTATGCCCAGTACCCCTTCCCTCATGCCTTACTTCAGAGGCCC | + |
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Preference number: 1 (lower is better) Translates to: KNEEQAASDRSFKPT*YAQYPFPHALLQRP Trigger: GGGCCTCTGAAGTAAGGCATGAGGGAAGGGGTACTGGGCATACCAAGTTGGTTTGAAGCTTCTGTCAGAAGCTGCCTGTTCCTCATTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR TCA 90 bp | ATCTGTGCTGTGACATGGCACAGGAGAAGGTACACAGCGTTTGTCTaGCTGACTTCCAAAATCAAAGTCACCAACGCAGCAGGGCTGTCA | + |
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Preference number: 1 (lower is better) Translates to: ICAVTWHRRRYTAFV*LTSKIKVTNAAGLS Trigger: TGACAGCCCTGCTGCGTTGGTGACTTTGATTTTGGAAGTCAGTCAGACAAACGCTGTGTACCTTCTCCTGTGCCATGTCACAGCACAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR TCA 90 bp | CATGTTATCCATCTAATAAATAAGACACGCATCCTGACGACAGCCTaGGGAGATGTCAGGGCGCATGGGACGCCATGGTGTCTTCAAAGA | + |
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Preference number: 1 (lower is better) Translates to: HVIHLINKTRILTTA*GDVRAHGTPWCLQR Trigger: TCTTTGAAGACACCATGGCGTCCCATGCGCCCTGACATCTCCTCAGGCTGTCGTCAGGATGCGTGTCTTATTTATTAGATGGATAACATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR GCA 90 bp | CTTAACCTATTTTCTCTAGTAATCAAAAAGTGCTGGGCGTGGTGGTaGACATCTGTAAGCCCAGCTTCCAGGTTGCTGAAGCAGGATCTT | + |
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Preference number: 1 (lower is better) Translates to: LNLFSLVIKKCWAWW*TSVSPASRLLKQDL Trigger: AAGATCCTGCTTCAGCAACCTGGAAGCTGGGCTTACAGATGTGCACCACCACGCCCAGCACTTTTTGATTACTAGAGAAAATAGGTTAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR CCA 90 bp | AGCAAACTTAACCTATTTTCTCTAGTAATCAAAAAGTGCTGGGCGTaGTGGTGCACATCTGTAAGCCCAGCTTCCAGGTTGCTGAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: SKLNLFSLVIKKCWA*WCTSVSPASRLLKQ Trigger: CTGCTTCAGCAACCTGGAAGCTGGGCTTACAGATGTGCACCACCACGCCCAGCACTTTTTGATTACTAGAGAAAATAGGTTAAGTTTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR CCA 90 bp | CTATTTGGTGTAACTTCACGGCCCGCCACTCATGCATCGCTAGCATaGACGCCTGACATTGACATAAAGAGATTACAAATAAAACCATGT | + |
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Preference number: 1 (lower is better) Translates to: LFGVTSRPATHASLA*TPDIDIKRLQIKPC Trigger: ACATGGTTTTATTTGTAATCTCTTTATGTCAATGTCAGGCGTCCATGCTAGCGATGCATGAGTGGCGGGCCGTGAAGTTACACCAAATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR GCA 90 bp | GGCTTCAGGCCTTGTGAACAAAGGGTTAAGACCTGGGCAGATCAATaGCTAGATCATATGAGAGGAGAAAAATTCATAAAGGAGAAGAAT | + |
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Preference number: 1 (lower is better) Translates to: GFRPCEQRVKTWADQ*LDHMRGEKFIKEKN Trigger: ATTCTTCTCCTTTATGAATTTTTCTCCTCTCATATGATCTAGGCATTGATCTGCCCAGGTCTTAACCCTTTGTTCACAAGGCCTGAAGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR GCA 90 bp | GTCCACCTGGAATCTATCTTTCATTTCAGACTGGGTCTCCAATTGTaGTTTTCCGTGGAGAAAACATGTCCCATGGTGTGTTTAAAGTTA | + |
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Preference number: 1 (lower is better) Translates to: VHLESIFHFRLGLQL*FSVEKTCPMVCLKL Trigger: TAACTTTAAACACACCATGGGACATGTTTTCTCCACGGAAAAGCACAATTGGAGACCCAGTCTGAAATGAAAGATAGATTCCAGGTGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR TCA 90 bp | ATTGAATTCAGGTTATCTGGGATTTTGGTAAGTGCCATTGCTAACTaGGCTGTCTCAATGTCTCTAGAATTAATTTCAGCTCATTTAATG | + |
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Preference number: 1 (lower is better) Translates to: IEFRLSGILVSAIAN*AVSMSLELISAHLM Trigger: CATTAAATGAGCTGAAATTAATTCTAGAGACATTGAGACAGCTCAGTTAGCAATGGCACTTACCAAAATCCCAGATAACCTGAATTCAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR-3UTR GCA 90 bp | CCAGTACCCCTTCCCTCATGCCTTACTTCAGAGGCCCTGGAGGGCCGAGGGGGCCTGCCCAGGCAGTTGTaGACTGAGGGGGAAGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: PVPLPSCLTSEALEGRGGLPRQL*TEGEGL Trigger: GAGACCTTCCCCCTCAGTGCACAACTGCCTGGGCAG...GCCCCCTCGGCCCTCCAGGGCCTCTGAAGTAAGGCATGAGGGAAGGGGTACTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR-3UTR TCA 90 bp | GGACTCAGGGACATAGTCACTTCCCTCACCAGTGCAGGTGGGTGGGTACCAACCCTCCCTGCCCTCCAGTaGGCCAGTACTTCAGGCGGG | + |
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Preference number: 2 (lower is better) Translates to: GLRDIVTSLTSAGGWVPTLPALQ*ASTSGG Trigger: CCCGCCTGAAGTACTGGCTCACTGGAGGGCAGGGAG...GGTTGGTACCCACCCACCTGCACTGGTGAGGGAAGTGACTATGTCCCTGAGTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR CAA 90 bp | AAGGTCTCCCAGCATGTCCCATGGGCCTGGGCACTGCCAGGGGTGTaGTCCCAAGATGCCTTTTCTTGGTTGGGCTGTCATAGGCCACCT | + |
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Preference number: 2 (lower is better) Translates to: KVSQHVPWAWALPGV*SQDAFSWLGCHRPP Trigger: AGGTGGCCTATGACAGCCCAACCAAGAAAAGGCATCTTGGGACAACACCCCTGGCAGTGCCCAGGCCCATGGGACATGCTGGGAGACCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR-3UTR GCA 90 bp | CCAGTACCCCTTCCCTCATGCCTTACTTCAGAGGCCCTGGAGGGCCGAGGGGGCTGGTTCCCAGCAGGATaGACATCTGAATTCTGTCTC | + |
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Preference number: 2 (lower is better) Translates to: PVPLPSCLTSEALEGRGGWFPAG*TSEFCL Trigger: GAGACAGAATTCAGATGTGCATCCTGCTGGGAACCA...GCCCCCTCGGCCCTCCAGGGCCTCTGAAGTAAGGCATGAGGGAAGGGGTACTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR CAA 90 bp | GCCTGGGCACTGCCAGGGGTGTTGTCCCAAGATGCCTTTTCTTGGTaGGGCTGTCATAGGCCACCTGGCCAAATTCCTCCTCTGGGATCT | + |
