RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TG (Mus musculus)

Ensembl gene IDs: ENSMUSG00000053469

Ensembl transcript IDs: ENSMUST00000065916.14, ENSMUST00000166403.2, ENSMUST00000171045.9

Found 264 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TACTTTATTGAAAGCAAATGGTTGCTATATATAGTAAAATCACCATaGCAGGCAGTTCAGGATGGAACTGGCAGGGAAGATGGGAGGTCT +
Preference number: 1 (lower is better)
Translates to: YFIESKWLLYIVKSP*QAVQDGTGREDGRS
Trigger: AGACCTCCCATCTTCCCTGCCAGTTCCATCCTGAACTGCCTGTCATGGTGATTTTACTATATATAGCAACCATTTGCTTTCAATAAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065916.14
ENSMUST00000166403.2
ENSMUST00000171045.9
3UTR TCA 72 bp GAAAGCAAATGGTTGCTATATATAGTAAAATCACCATaGCAGGCAGTTCAGGATGGAACTGGCAGGGAAGAT +
Preference number: 3 (lower is better)
Translates to: ESKWLLYIVKSP*QAVQDGTGRED
Trigger: ATCTTCCCTGCCAGTTCCATCCTGAACTGCCTGTCATGGTGATTTTACTATATATAGCAACCATTTGCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065916.14
ENSMUST00000166403.2
ENSMUST00000171045.9
CDS TCA 90 bp TGTCACCCAGTGCTGACTCTCCAGGCTACAAATCAGTGGCCCTGGTaGAAACGCACTCCGGAGGCCCTGGCGGCACAGCAGCTGGCACTG +
Preference number: 5 (lower is better)
Translates to: CHPVLTLQATNQWPW*KRTPEALAAQQLAL
Trigger: CAGTGCCAGCTGCTGTGCCGCCAGGGCCTCCGGAGTGCGTTTTCACCAGGGCCACTGATTTGTAGCCTGGAGAGTCAGCACTGGGTGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS TCA 90 bp GAAAACGCACTCCGGAGGCCCTGGCGGCACAGCAGCTGGCACTGCTaGACAGTCGTCACTCCTGAGCTAGAGGCTGTCTCGCAGAAGATC +
Preference number: 5 (lower is better)
Translates to: ENALRRPWRHSSWHC*TVVTPELEAVSQKI
Trigger: GATCTTCTGCGAGACAGCCTCTAGCTCAGGAGTGACGACTGTTCAGCAGTGCCAGCTGCTGTGCCGCCAGGGCCTCCGGAGTGCGTTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS GCA 90 bp CAGAGAATGGCAGTGGACACTGTGGGCTTTCACAGGCAGGCTGGGTaGCTACCACACGGGTCCCTGGCACTTCCTCTCCACTTCCCAGGA +
Preference number: 5 (lower is better)
Translates to: QRMAVDTVGFHRQAG*LPHGSLALPLHFPG
Trigger: TCCTGGGAAGTGGAGAGGAAGTGCCAGGGACCCGTGTGGTAGGCACCCAGCCTGCCTGTGAAAGCCCACAGTGTCCACTGCCATTCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS TCA 90 bp GCCCTGGCGGCACAGCAGCTGGCACTGCTGAACAGTCGTCACTCCTaGGCTAGAGGCTGTCTCGCAGAAGATCACTCCATCAGCCACATC +
Preference number: 5 (lower is better)
Translates to: ALAAQQLALLNSRHS*ARGCLAEDHSISHI
Trigger: GATGTGGCTGATGGAGTGATCTTCTGCGAGACAGCCTCTAGCTCAGGAGTGACGACTGTTCAGCAGTGCCAGCTGCTGTGCCGCCAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS TCA 90 bp TCCAGTGGTGATGGTTGTTCTGCCCCTTGGGCATGGGATGCAGGCTaGGCTGCCTGCCTGTTCTTGGTAGGTGCCAGCAGGACAGGGAGT +
Preference number: 5 (lower is better)
Translates to: SSGDGCSAPWAWDAG*AACLFLVGASRTGS
Trigger: ACTCCCTGTCCTGCTGGCACCTACCAAGAACAGGCAGGCAGCTCAGCCTGCATCCCATGCCCAAGGGGCAGAACAACCATCACCACTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 90 bp CTCTGGTGCCCGGAAGCGGTTGTCTGCCAAGGGTGGGGCAGCATATaGAACTCCAAGGAACCGGTATACTTGCTTCCAGGCAGTGCCCAC +
Preference number: 5 (lower is better)
Translates to: LWCPEAVVCQGWGSI*NSKEPVYLLPGSAH
Trigger: GTGGGCACTGCCTGGAAGCAAGTATACCGGTTCCTTGGAGTTCCATATGCTGCCCCACCCTTGGCAGACAACCGCTTCCGGGCACCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS GCA 90 bp GCCCTGGGCCAAGTCACATTGCACTGGGGAGAAGGCTCCATCCAGTaGCTCACAGACTGGAGAGTAGCCAAGACCCACTTTCCTGGACAG +
Preference number: 5 (lower is better)
Translates to: ALGQVTLHWGEGSIQ*LTDWRVAKTHFPGQ
Trigger: CTGTCCAGGAAAGTGGGTCTTGGCTACTCTCCAGTCTGTGAGGCACTGGATGGAGCCTTCTCCCCAGTGCAATGTGACTTGGCCCAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 90 bp TCCTACTCCATGGAGGAGACGCCGGTTTCTTATCTCACAGCTCCTTaGACACCGAGTTGGCCTGCCCTGCTGGCGGGTGCCATACACTTC +
Preference number: 5 (lower is better)
Translates to: SYSMEETPVSYLTAP*TPSWPALLAGAIHF
Trigger: GAAGTGTATGGCACCCGCCAGCAGGGCAGGCCAACTCGGTGTCCAAGGAGCTGTGAGATAAGAAACCGGCGTCTCCTCCATGGAGTAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 90 bp TTGCATGGTCTGCCACAGCTGAGGCCTTTGACAGGCTCGGGGTGGTaGCAGTGTCACCCAGTGCTGACTCTCCAGGCTACAAATCAGTGG +
Preference number: 5 (lower is better)
Translates to: LHGLPQLRPLTGSGW*QCHPVLTLQATNQW
Trigger: CCACTGATTTGTAGCCTGGAGAGTCAGCACTGGGTGACACTGCCACCACCCCGAGCCTGTCAAAGGCCTCAGCTGTGGCAGACCATGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 90 bp TCCAACCTCCTTTGCCAAGGCTGCAGCTTGCTGTTGGGCCCTCTCTaGGCTGATAATTGCAGCCGGGGACAGTGCAGAGCCTCCCATAAG +
Preference number: 5 (lower is better)
Translates to: SNLLCQGCSLLLGPL*ADNCSRGQCRASHK
Trigger: CTTATGGGAGGCTCTGCACTGTCCCCGGCTGCAATTATCAGCCCAGAGAGGGCCCAACAGCAAGCTGCAGCCTTGGCAAAGGAGGTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS GCA 90 bp CTGAGCTGCCTGCCTGTTCTTGGTAGGTGCCAGCAGGACAGGGAGTaGATCGCCCATCCTGAGAGAAGCTTCCTTCAGGGCATTTCACAC +
Preference number: 5 (lower is better)
Translates to: LSCLPVLGRCQQDRE*IAHPERSFLQGISH
Trigger: GTGTGAAATGCCCTGAAGGAAGCTTCTCTCAGGATGGGCGATGCACTCCCTGTCCTGCTGGCACCTACCAAGAACAGGCAGGCAGCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS GCA 90 bp CAGTCTTCATTGATTTGTGGAGGTGTGGGGGTACGGGTACCTGGCTaGCAGCAGCTGGCCCTTGGCTTGGTAGCATCCCATGAACCTGTC +
Preference number: 5 (lower is better)
Translates to: QSSLICGGVGVRVPG*QQLALGLVASHEPV
Trigger: GACAGGTTCATGGGATGCTACCAAGCCAAGGGCCAGCTGCTGGCAGCCAGGTACCCGTACCCCCACACCTCCACAAATCAATGAAGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS GCA 90 bp GATGAGAAGGTGTATGCTGGCCACATCAGCCCCACTACGGTCTGCTaGCAGTGTCACACGCTGAGGGTCCCCACCAAATGCTCCAATGTG +
Preference number: 5 (lower is better)
Translates to: DEKVYAGHISPTTVC*QCHTLRVPTKCSNV
Trigger: CACATTGGAGCATTTGGTGGGGACCCTCAGCGTGTGACACTGGCAGCAGACCGTAGTGGGGCTGATGTGGCCAGCATACACCTTCTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS GCA 90 bp GCTGATGAGAAGGTGTATGCTGGCCACATCAGCCCCACTACGGTCTaGTGCCAGTGTCACACGCTGAGGGTCCCCACCAAATGCTCCAAT +
Preference number: 5 (lower is better)
Translates to: ADEKVYAGHISPTTV*CQCHTLRVPTKCSN
Trigger: ATTGGAGCATTTGGTGGGGACCCTCAGCGTGTGACACTGGCAGCAGACCGTAGTGGGGCTGATGTGGCCAGCATACACCTTCTCATCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS CCA 90 bp TCCCCATCTGCAGTGCACTGGGGTGGTGACCTGTCTCCTACTCCATaGAGGAGACGCCGGTTTCTTATCTCACAGCTCCTTGGACACCGA +
Preference number: 5 (lower is better)
Translates to: SPSAVHWGGDLSPTP*RRRRFLISQLLGHR
Trigger: TCGGTGTCCAAGGAGCTGTGAGATAAGAAACCGGCGTCTCCTCCATGGAGTAGGAGACAGGTCACCACCCCAGTGCACTGCAGATGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 90 bp TCCACTGGCCACTGGCACTGCACTGAGGGATGTAGACATTGGAGATaGAGGGCACCATGCTGGAGTTCGAGAGCAGAACCCCTACTACCC +
Preference number: 5 (lower is better)
Translates to: STGHWHCTEGCRHWR*RAPCWSSRAEPLLP
Trigger: GGGTAGTAGGGGTTCTGCTCTCGAACTCCAGCATGGTGCCCTCCATCTCCAATGTCTACATCCCTCAGTGCAGTGCCAGTGGCCAGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 90 bp CATGCCTCCACTGGCCACTGGCACTGCACTGAGGGATGTAGACATTaGAGATGGAGGGCACCATGCTGGAGTTCGAGAGCAGAACCCCTA +
Preference number: 5 (lower is better)
Translates to: HASTGHWHCTEGCRH*RWRAPCWSSRAEPL
Trigger: TAGGGGTTCTGCTCTCGAACTCCAGCATGGTGCCCTCCATCTCCAATGTCTACATCCCTCAGTGCAGTGCCAGTGGCCAGTGGAGGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 90 bp AGTTTGCATGGTCTGCCACAGCTGAGGCCTTTGACAGGCTCGGGGTaGTGGCAGTGTCACCCAGTGCTGACTCTCCAGGCTACAAATCAG +
Preference number: 5 (lower is better)
Translates to: SLHGLPQLRPLTGSG*WQCHPVLTLQATNQ
Trigger: CTGATTTGTAGCCTGGAGAGTCAGCACTGGGTGACACTGCCACCACCCCGAGCCTGTCAAAGGCCTCAGCTGTGGCAGACCATGCAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS TCA 90 bp TCCTCACATGGGCCAGGACATGCTGGGATCTCGCCTGGCTTAGTCTaGGTACCATCCAGTTTCTGGCCAGCCTCATCCACACACCAACAG +
Preference number: 5 (lower is better)
Translates to: SSHGPGHAGISPGLV*VPSSFWPASSTHQQ
Trigger: CTGTTGGTGTGTGGATGAGGCTGGCCAGAAACTGGATGGTACTCAGACTAAGCCAGGCGAGATCCCAGCATGTCCTGGCCCATGTGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS TCA 90 bp CTGGACAGGGCTCTGCTCTTGAGGACATCACAGAGGCCAGGACACTaGGCACTGCCATTTGTGTTCACTGGCATCCCTTCTCCTGAGGCT +
Preference number: 5 (lower is better)
Translates to: LDRALLLRTSQRPGH*ALPFVFTGIPSPEA
Trigger: AGCCTCAGGAGAAGGGATGCCAGTGAACACAAATGGCAGTGCTCAGTGTCCTGGCCTCTGTGATGTCCTCAAGAGCAGAGCCCTGTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS GCA 90 bp CTGTCCCAGCATGGCACTGCACAGGTTCCCAGCCTCCAATCATATTaGATTGTGGCATGTAGGGCCCTGACCACAGAAGACTGGCTGCTC +
Preference number: 5 (lower is better)
Translates to: LSQHGTAQVPSLQSY*IVACRALTTEDWLL
Trigger: GAGCAGCCAGTCTTCTGTGGTCAGGGCCCTACATGCCACAATGCAATATGATTGGAGGCTGGGAACCTGTGCAGTGCCATGCTGGGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 90 bp TTTCTTATCTCACAGCTCCTTGGACACCGAGTTGGCCTGCCCTGCTaGCGGGTGCCATACACTTCCATCCCCTCTGTGTCTACACACCAG +
Preference number: 5 (lower is better)
Translates to: FLISQLLGHRVGLPC*RVPYTSIPSVSTHQ
Trigger: CTGGTGTGTAGACACAGAGGGGATGGAAGTGTATGGCACCCGCCAGCAGGGCAGGCCAACTCGGTGTCCAAGGAGCTGTGAGATAAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 90 bp GTCACATTGCACTGGGGAGAAGGCTCCATCCAGTGCCTCACAGACTaGAGAGTAGCCAAGACCCACTTTCCTGGACAGGGCTCTGCTCTT +
Preference number: 5 (lower is better)
Translates to: VTLHWGEGSIQCLTD*RVAKTHFPGQGSAL
Trigger: AAGAGCAGAGCCCTGTCCAGGAAAGTGGGTCTTGGCTACTCTCCAGTCTGTGAGGCACTGGATGGAGCCTTCTCCCCAGTGCAATGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 90 bp GGCCTGCAGCAAGCCGGAGTAGTCAACACTGCACATCTTTCCTGGTaGGAGCAGGAGCTGGAAGTGTGCTTGAGTTTGCATGGTCTGCCA +
Preference number: 5 (lower is better)
Translates to: GLQQAGVVNTAHLSW*EQELEVCLSLHGLP
Trigger: TGGCAGACCATGCAAACTCAAGCACACTTCCAGCTCCTGCTCCCACCAGGAAAGATGTGCAGTGTTGACTACTCCGGCTTGCTGCAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS TCA 90 bp AGGTTCCCAGCCTCCAATCATATTGCATTGTGGCATGTAGGGCCCTaGCCACAGAAGACTGGCTGCTCCATCGGACTTTCCCAGGGAAGC +
Preference number: 5 (lower is better)
Translates to: RFPASNHIALWHVGP*PQKTGCSIGLSQGS
Trigger: GCTTCCCTGGGAAAGTCCGATGGAGCAGCCAGTCTTCTGTGGTCAGGGCCCTACATGCCACAATGCAATATGATTGGAGGCTGGGAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS TCA 90 bp CTGGAGAGTAGCCAAGACCCACTTTCCTGGACAGGGCTCTGCTCTTaGGGACATCACAGAGGCCAGGACACTGAGCACTGCCATTTGTGT +
Preference number: 5 (lower is better)
Translates to: LESSQDPLSWTGLCS*GHHRGQDTEHCHLC
Trigger: ACACAAATGGCAGTGCTCAGTGTCCTGGCCTCTGTGATGTCCTCAAGAGCAGAGCCCTGTCCAGGAAAGTGGGTCTTGGCTACTCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS TCA 90 bp TTACCTGGATCTGGCAGAAGCCACGGGCTATCAGCTCATCCAGTATaGAGACCTGGAAGGCCTGCAGCAAGCCGGAGTAGTCAACACTGC +
Preference number: 5 (lower is better)
Translates to: LPGSGRSHGLSAHPV*RPGRPAASRSSQHC
Trigger: GCAGTGTTGACTACTCCGGCTTGCTGCAGGCCTTCCAGGTCTTCATACTGGATGAGCTGATAGCCCGTGGCTTCTGCCAGATCCAGGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS TCA 90 bp ACAACCCCAGGCTGGATCTGCAGGGTAGTGACAAGGCAGTCCTGGTaGCGGGAACATTGCTGTAAGCAGAAGTCTTGGGCCATGGAGAAG +
Preference number: 5 (lower is better)
Translates to: TTPGWICRVVTRQSW*REHCCKQKSWAMEK
Trigger: CTTCTCCATGGCCCAAGACTTCTGCTTACAGCAATGTTCCCGTCACCAGGACTGCCTTGTCACTACCCTGCAGATCCAGCCTGGGGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS GCA 90 bp TTGTGTAGCTGGCAGAAGGACAGACAAACTGTTGGCCTCCCCAGCTaGCTGCTGCCAGGTACTTCTCTGCCATCAGAATCCACACACCAG +
Preference number: 5 (lower is better)
Translates to: LCSWQKDRQTVGLPS*LLPGTSLPSESTHQ
Trigger: CTGGTGTGTGGATTCTGATGGCAGAGAAGTACCTGGCAGCAGGCAGCTGGGGAGGCCAACAGTTTGTCTGTCCTTCTGCCAGCTACACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS GCA 90 bp AAAATGGGCTCCTGGGCACACCGAGAAAGGCACCACAGGTTTGCCTaGTCTGCTGAAAACAGGTGTGTGAAGAGCCAGTACTGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: KMGSWAHRERHHRFA*SAENRCVKSQYCWL
Trigger: CAGCCAGCAGTACTGGCTCTTCACACACCTGTTTTCAGCAGAGCAGGCAAACCTGTGGTGCCTTTCTCGGTGTGCCCAGGAGCCCATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS CCA 90 bp ACAAACTTGCACTGGACAGGCATAAACTCCCCATCTGCAGTGCACTaGGGTGGTGACCTGTCTCCTACTCCATGGAGGAGACGCCGGTTT +
Preference number: 5 (lower is better)
Translates to: TNLHWTGINSPSAVH*GGDLSPTPWRRRRF
Trigger: AAACCGGCGTCTCCTCCATGGAGTAGGAGACAGGTCACCACCCCAGTGCACTGCAGATGGGGAGTTTATGCCTGTCCAGTGCAAGTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 90 bp CGAACGCAGGAGTCCAGAGTCAACAAAGAGTTCCTTGATTCTGGGTaGGCAGGATGTGTCCGATCTGACACCACTCACAGGAGCGAGCCT +
Preference number: 5 (lower is better)
Translates to: RTQESRVNKEFLDSG*AGCVRSDTTHRSEP
Trigger: AGGCTCGCTCCTGTGAGTGGTGTCAGATCGGACACATCCTGCCCACCCAGAATCAAGGAACTCTTTGTTGACTCTGGACTCCTGCGTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 90 bp AAGCATCCCGGGATGGGAATTGGGGAGGAAGGTCAAGCTCCTCACTaGTCAGCTGGATTCCCTTGGCCACTAAGAAACTCTCTCCCAGTG +
Preference number: 5 (lower is better)
Translates to: KHPGMGIGEEGQAPH*SAGFPWPLRNSLPV
Trigger: CACTGGGAGAGAGTTTCTTAGTGGCCAAGGGAATCCAGCTGACCAGTGAGGAGCTTGACCTTCCTCCCCAATTCCCATCCCGGGATGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 90 bp CTCTCCCGTCTGGAGGCAGACTGGTATGAACAGATCTCCCGGGCCTaGATTTCTTTGGGGTCCAGCCTGTTTCCATGCAGAAATCAACCC +
Preference number: 5 (lower is better)
Translates to: LSRLEADWYEQISRA*ISLGSSLFPCRNQP
Trigger: GGGTTGATTTCTGCATGGAAACAGGCTGGACCCCAAAGAAATCCAGGCCCGGGAGATCTGTTCATACCAGTCTGCCTCCAGACGGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 90 bp GAAGGCCTGCAGCAAGCCGGAGTAGTCAACACTGCACATCTTTCCTaGTGGGAGCAGGAGCTGGAAGTGTGCTTGAGTTTGCATGGTCTG +
Preference number: 5 (lower is better)
Translates to: EGLQQAGVVNTAHLS*WEQELEVCLSLHGL
Trigger: CAGACCATGCAAACTCAAGCACACTTCCAGCTCCTGCTCCCACCAGGAAAGATGTGCAGTGTTGACTACTCCGGCTTGCTGCAGGCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 90 bp CGCTGTCCACGCAGAAAACTTCCCCACTGTCCCTGTTCTTCTGGCTaGCTTGGTACTGACCATTCTGGTCACACTGTAGGCCAGCCTCAT +
Preference number: 5 (lower is better)
Translates to: RCPRRKLPHCPCSSG*LGTDHSGHTVGQPH
Trigger: ATGAGGCTGGCCTACAGTGTGACCAGAATGGTCAGTACCAAGCCAGCCAGAAGAACAGGGACAGTGGGGAAGTTTTCTGCGTGGACAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 90 bp CCAATTCAAGACCTCTGGTGCCCGGAAGCGGTTGTCTGCCAAGGGTaGGGCAGCATATGGAACTCCAAGGAACCGGTATACTTGCTTCCA +
Preference number: 5 (lower is better)
Translates to: PIQDLWCPEAVVCQG*GSIWNSKEPVYLLP
Trigger: TGGAAGCAAGTATACCGGTTCCTTGGAGTTCCATATGCTGCCCCACCCTTGGCAGACAACCGCTTCCGGGCACCAGAGGTCTTGAATTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS CCA 90 bp GGGTGGCATTCTCCAGTGCCCGAGAGAAGGAGGCATAGTCGTCTGTaGAGTGCTCCAAGGAGTAATACCATACAGCAGCAGCAAGGATGC +
Preference number: 5 (lower is better)
Translates to: GWHSPVPERRRHSRL*SAPRSNTIQQQQGC
Trigger: GCATCCTTGCTGCTGCTGTATGGTATTACTCCTTGGAGCACTCCACAGACGACTATGCCTCCTTCTCTCGGGCACTGGAGAATGCCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065916.14
ENSMUST00000166403.2
ENSMUST00000171045.9
CDS TCA 90 bp TTCATTAGCAGTGCGGCTGGGGTCAGTTCCTGGCCATCACCGTTCTaGGTCTTCCATCGTTCATACCACTCAAAGACCTGCTCATGGGGC +
Preference number: 5 (lower is better)
Translates to: FISSAAGVSSWPSPF*VFHRSYHSKTCSWG
Trigger: GCCCCATGAGCAGGTCTTTGAGTGGTATGAACGATGGAAGACTCAGAACGGTGATGGCCAGGAACTGACCCCAGCCGCACTGCTAATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS TCA 90 bp CGGCTCCCCTGGTCATATGTCACCCCAGCACATGTAGCATTGGCCTaGGTAGCAGAGGTATCCCTCCAGTCATTGATGTGGCAAAGCAGA +
Preference number: 5 (lower is better)
Translates to: RLPWSYVTPAHVALA*VAEVSLQSLMWQSR
Trigger: TCTGCTTTGCCACATCAATGACTGGAGGGATACCTCTGCTACTCAGGCCAATGCTACATGTGCTGGGGTGACATATGACCAGGGGAGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS TCA 90 bp ACTTGCTTCCAGGCAGTGCCCACCTTGATGACCTGGGACCCACCCTaGAGCTGGCCAAAGGAATCAATGCGTACAGAAGGTGTGGATGTT +
Preference number: 5 (lower is better)
Translates to: TCFQAVPTLMTWDPP*SWPKESMRTEGVDV
Trigger: AACATCCACACCTTCTGTACGCATTGATTCCTTTGGCCAGCTTCAGGGTGGGTCCCAGGTCATCAAGGTGGGCACTGCCTGGAAGCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS TCA 90 bp GCAATTCTAGGCTGCCATGGCCATAGCTTTCGGGGACATGGTACATaGAGACATTTCCACGGGTTCTCCTTGCCCAGAGGCTGGCCATGT +
Preference number: 5 (lower is better)
Translates to: AILGCHGHSFRGHGT*RHFHGFSLPRGWPC
Trigger: ACATGGCCAGCCTCTGGGCAAGGAGAACCCGTGGAAATGTCTTCATGTACCATGTCCCCGAAAGCTATGGCCATGGCAGCCTAGAATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065916.14
ENSMUST00000166403.2
ENSMUST00000171045.9
CDS GCA 90 bp TGGCACTGCACTGAGGGATGTAGACATTGGAGATGGAGGGCACCATaGTGGAGTTCGAGAGCAGAACCCCTACTACCCCAAGGAAAGCTT +
Preference number: 5 (lower is better)
Translates to: WHCTEGCRHWRWRAP*WSSRAEPLLPQGKL
Trigger: AAGCTTTCCTTGGGGTAGTAGGGGTTCTGCTCTCGAACTCCAGCATGGTGCCCTCCATCTCCAATGTCTACATCCCTCAGTGCAGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS GCA 90 bp TCTCCTGAGGCTGGATCCACACACCATGTTCCTGTCCCTGATGTCTaGTTCCTGACATACTCTCCCGTCTGGAGGCAGACTGGTATGAAC +
Preference number: 5 (lower is better)
Translates to: SPEAGSTHHVPVPDV*FLTYSPVWRQTGMN
Trigger: GTTCATACCAGTCTGCCTCCAGACGGGAGAGTATGTCAGGAAGCAGACATCAGGGACAGGAACATGGTGTGTGGATCCAGCCTCAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS GCA 90 bp CTGCAAAGCGCCCAAGGAGATCCTGGCCCGTTACCGCCCTTTCAATaGTGTACAAATCTGGAAGTGAGCCCACTGAGATGTCCTCAAGCT +
Preference number: 5 (lower is better)
Translates to: LQSAQGDPGPLPPFQ*CTNLEVSPLRCPQA
Trigger: AGCTTGAGGACATCTCAGTGGGCTCACTTCCAGATTTGTACAGCATTGAAAGGGCGGTAACGGGCCAGGATCTCCTTGGGCGCTTTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS GCA 90 bp TGGTGTCCGCTGAGAATGTCTTGGAGTCCAGATGAAGCTGGAACCTaGCACTTTGGATCAGATCTGCAAAGCGCCCAAGGAGATCCTGGC +
Preference number: 5 (lower is better)