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Preference number: 2 (lower is better) Translates to: AWALPGVLSQDAFSW*GCHRPPGQIPPLGS Trigger: AGATCCCAGAGGAGGAATTTGGCCAGGTGGCCTATGACAGCCCAACCAAGAAAAGGCATCTTGGGACAACACCCCTGGCAGTGCCCAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR CAA 90 bp | TCACACAGTTTTGAAGACTCTCAAGGAAGAAGCCTGCCCAGGCAGTaGTGCACTGAGGGGGAAGGTCTCCCAGCATGTCCCATGGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: SHSFEDSQGRSLPRQ*CTEGEGLPACPMGL Trigger: CAGGCCCATGGGACATGCTGGGAGACCTTCCCCCTCAGTGCACAACTGCCTGGGCAGGCTTCTTCCTTGAGAGTCTTCAAAACTGTGTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR-3UTR CCA 90 bp | CCTTTGGCCTTGGGAGAGAGACAAGTTTATTACTCATTACAGGACTGGGGCCTGTCCCAGCATGTCCCATaGGCCTGGGCACTGCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: PLALGERQVYYSLQDWGLSQHVP*AWALPG Trigger: CCCTGGCAGTGCCCAGGCCCATGGGACATGCTGGGA...CAGGCCCCAGTCCTGTAATGAGTAATAAACTTGTCTCTCTCCCAAGGCCAAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR CAA 90 bp | TGCTGGAGCTGGGCTCACGAGGACGCTAATCCACTTAATCAAGGGTaGGGGTGTGCATCCTTCCTAGGTGCCCACACAGGCTCTTTTGTC | + |
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Preference number: 2 (lower is better) Translates to: CWSWAHEDANPLNQG*GCASFLGAHTGSFV Trigger: GACAAAAGAGCCTGTGTGGGCACCTAGGAAGGATGCACACCCCAACCCTTGATTAAGTGGATTAGCGTCCTCGTGAGCCCAGCTCCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR-3UTR GCA 90 bp | ATGTGTTGTCTGGGGTGGCCTCCCTTTGGCCTTGGGAGAGAGACAAGTTTATTACATGGGCCTGGGCACTaGCAGGGGTGTTGTCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: MCCLGWPPFGLGRETSLLHGPGH*QGCCPK Trigger: CTTGGGACAACACCCCTGGCAGTGCCCAGGCCCATG...TAATAAACTTGTCTCTCTCCCAAGGCCAAAGGGAGGCCACCCCAGACAACACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR-3UTR GCA 90 bp | ATGGGTCAGAGCATCTTCGGGTGCTCAGGGAACACATTTCCTTCCCCAGAGAGGTCAAGGGTTGGGGTGTaGATCCTTCCTAGGTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: MGQSIFGCSGNTFPSPERSRVGV*ILPRCP Trigger: TGGGCACCTAGGAAGGATGCACACCCCAACCCTTGA...CCTCTCTGGGGAAGGAAATGTGTTCCCTGAGCACCCGAAGATGCTCTGACCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR-3UTR GCA 90 bp | GTTTGCTACAGCATGTATCCAGGGACTTTCTTGCCTGAGGGGGCACAGCCTTGGGGTGTTGTCCCAAGATaGCTTTTCTTGGTTGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: VCYSMYPGTFLPEGAQPWGVVPR*LFLVGL Trigger: CAGCCCAACCAAGAAAAGGCATCTTGGGACAACACC...CCAAGGCTGTGCCCCCTCAGGCAAGAAAGTCCCTGGATACATGCTGTAGCAAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR-3UTR CCA 90 bp | AACAAGCCCCACATCTCCTCCATTTGTGTTGCTCCCTGCCCTCCAGTGAGCCAGGTAATCAAAAAGTGCTaGGCGTGGTGGTGCACATCT | + |
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Preference number: 2 (lower is better) Translates to: NKPHISSICVAPCPPVSQVIKKC*AWWCTS Trigger: AGATGTGCACCACCACGCCCAGCACTTTTTGATTAC...CTGGCTCACTGGAGGGCAGGGAGCAACACAAATGGAGGAGATGTGGGGCTTGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR-3UTR CCA 90 bp | CCTTTGGCCTTGGGAGAGAGACAAGTTTATTACTCATTACAGGACTGGGGCCTGACCAGTGCAGGTGGGTaGGTACCAACCATGCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: PLALGERQVYYSLQDWGLTSAGG*VPTMPP Trigger: AGGAGGCATGGTTGGTACCCACCCACCTGCACTGGT...CAGGCCCCAGTCCTGTAATGAGTAATAAACTTGTCTCTCTCCCAAGGCCAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR CAA 90 bp | AAGGTTGGCCTGGGCTATAGAGTACAACCCTGTGTGAAAAATGTGTaGTCTGGGGTGGCCTCCCTTTGGCCTTGGGAGAGAGACAAGTTT | + |
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Preference number: 2 (lower is better) Translates to: KVGLGYRVQPCVKNV*SGVASLWPWERDKF Trigger: AAACTTGTCTCTCTCCCAAGGCCAAAGGGAGGCCACCCCAGACAACACATTTTTCACACAGGGTTGTACTCTATAGCCCAGGCCAACCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR-3UTR CCA 90 bp | GACAGAAGCTTCAAACCAACTTGGTATGCCCAGTACCCCTTCCCTCATGCCTTACTTGGGATAGCAGGTTaGTTCCCAGCAGGATGCACA | + |
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Preference number: 2 (lower is better) Translates to: DRSFKPTWYAQYPFPHALLGIAG*FPAGCT Trigger: TGTGCATCCTGCTGGGAACCAACCTGCTATCCCAAG...TAAGGCATGAGGGAAGGGGTACTGGGCATACCAAGTTGGTTTGAAGCTTCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR-3UTR TCA 90 bp | GAGAAGAATGAGGAACAGGCAGCTTCTGACAGAAGCTTCAAACCAACTTGGTATCTCACAGCTCATTGCTaGTGCTGGAGCTGGGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: EKNEEQAASDRSFKPTWYLTAHC*CWSWAH Trigger: GTGAGCCCAGCTCCAGCATCAGCAATGAGCTGTGAG...ATACCAAGTTGGTTTGAAGCTTCTGTCAGAAGCTGCCTGTTCCTCATTCTTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR-3UTR TCA 90 bp | TTGGTTCTGTGTATGTCCACCTGGAATCTATCTTTCATTTCAGACTGGGTCTCCTGTCTGAGCAGCAGGTaGCACTTGGCCTTGACCCAC | + |
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Preference number: 2 (lower is better) Translates to: LVLCMSTWNLSFISDWVSCLSSR*HLALTH Trigger: GTGGGTCAAGGCCAAGTGTCACCTGCTGCTCAGACA...GGAGACCCAGTCTGAAATGAAAGATAGATTCCAGGTGGACATACACAGAACCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR-3UTR GCA 90 bp | TGTTGTCTGGGGTGGCCTCCCTTTGGCCTTGGGAGAGAGACAAGTTTATTACTCTGCTGGTCTATCCAGTaGCTCATAGGCACTAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: CCLGWPPFGLGRETSLLLCWSIQ*LIGTRK Trigger: TTTCCTAGTGCCTATGAGGCACTGGATAGACCAGCA...GAGTAATAAACTTGTCTCTCTCCCAAGGCCAAAGGGAGGCCACCCCAGACAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR-3UTR CCA 90 bp | ATGTGTTGTCTGGGGTGGCCTCCCTTTGGCCTTGGGAGAGAGACAAGTTTATTAAGCTCATTCTCGGTGTaGGTTAGCAAGAAGGCCAAC | + |
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Preference number: 2 (lower is better) Translates to: MCCLGWPPFGLGRETSLLSSFSV*VSKKAN Trigger: GTTGGCCTTCTTGCTAACCCACACCGAGAATGAGCT...TAATAAACTTGTCTCTCTCCCAAGGCCAAAGGGAGGCCACCCCAGACAACACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR-3UTR CCA 90 bp | ATGTGTTGTCTGGGGTGGCCTCCCTTTGGCCTTGGGAGAGAGACAAGTTTATTAAAAAAGTGCTGGGCGTaGTGGTGCACATCTGTAAGC | + |
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Preference number: 2 (lower is better) Translates to: MCCLGWPPFGLGRETSLLKKCWA*WCTSVS Trigger: GCTTACAGATGTGCACCACCACGCCCAGCACTTTTT...TAATAAACTTGTCTCTCTCCCAAGGCCAAAGGGAGGCCACCCCAGACAACACAT 50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR CAA 90 bp | TCAGAGGCCCTGGAGGGCCGAGGGGGCAGACTTTTCACTTCTGAGTaGGAGAATGGTCTCTTTAATATGCAACTGAATGTATTCTGTCTC | + |
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Preference number: 2 (lower is better) Translates to: SEALEGRGGRLFTSE*ENGLFNMQLNVFCL Trigger: GAGACAGAATACATTCAGTTGCATATTAAAGAGACCATTCTCCAACTCAGAAGTGAAAAGTCTGCCCCCTCGGCCCTCCAGGGCCTCTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR-3UTR CCA 90 bp | ACTTATTACACTGTGGAGAGGAGTTACTTTCCAGTTGTGTGTGTGTACATGCACGTACAGGCACTGGGATaGTACTGGCTGCTGCGACTG | + |
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Preference number: 2 (lower is better) Translates to: TYYTVERSYFPVVCVYMHVQALG*YWLLRL Trigger: CAGTCGCAGCAGCCAGTACCATCCCAGTGCCTGTAC...GTGCATGTACACACACACAACTGGAAAGTAACTCCTCTCCACAGTGTAATAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR CAA 90 bp | AGTACAACCCTGTGTGAAAAATGTGTTGTCTGGGGTGGCCTCCCTTaGGCCTTGGGAGAGAGACAAGTTTATTACTCATTACAGGACTGG | + |
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Preference number: 2 (lower is better) Translates to: STTLCEKCVVWGGLP*ALGERQVYYSLQDW Trigger: CCAGTCCTGTAATGAGTAATAAACTTGTCTCTCTCCCAAGGCCAAAGGGAGGCCACCCCAGACAACACATTTTTCACACAGGGTTGTACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR-3UTR GCA 90 bp | ATCTTTCATTTCAGACTGGGTCTCCAATTGTGCTTTTCCGTGGAGAAAACATGTGATGGTACTGGCTGCTaGGACTGGCTGGACCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: IFHFRLGLQLCFSVEKTCDGTGC*DWLDLR Trigger: TCTCAGGTCCAGCCAGTCGCAGCAGCCAGTACCATC...ACATGTTTTCTCCACGGAAAAGCACAATTGGAGACCCAGTCTGAAATGAAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR-3UTR CCA 90 bp | ATAAAGCATCAAACCAAAATAATAGCAAGAATGACAACTTCTGCCTGGAGCTGTCATGTCCCATGGGCCTaGGCACTGCCAGGGGTGTTG | + |
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Preference number: 2 (lower is better) Translates to: IKHQTKIIARMTTSAWSCHVPWA*ALPGVL Trigger: CAACACCCCTGGCAGTGCCCAGGCCCATGGGACATG...ACAGCTCCAGGCAGAAGTTGTCATTCTTGCTATTATTTTGGTTTGATGCTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR-3UTR GCA 90 bp | TTGGTTCTGTGTATGTCCACCTGGAATCTATCTTTCATTTCAGACTGGGTCTCCGCGTGTGTGTGCGTGTaGGTGTACGTAGAAATCAGA | + |
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Preference number: 2 (lower is better) Translates to: LVLCMSTWNLSFISDWVSACVCV*VYVEIR Trigger: TCTGATTTCTACGTACACGCACACGCACACACACGC...GGAGACCCAGTCTGAAATGAAAGATAGATTCCAGGTGGACATACACAGAACCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR-3UTR TCA 90 bp | TGTTGTCTGGGGTGGCCTCCCTTTGGCCTTGGGAGAGAGACAAGTTTATTACTCTTTATCACACAGTTTTaGAGACTCTCAAGGAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: CCLGWPPFGLGRETSLLLFITQF*RLSRKK Trigger: CTTCTTCCTTGAGAGTCTTCAAAACTGTGTGATAAA...GAGTAATAAACTTGTCTCTCTCCCAAGGCCAAAGGGAGGCCACCCCAGACAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR-3UTR TCA 90 bp | ATCTTTCATTTCAGACTGGGTCTCCAATTGTGCTTTTCCGTGGAGAAAACATGTAGCAGGATGCACATCTaGATTCTGTCTCTACGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: IFHFRLGLQLCFSVEKTCSRMHI*ILSLRP Trigger: GGGCCGTAGAGACAGAATTCAGATGTGCATCCTGCT...ACATGTTTTCTCCACGGAAAAGCACAATTGGAGACCCAGTCTGAAATGAAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR-3UTR CCA 90 bp | TGTTGTCTGGGGTGGCCTCCCTTTGGCCTTGGGAGAGAGACAAGTTTATTACTCTCTTTCATTTCAGACTaGGTCTCCAATTGTGCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: CCLGWPPFGLGRETSLLLSFISD*VSNCAF Trigger: AAAAGCACAATTGGAGACCCAGTCTGAAATGAAAGA...GAGTAATAAACTTGTCTCTCTCCCAAGGCCAAAGGGAGGCCACCCCAGACAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR-3UTR TCA 90 bp | TTGGTTCTGTGTATGTCCACCTGGAATCTATCTTTCATTTCAGACTGGGTCTCCCTTGACCCACTTGTATaGCCCAAGGAAAGCAAACTT | + |
|
Preference number: 2 (lower is better) Translates to: LVLCMSTWNLSFISDWVSLDPLV*PKESKL Trigger: AAGTTTGCTTTCCTTGGGTCATACAAGTGGGTCAAG...GGAGACCCAGTCTGAAATGAAAGATAGATTCCAGGTGGACATACACAGAACCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR-3UTR CCA 90 bp | GACAGAAGCTTCAAACCAACTTGGTATGCCCAGTACCCCTTCCCTCATGCCTTACTTTATCAAAGTGGCTaGACATTTCTATTTGGTGTA | + |
|
Preference number: 2 (lower is better) Translates to: DRSFKPTWYAQYPFPHALLYQSG*TFLFGV Trigger: TACACCAAATAGAAATGTCCAGCCACTTTGATAAAG...TAAGGCATGAGGGAAGGGGTACTGGGCATACCAAGTTGGTTTGAAGCTTCTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR-3UTR CCA 90 bp | TTGGTTCTGTGTATGTCCACCTGGAATCTATCTTTCATTTCAGACTGGGTCTCCAATTGTGCTTTTCCGTaGAGAAAACATGTCCCATGG | + |
|
Preference number: 2 (lower is better) Translates to: LVLCMSTWNLSFISDWVSNCAFP*RKHVPW Trigger: CCATGGGACATGTTTTCTCCACGGAAAAGCACAATT...GGAGACCCAGTCTGAAATGAAAGATAGATTCCAGGTGGACATACACAGAACCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR CAA 90 bp | TTGTTCCCACCTTTTTCTGGGGCACATGACAAACTAACTCATGGTTaGGTTCTGTGTATGTCCACCTGGAATCTATCTTTCATTTCAGAC | + |
|
Preference number: 2 (lower is better) Translates to: LFPPFSGAHDKLTHG*VLCMSTWNLSFISD Trigger: GTCTGAAATGAAAGATAGATTCCAGGTGGACATACACAGAACCAAACCATGAGTTAGTTTGTCATGTGCCCCAGAAAAAGGTGGGAACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR-3UTR CCA 90 bp | ATCTTTCATTTCAGACTGGGTCTCCAATTGTGCTTTTCCGTGGAGAAAACATGTCTTGTCTTTAAAATGTaGTCCACTGGCCTCTTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: IFHFRLGLQLCFSVEKTCLVFKM*STGLFS Trigger: AGAGAAGAGGCCAGTGGACCACATTTTAAAGACAAG...ACATGTTTTCTCCACGGAAAAGCACAATTGGAGACCCAGTCTGAAATGAAAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR-3UTR CCA 90 bp | ATAAAGCATCAAACCAAAATAATAGCAAGAATGACAACTTCTGCCTGGAGCTGTAAGCCAATAAAGGGCTaGTCCCCTTCATGGATTTGG | + |