Translates to: WCPLRMSWSPDEAGT*HFGSDLQSAQGDPG
Trigger: GCCAGGATCTCCTTGGGCGCTTTGCAGATCTGATCCAAAGTGGCAGGTTCCAGCTTCATCTGGACTCCAAGACATTCTCAGCGGACACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS GCA 90 bp GTAAGGAAGCTGCAGGCCTCATCATTTGCACAATCTGTCAAGCACTaGACCAGCGGGGAGTCAGCACTGGGGACACTGGACTTGACTATC +
Preference number: 5 (lower is better)
Translates to: VRKLQASSFAQSVKH*TSGESALGTLDLTI
Trigger: GATAGTCAAGTCCAGTGTCCCCAGTGCTGACTCCCCGCTGGTGCAGTGCTTGACAGATTGTGCAAATGATGAGGCCTGCAGCTTCCTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS GCA 90 bp GACCTGCTGGAAGCTGGTAAAGCTGTCTTGAGTTCCTTCCAAGAGTaGCAGACCCTGCAGGAACTCTTGGCCTCCCAGACTCAAGGTCAT +
Preference number: 5 (lower is better)
Translates to: DLLEAGKAVLSSFQE*QTLQELLASQTQGH
Trigger: ATGACCTTGAGTCTGGGAGGCCAAGAGTTCCTGCAGGGTCTGGCACTCTTGGAAGGAACTCAAGACAGCTTTACCAGCTTCCAGCAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS GCA 90 bp AGGGTCTGCCAAGAGTCCGAAGTAACCTTCTCCTCAGTGAGGGATTaGAGGGCAGCAGAAGGGCAGAAGCTAGGAGTGTCACTCCATACA +
Preference number: 5 (lower is better)
Translates to: RVCQESEVTFSSVRD*RAAEGQKLGVSLHT
Trigger: TGTATGGAGTGACACTCCTAGCTTCTGCCCTTCTGCTGCCCTGCAATCCCTCACTGAGGAGAAGGTTACTTCGGACTCTTGGCAGACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS GCA 90 bp CTGTGGAGTGCTCCAAGGAGTAATACCATACAGCAGCAGCAAGGATaGGGGCATCTGAGTCCTCACCACCGAGTGAATTCTGCAGTGCCT +
Preference number: 5 (lower is better)
Translates to: LWSAPRSNTIQQQQG*GHLSPHHRVNSAVP
Trigger: AGGCACTGCAGAATTCACTCGGTGGTGAGGACTCAGATGCCCGCATCCTTGCTGCTGCTGTATGGTATTACTCCTTGGAGCACTCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065916.14
ENSMUST00000166403.2
ENSMUST00000171045.9
CDS CCA 90 bp AAGTTTCACTTCCTCACATGGGCCAGGACATGCTGGGATCTCGCCTaGCTTAGTCTGAGTACCATCCAGTTTCTGGCCAGCCTCATCCAC +
Preference number: 5 (lower is better)
Translates to: KFHFLTWARTCWDLA*LSLSTIQFLASLIH
Trigger: GTGGATGAGGCTGGCCAGAAACTGGATGGTACTCAGACTAAGCCAGGCGAGATCCCAGCATGTCCTGGCCCATGTGAGGAAGTGAAACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 90 bp TCCATGCAGAAATCAACCCACTTGCTCTGGATAGCTCACAGTTTGTaGGACACTGGGGCATCTGTGAGGAGCGTGACATCAGCGAGCCTG +
Preference number: 5 (lower is better)
Translates to: SMQKSTHLLWIAHSL*DTGASVRSVTSASL
Trigger: CAGGCTCGCTGATGTCACGCTCCTCACAGATGCCCCAGTGTCCCACAAACTGTGAGCTATCCAGAGCAAGTGGGTTGATTTCTGCATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 90 bp TCCTTCAGGGCATTTCACACAGCCCAGAGCATCCTGTCTGGTGGTTaGGACTCTGTAGAACCCTTCCATACATCCAAGCTGAGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: SFRAFHTAQSILSGG*DSVEPFHTSKLSPG
Trigger: CCCAGGACTCAGCTTGGATGTATGGAAGGGTTCTACAGAGTCCCAACCACCAGACAGGATGCTCTGGGCTGTGTGAAATGCCCTGAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS TCA 90 bp CTCTCTGCTTTTCACACTTGGTGGGACATCTTGGGCGTCCACCTCTaGCTCTCGAGCCATCAAGTTCTTTGCCTCGGGAATCTACACACC +
Preference number: 5 (lower is better)
Translates to: LSAFHTWWDILGVHL*LSSHQVLCLGNLHT
Trigger: GGTGTGTAGATTCCCGAGGCAAAGAACTTGATGGCTCGAGAGTCAGAGGTGGACGCCCAAGATGTCCCACCAAGTGTGAAAAGCAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 90 bp TTCTCTCTTTGTAGCTCACAGGGGCGGAGTGGCTGTGCATCTACCTaGTACTCAAAGATGTTGGCTGCTACCAGGCAGACTGAGCTCAAC +
Preference number: 5 (lower is better)
Translates to: FSLCSSQGRSGCAST*YSKMLAATRQTELN
Trigger: GTTGAGCTCAGTCTGCCTGGTAGCAGCCAACATCTTTGAGTACCAGGTAGATGCACAGCCACTCCGCCCCTGTGAGCTACAAAGAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 90 bp GCTTTGCATCTGAGCTCTCTGCTTTTCACACTTGGTGGGACATCTTaGGCGTCCACCTCTGACTCTCGAGCCATCAAGTTCTTTGCCTCG +
Preference number: 5 (lower is better)
Translates to: ALHLSSLLFTLGGTS*ASTSDSRAIKFFAS
Trigger: CGAGGCAAAGAACTTGATGGCTCGAGAGTCAGAGGTGGACGCCCAAGATGTCCCACCAAGTGTGAAAAGCAGAGAGCTCAGATGCAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 90 bp CACTGCACTGAGGGATGTAGACATTGGAGATGGAGGGCACCATGCTaGAGTTCGAGAGCAGAACCCCTACTACCCCAAGGAAAGCTTGTT +
Preference number: 5 (lower is better)
Translates to: HCTEGCRHWRWRAPC*SSRAEPLLPQGKLV
Trigger: AACAAGCTTTCCTTGGGGTAGTAGGGGTTCTGCTCTCGAACTCCAGCATGGTGCCCTCCATCTCCAATGTCTACATCCCTCAGTGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 90 bp CGGGATGGGAATTGGGGAGGAAGGTCAAGCTCCTCACTGGTCAGCTaGATTCCCTTGGCCACTAAGAAACTCTCTCCCAGTGGAAATGAA +
Preference number: 5 (lower is better)
Translates to: RDGNWGGRSSSSLVS*IPLATKKLSPSGNE
Trigger: TTCATTTCCACTGGGAGAGAGTTTCTTAGTGGCCAAGGGAATCCAGCTGACCAGTGAGGAGCTTGACCTTCCTCCCCAATTCCCATCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 90 bp CAATCATATTGCATTGTGGCATGTAGGGCCCTGACCACAGAAGACTaGCTGCTCCATCGGACTTTCCCAGGGAAGCACGGAGACTCTGAT +
Preference number: 5 (lower is better)
Translates to: QSYCIVACRALTTED*LLHRTFPGKHGDSD
Trigger: ATCAGAGTCTCCGTGCTTCCCTGGGAAAGTCCGATGGAGCAGCCAGTCTTCTGTGGTCAGGGCCCTACATGCCACAATGCAATATGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 90 bp TGGAGGCAGACTGGTATGAACAGATCTCCCGGGCCTGGATTTCTTTaGGGTCCAGCCTGTTTCCATGCAGAAATCAACCCACTTGCTCTG +
Preference number: 5 (lower is better)
Translates to: WRQTGMNRSPGPGFL*GPACFHAEINPLAL
Trigger: CAGAGCAAGTGGGTTGATTTCTGCATGGAAACAGGCTGGACCCCAAAGAAATCCAGGCCCGGGAGATCTGTTCATACCAGTCTGCCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS TCA 90 bp TGGATGGCCAGGAATCGTCTCTGCAATATCCGGTACATGGTGCTTTaGGTGAAGGTCGAGGCCTGGTCCAAGCCAGCAAAAATGGTGTCA +
Preference number: 5 (lower is better)
Translates to: WMARNRLCNIRYMVL*VKVEAWSKPAKMVS
Trigger: TGACACCATTTTTGCTGGCTTGGACCAGGCCTCGACCTTCACTCAAAGCACCATGTACCGGATATTGCAGAGACGATTCCTGGCCATCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS GCA 90 bp CTGCAGTCAGACACCCCACCTGTATTGAGGAGTTGTCACAGACAGTaGTGGAAACCAGGGTCCCAAATGTCTTTACCTGGATCTGGCAGA +
Preference number: 5 (lower is better)
Translates to: LQSDTPPVLRSCHRQ*WKPGSQMSLPGSGR
Trigger: TCTGCCAGATCCAGGTAAAGACATTTGGGACCCTGGTTTCCAGCACTGTCTGTGACAACTCCTCAATACAGGTGGGGTGTCTGACTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS GCA 90 bp ACTATTTCTCACTTTCACCTGGCACCTGAGGCTCCCGAAACTGGTTaGCTTCAGGCTGCCCATAGCATCTTGTTCCTGGTCAGAAGTCAC +
Preference number: 5 (lower is better)
Translates to: TISHFHLAPEAPETG*LQAAHSILFLVRSH
Trigger: GTGACTTCTGACCAGGAACAAGATGCTATGGGCAGCCTGAAGGCAACCAGTTTCGGGAGCCTCAGGTGCCAGGTGAAAGTGAGAAATAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS GCA 90 bp CAGAGCCACAGTCCAAAATGCGCCAGGTTGCTCCACTCTCCTCATTaGATGTTTGAATCCCCATGCTGTTCAGAGTCAGACAGGTCACCT +
Preference number: 5 (lower is better)
Translates to: QSHSPKCARLLHSPH*MFESPCCSESDRSP
Trigger: AGGTGACCTGTCTGACTCTGAACAGCATGGGGATTCAAACATGCAATGAGGAGAGTGGAGCAACCTGGCGCATTTTGGACTGTGGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS GCA 90 bp TGCTTGATGGATGGATCTACAATCACTGAAGACAGGGCCAGGGTCTaGCAAGAGTCCGAAGTAACCTTCTCCTCAGTGAGGGATTGCAGG +
Preference number: 5 (lower is better)
Translates to: CLMDGSTITEDRARV*QESEVTFSSVRDCR
Trigger: CCTGCAATCCCTCACTGAGGAGAAGGTTACTTCGGACTCTTGGCAGACCCTGGCCCTGTCTTCAGTGATTGTAGATCCATCCATCAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS CCA 90 bp AACCTGCCACTTTGGATCAGATCTGCAAAGCGCCCAAGGAGATCCTaGCCCGTTACCGCCCTTTCAATGCTGTACAAATCTGGAAGTGAG +
Preference number: 5 (lower is better)
Translates to: NLPLWIRSAKRPRRS*PVTALSMLYKSGSE
Trigger: CTCACTTCCAGATTTGTACAGCATTGAAAGGGCGGTAACGGGCCAGGATCTCCTTGGGCGCTTTGCAGATCTGATCCAAAGTGGCAGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS TCA 90 bp ATGAAGTTGCCAACTGCAGCCAGGATGGAGCCATCAATGGTCAGCTaGCCACCACTGCCTTCCATCTCCATGGTATTGTGGAAAAACACC +
Preference number: 5 (lower is better)
Translates to: MKLPTAARMEPSMVS*PPLPSISMVLWKNT
Trigger: GGTGTTTTTCCACAATACCATGGAGATGGAAGGCAGTGGTGGTCAGCTGACCATTGATGGCTCCATCCTGGCTGCAGTTGGCAACTTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS GCA 90 bp GTCTGGAAACTTCCATCTTCAGAGCACTGGGGAACATATTCAGCCTaGTTCAGAAAGGCCTTCTCTCTTTGTAGCTCACAGGGGCGGAGT +
Preference number: 5 (lower is better)
Translates to: VWKLPSSEHWGTYSA*FRKAFSLCSSQGRS
Trigger: ACTCCGCCCCTGTGAGCTACAAAGAGAGAAGGCCTTTCTGAAGCAGGCTGAATATGTTCCCCAGTGCTCTGAAGATGGAAGTTTCCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS GCA 90 bp GAGAAGTTACTGGTGGCTGCAGTGCTGATGTGGGCAACATCAAAGTaGTTGATGGATGGATCTACAATCACTGAAGACAGGGCCAGGGTC +
Preference number: 5 (lower is better)
Translates to: EKLLVAAVLMWATSK*LMDGSTITEDRARV
Trigger: GACCCTGGCCCTGTCTTCAGTGATTGTAGATCCATCCATCAAGCACTTTGATGTTGCCCACATCAGCACTGCAGCCACCAGTAACTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS GCA 90 bp CAACTGCAGCCAGGATGGAGCCATCAATGGTCAGCTGACCACCACTaGCTTCCATCTCCATGGTATTGTGGAAAAACACCAGAACTGATG +
Preference number: 5 (lower is better)
Translates to: QLQPGWSHQWSADHH*LPSPWYCGKTPELM