|
Preference number: 2 (lower is better) Translates to: IKHQTKIIARMTTSAWSCKPIKG*SPSWIW Trigger: CCAAATCCATGAAGGGGACCAGCCCTTTATTGGCTT...ACAGCTCCAGGCAGAAGTTGTCATTCTTGCTATTATTTTGGTTTGATGCTTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR-3UTR CCA 90 bp | TTGGTTCTGTGTATGTCCACCTGGAATCTATCTTTCATTTCAGACTGGGTCTCCCTTACTTTATCAAAGTaGCTGGACATTTCTATTTGG | + |
|
Preference number: 2 (lower is better) Translates to: LVLCMSTWNLSFISDWVSLTLSK*LDISIW Trigger: CCAAATAGAAATGTCCAGCCACTTTGATAAAGTAAG...GGAGACCCAGTCTGAAATGAAAGATAGATTCCAGGTGGACATACACAGAACCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR CCA 72 bp | CTGAGGGGGAAGGTCTCCCAGCATGTCCCATGGGCCTaGGCACTGCCAGGGGTGTTGTCCCAAGATGCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LRGKVSQHVPWA*ALPGVLSQDAF Trigger: AAAGGCATCTTGGGACAACACCCCTGGCAGTGCCCAGGCCCATGGGACATGCTGGGAGACCTTCCCCCTCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR CCA 72 bp | TGTGCACTGAGGGGGAAGGTCTCCCAGCATGTCCCATaGGCCTGGGCACTGCCAGGGGTGTTGTCCCAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: CALRGKVSQHVP*AWALPGVLSQD Trigger: ATCTTGGGACAACACCCCTGGCAGTGCCCAGGCCCATGGGACATGCTGGGAGACCTTCCCCCTCAGTGCACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR GCA 72 bp | CAAACCAACTTGGTATGCCCAGTACCCCTTCCCTCATaGCTTACTTCAGAGGCCCTGGAGGGCCGAGGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: QTNLVCPVPLPS*LTSEALEGRGG Trigger: GCCCCCTCGGCCCTCCAGGGCCTCTGAAGTAAGGCATGAGGGAAGGGGTACTGGGCATACCAAGTTGGTTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR GCA 72 bp | GGAAGGTCTCCCAGCATGTCCCATGGGCCTGGGCACTaGCAGGGGTGTTGTCCCAAGATGCCTTTTCTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: GRSPSMSHGPGH*QGCCPKMPFLG Trigger: ACCAAGAAAAGGCATCTTGGGACAACACCCCTGGCAGTGCCCAGGCCCATGGGACATGCTGGGAGACCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR GCA 72 bp | TCTAGGACTCAGGGACATAGTCACTTCCCTCACCAGTaGAGGTGGGTGGGTACCAACCATGCCTCCTCCCCC | + |
|
Preference number: 3 (lower is better) Translates to: SRTQGHSHFPHQ*RWVGTNHASSP Trigger: GGGGGAGGAGGCATGGTTGGTACCCACCCACCTGCACTGGTGAGGGAAGTGACTATGTCCCTGAGTCCTAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR CCA 72 bp | GAGGTGTTTGAGCCAGCTGCATCTGTGTACAGGCACTaGGATGGTACTGGCTGCTGCGACTGGCTGGACCTG | + |
|
Preference number: 3 (lower is better) Translates to: EVFEPAASVYRH*DGTGCCDWLDL Trigger: CAGGTCCAGCCAGTCGCAGCAGCCAGTACCATCCCAGTGCCTGTACACAGATGCAGCTGGCTCAAACACCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR-3UTR CAA 90 bp | GGACTCAGGGACATAGTCACTTCCCTCACCAGTGCAGGTGGGTGGGTACCAACCTTGGCTCACAGCTCATaGCTGATGCTGGAGCTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: GLRDIVTSLTSAGGWVPTLAHSS*LMLELG Trigger: GCCCAGCTCCAGCATCAGCAATGAGCTGTGAGCCAA...GGTTGGTACCCACCCACCTGCACTGGTGAGGGAAGTGACTATGTCCCTGAGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR-3UTR CAA 90 bp | TTCTGTCTCCTGACAGTCCCAAGCAGCCCAGGAACAAGGGTGGGCTCAATGGGTTATCCAGGGACTTTCTaGCCTGAGGGGGCACAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: FCLLTVPSSPGTRVGSMGYPGTF*PEGAQP Trigger: AGGCTGTGCCCCCTCAGGCAAGAAAGTCCCTGGATA...ACCCATTGAGCCCACCCTTGTTCCTGGGCTGCTTGGGACTGTCAGGAGACAGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR GCA 72 bp | GAAGACTCTCAAGGAAGAAGCCTGCCCAGGCAGTTGTaGACTGAGGGGGAAGGTCTCCCAGCATGTCCCATG | + |
|
Preference number: 3 (lower is better) Translates to: EDSQGRSLPRQL*TEGEGLPACPM Trigger: CATGGGACATGCTGGGAGACCTTCCCCCTCAGTGCACAACTGCCTGGGCAGGCTTCTTCCTTGAGAGTCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR GCA 72 bp | GCATCTGTGTACAGGCACTGGGATGGTACTGGCTGCTaGGACTGGCTGGACCTGAGAACAGGACCGTTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: ASVYRHWDGTGC*DWLDLRTGPFG Trigger: TCCAAACGGTCCTGTTCTCAGGTCCAGCCAGTCGCAGCAGCCAGTACCATCCCAGTGCCTGTACACAGATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR CCA 72 bp | CAGTCCCAAGCAGCCCAGGAACAAGGGTGGGCTCAATaGGTCAGAGCATCTTCGGGTGCTCAGGGAACACAT | + |
|
Preference number: 3 (lower is better) Translates to: QSQAAQEQGWAQ*VRASSGAQGTH Trigger: ATGTGTTCCCTGAGCACCCGAAGATGCTCTGACCCATTGAGCCCACCCTTGTTCCTGGGCTGCTTGGGACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR TCA 72 bp | ACTGGGATGGTACTGGCTGCTGCGACTGGCTGGACCTaGGAACAGGACCGTTTGGACACTAAAGCTGAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: TGMVLAAATGWT*EQDRLDTKAEV Trigger: GACCTCAGCTTTAGTGTCCAAACGGTCCTGTTCTCAGGTCCAGCCAGTCGCAGCAGCCAGTACCATCCCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR GCA 72 bp | ACAAGGGTGGGCTCAATGGGTCAGAGCATCTTCGGGTaGTCAGGGAACACATTTCCTTCCCCAGAGAGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: TRVGSMGQSIFG*SGNTFPSPERG Trigger: ACCCCTCTCTGGGGAAGGAAATGTGTTCCCTGAGCACCCGAAGATGCTCTGACCCATTGAGCCCACCCTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR CCA 72 bp | TATCCAGGGACTTTCTTGCCTGAGGGGGCACAGCCTTaGGATAGCAGGTTGGTTCCCAGCAGGATGCACATC | + |
|
Preference number: 3 (lower is better) Translates to: YPGTFLPEGAQP*DSRLVPSRMHI Trigger: GATGTGCATCCTGCTGGGAACCAACCTGCTATCCCAAGGCTGTGCCCCCTCAGGCAAGAAAGTCCCTGGATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR-3UTR CAA 90 bp | GAGGTGTTTGAGCCAGCTGCATCTGTGTACAGGCACTGGGATGGTACTGGCTGCGATGCCTTTTCTTGGTaGGGCTGTCATAGGCCACCT | + |
|
Preference number: 3 (lower is better) Translates to: EVFEPAASVYRHWDGTGCDAFSW*GCHRPP Trigger: AGGTGGCCTATGACAGCCCAACCAAGAAAAGGCATC...GCAGCCAGTACCATCCCAGTGCCTGTACACAGATGCAGCTGGCTCAAACACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR CCA 72 bp | TGCCAGGGGTGTTGTCCCAAGATGCCTTTTCTTGGTTaGGCTGTCATAGGCCACCTGGCCAAATTCCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: CQGCCPKMPFLG*AVIGHLAKFLL Trigger: GAGGAGGAATTTGGCCAGGTGGCCTATGACAGCCCAACCAAGAAAAGGCATCTTGGGACAACACCCCTGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR CCA 72 bp | GCACTGCCAGGGGTGTTGTCCCAAGATGCCTTTTCTTaGTTGGGCTGTCATAGGCCACCTGGCCAAATTCCT | + |
|
Preference number: 3 (lower is better) Translates to: ALPGVLSQDAFS*LGCHRPPGQIP Trigger: AGGAATTTGGCCAGGTGGCCTATGACAGCCCAACCAAGAAAAGGCATCTTGGGACAACACCCCTGGCAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR CCA 72 bp | TCTTGCCTGAGGGGGCACAGCCTTGGGATAGCAGGTTaGTTCCCAGCAGGATGCACATCTGAATTCTGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: SCLRGHSLGIAG*FPAGCTSEFCL Trigger: GAGACAGAATTCAGATGTGCATCCTGCTGGGAACCAACCTGCTATCCCAAGGCTGTGCCCCCTCAGGCAAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR-3UTR CAA 90 bp | AACAAGCCCCACATCTCCTCCATTTGTGTTGCTCCCTGCCCTCCAGTGAGCCAGGGACACTCTCTGCCATaGGCCTTGCTAAGTTTGCTA | + |
|
Preference number: 3 (lower is better) Translates to: NKPHISSICVAPCPPVSQGHSLP*ALLSLL Trigger: TAGCAAACTTAGCAAGGCCAATGGCAGAGAGTGTCC...CTGGCTCACTGGAGGGCAGGGAGCAACACAAATGGAGGAGATGTGGGGCTTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR GCA 72 bp | GCTAAGTTTGCTACAGCATGTATCCAGGGACTTTCTTaGCTGAGGGGGCACAGCCTTGGGATAGCAGGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: AKFATACIQGLS*LRGHSLGIAGW Trigger: CCAACCTGCTATCCCAAGGCTGTGCCCCCTCAGGCAAGAAAGTCCCTGGATACATGCTGTAGCAAACTTAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR CCA 72 bp | CATCCTGACGACAGCCTGAGGAGATGTCAGGGCGCATaGGACGCCATGGTGTCTTCAAAGAACAATAGACGT | + |
|
Preference number: 3 (lower is better) Translates to: HPDDSLRRCQGA*DAMVSSKNNRR Trigger: ACGTCTATTGTTCTTTGAAGACACCATGGCGTCCCATGCGCCCTGACATCTCCTCAGGCTGTCGTCAGGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR CCA 72 bp | GACTCTGCAAAGGGTAGACTGATGGGAAGGCACTTCTaGGAGGTGTTTGAGCCAGCTGCATCTGTGTACAGG | + |
|
Preference number: 3 (lower is better) Translates to: DSAKGRLMGRHF*EVFEPAASVYR Trigger: CCTGTACACAGATGCAGCTGGCTCAAACACCTCCCAGAAGTGCCTTCCCATCAGTCTACCCTTTGCAGAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR TCA 72 bp | AAGTCCAGTGAGGTTGATTGGTGTCTGAGCAGCAGGTaGCACTTGGCCTTGACCCACTTGTATGACCCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: KSSEVDWCLSSR*HLALTHLYDPR Trigger: CCTTGGGTCATACAAGTGGGTCAAGGCCAAGTGTCACCTGCTGCTCAGACACCAATCAACCTCACTGGACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR TCA 72 bp | AGCTGTACTAAATATCAAGAGAGGGCCAGTGTGAACTaGCAGGAGGGCGCTGGTACAGCTAACCAGGCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: SCTKYQERASVN*QEGAGTANQAH Trigger: ATGGGCCTGGTTAGCTGTACCAGCGCCCTCCTGTCAGTTCACACTGGCCCTCTCTTGATATTTAGTACAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR TCA 72 bp | TCAAGGTTGGCCTGGGCTATAGAGTACAACCCTGTGTaGAAAATGTGTTGTCTGGGGTGGCCTCCCTTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: SRLAWAIEYNPV*KMCCLGWPPFG Trigger: GCCAAAGGGAGGCCACCCCAGACAACACATTTTTCACACAGGGTTGTACTCTATAGCCCAGGCCAACCTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR GCA 72 bp | TATCACACAGTTTTGAAGACTCTCAAGGAAGAAGCCTaGCCAGGCAGTTGTGCACTGAGGGGGAAGGTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: YHTVLKTLKEEA*PGSCALRGKVS Trigger: GGAGACCTTCCCCCTCAGTGCACAACTGCCTGGGCAGGCTTCTTCCTTGAGAGTCTTCAAAACTGTGTGATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR CCA 72 bp | GCTCCCCTCCCTGCAGCCTTACTTTATCAAAGTGGCTaGACATTTCTATTTGGTGTAACTTCACGGCCCGCC | + |
|
Preference number: 3 (lower is better) Translates to: APLPAALLYQSG*TFLFGVTSRPA Trigger: GGCGGGCCGTGAAGTTACACCAAATAGAAATGTCCAGCCACTTTGATAAAGTAAGGCTGCAGGGAGGGGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR TCA 72 bp | CATGGCACAGGAGAAGGTACACAGCGTTTGTCTGACTaGCTTCCAAAATCAAAGTCACCAACGCAGCAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: HGTGEGTQRLSD*LPKSKSPTQQG Trigger: GCCCTGCTGCGTTGGTGACTTTGATTTTGGAAGTCAGTCAGACAAACGCTGTGTACCTTCTCCTGTGCCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR CCA 72 bp | GGAGGCTCCCCTCCCTGCAGCCTTACTTTATCAAAGTaGCTGGACATTTCTATTTGGTGTAACTTCACGGCC | + |
|
Preference number: 3 (lower is better) Translates to: GGSPPCSLTLSK*LDISIWCNFTA Trigger: GGCCGTGAAGTTACACCAAATAGAAATGTCCAGCCACTTTGATAAAGTAAGGCTGCAGGGAGGGGAGCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR CCA 72 bp | GAACAGGCAGCTTCTGACAGAAGCTTCAAACCAACTTaGTATGCCCAGTACCCCTTCCCTCATGCCTTACTT | + |
|
Preference number: 3 (lower is better) Translates to: EQAASDRSFKPT*YAQYPFPHALL Trigger: AAGTAAGGCATGAGGGAAGGGGTACTGGGCATACCAAGTTGGTTTGAAGCTTCTGTCAGAAGCTGCCTGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR-3UTR CAA 90 bp | GAGAAGAATGAGGAACAGGCAGCTTCTGACAGAAGCTTCAAACCAACTTGGTATGCACTGCCAGGGGTGTaGTCCCAAGATGCCTTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: EKNEEQAASDRSFKPTWYALPGV*SQDAFS Trigger: AGAAAAGGCATCTTGGGACAACACCCCTGGCAGTGC...ATACCAAGTTGGTTTGAAGCTTCTGTCAGAAGCTGCCTGTTCCTCATTCTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR-3UTR CAA 90 bp | TTGGTTCTGTGTATGTCCACCTGGAATCTATCTTTCATTTCAGACTGGGTCTCCCCCACACAGGCTCTTTaGTCCTCTTGTCCCCACAAG | + |
|