Trigger: CATCAGTTCTGGTGTTTTTCCACAATACCATGGAGATGGAAGGCAGTGGTGGTCAGCTGACCATTGATGGCTCCATCCTGGCTGCAGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS GCA 90 bp CCTCACCACCGAGTGAATTCTGCAGTGCCTGGTAAAAGGCTGTTTTaGTGTTGGTTCGGCCTTGGCTCTCTTCAAATTGCTTCACAGCCT +
Preference number: 5 (lower is better)
Translates to: PHHRVNSAVPGKRLF*CWFGLGSLQIASQP
Trigger: AGGCTGTGAAGCAATTTGAAGAGAGCCAAGGCCGAACCAACAGCAAAACAGCCTTTTACCAGGCACTGCAGAATTCACTCGGTGGTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000065916.14
ENSMUST00000166403.2
ENSMUST00000171045.9
CDS CCA 90 bp CACCGAGTGAATTCTGCAGTGCCTGGTAAAAGGCTGTTTTGCTGTTaGTTCGGCCTTGGCTCTCTTCAAATTGCTTCACAGCCTTTGCCC +
Preference number: 5 (lower is better)
Translates to: HRVNSAVPGKRLFCC*FGLGSLQIASQPLP
Trigger: GGGCAAAGGCTGTGAAGCAATTTGAAGAGAGCCAAGGCCGAACCAACAGCAAAACAGCCTTTTACCAGGCACTGCAGAATTCACTCGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000065916.14
ENSMUST00000166403.2
ENSMUST00000171045.9
CDS CCA 90 bp TTGGTTAACTGTGCATCCTTGGCTCCATCTGCATCCTTCAGAGTCTaGATGTACTTGGACCAGAAGGAGCAGTCAGCTTGTTTGAGGCCC +
Preference number: 5 (lower is better)
Translates to: LVNCASLAPSASFRV*MYLDQKEQSACLRP
Trigger: GGGCCTCAAACAAGCTGACTGCTCCTTCTGGTCCAAGTACATCCAGACTCTGAAGGATGCAGATGGAGCCAAGGATGCACAGTTAACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065916.14
ENSMUST00000166403.2
ENSMUST00000171045.9
CDS TCA 90 bp TGGCCAGGAATCGTCTCTGCAATATCCGGTACATGGTGCTTTGAGTaGAGGTCGAGGCCTGGTCCAAGCCAGCAAAAATGGTGTCATAAA +
Preference number: 5 (lower is better)
Translates to: WPGIVSAISGTWCFE*RSRPGPSQQKWCHK
Trigger: TTTATGACACCATTTTTGCTGGCTTGGACCAGGCCTCGACCTTCACTCAAAGCACCATGTACCGGATATTGCAGAGACGATTCCTGGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS TCA 90 bp AGAAAATACAAGGTGGTGTCCGCTGAGAATGTCTTGGAGTCCAGATaGAGCTGGAACCTGCCACTTTGGATCAGATCTGCAAAGCGCCCA +
Preference number: 5 (lower is better)
Translates to: RKYKVVSAENVLESR*SWNLPLWIRSAKRP
Trigger: TGGGCGCTTTGCAGATCTGATCCAAAGTGGCAGGTTCCAGCTTCATCTGGACTCCAAGACATTCTCAGCGGACACCACCTTGTATTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS TCA 90 bp GATGTGGGCAACATCAAAGTGCTTGATGGATGGATCTACAATCACTaGAGACAGGGCCAGGGTCTGCCAAGAGTCCGAAGTAACCTTCTC +
Preference number: 5 (lower is better)
Translates to: DVGNIKVLDGWIYNH*RQGQGLPRVRSNLL
Trigger: GAGAAGGTTACTTCGGACTCTTGGCAGACCCTGGCCCTGTCTTCAGTGATTGTAGATCCATCCATCAAGCACTTTGATGTTGCCCACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS CCA 90 bp CTACTACCCCAAGGAAAGCTTGTTCAGCCTGTAATTGGCAGACACTaGGACACTGCTTGGCTTCTCCAACTGTACTTTGAGTCCCAGGAA +
Preference number: 5 (lower is better)
Translates to: LLPQGKLVQPVIGRH*DTAWLLQLYFESQE
Trigger: TTCCTGGGACTCAAAGTACAGTTGGAGAAGCCAAGCAGTGTCCCAGTGTCTGCCAATTACAGGCTGAACAAGCTTTCCTTGGGGTAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 90 bp CTTCACTCTATCATTCAGCACAACTTTCCTCCGGAAGAGGGCCGTTaGTTGGTGGGGCAGAATCTGACTGCAGTTCTTGGCATTAGATTC +
Preference number: 5 (lower is better)
Translates to: LHSIIQHNFPPEEGR*LVGQNLTAVLGIRF
Trigger: GAATCTAATGCCAAGAACTGCAGTCAGATTCTGCCCCACCAACCAACGGCCCTCTTCCGGAGGAAAGTTGTGCTGAATGATAGAGTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS CCA 90 bp TGGAGCCATCAATGGTCAGCTGACCACCACTGCCTTCCATCTCCATaGTATTGTGGAAAAACACCAGAACTGATGCATTGGAGACCAGGT +
Preference number: 5 (lower is better)
Translates to: WSHQWSADHHCLPSP*YCGKTPELMHWRPG
Trigger: ACCTGGTCTCCAATGCATCAGTTCTGGTGTTTTTCCACAATACCATGGAGATGGAAGGCAGTGGTGGTCAGCTGACCATTGATGGCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS TCA 90 bp AGTAACAGTACCCAGACACTTCAGGGAACCTGCCCCGGAAGGAACTaGAGGTCACAAATGCATCTGGAAACCTGTTGTAGTTGTGGATCA +
Preference number: 5 (lower is better)
Translates to: SNSTQTLQGTCPGRN*RSQMHLETCCSCGS
Trigger: TGATCCACAACTACAACAGGTTTCCAGATGCATTTGTGACCTTCAGTTCCTTCCGGGGCAGGTTCCCTGAAGTGTCTGGGTACTGTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS TCA 90 bp TCCAGCATAGCACTGTATATCCTCATAGCTTCCTCCAGCAGTGCATaGTGGGACAAAGAACTTCCCAGGCATCTGTTTACAGGCTTGAGC +
Preference number: 5 (lower is better)
Translates to: SSIALYILIASSSSA*WDKELPRHLFTGLS
Trigger: GCTCAAGCCTGTAAACAGATGCCTGGGAAGTTCTTTGTCCCATCATGCACTGCTGGAGGAAGCTATGAGGATATACAGTGCTATGCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS TCA 90 bp GGTGACAAAGCTGTCACCATTGAGAAAATACAAGGTGGTGTCCGCTaGGAATGTCTTGGAGTCCAGATGAAGCTGGAACCTGCCACTTTG +
Preference number: 5 (lower is better)
Translates to: GDKAVTIEKIQGGVR*ECLGVQMKLEPATL
Trigger: CAAAGTGGCAGGTTCCAGCTTCATCTGGACTCCAAGACATTCTCAGCGGACACCACCTTGTATTTTCTCAATGGTGACAGCTTTGTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 90 bp ACTTCACACTTAGTGGGGCACCGAAATCTGCCAGAGATGACTAATTaGATGGCCAGGAATCGTCTCTGCAATATCCGGTACATGGTGCTT +
Preference number: 5 (lower is better)
Translates to: TSHLVGHRNLPEMTN*MARNRLCNIRYMVL
Trigger: AAGCACCATGTACCGGATATTGCAGAGACGATTCCTGGCCATCCAATTAGTCATCTCTGGCAGATTTCGGTGCCCCACTAAGTGTGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS TCA 90 bp CTGCCAGGTACTTCTCTGCCATCAGAATCCACACACCAGCAAGATTaGCCATCATTTTGGCATTGGACTGTCTGGAAACTTCCATCTTCA +
Preference number: 5 (lower is better)
Translates to: LPGTSLPSESTHQQD*PSFWHWTVWKLPSS
Trigger: TGAAGATGGAAGTTTCCAGACAGTCCAATGCCAAAATGATGGTCAATCTTGCTGGTGTGTGGATTCTGATGGCAGAGAAGTACCTGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS TCA 90 bp CTGTCTCTATTCAGGAAGCCTGGGAGACCAAACTGCTGGAAAAACTaGCTGAAGTTAAATGTGCTTCTTGTACCAAGGGCTCCTGACAAG +
Preference number: 5 (lower is better)
Translates to: LSLFRKPGRPNCWKN*LKLNVLLVPRAPDK
Trigger: CTTGTCAGGAGCCCTTGGTACAAGAAGCACATTTAACTTCAGTCAGTTTTTCCAGCAGTTTGGTCTCCCAGGCTTCCTGAATAGAGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS TCA 90 bp GTGCATGATGGGACAAAGAACTTCCCAGGCATCTGTTTACAGGCTTaGGCACTGAACACCATTTCCATCACATCTCCTAAATCTCTCGCT +
Preference number: 5 (lower is better)
Translates to: VHDGTKNFPGICLQA*ALNTISITSPKSLA
Trigger: AGCGAGAGATTTAGGAGATGTGATGGAAATGGTGTTCAGTGCTCAAGCCTGTAAACAGATGCCTGGGAAGTTCTTTGTCCCATCATGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS GCA 90 bp TCTCCTAAATCTCTCGCTATATCTTCCGGCACAGAAACAGCACGCTaGAAGAAGACAAGGAATTCTGGAAGTTCCAGGAGAGAAACGAGA +
Preference number: 5 (lower is better)
Translates to: SPKSLAISSGTETAR*KKTRNSGSSRRETR
Trigger: TCTCGTTTCTCTCCTGGAACTTCCAGAATTCCTTGTCTTCTTGCAGCGTGCTGTTTCTGTGCCGGAAGATATAGCGAGAGATTTAGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 90 bp AAGTTAAATGTGCTTCTTGTACCAAGGGCTCCTGACAAGTTAAACTaGGCAGCATTCGCCAAAAATGTCCCTCCAAACAGGTTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: KLNVLLVPRAPDKLN*AAFAKNVPPNRFCW
Trigger: CCAGCAGAACCTGTTTGGAGGGACATTTTTGGCGAATGCTGCCCAGTTTAACTTGTCAGGAGCCCTTGGTACAAGAAGCACATTTAACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 90 bp CTTCTTCTAATCCAGGTCCAACTTCCAAGTCTTCCTCTTCACTCTTaGTTAACTGTGCATCCTTGGCTCCATCTGCATCCTTCAGAGTCT +
Preference number: 5 (lower is better)
Translates to: LLLIQVQLPSLPLHS*LTVHPWLHLHPSES
Trigger: AGACTCTGAAGGATGCAGATGGAGCCAAGGATGCACAGTTAACCAAGAGTGAAGAGGAAGACTTGGAAGTTGGACCTGGATTAGAAGAAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065916.14
ENSMUST00000166403.2
ENSMUST00000171045.9
CDS TCA 90 bp AGTCCCAGGAATAACCTGGCCTTCAGTATCCACACAGTAACATTCTaGGTTGAAGCACTGGACAGGCAGAAAATATCCCTCTCTAGTACA +
Preference number: 5 (lower is better)
Translates to: SPRNNLAFSIHTVTF*VEALDRQKISLSST
Trigger: TGTACTAGAGAGGGATATTTTCTGCCTGTCCAGTGCTTCAACTCAGAATGTTACTGTGTGGATACTGAAGGCCAGGTTATTCCTGGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS TCA 90 bp ACCACTGCCTTCCATCTCCATGGTATTGTGGAAAAACACCAGAACTaGTGCATTGGAGACCAGGTTCTCAGGGACAAACACATTGAGATA +
Preference number: 5 (lower is better)
Translates to: TTAFHLHGIVEKHQN*CIGDQVLRDKHIEI
Trigger: TATCTCAATGTGTTTGTCCCTGAGAACCTGGTCTCCAATGCATCAGTTCTGGTGTTTTTCCACAATACCATGGAGATGGAAGGCAGTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS GCA 90 bp GAGCACATTTTGAAAACCCGTTGGTTCGAAGCTCTTCTGACCAGCTaGAGTAGATTCATAGCCTTTCTTCACATACACAGCCAGAGAATC +
Preference number: 5 (lower is better)
Translates to: EHILKTRWFEALLTS*SRFIAFLHIHSQRI
Trigger: GATTCTCTGGCTGTGTATGTGAAGAAAGGCTATGAATCTACTGCAGCTGGTCAGAAGAGCTTCGAACCAACGGGTTTTCAAAATGTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS CCA 90 bp AATACAAAGATGAACTTTTTGTTATGTCTGCAAGTTGACAGAAAATaGGCTCCTGGGCACACCGAGAAAGGCACCACAGGTTTGCCTGCT +
Preference number: 5 (lower is better)
Translates to: NTKMNFLLCLQVDRK*APGHTEKGTTGLPA
Trigger: AGCAGGCAAACCTGTGGTGCCTTTCTCGGTGTGCCCAGGAGCCCATTTTCTGTCAACTTGCAGACATAACAAAAAGTTCATCTTTGTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS TCA 90 bp ACCTTCGATTCTGGAGCTTTGTCAAATTTCCGTATCATCAGACACTaGGATTCTGAGAGTCCAGCCTCTGTCTGTAACCACTGTAGTTTC +