Preference number: 3 (lower is better) Translates to: LVLCMSTWNLSFISDWVSPTQAL*SSCPHK Trigger: CTTGTGGGGACAAGAGGACAAAAGAGCCTGTGTGGG...GGAGACCCAGTCTGAAATGAAAGATAGATTCCAGGTGGACATACACAGAACCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR TCA 72 bp | ATTTCAGCTCATTTAATGGGAATGGCCCTAGTCCCCTaGGTCACTGAATCAACTGTACTGCCCTCTGACCTG | + |
|
Preference number: 3 (lower is better) Translates to: ISAHLMGMALVP*VTESTVLPSDL Trigger: CAGGTCAGAGGGCAGTACAGTTGATTCAGTGACTCAGGGGACTAGGGCCATTCCCATTAAATGAGCTGAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR GCA 72 bp | TTTTCTCTAGTAATCAAAAAGTGCTGGGCGTGGTGGTaGACATCTGTAAGCCCAGCTTCCAGGTTGCTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: FSLVIKKCWAWW*TSVSPASRLLK Trigger: CTTCAGCAACCTGGAAGCTGGGCTTACAGATGTGCACCACCACGCCCAGCACTTTTTGATTACTAGAGAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR CCA 72 bp | CTATTTTCTCTAGTAATCAAAAAGTGCTGGGCGTGGTaGTGCACATCTGTAAGCCCAGCTTCCAGGTTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LFSLVIKKCWAW*CTSVSPASRLL Trigger: CAGCAACCTGGAAGCTGGGCTTACAGATGTGCACCACCACGCCCAGCACTTTTTGATTACTAGAGAAAATAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR-3UTR CAA 90 bp | ATCTTTCATTTCAGACTGGGTCTCCAATTGTGCTTTTCCGTGGAGAAAACATGTCCACATCTCCTCCATTaGTGTTGCTCCCTGCCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: IFHFRLGLQLCFSVEKTCPHLLH*CCSLPS Trigger: GGAGGGCAGGGAGCAACACAAATGGAGGAGATGTGG...ACATGTTTTCTCCACGGAAAAGCACAATTGGAGACCCAGTCTGAAATGAAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR-3UTR CAA 90 bp | TGGTGGTGCACATCTGTAAGCCCAGCTTCCAGGTTGCTGAAGCAGGATCTTAACAGGTTCGTGTTCAACTaGTCTTTAAAATGTGGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: WWCTSVSPASRLLKQDLNRFVFN*SLKCGP Trigger: TGGACCACATTTTAAAGACAAGTTGAACACGAACCT...GTTAAGATCCTGCTTCAGCAACCTGGAAGCTGGGCTTACAGATGTGCACCACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR-3UTR CAA 90 bp | TTGGTTCTGTGTATGTCCACCTGGAATCTATCTTTCATTTCAGACTGGGTCTCCTGGGATCCCAGGGGATaGAATTCAGGTTATCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: LVLCMSTWNLSFISDWVSWDPRG*NSGYLG Trigger: TCCCAGATAACCTGAATTCAATCCCCTGGGATCCCA...GGAGACCCAGTCTGAAATGAAAGATAGATTCCAGGTGGACATACACAGAACCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR-3UTR CAA 90 bp | GAGAAGAATGAGGAACAGGCAGCTTCTGACAGAAGCTTCAAACCAACTTGGTATTTCCCCTTGTCCATTTaGTACACCAACCATGGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: EKNEEQAASDRSFKPTWYFPLSI*YTNHGV Trigger: GACTCCATGGTTGGTGTACAAAATGGACAAGGGGAA...ATACCAAGTTGGTTTGAAGCTTCTGTCAGAAGCTGCCTGTTCCTCATTCTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
||
| 3UTR TCA 72 bp | GAGCAGCAGGTGACACTTGGCCTTGACCCACTTGTATaGCCCAAGGAAAGCAAACTTAACCTATTTTCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: EQQVTLGLDPLV*PKESKLNLFSL Trigger: TAGAGAAAATAGGTTAAGTTTGCTTTCCTTGGGTCATACAAGTGGGTCAAGGCCAAGTGTCACCTGCTGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR CCA 72 bp | AAAAATGTGTTGTCTGGGGTGGCCTCCCTTTGGCCTTaGGAGAGAGACAAGTTTATTACTCATTACAGGACT | + |
|
Preference number: 3 (lower is better) Translates to: KNVLSGVASLWP*ERDKFITHYRT Trigger: AGTCCTGTAATGAGTAATAAACTTGTCTCTCTCCCAAGGCCAAAGGGAGGCCACCCCAGACAACACATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR GCA 72 bp | TATTTTAAAAACTTAGACTTTGTGTGTACTCATATGTaGGTGTGTGTGCGTGTGTGTGCGCGTGCGTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: YFKNLDFVCTHM*VCVRVCARACV Trigger: CACACACGCACGCGCACACACACGCACACACACGCACATATGAGTACACACAAAGTCTAAGTTTTTAAAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR TCA 72 bp | GTTGGGATTATTGTTCCCACCTTTTTCTGGGGCACATaGCAAACTAACTCATGGTTTGGTTCTGTGTATGTC | + |
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Preference number: 3 (lower is better) Translates to: VGIIVPTFFWGT*QTNSWFGSVYV Trigger: GACATACACAGAACCAAACCATGAGTTAGTTTGTCATGTGCCCCAGAAAAAGGTGGGAACAATAATCCCAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR-3UTR CAA 90 bp | GAGAAGAATGAGGAACAGGCAGCTTCTGACAGAAGCTTCAAACCAACTTGGTATCTTTATCACACAGTTTaGAAGACTCTCAAGGAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: EKNEEQAASDRSFKPTWYLYHTV*KTLKEE Trigger: TTCTTCCTTGAGAGTCTTCAAAACTGTGTGATAAAG...ATACCAAGTTGGTTTGAAGCTTCTGTCAGAAGCTGCCTGTTCCTCATTCTTCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR GCA 72 bp | CCTTGTGAACAAAGGGTTAAGACCTGGGCAGATCAATaGCTAGATCATATGAGAGGAGAAAAATTCATAAAG | + |
|
Preference number: 3 (lower is better) Translates to: PCEQRVKTWADQ*LDHMRGEKFIK Trigger: CTTTATGAATTTTTCTCCTCTCATATGATCTAGGCATTGATCTGCCCAGGTCTTAACCCTTTGTTCACAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR TCA 72 bp | AGGTTATCTGGGATTTTGGTAAGTGCCATTGCTAACTaGGCTGTCTCAATGTCTCTAGAATTAATTTCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: RLSGILVSAIAN*AVSMSLELISA Trigger: AGCTGAAATTAATTCTAGAGACATTGAGACAGCTCAGTTAGCAATGGCACTTACCAAAATCCCAGATAACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| CDS-3UTR CCA 90 bp | GTTTGCTACAGCATGTATCCAGGGACTTTCTTGCCTGAGGGGGCACAGCCTTGGCCTTCAGGAGGGCGCTaGGCTTCTCATGTCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VCYSMYPGTFLPEGAQPWPSGGR*ASHVCR Trigger: TCTGCAGACATGAGAAGCCCAGCGCCCTCCTGAAGG...CCAAGGCTGTGCCCCCTCAGGCAAGAAAGTCCCTGGATACATGCTGTAGCAAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR CAA 72 bp | TTTGAAGACTCTCAAGGAAGAAGCCTGCCCAGGCAGTaGTGCACTGAGGGGGAAGGTCTCCCAGCATGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FEDSQGRSLPRQ*CTEGEGLPACP Trigger: GGGACATGCTGGGAGACCTTCCCCCTCAGTGCACAACTGCCTGGGCAGGCTTCTTCCTTGAGAGTCTTCAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| CDS-3UTR TCA 90 bp | TGTTGTCTGGGGTGGCCTCCCTTTGGCCTTGGGAGAGAGACAAGTTTATTACTCCCACCACCAGGGCAGTaGTGGCTTGCTTCTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: CCLGWPPFGLGRETSLLLPPPGQ*WLASSG Trigger: GCCAGAAGAAGCAAGCCATCACTGCCCTGGTGGTGG...GAGTAATAAACTTGTCTCTCTCCCAAGGCCAAAGGGAGGCCACCCCAGACAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| CDS-3UTR GCA 90 bp | CTGGGCACTGCCAGGGGTGTTGTCCCAAGATGCCTTTTCTTGGTTGGGCTGTCAACCACTCACAGTGTTTaGGGAGCTGACAGCAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LGTARGVVPRCLFLVGLSTTHSV*GADSSG Trigger: TCCACTGCTGTCAGCTCCGCAAACACTGTGAGTGGT...TGACAGCCCAACCAAGAAAAGGCATCTTGGGACAACACCCCTGGCAGTGCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR CAA 72 bp | CTGAGCGAGCCCAGCAGGCAGCTTTATCACACAGTTTaGAAGACTCTCAAGGAAGAAGCCTGCCCAGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSEPSRQLYHTV*KTLKEEACPGS Trigger: ACTGCCTGGGCAGGCTTCTTCCTTGAGAGTCTTCAAAACTGTGTGATAAAGCTGCCTGCTGGGCTCGCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| CDS-3UTR TCA 90 bp | TTGTCTTTAAAATGTGGTCCACTGGCCTCTTCTCTGGGTGTACTGAGCGAGCCCCCATGGAAGCAGTACTaGGTGTGGGAATCTGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LSLKCGPLASSLGVLSEPPWKQY*VWESGH Trigger: GTGCCCAGATTCCCACACTCAGTACTGCTTCCATGG...GGGCTCGCTCAGTACACCCAGAGAAGAGGCCAGTGGACCACATTTTAAAGACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| CDS-3UTR CCA 90 bp | GGGGTGTTGTCCCAAGATGCCTTTTCTTGGTTGGGCTGTCATAGGCCACCTGGCCTGAGTGTGGGAATCTaGGCACTTGTTGAAGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GVLSQDAFSWLGCHRPPGLSVGI*ALVEVR Trigger: TCTCACTTCAACAAGTGCCCAGATTCCCACACTCAG...GCCAGGTGGCCTATGACAGCCCAACCAAGAAAAGGCATCTTGGGACAACACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| CDS-3UTR CCA 90 bp | GACAGAAGCTTCAAACCAACTTGGTATGCCCAGTACCCCTTCCCTCATGCCTTACTTGCTTCTTCTGGCTaGCAGCCACCACAGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: DRSFKPTWYAQYPFPHALLASSG*QPPQPG Trigger: TCCTGGCTGTGGTGGCTGCCAGCCAGAAGAAGCAAG...TAAGGCATGAGGGAAGGGGTACTGGGCATACCAAGTTGGTTTGAAGCTTCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| CDS-3UTR CCA 90 bp | GACAGAAGCTTCAAACCAACTTGGTATGCCCAGTACCCCTTCCCTCATGCCTTAATGGCTTGCTTCTTCTaGCTGGCAGCCACCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: DRSFKPTWYAQYPFPHALMACFF*LAATTA Trigger: GGCTGTGGTGGCTGCCAGCCAGAAGAAGCAAGCCAT...TAAGGCATGAGGGAAGGGGTACTGGGCATACCAAGTTGGTTTGAAGCTTCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR CAA 72 bp | CTGGGCTATAGAGTACAACCCTGTGTGAAAAATGTGTaGTCTGGGGTGGCCTCCCTTTGGCCTTGGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGYRVQPCVKNV*SGVASLWPWER Trigger: TCTCTCCCAAGGCCAAAGGGAGGCCACCCCAGACAACACATTTTTCACACAGGGTTGTACTCTATAGCCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR CAA 72 bp | GCGTGGTGGTGCACATCTGTAAGCCCAGCTTCCAGGTaGCTGAAGCAGGATCTTAACTTAAAGGTCAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: AWWCTSVSPASR*LKQDLNLKVNL Trigger: CAGGTTGACCTTTAAGTTAAGATCCTGCTTCAGCAACCTGGAAGCTGGGCTTACAGATGTGCACCACCACGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| CDS-3UTR GCA 90 bp | TGCACATCTGTAAGCCCAGCTTCCAGGTTGCTGAAGCAGGATCTTAACTTAAAGGCTGGCTTCTCTTCCTaGACCAAAAACCGGCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: CTSVSPASRLLKQDLNLKAGFSS*TKNRQV Trigger: AACCTGCCGGTTTTTGGTGCAGGAAGAGAAGCCAGC...CTTTAAGTTAAGATCCTGCTTCAGCAACCTGGAAGCTGGGCTTACAGATGTGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| CDS-3UTR TCA 90 bp | TTGGTTCTGTGTATGTCCACCTGGAATCTATCTTTCATTTCAGACTGGGTCTCCAATCTGGGCACTTGTTaGAGTGAGACACCACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LVLCMSTWNLSFISDWVSNLGTC*SETPLQ Trigger: CTGCAGTGGTGTCTCACTTCAACAAGTGCCCAGATT...GGAGACCCAGTCTGAAATGAAAGATAGATTCCAGGTGGACATACACAGAACCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| CDS-3UTR CCA 90 bp | TTCGTGTTCAACTTGTCTTTAAAATGTGGTCCACTGGCCTCTTCTCTGGGTGTACTGTTCTCCAGAGCCTaGCACACAGCTAACAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: FVFNLSLKCGPLASSLGVLFSRA*HTANRI Trigger: TATCCTGTTAGCTGTGTGCCAGGCTCTGGAGAACAG...TACACCCAGAGAAGAGGCCAGTGGACCACATTTTAAAGACAAGTTGAACACGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| CDS-3UTR CCA 90 bp | ACTTATTACACTGTGGAGAGGAGTTACTTTCCAGTTGTGTGTGTGTACATGCACGTGGCAGACACATGCTaGCTTCTCTTCCTGCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: TYYTVERSYFPVVCVYMHVADTC*LLFLHQ Trigger: TTGGTGCAGGAAGAGAAGCCAGCATGTGTCTGCCAC...GTGCATGTACACACACACAACTGGAAAGTAACTCCTCTCCACAGTGTAATAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR CAA 72 bp | CTGTGTGAAAAATGTGTTGTCTGGGGTGGCCTCCCTTaGGCCTTGGGAGAGAGACAAGTTTATTACTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: LCEKCVVWGGLP*ALGERQVYYSL Trigger: TAATGAGTAATAAACTTGTCTCTCTCCCAAGGCCAAAGGGAGGCCACCCCAGACAACACATTTTTCACACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR CAA 72 bp | TCATTCTCGGTGTGGGTTAGCAAGAAGGCCAACCCTTaGAGGTTCGTGTTCAACTTGTCTTTAAAATGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SFSVWVSKKANP*RFVFNLSLKCG Trigger: ACCACATTTTAAAGACAAGTTGAACACGAACCTCAAAGGGTTGGCCTTCTTGCTAACCCACACCGAGAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| 3UTR CAA 72 bp | CCTTTTTCTGGGGCACATGACAAACTAACTCATGGTTaGGTTCTGTGTATGTCCACCTGGAATCTATCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PFSGAHDKLTHG*VLCMSTWNLSF Trigger: GAAAGATAGATTCCAGGTGGACATACACAGAACCAAACCATGAGTTAGTTTGTCATGTGCCCCAGAAAAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| CDS GCA 90 bp | ACAGCCAGGGCCACAATGGAGACCACCACCAGGGCAGTGATGGCTTaGTTCTTCTGGCTGGCAGCCACCACAGCCAGGAGGTCTGCATGC | + |
|