Preference number: 5 (lower is better)
Translates to: TFDSGALSNFRIIRH*DSESPASVCNHCSF
Trigger: GAAACTACAGTGGTTACAGACAGAGGCTGGACTCTCAGAATCTCAGTGTCTGATGATACGGAAATTTGACAAAGCTCCAGAATCGAAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS TCA 90 bp GAAAAACTGACTGAAGTTAAATGTGCTTCTTGTACCAAGGGCTCCTaGCAAGTTAAACTGGGCAGCATTCGCCAAAAATGTCCCTCCAAA +
Preference number: 5 (lower is better)
Translates to: EKLTEVKCASCTKGS*QVKLGSIRQKCPSK
Trigger: TTTGGAGGGACATTTTTGGCGAATGCTGCCCAGTTTAACTTGTCAGGAGCCCTTGGTACAAGAAGCACATTTAACTTCAGTCAGTTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS TCA 90 bp ATGGGACAAAGAACTTCCCAGGCATCTGTTTACAGGCTTGAGCACTaGACACCATTTCCATCACATCTCCTAAATCTCTCGCTATATCTT +
Preference number: 5 (lower is better)
Translates to: MGQRTSQASVYRLEH*TPFPSHLLNLSLYL
Trigger: AAGATATAGCGAGAGATTTAGGAGATGTGATGGAAATGGTGTTCAGTGCTCAAGCCTGTAAACAGATGCCTGGGAAGTTCTTTGTCCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS TCA 90 bp AGATTCTTTGCTGGCCAGCATCATAGAGACTTTGAAGAAAGAGGCTaGAGTTTCTGGAAGCTACTTCTCTGTAGCTCACGATCTTCATTA +
Preference number: 5 (lower is better)
Translates to: RFFAGQHHRDFEERG*SFWKLLLCSSRSSL
Trigger: TAATGAAGATCGTGAGCTACAGAGAAGTAGCTTCCAGAAACTTCAGCCTCTTTCTTCAAAGTCTCTATGATGCTGGCCAGCAAAGAATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 90 bp AATTCTGGAAGTTCCAGGAGAGAAACGAGAAATTTTAAGGCATCTTaGTTCTCTTGTAGGTTGACTTTGAAGCCAAAGTTACCCACAACT +
Preference number: 5 (lower is better)
Translates to: NSGSSRRETRNFKAS*FSCRLTLKPKLPTT
Trigger: AGTTGTGGGTAACTTTGGCTTCAAAGTCAACCTACAAGAGAACCAAGATGCCTTAAAATTTCTCGTTTCTCTCCTGGAACTTCCAGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS GCA 72 bp GCAGTGGACACTGTGGGCTTTCACAGGCAGGCTGGGTaGCTACCACACGGGTCCCTGGCACTTCCTCTCCAC +
Preference number: 6 (lower is better)
Translates to: AVDTVGFHRQAG*LPHGSLALPLH
Trigger: GTGGAGAGGAAGTGCCAGGGACCCGTGTGGTAGGCACCCAGCCTGCCTGTGAAAGCCCACAGTGTCCACTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS TCA 72 bp GTGCTGACTCTCCAGGCTACAAATCAGTGGCCCTGGTaGAAACGCACTCCGGAGGCCCTGGCGGCACAGCAG +
Preference number: 6 (lower is better)
Translates to: VLTLQATNQWPW*KRTPEALAAQQ
Trigger: CTGCTGTGCCGCCAGGGCCTCCGGAGTGCGTTTTCACCAGGGCCACTGATTTGTAGCCTGGAGAGTCAGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS GCA 72 bp GGATGCAGGCTGAGCTGCCTGCCTGTTCTTGGTAGGTaGCAGCAGGACAGGGAGTGCATCGCCCATCCTGAG +
Preference number: 6 (lower is better)
Translates to: GCRLSCLPVLGR*QQDRECIAHPE
Trigger: CTCAGGATGGGCGATGCACTCCCTGTCCTGCTGGCACCTACCAAGAACAGGCAGGCAGCTCAGCCTGCATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 72 bp ATGGAGGAGACGCCGGTTTCTTATCTCACAGCTCCTTaGACACCGAGTTGGCCTGCCCTGCTGGCGGGTGCC +
Preference number: 6 (lower is better)
Translates to: MEETPVSYLTAP*TPSWPALLAGA
Trigger: GGCACCCGCCAGCAGGGCAGGCCAACTCGGTGTCCAAGGAGCTGTGAGATAAGAAACCGGCGTCTCCTCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 72 bp CTGCCACAGCTGAGGCCTTTGACAGGCTCGGGGTGGTaGCAGTGTCACCCAGTGCTGACTCTCCAGGCTACA +
Preference number: 6 (lower is better)
Translates to: LPQLRPLTGSGW*QCHPVLTLQAT
Trigger: TGTAGCCTGGAGAGTCAGCACTGGGTGACACTGCCACCACCCCGAGCCTGTCAAAGGCCTCAGCTGTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CAA 72 bp CATGGAGGAGACGCCGGTTTCTTATCTCACAGCTCCTaGGACACCGAGTTGGCCTGCCCTGCTGGCGGGTGC +
Preference number: 6 (lower is better)
Translates to: HGGDAGFLSHSS*DTELACPAGGC
Trigger: GCACCCGCCAGCAGGGCAGGCCAACTCGGTGTCCAAGGAGCTGTGAGATAAGAAACCGGCGTCTCCTCCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS GCA 72 bp TCCTTGGACACCGAGTTGGCCTGCCCTGCTGGCGGGTaGCATACACTTCCATCCCCTCTGTGTCTACACACC +
Preference number: 6 (lower is better)
Translates to: SLDTELACPAGG*HTLPSPLCLHT
Trigger: GGTGTGTAGACACAGAGGGGATGGAAGTGTATGGCACCCGCCAGCAGGGCAGGCCAACTCGGTGTCCAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS GCA 72 bp ATCTCACAGCTCCTTGGACACCGAGTTGGCCTGCCCTaGTGGCGGGTGCCATACACTTCCATCCCCTCTGTG +
Preference number: 6 (lower is better)
Translates to: ISQLLGHRVGLP*WRVPYTSIPSV
Trigger: CACAGAGGGGATGGAAGTGTATGGCACCCGCCAGCAGGGCAGGCCAACTCGGTGTCCAAGGAGCTGTGAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 72 bp AATGGCAGTGGACACTGTGGGCTTTCACAGGCAGGCTaGGTGCCTACCACACGGGTCCCTGGCACTTCCTCT +
Preference number: 6 (lower is better)
Translates to: NGSGHCGLSQAG*VPTTRVPGTSS
Trigger: AGAGGAAGTGCCAGGGACCCGTGTGGTAGGCACCCAGCCTGCCTGTGAAAGCCCACAGTGTCCACTGCCATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 72 bp GTTCCTTCCAAGAGTGCCAGACCCTGCAGGAACTCTTaGCCTCCCAGACTCAAGGTCATCTGGCGGCTCCCC +
Preference number: 6 (lower is better)
Translates to: VPSKSARPCRNS*PPRLKVIWRLP
Trigger: GGGGAGCCGCCAGATGACCTTGAGTCTGGGAGGCCAAGAGTTCCTGCAGGGTCTGGCACTCTTGGAAGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS CCA 72 bp CTTTGCCAAGGCTGCAGCTTGCTGTTGGGCCCTCTCTaGGCTGATAATTGCAGCCGGGGACAGTGCAGAGCC +
Preference number: 6 (lower is better)
Translates to: LCQGCSLLLGPL*ADNCSRGQCRA
Trigger: GGCTCTGCACTGTCCCCGGCTGCAATTATCAGCCCAGAGAGGGCCCAACAGCAAGCTGCAGCCTTGGCAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065916.14
ENSMUST00000166403.2
ENSMUST00000171045.9
CDS GCA 72 bp CTGCCTGTTCTTGGTAGGTGCCAGCAGGACAGGGAGTaGATCGCCCATCCTGAGAGAAGCTTCCTTCAGGGC +
Preference number: 6 (lower is better)
Translates to: LPVLGRCQQDRE*IAHPERSFLQG
Trigger: GCCCTGAAGGAAGCTTCTCTCAGGATGGGCGATGCACTCCCTGTCCTGCTGGCACCTACCAAGAACAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS GCA 72 bp TTGATTTGTGGAGGTGTGGGGGTACGGGTACCTGGCTaGCAGCAGCTGGCCCTTGGCTTGGTAGCATCCCAT +
Preference number: 6 (lower is better)
Translates to: LICGGVGVRVPG*QQLALGLVASH
Trigger: ATGGGATGCTACCAAGCCAAGGGCCAGCTGCTGGCAGCCAGGTACCCGTACCCCCACACCTCCACAAATCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS GCA 72 bp TGCAGCTTGCTGTTGGGCCCTCTCTGGGCTGATAATTaGAGCCGGGGACAGTGCAGAGCCTCCCATAAGCAG +
Preference number: 6 (lower is better)
Translates to: CSLLLGPLWADN*SRGQCRASHKQ
Trigger: CTGCTTATGGGAGGCTCTGCACTGTCCCCGGCTGCAATTATCAGCCCAGAGAGGGCCCAACAGCAAGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS CCA 72 bp GGGGCCCATCACACTGCACATGCCTCCACTGGCCACTaGCACTGCACTGAGGGATGTAGACATTGGAGATGG +
Preference number: 6 (lower is better)
Translates to: GAHHTAHASTGH*HCTEGCRHWRW
Trigger: CCATCTCCAATGTCTACATCCCTCAGTGCAGTGCCAGTGGCCAGTGGAGGCATGTGCAGTGTGATGGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 72 bp CACTGGGGAGAAGGCTCCATCCAGTGCCTCACAGACTaGAGAGTAGCCAAGACCCACTTTCCTGGACAGGGC +
Preference number: 6 (lower is better)
Translates to: HWGEGSIQCLTD*RVAKTHFPGQG
Trigger: GCCCTGTCCAGGAAAGTGGGTCTTGGCTACTCTCCAGTCTGTGAGGCACTGGATGGAGCCTTCTCCCCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 72 bp TGGCCTCCCAGACTCAAGGTCATCTGGCGGCTCCCCTaGTCATATGTCACCCCAGCACATGTAGCATTGGCC +
Preference number: 6 (lower is better)
Translates to: WPPRLKVIWRLP*SYVTPAHVALA
Trigger: GGCCAATGCTACATGTGCTGGGGTGACATATGACCAGGGGAGCCGCCAGATGACCTTGAGTCTGGGAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS CCA 72 bp GACCTCTGGTGCCCGGAAGCGGTTGTCTGCCAAGGGTaGGGCAGCATATGGAACTCCAAGGAACCGGTATAC +
Preference number: 6 (lower is better)
Translates to: DLWCPEAVVCQG*GSIWNSKEPVY
Trigger: GTATACCGGTTCCTTGGAGTTCCATATGCTGCCCCACCCTTGGCAGACAACCGCTTCCGGGCACCAGAGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS CAA 72 bp GCCGGTTTCTTATCTCACAGCTCCTTGGACACCGAGTaGGCCTGCCCTGCTGGCGGGTGCCATACACTTCCA +
Preference number: 6 (lower is better)
Translates to: AGFLSHSSLDTE*ACPAGGCHTLP
Trigger: TGGAAGTGTATGGCACCCGCCAGCAGGGCAGGCCAACTCGGTGTCCAAGGAGCTGTGAGATAAGAAACCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CAA 72 bp TGCTTGAGTTTGCATGGTCTGCCACAGCTGAGGCCTTaGACAGGCTCGGGGTGGTGGCAGTGTCACCCAGTG +
Preference number: 6 (lower is better)
Translates to: CLSLHGLPQLRP*TGSGWWQCHPV
Trigger: CACTGGGTGACACTGCCACCACCCCGAGCCTGTCAAAGGCCTCAGCTGTGGCAGACCATGCAAACTCAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CAA 90 bp CTCCTACTCCATGGAGGAGACGCCGGTTTCTTATCTCACAGCTCCTaGGACACCGAGTTGGCCTGCCCTGCTGGCGGGTGCCATACACTT +
Preference number: 6 (lower is better)
Translates to: LLLHGGDAGFLSHSS*DTELACPAGGCHTL
Trigger: AAGTGTATGGCACCCGCCAGCAGGGCAGGCCAACTCGGTGTCCAAGGAGCTGTGAGATAAGAAACCGGCGTCTCCTCCATGGAGTAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CAA 90 bp GCAGGATCCGTTGCTTGTGTAGCTGGCAGAAGGACAGACAAACTGTaGGCCTCCCCAGCTGCCTGCTGCCAGGTACTTCTCTGCCATCAG +
Preference number: 6 (lower is better)
Translates to: AGSVACVAGRRTDKL*ASPAACCQVLLCHQ
Trigger: CTGATGGCAGAGAAGTACCTGGCAGCAGGCAGCTGGGGAGGCCAACAGTTTGTCTGTCCTTCTGCCAGCTACACAAGCAACGGATCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS TCA 72 bp GGGCCAGGACATGCTGGGATCTCGCCTGGCTTAGTCTaGGTACCATCCAGTTTCTGGCCAGCCTCATCCACA +
Preference number: 6 (lower is better)
Translates to: GPGHAGISPGLV*VPSSFWPASST
Trigger: TGTGGATGAGGCTGGCCAGAAACTGGATGGTACTCAGACTAAGCCAGGCGAGATCCCAGCATGTCCTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS TCA 72 bp AGCCAAGACCCACTTTCCTGGACAGGGCTCTGCTCTTaGGGACATCACAGAGGCCAGGACACTGAGCACTGC +
Preference number: 6 (lower is better)
Translates to: SQDPLSWTGLCS*GHHRGQDTEHC
Trigger: GCAGTGCTCAGTGTCCTGGCCTCTGTGATGTCCTCAAGAGCAGAGCCCTGTCCAGGAAAGTGGGTCTTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS TCA 72 bp CTGCCAGCAGCTGGCCCTTGGCTTGGTAGCATCCCATaGACCTGTCCAATTCAAGACCTCTGGTGCCCGGAA +
Preference number: 6 (lower is better)
Translates to: LPAAGPWLGSIP*TCPIQDLWCPE
Trigger: TTCCGGGCACCAGAGGTCTTGAATTGGACAGGTTCATGGGATGCTACCAAGCCAAGGGCCAGCTGCTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS GCA 72 bp TTCTTATCTCACAGCTCCTTGGACACCGAGTTGGCCTaGCCTGCTGGCGGGTGCCATACACTTCCATCCCCT +
Preference number: 6 (lower is better)
Translates to: FLSHSSLDTELA*PAGGCHTLPSP
Trigger: AGGGGATGGAAGTGTATGGCACCCGCCAGCAGGGCAGGCCAACTCGGTGTCCAAGGAGCTGTGAGATAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS GCA 72 bp CTGCAGGCCTCATCATTTGCACAATCTGTCAAGCACTaGACCAGCGGGGAGTCAGCACTGGGGACACTGGAC +
Preference number: 6 (lower is better)
Translates to: LQASSFAQSVKH*TSGESALGTLD
Trigger: GTCCAGTGTCCCCAGTGCTGACTCCCCGCTGGTGCAGTGCTTGACAGATTGTGCAAATGATGAGGCCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 72 bp CCGGTTTCTTATCTCACAGCTCCTTGGACACCGAGTTaGCCTGCCCTGCTGGCGGGTGCCATACACTTCCAT +
Preference number: 6 (lower is better)
Translates to: PVSYLTAPWTPS*PALLAGAIHFH
Trigger: ATGGAAGTGTATGGCACCCGCCAGCAGGGCAGGCCAACTCGGTGTCCAAGGAGCTGTGAGATAAGAAACCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 72 bp TGCATTGTGGCATGTAGGGCCCTGACCACAGAAGACTaGCTGCTCCATCGGACTTTCCCAGGGAAGCACGGA +
Preference number: 6 (lower is better)
Translates to: CIVACRALTTED*LLHRTFPGKHG
Trigger: TCCGTGCTTCCCTGGGAAAGTCCGATGGAGCAGCCAGTCTTCTGTGGTCAGGGCCCTACATGCCACAATGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 72 bp TTCATTGATTTGTGGAGGTGTGGGGGTACGGGTACCTaGCTGCCAGCAGCTGGCCCTTGGCTTGGTAGCATC +
Preference number: 6 (lower is better)
Translates to: FIDLWRCGGTGT*LPAAGPWLGSI
Trigger: GATGCTACCAAGCCAAGGGCCAGCTGCTGGCAGCCAGGTACCCGTACCCCCACACCTCCACAAATCAATGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS CAA 72 bp CCTGTCCAATTCAAGACCTCTGGTGCCCGGAAGCGGTaGTCTGCCAAGGGTGGGGCAGCATATGGAACTCCA +
Preference number: 6 (lower is better)
Translates to: PVQFKTSGARKR*SAKGGAAYGTP
Trigger: TGGAGTTCCATATGCTGCCCCACCCTTGGCAGACAACCGCTTCCGGGCACCAGAGGTCTTGAATTGGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS CAA 72 bp TGGATGTACTTGGACCAGAAGGAGCAGTCAGCTTGTTaGAGGCCCTGCCGATTGGGAAGCTGGGCGCTGAGC +
Preference number: 6 (lower is better)
Translates to: WMYLDQKEQSAC*RPCRLGSWALS
Trigger: GCTCAGCGCCCAGCTTCCCAATCGGCAGGGCCTCAAACAAGCTGACTGCTCCTTCTGGTCCAAGTACATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065916.14
ENSMUST00000166403.2
ENSMUST00000171045.9
CDS TCA 72 bp TCTGGCAGAAGCCACGGGCTATCAGCTCATCCAGTATaGAGACCTGGAAGGCCTGCAGCAAGCCGGAGTAGT +
Preference number: 6 (lower is better)
Translates to: SGRSHGLSAHPV*RPGRPAASRSS
Trigger: ACTACTCCGGCTTGCTGCAGGCCTTCCAGGTCTTCATACTGGATGAGCTGATAGCCCGTGGCTTCTGCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS TCA 72 bp CAGCAGCCCCCAGTTGCCAGCTACTTCATCAGAGCCTaGACTCAGGAAGCCGAAGACCCCCAGTCTGTAGTT +
Preference number: 6 (lower is better)
Translates to: QQPPVASYFIRA*TQEAEDPQSVV
Trigger: AACTACAGACTGGGGGTCTTCGGCTTCCTGAGTTCAGGCTCTGATGAAGTAGCTGGCAACTGGGGGCTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS TCA 72 bp GGCTGCCATGGCCATAGCTTTCGGGGACATGGTACATaGAGACATTTCCACGGGTTCTCCTTGCCCAGAGGC +
Preference number: 6 (lower is better)
Translates to: GCHGHSFRGHGT*RHFHGFSLPRG
Trigger: GCCTCTGGGCAAGGAGAACCCGTGGAAATGTCTTCATGTACCATGTCCCCGAAAGCTATGGCCATGGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065916.14
ENSMUST00000166403.2
ENSMUST00000171045.9
CDS TCA 72 bp CTGCATGACTTTCAGGGACAGGCTCTGCTCCTCCGTTaGAAACTGGCCCTGGTAGGCAGAGTAGAAGGGCAG +
Preference number: 6 (lower is better)
Translates to: LHDFQGQALLLR*KLALVGRVEGQ
Trigger: CTGCCCTTCTACTCTGCCTACCAGGGCCAGTTTTCAACGGAGGAGCAGAGCCTGTCCCTGAAAGTCATGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065916.14
ENSMUST00000166403.2
ENSMUST00000171045.9
CDS GCA 72 bp AGGACAGACAAACTGTTGGCCTCCCCAGCTGCCTGCTaGCAGGTACTTCTCTGCCATCAGAATCCACACACC +
Preference number: 6 (lower is better)
Translates to: RTDKLLASPAAC*QVLLCHQNPHT
Trigger: GGTGTGTGGATTCTGATGGCAGAGAAGTACCTGGCAGCAGGCAGCTGGGGAGGCCAACAGTTTGTCTGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS GCA 72 bp CATCACACTGCACATGCCTCCACTGGCCACTGGCACTaGACTGAGGGATGTAGACATTGGAGATGGAGGGCA +
Preference number: 6 (lower is better)
Translates to: HHTAHASTGHWH*TEGCRHWRWRA
Trigger: TGCCCTCCATCTCCAATGTCTACATCCCTCAGTGCAGTGCCAGTGGCCAGTGGAGGCATGTGCAGTGTGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS GCA 72 bp GGGGCAGCATATGGAACTCCAAGGAACCGGTATACTTaGTTCCAGGCAGTGCCCACCTTGATGACCTGGGAC +
Preference number: 6 (lower is better)
Translates to: GAAYGTPRNRYT*FQAVPTLMTWD
Trigger: GTCCCAGGTCATCAAGGTGGGCACTGCCTGGAAGCAAGTATACCGGTTCCTTGGAGTTCCATATGCTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS CCA 72 bp GCAGTGCACTGGGGTGGTGACCTGTCTCCTACTCCATaGAGGAGACGCCGGTTTCTTATCTCACAGCTCCTT +
Preference number: 6 (lower is better)
Translates to: AVHWGGDLSPTP*RRRRFLISQLL
Trigger: AAGGAGCTGTGAGATAAGAAACCGGCGTCTCCTCCATGGAGTAGGAGACAGGTCACCACCCCAGTGCACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 72 bp CACTGGACAGGCATAAACTCCCCATCTGCAGTGCACTaGGGTGGTGACCTGTCTCCTACTCCATGGAGGAGA +
Preference number: 6 (lower is better)
Translates to: HWTGINSPSAVH*GGDLSPTPWRR
Trigger: TCTCCTCCATGGAGTAGGAGACAGGTCACCACCCCAGTGCACTGCAGATGGGGAGTTTATGCCTGTCCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 72 bp CACTGGCACTGCACTGAGGGATGTAGACATTGGAGATaGAGGGCACCATGCTGGAGTTCGAGAGCAGAACCC +
Preference number: 6 (lower is better)
Translates to: HWHCTEGCRHWR*RAPCWSSRAEP
Trigger: GGGTTCTGCTCTCGAACTCCAGCATGGTGCCCTCCATCTCCAATGTCTACATCCCTCAGTGCAGTGCCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 72 bp ACTGGCCACTGGCACTGCACTGAGGGATGTAGACATTaGAGATGGAGGGCACCATGCTGGAGTTCGAGAGCA +
Preference number: 6 (lower is better)
Translates to: TGHWHCTEGCRH*RWRAPCWSSRA
Trigger: TGCTCTCGAACTCCAGCATGGTGCCCTCCATCTCCAATGTCTACATCCCTCAGTGCAGTGCCAGTGGCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 72 bp CCACTTGCTCTGGATAGCTCACAGTTTGTGGGACACTaGGGCATCTGTGAGGAGCGTGACATCAGCGAGCCT +
Preference number: 6 (lower is better)
Translates to: PLALDSSQFVGH*GICEERDISEP
Trigger: AGGCTCGCTGATGTCACGCTCCTCACAGATGCCCCAGTGTCCCACAAACTGTGAGCTATCCAGAGCAAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CAA 72 bp GTTGCTTGTGTAGCTGGCAGAAGGACAGACAAACTGTaGGCCTCCCCAGCTGCCTGCTGCCAGGTACTTCTC +
Preference number: 6 (lower is better)
Translates to: VACVAGRRTDKL*ASPAACCQVLL
Trigger: GAGAAGTACCTGGCAGCAGGCAGCTGGGGAGGCCAACAGTTTGTCTGTCCTTCTGCCAGCTACACAAGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CAA 90 bp CCTGAGGCTCCCGAAACTGGTTGCCTTCAGGCTGCCCATAGCATCTaGTTCCTGGTCAGAAGTCACGCAGGCAAAGTTGTCCCTTGTCCA +
Preference number: 6 (lower is better)
Translates to: PEAPETGCLQAAHSI*FLVRSHAGKVVPCP
Trigger: TGGACAAGGGACAACTTTGCCTGCGTGACTTCTGACCAGGAACAAGATGCTATGGGCAGCCTGAAGGCAACCAGTTTCGGGAGCCTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS CAA 90 bp CAGGGTCTGCCAAGAGTCCGAAGTAACCTTCTCCTCAGTGAGGGATaGCAGGGCAGCAGAAGGGCAGAAGCTAGGAGTGTCACTCCATAC +
Preference number: 6 (lower is better)
Translates to: QGLPRVRSNLLLSEG*QGSRRAEARSVTPY
Trigger: GTATGGAGTGACACTCCTAGCTTCTGCCCTTCTGCTGCCCTGCAATCCCTCACTGAGGAGAAGGTTACTTCGGACTCTTGGCAGACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS TCA 72 bp AGTGCGGCTGGGGTCAGTTCCTGGCCATCACCGTTCTaGGTCTTCCATCGTTCATACCACTCAAAGACCTGC +
Preference number: 6 (lower is better)
Translates to: SAAGVSSWPSPF*VFHRSYHSKTC
Trigger: GCAGGTCTTTGAGTGGTATGAACGATGGAAGACTCAGAACGGTGATGGCCAGGAACTGACCCCAGCCGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS TCA 72 bp GGCTGTCTCGCAGAAGATCACTCCATCAGCCACATCTaGCCCAGAGAATGGCAGTGGACACTGTGGGCTTTC +
Preference number: 6 (lower is better)
Translates to: GCLAEDHSISHI*PREWQWTLWAF