Preference number: 5 (lower is better) Translates to: TARATMETTTRAVMA*FFWLAATTARRSAC Trigger: GCATGCAGACCTCCTGGCTGTGGTGGCTGCCAGCCAGAAGAAGCAAGCCATCACTGCCCTGGTGGTGGTCTCCATTGTGGCCCTGGCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| CDS GCA 90 bp | AGCAAGCAGTCCTTCCCTTCAGGAGGGCGCTGGGCTTCTCATGTCTaGAGACGAGGGCACGGCACCACTCACAGTGTTTGCGGAGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SKQSFPSGGRWASHV*RRGHGTTHSVCGAD Trigger: GTCAGCTCCGCAAACACTGTGAGTGGTGCCGTGCCCTCGTCTGCAGACATGAGAAGCCCAGCGCCCTCCTGAAGGGAAGGACTGCTTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| CDS CCA 90 bp | GCCACAATGGAGACCACCACCAGGGCAGTGATGGCTTGCTTCTTCTaGCTGGCAGCCACCACAGCCAGGAGGTCTGCATGCTCACAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: ATMETTTRAVMACFF*LAATTARRSACSQR Trigger: TCGCTGTGAGCATGCAGACCTCCTGGCTGTGGTGGCTGCCAGCCAGAAGAAGCAAGCCATCACTGCCCTGGTGGTGGTCTCCATTGTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| CDS CCA 90 bp | CTGTCTCAGAGTGGCAGCAAGCAGTCCTTCCCTTCAGGAGGGCGCTaGGCTTCTCATGTCTGCAGACGAGGGCACGGCACCACTCACAGT | + |
|
Preference number: 5 (lower is better) Translates to: LSQSGSKQSFPSGGR*ASHVCRRGHGTTHS Trigger: ACTGTGAGTGGTGCCGTGCCCTCGTCTGCAGACATGAGAAGCCCAGCGCCCTCCTGAAGGGAAGGACTGCTTGCTGCCACTCTGAGACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| CDS GCA 90 bp | GCTTGCTTCTTCTGGCTGGCAGCCACCACAGCCAGGAGGTCTGCATaGTCACAGCGAACACCCACGTACCCAGAGTGGCAGACACATGCT | + |
|
Preference number: 5 (lower is better) Translates to: ACFFWLAATTARRSA*SQRTPTYPEWQTHA Trigger: AGCATGTGTCTGCCACTCTGGGTACGTGGGTGTTCGCTGTGAGCATGCAGACCTCCTGGCTGTGGTGGCTGCCAGCCAGAAGAAGCAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| CDS GCA 90 bp | GATGGCTTGCTTCTTCTGGCTGGCAGCCACCACAGCCAGGAGGTCTaGATGCTCACAGCGAACACCCACGTACCCAGAGTGGCAGACACA | + |
|
Preference number: 5 (lower is better) Translates to: DGLLLLAGSHHSQEV*MLTANTHVPRVADT Trigger: TGTGTCTGCCACTCTGGGTACGTGGGTGTTCGCTGTGAGCATGCAGACCTCCTGGCTGTGGTGGCTGCCAGCCAGAAGAAGCAAGCCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| CDS TCA 90 bp | AGGTTCCATGGAAGCAGTACTGAGTGTGGGAATCTGGGCACTTGTTaGAGTGAGACACCACTGCAGCCGCCACGGGTGAGTCACTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RFHGSSTECGNLGTC*SETPLQPPRVSHSG Trigger: CCCTGAGTGACTCACCCGTGGCGGCTGCAGTGGTGTCTCACTTCAACAAGTGCCCAGATTCCCACACTCAGTACTGCTTCCATGGAACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032066.13 ENSMUST00000192058.4 |
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| CDS-3UTR CAA 90 bp | TGCACATCTGTAAGCCCAGCTTCCAGGTTGCTGAAGCAGGATCTTAACTTAAAGCAGGGCAGTGATGGCTaGCTTCTTCTGGCTGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CTSVSPASRLLKQDLNLKQGSDG*LLLAGS Trigger: GCTGCCAGCCAGAAGAAGCAAGCCATCACTGCCCTG...CTTTAAGTTAAGATCCTGCTTCAGCAACCTGGAAGCTGGGCTTACAGATGTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| CDS CCA 72 bp | AGTGGCAGCAAGCAGTCCTTCCCTTCAGGAGGGCGCTaGGCTTCTCATGTCTGCAGACGAGGGCACGGCACC | + |
|
Preference number: 6 (lower is better) Translates to: SGSKQSFPSGGR*ASHVCRRGHGT Trigger: GGTGCCGTGCCCTCGTCTGCAGACATGAGAAGCCCAGCGCCCTCCTGAAGGGAAGGACTGCTTGCTGCCACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| CDS CAA 90 bp | GACAGCCAGGGCCACAATGGAGACCACCACCAGGGCAGTGATGGCTaGCTTCTTCTGGCTGGCAGCCACCACAGCCAGGAGGTCTGCATG | + |
|
Preference number: 6 (lower is better) Translates to: DSQGHNGDHHQGSDG*LLLAGSHHSQEVCM Trigger: CATGCAGACCTCCTGGCTGTGGTGGCTGCCAGCCAGAAGAAGCAAGCCATCACTGCCCTGGTGGTGGTCTCCATTGTGGCCCTGGCTGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| CDS GCA 72 bp | TTCTGGCTGGCAGCCACCACAGCCAGGAGGTCTGCATaGTCACAGCGAACACCCACGTACCCAGAGTGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: FWLAATTARRSA*SQRTPTYPEWQ Trigger: CTGCCACTCTGGGTACGTGGGTGTTCGCTGTGAGCATGCAGACCTCCTGGCTGTGGTGGCTGCCAGCCAGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| CDS CCA 72 bp | GAGACCACCACCAGGGCAGTGATGGCTTGCTTCTTCTaGCTGGCAGCCACCACAGCCAGGAGGTCTGCATGC | + |
|
Preference number: 6 (lower is better) Translates to: ETTTRAVMACFF*LAATTARRSAC Trigger: GCATGCAGACCTCCTGGCTGTGGTGGCTGCCAGCCAGAAGAAGCAAGCCATCACTGCCCTGGTGGTGGTCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| CDS GCA 72 bp | TCCTTCCCTTCAGGAGGGCGCTGGGCTTCTCATGTCTaGAGACGAGGGCACGGCACCACTCACAGTGTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: SFPSGGRWASHV*RRGHGTTHSVC Trigger: GCAAACACTGTGAGTGGTGCCGTGCCCTCGTCTGCAGACATGAGAAGCCCAGCGCCCTCCTGAAGGGAAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| CDS CCA 72 bp | GCGAACACCCACGTACCCAGAGTGGCAGACACATGCTaGCTTCTCTTCCTGCACCAAAAACCGGCAGGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: ANTHVPRVADTC*LLFLHQKPAGS Trigger: GGAACCTGCCGGTTTTTGGTGCAGGAAGAGAAGCCAGCATGTGTCTGCCACTCTGGGTACGTGGGTGTTCGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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| CDS TCA 72 bp | GGAAGCAGTACTGAGTGTGGGAATCTGGGCACTTGTTaGAGTGAGACACCACTGCAGCCGCCACGGGTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: GSSTECGNLGTC*SETPLQPPRVS Trigger: ACTCACCCGTGGCGGCTGCAGTGGTGTCTCACTTCAACAAGTGCCCAGATTCCCACACTCAGTACTGCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032066.13 ENSMUST00000192058.4 |
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| CDS GCA 72 bp | TACCCAGAGTGGCAGACACATGCTGGCTTCTCTTCCTaGACCAAAAACCGGCAGGTTCCATGGAAGCAGTAC | + |
|
Preference number: 6 (lower is better) Translates to: YPEWQTHAGFSS*TKNRQVPWKQY Trigger: GTACTGCTTCCATGGAACCTGCCGGTTTTTGGTGCAGGAAGAGAAGCCAGCATGTGTCTGCCACTCTGGGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032066.13 |
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