Trigger: GAAAGCCCACAGTGTCCACTGCCATTCTCTGGGTCAGATGTGGCTGATGGAGTGATCTTCTGCGAGACAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS TCA 72 bp TCCCCACTGTCCCTGTTCTTCTGGCTGGCTTGGTACTaGCCATTCTGGTCACACTGTAGGCCAGCCTCATTC +
Preference number: 6 (lower is better)
Translates to: SPLSLFFWLAWY*PFWSHCRPASF
Trigger: GAATGAGGCTGGCCTACAGTGTGACCAGAATGGTCAGTACCAAGCCAGCCAGAAGAACAGGGACAGTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS TCA 72 bp CCAACTGCAGCCAGGATGGAGCCATCAATGGTCAGCTaGCCACCACTGCCTTCCATCTCCATGGTATTGTGG +
Preference number: 6 (lower is better)
Translates to: PTAARMEPSMVS*PPLPSISMVLW
Trigger: CCACAATACCATGGAGATGGAAGGCAGTGGTGGTCAGCTGACCATTGATGGCTCCATCCTGGCTGCAGTTGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS GCA 72 bp AGAAGGACAGACAAACTGTTGGCCTCCCCAGCTGCCTaGTGCCAGGTACTTCTCTGCCATCAGAATCCACAC +
Preference number: 6 (lower is better)
Translates to: RRTDKLLASPAA*CQVLLCHQNPH
Trigger: GTGTGGATTCTGATGGCAGAGAAGTACCTGGCAGCAGGCAGCTGGGGAGGCCAACAGTTTGTCTGTCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS GCA 72 bp GCTGGATCCACACACCATGTTCCTGTCCCTGATGTCTaGTTCCTGACATACTCTCCCGTCTGGAGGCAGACT +
Preference number: 6 (lower is better)
Translates to: AGSTHHVPVPDV*FLTYSPVWRQT
Trigger: AGTCTGCCTCCAGACGGGAGAGTATGTCAGGAAGCAGACATCAGGGACAGGAACATGGTGTGTGGATCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 72 bp TGTAGCTCACAGGGGCGGAGTGGCTGTGCATCTACCTaGTACTCAAAGATGTTGGCTGCTACCAGGCAGACT +
Preference number: 6 (lower is better)
Translates to: CSSQGRSGCAST*YSKMLAATRQT
Trigger: AGTCTGCCTGGTAGCAGCCAACATCTTTGAGTACCAGGTAGATGCACAGCCACTCCGCCCCTGTGAGCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 72 bp GAGGGATGTAGACATTGGAGATGGAGGGCACCATGCTaGAGTTCGAGAGCAGAACCCCTACTACCCCAAGGA +
Preference number: 6 (lower is better)
Translates to: EGCRHWRWRAPC*SSRAEPLLPQG
Trigger: TCCTTGGGGTAGTAGGGGTTCTGCTCTCGAACTCCAGCATGGTGCCCTCCATCTCCAATGTCTACATCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 72 bp CTGGAGGCAGACTGGTATGAACAGATCTCCCGGGCCTaGATTTCTTTGGGGTCCAGCCTGTTTCCATGCAGA +
Preference number: 6 (lower is better)
Translates to: LEADWYEQISRA*ISLGSSLFPCR
Trigger: TCTGCATGGAAACAGGCTGGACCCCAAAGAAATCCAGGCCCGGGAGATCTGTTCATACCAGTCTGCCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CAA 72 bp GGGCGTCCACCTCTGACTCTCGAGCCATCAAGTTCTTaGCCTCGGGAATCTACACACCAGCATTCTCCAGCA +
Preference number: 6 (lower is better)
Translates to: GRPPLTLEPSSS*PRESTHQHSPA
Trigger: TGCTGGAGAATGCTGGTGTGTAGATTCCCGAGGCAAAGAACTTGATGGCTCGAGAGTCAGAGGTGGACGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CAA 72 bp CCAAGAGTCCGAAGTAACCTTCTCCTCAGTGAGGGATaGCAGGGCAGCAGAAGGGCAGAAGCTAGGAGTGTC +
Preference number: 6 (lower is better)
Translates to: PRVRSNLLLSEG*QGSRRAEARSV
Trigger: GACACTCCTAGCTTCTGCCCTTCTGCTGCCCTGCAATCCCTCACTGAGGAGAAGGTTACTTCGGACTCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS CAA 72 bp TGGGGCAGCATATGGAACTCCAAGGAACCGGTATACTaGCTTCCAGGCAGTGCCCACCTTGATGACCTGGGA +
Preference number: 6 (lower is better)
Translates to: WGSIWNSKEPVY*LPGSAHLDDLG
Trigger: TCCCAGGTCATCAAGGTGGGCACTGCCTGGAAGCAAGTATACCGGTTCCTTGGAGTTCCATATGCTGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS CAA 90 bp TCACAGGGGCGGAGTGGCTGTGCATCTACCTGGTACTCAAAGATGTaGGCTGCTACCAGGCAGACTGAGCTCAACAAAGTAGAGACCCAC +
Preference number: 6 (lower is better)
Translates to: SQGRSGCASTWYSKM*AATRQTELNKVETH
Trigger: GTGGGTCTCTACTTTGTTGAGCTCAGTCTGCCTGGTAGCAGCCAACATCTTTGAGTACCAGGTAGATGCACAGCCACTCCGCCCCTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS TCA 72 bp GCCTCCAATCATATTGCATTGTGGCATGTAGGGCCCTaGCCACAGAAGACTGGCTGCTCCATCGGACTTTCC +
Preference number: 6 (lower is better)
Translates to: ASNHIALWHVGP*PQKTGCSIGLS
Trigger: GGAAAGTCCGATGGAGCAGCCAGTCTTCTGTGGTCAGGGCCCTACATGCCACAATGCAATATGATTGGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS TCA 72 bp AATCCTTGCCACTATTTCTCACTTTCACCTGGCACCTaGGGCTCCCGAAACTGGTTGCCTTCAGGCTGCCCA +
Preference number: 6 (lower is better)
Translates to: NPCHYFSLSPGT*GSRNWLPSGCP
Trigger: TGGGCAGCCTGAAGGCAACCAGTTTCGGGAGCCTCAGGTGCCAGGTGAAAGTGAGAAATAGTGGCAAGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS TCA 72 bp ACACCGAGAAAGGCACCACAGGTTTGCCTGCTCTGCTaGAAACAGGTGTGTGAAGAGCCAGTACTGCTGGCT +
Preference number: 6 (lower is better)
Translates to: TPRKAPQVCLLC*KQVCEEPVLLA
Trigger: AGCCAGCAGTACTGGCTCTTCACACACCTGTTTTCAGCAGAGCAGGCAAACCTGTGGTGCCTTTCTCGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS TCA 72 bp GGCCACTCACAGCCAGGAGCTTGGTCTGAGCATCATTaGGAATGTTGGCAGGCTTCTGGCGGAGACATGATA +
Preference number: 6 (lower is better)
Translates to: GHSQPGAWSEHH*ECWQASGGDMI
Trigger: TATCATGTCTCCGCCAGAAGCCTGCCAACATTCTCAATGATGCTCAGACCAAGCTCCTGGCTGTGAGTGGCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065916.14
ENSMUST00000166403.2
ENSMUST00000171045.9
CDS GCA 72 bp ACTGAGGGATGTAGACATTGGAGATGGAGGGCACCATaGTGGAGTTCGAGAGCAGAACCCCTACTACCCCAA +
Preference number: 6 (lower is better)
Translates to: TEGCRHWRWRAP*WSSRAEPLLPQ
Trigger: TTGGGGTAGTAGGGGTTCTGCTCTCGAACTCCAGCATGGTGCCCTCCATCTCCAATGTCTACATCCCTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS GCA 72 bp GACACGAAGTTTCACTTCCTCACATGGGCCAGGACATaGTGGGATCTCGCCTGGCTTAGTCTGAGTACCATC +
Preference number: 6 (lower is better)
Translates to: DTKFHFLTWART*WDLAWLSLSTI
Trigger: GATGGTACTCAGACTAAGCCAGGCGAGATCCCAGCATGTCCTGGCCCATGTGAGGAAGTGAAACTTCGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS GCA 72 bp CATGGCACTGCACAGGTTCCCAGCCTCCAATCATATTaGATTGTGGCATGTAGGGCCCTGACCACAGAAGAC +
Preference number: 6 (lower is better)
Translates to: HGTAQVPSLQSY*IVACRALTTED
Trigger: GTCTTCTGTGGTCAGGGCCCTACATGCCACAATGCAATATGATTGGAGGCTGGGAACCTGTGCAGTGCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS GCA 72 bp CAAGTCACATTGCACTGGGGAGAAGGCTCCATCCAGTaGCTCACAGACTGGAGAGTAGCCAAGACCCACTTT +
Preference number: 6 (lower is better)
Translates to: QVTLHWGEGSIQ*LTDWRVAKTHF
Trigger: AAAGTGGGTCTTGGCTACTCTCCAGTCTGTGAGGCACTGGATGGAGCCTTCTCCCCAGTGCAATGTGACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS GCA 72 bp GCCCAAGGAGATCCTGGCCCGTTACCGCCCTTTCAATaGTGTACAAATCTGGAAGTGAGCCCACTGAGATGT +
Preference number: 6 (lower is better)
Translates to: AQGDPGPLPPFQ*CTNLEVSPLRC
Trigger: ACATCTCAGTGGGCTCACTTCCAGATTTGTACAGCATTGAAAGGGCGGTAACGGGCCAGGATCTCCTTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS GCA 72 bp ACAGATGATAAAGTAGTCCCGGGTGGCATTCTCCAGTaGCCGAGAGAAGGAGGCATAGTCGTCTGTGGAGTG +
Preference number: 6 (lower is better)
Translates to: TDDKVVPGGILQ*PREGGIVVCGV
Trigger: CACTCCACAGACGACTATGCCTCCTTCTCTCGGGCACTGGAGAATGCCACCCGGGACTACTTTATCATCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065916.14
ENSMUST00000166403.2
ENSMUST00000171045.9
CDS CCA 72 bp CTGAGCTCTCTGCTTTTCACACTTGGTGGGACATCTTaGGCGTCCACCTCTGACTCTCGAGCCATCAAGTTC +
Preference number: 6 (lower is better)
Translates to: LSSLLFTLGGTS*ASTSDSRAIKF
Trigger: GAACTTGATGGCTCGAGAGTCAGAGGTGGACGCCCAAGATGTCCCACCAAGTGTGAAAAGCAGAGAGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 72 bp GGGATGGGAATTGGGGAGGAAGGTCAAGCTCCTCACTaGTCAGCTGGATTCCCTTGGCCACTAAGAAACTCT +
Preference number: 6 (lower is better)
Translates to: GMGIGEEGQAPH*SAGFPWPLRNS
Trigger: AGAGTTTCTTAGTGGCCAAGGGAATCCAGCTGACCAGTGAGGAGCTTGACCTTCCTCCCCAATTCCCATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 72 bp AGAAACTTCTCAGAGAAAGCATCCCGGGATGGGAATTaGGGAGGAAGGTCAAGCTCCTCACTGGTCAGCTGG +
Preference number: 6 (lower is better)
Translates to: RNFSEKASRDGN*GGRSSSSLVSW
Trigger: CCAGCTGACCAGTGAGGAGCTTGACCTTCCTCCCCAATTCCCATCCCGGGATGCTTTCTCTGAGAAGTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 72 bp CAGCAAGCCGGAGTAGTCAACACTGCACATCTTTCCTaGTGGGAGCAGGAGCTGGAAGTGTGCTTGAGTTTG +
Preference number: 6 (lower is better)
Translates to: QQAGVVNTAHLS*WEQELEVCLSL
Trigger: CAAACTCAAGCACACTTCCAGCTCCTGCTCCCACCAGGAAAGATGTGCAGTGTTGACTACTCCGGCTTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 72 bp CGCAGAAAACTTCCCCACTGTCCCTGTTCTTCTGGCTaGCTTGGTACTGACCATTCTGGTCACACTGTAGGC +
Preference number: 6 (lower is better)
Translates to: RRKLPHCPCSSG*LGTDHSGHTVG
Trigger: GCCTACAGTGTGACCAGAATGGTCAGTACCAAGCCAGCCAGAAGAACAGGGACAGTGGGGAAGTTTTCTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 72 bp CTGGTTGCCTTCAGGCTGCCCATAGCATCTTGTTCCTaGTCAGAAGTCACGCAGGCAAAGTTGTCCCTTGTC +
Preference number: 6 (lower is better)
Translates to: LVAFRLPIASCS*SEVTQAKLSLV
Trigger: GACAAGGGACAACTTTGCCTGCGTGACTTCTGACCAGGAACAAGATGCTATGGGCAGCCTGAAGGCAACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS CCA 72 bp ATCATTCAGCACAACTTTCCTCCGGAAGAGGGCCGTTaGTTGGTGGGGCAGAATCTGACTGCAGTTCTTGGC +
Preference number: 6 (lower is better)
Translates to: IIQHNFPPEEGR*LVGQNLTAVLG
Trigger: GCCAAGAACTGCAGTCAGATTCTGCCCCACCAACCAACGGCCCTCTTCCGGAGGAAAGTTGTGCTGAATGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS CAA 72 bp CCCGAAACTGGTTGCCTTCAGGCTGCCCATAGCATCTaGTTCCTGGTCAGAAGTCACGCAGGCAAAGTTGTC +
Preference number: 6 (lower is better)
Translates to: PETGCLQAAHSI*FLVRSHAGKVV
Trigger: GACAACTTTGCCTGCGTGACTTCTGACCAGGAACAAGATGCTATGGGCAGCCTGAAGGCAACCAGTTTCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS CAA 72 bp CCAGAGGTAGACCTGCTGGAAGCTGGTAAAGCTGTCTaGAGTTCCTTCCAAGAGTGCCAGACCCTGCAGGAA +
Preference number: 6 (lower is better)
Translates to: PEVDLLEAGKAV*SSFQECQTLQE
Trigger: TTCCTGCAGGGTCTGGCACTCTTGGAAGGAACTCAAGACAGCTTTACCAGCTTCCAGCAGGTCTACCTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS CAA 90 bp GTTTCCATGCAGAAATCAACCCACTTGCTCTGGATAGCTCACAGTTaGTGGGACACTGGGGCATCTGTGAGGAGCGTGACATCAGCGAGC +
Preference number: 6 (lower is better)
Translates to: VSMQKSTHLLWIAHS*WDTGASVRSVTSAS
Trigger: GCTCGCTGATGTCACGCTCCTCACAGATGCCCCAGTGTCCCACAAACTGTGAGCTATCCAGAGCAAGTGGGTTGATTTCTGCATGGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CAA 90 bp CTGGAGGCAGACTGGTATGAACAGATCTCCCGGGCCTGGATTTCTTaGGGGTCCAGCCTGTTTCCATGCAGAAATCAACCCACTTGCTCT +
Preference number: 6 (lower is better)
Translates to: LEADWYEQISRAWIS*GSSLFPCRNQPTCS
Trigger: AGAGCAAGTGGGTTGATTTCTGCATGGAAACAGGCTGGACCCCAAAGAAATCCAGGCCCGGGAGATCTGTTCATACCAGTCTGCCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CAA 90 bp TGTGCATCCTTGGCTCCATCTGCATCCTTCAGAGTCTGGATGTACTaGGACCAGAAGGAGCAGTCAGCTTGTTTGAGGCCCTGCCGATTG +
Preference number: 6 (lower is better)
Translates to: CASLAPSASFRVWMY*DQKEQSACLRPCRL
Trigger: CAATCGGCAGGGCCTCAAACAAGCTGACTGCTCCTTCTGGTCCAAGTACATCCAGACTCTGAAGGATGCAGATGGAGCCAAGGATGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065916.14
ENSMUST00000166403.2
ENSMUST00000171045.9
CDS CCA 72 bp GAGTCCAGAGTCAACAAAGAGTTCCTTGATTCTGGGTaGGCAGGATGTGTCCGATCTGACACCACTCACAGG +
Preference number: 6 (lower is better)
Translates to: ESRVNKEFLDSG*AGCVRSDTTHR
Trigger: CCTGTGAGTGGTGTCAGATCGGACACATCCTGCCCACCCAGAATCAAGGAACTCTTTGTTGACTCTGGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 72 bp ACGGATCCAGGAAAATGTTCTCCCCAGGCGGAGTTGTaGCTCCCTCCAACACTACCTGTGGAACATCTTGAA +
Preference number: 6 (lower is better)
Translates to: TDPGKCSPQAEL*LPPTLPVEHLE
Trigger: TTCAAGATGTTCCACAGGTAGTGTTGGAGGGAGCCACAACTCCGCCTGGGGAGAACATTTTCCTGGATCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 72 bp AATTGGGGAGGAAGGTCAAGCTCCTCACTGGTCAGCTaGATTCCCTTGGCCACTAAGAAACTCTCTCCCAGT +
Preference number: 6 (lower is better)
Translates to: NWGGRSSSSLVS*IPLATKKLSPS
Trigger: ACTGGGAGAGAGTTTCTTAGTGGCCAAGGGAATCCAGCTGACCAGTGAGGAGCTTGACCTTCCTCCCCAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 72 bp GCATTTCACACAGCCCAGAGCATCCTGTCTGGTGGTTaGGACTCTGTAGAACCCTTCCATACATCCAAGCTG +
Preference number: 6 (lower is better)
Translates to: AFHTAQSILSGG*DSVEPFHTSKL
Trigger: CAGCTTGGATGTATGGAAGGGTTCTACAGAGTCCCAACCACCAGACAGGATGCTCTGGGCTGTGTGAAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 72 bp CTTCAGGGCATTTCACACAGCCCAGAGCATCCTGTCTaGTGGTTGGGACTCTGTAGAACCCTTCCATACATC +
Preference number: 6 (lower is better)
Translates to: LQGISHSPEHPV*WLGLCRTLPYI
Trigger: GATGTATGGAAGGGTTCTACAGAGTCCCAACCACCAGACAGGATGCTCTGGGCTGTGTGAAATGCCCTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CAA 72 bp CAGGAATCGTCTCTGCAATATCCGGTACATGGTGCTTaGAGTGAAGGTCGAGGCCTGGTCCAAGCCAGCAAA +
Preference number: 6 (lower is better)
Translates to: QESSLQYPVHGA*SEGRGLVQASK
Trigger: TTTGCTGGCTTGGACCAGGCCTCGACCTTCACTCAAAGCACCATGTACCGGATATTGCAGAGACGATTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CAA 72 bp CAGAAATCAACCCACTTGCTCTGGATAGCTCACAGTTaGTGGGACACTGGGGCATCTGTGAGGAGCGTGACA +
Preference number: 6 (lower is better)
Translates to: QKSTHLLWIAHS*WDTGASVRSVT
Trigger: TGTCACGCTCCTCACAGATGCCCCAGTGTCCCACAAACTGTGAGCTATCCAGAGCAAGTGGGTTGATTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CAA 72 bp GACTGGTATGAACAGATCTCCCGGGCCTGGATTTCTTaGGGGTCCAGCCTGTTTCCATGCAGAAATCAACCC +
Preference number: 6 (lower is better)
Translates to: DWYEQISRAWIS*GSSLFPCRNQP
Trigger: GGGTTGATTTCTGCATGGAAACAGGCTGGACCCCAAAGAAATCCAGGCCCGGGAGATCTGTTCATACCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CAA 72 bp TGTCTTGGAGTCCAGATGAAGCTGGAACCTGCCACTTaGGATCAGATCTGCAAAGCGCCCAAGGAGATCCTG +
Preference number: 6 (lower is better)
Translates to: CLGVQMKLEPAT*DQICKAPKEIL
Trigger: CAGGATCTCCTTGGGCGCTTTGCAGATCTGATCCAAAGTGGCAGGTTCCAGCTTCATCTGGACTCCAAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CAA 72 bp GGCATTTCACACAGCCCAGAGCATCCTGTCTGGTGGTaGGGACTCTGTAGAACCCTTCCATACATCCAAGCT +
Preference number: 6 (lower is better)
Translates to: GISHSPEHPVWW*GLCRTLPYIQA
Trigger: AGCTTGGATGTATGGAAGGGTTCTACAGAGTCCCAACCACCAGACAGGATGCTCTGGGCTGTGTGAAATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CAA 72 bp ATTCAGCACAACTTTCCTCCGGAAGAGGGCCGTTGGTaGGTGGGGCAGAATCTGACTGCAGTTCTTGGCATT +
Preference number: 6 (lower is better)
Translates to: IQHNFPPEEGRW*VGQNLTAVLGI
Trigger: AATGCCAAGAACTGCAGTCAGATTCTGCCCCACCAACCAACGGCCCTCTTCCGGAGGAAAGTTGTGCTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS CAA 72 bp TATCATTCAGCACAACTTTCCTCCGGAAGAGGGCCGTaGGTTGGTGGGGCAGAATCTGACTGCAGTTCTTGG +
Preference number: 6 (lower is better)
Translates to: YHSAQLSSGRGP*VGGAESDCSSW
Trigger: CCAAGAACTGCAGTCAGATTCTGCCCCACCAACCAACGGCCCTCTTCCGGAGGAAAGTTGTGCTGAATGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS CAA 72 bp TTGGCTCCATCTGCATCCTTCAGAGTCTGGATGTACTaGGACCAGAAGGAGCAGTCAGCTTGTTTGAGGCCC +
Preference number: 6 (lower is better)
Translates to: LAPSASFRVWMY*DQKEQSACLRP
Trigger: GGGCCTCAAACAAGCTGACTGCTCCTTCTGGTCCAAGTACATCCAGACTCTGAAGGATGCAGATGGAGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065916.14
ENSMUST00000166403.2
ENSMUST00000171045.9
CDS CAA 90 bp TTGGATGGCCAGGAATCGTCTCTGCAATATCCGGTACATGGTGCTTaGAGTGAAGGTCGAGGCCTGGTCCAAGCCAGCAAAAATGGTGTC +
Preference number: 6 (lower is better)
Translates to: LDGQESSLQYPVHGA*SEGRGLVQASKNGV
Trigger: GACACCATTTTTGCTGGCTTGGACCAGGCCTCGACCTTCACTCAAAGCACCATGTACCGGATATTGCAGAGACGATTCCTGGCCATCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CAA 90 bp AGAATCTTTCCAGAGGTAGACCTGCTGGAAGCTGGTAAAGCTGTCTaGAGTTCCTTCCAAGAGTGCCAGACCCTGCAGGAACTCTTGGCC +
Preference number: 6 (lower is better)
Translates to: RIFPEVDLLEAGKAV*SSFQECQTLQELLA
Trigger: GGCCAAGAGTTCCTGCAGGGTCTGGCACTCTTGGAAGGAACTCAAGACAGCTTTACCAGCTTCCAGCAGGTCTACCTCTGGAAAGATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS CAA 90 bp AAGTTACTGGTGGCTGCAGTGCTGATGTGGGCAACATCAAAGTGCTaGATGGATGGATCTACAATCACTGAAGACAGGGCCAGGGTCTGC +
Preference number: 6 (lower is better)
Translates to: KLLVAAVLMWATSKC*MDGSTITEDRARVC
Trigger: GCAGACCCTGGCCCTGTCTTCAGTGATTGTAGATCCATCCATCAAGCACTTTGATGTTGCCCACATCAGCACTGCAGCCACCAGTAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS CAA 90 bp ACCAGGTTCTCAGGGACAAACACATTGAGATATAAGCAGTCTTCATaGATTTGTGGAGGTGTGGGGGTACGGGTACCTGGCTGCCAGCAG +
Preference number: 6 (lower is better)
Translates to: TRFSGTNTLRYKQSS*ICGGVGVRVPGCQQ
Trigger: CTGCTGGCAGCCAGGTACCCGTACCCCCACACCTCCACAAATCAATGAAGACTGCTTATATCTCAATGTGTTTGTCCCTGAGAACCTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS CAA 90 bp GTTCGGCCTTGGCTCTCTTCAAATTGCTTCACAGCCTTTGCCCTATaGATAAGCCCATCATCCTGGGACCCTCCTATGAGTAGATCCACC +
Preference number: 6 (lower is better)
Translates to: VRPWLSSNCFTAFAL*ISPSSWDPPMSRST
Trigger: GGTGGATCTACTCATAGGAGGGTCCCAGGATGATGGGCTTATCAATAGGGCAAAGGCTGTGAAGCAATTTGAAGAGAGCCAAGGCCGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065916.14
ENSMUST00000166403.2
ENSMUST00000171045.9
CDS TCA 72 bp ACCCAGACACTTCAGGGAACCTGCCCCGGAAGGAACTaGAGGTCACAAATGCATCTGGAAACCTGTTGTAGT +
Preference number: 6 (lower is better)
Translates to: TQTLQGTCPGRN*RSQMHLETCCS
Trigger: ACTACAACAGGTTTCCAGATGCATTTGTGACCTTCAGTTCCTTCCGGGGCAGGTTCCCTGAAGTGTCTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS TCA 72 bp ATCGTCTCTGCAATATCCGGTACATGGTGCTTTGAGTaGAGGTCGAGGCCTGGTCCAAGCCAGCAAAAATGG +
Preference number: 6 (lower is better)
Translates to: IVSAISGTWCFE*RSRPGPSQQKW
Trigger: CCATTTTTGCTGGCTTGGACCAGGCCTCGACCTTCACTCAAAGCACCATGTACCGGATATTGCAGAGACGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS TCA 72 bp AGGAATCGTCTCTGCAATATCCGGTACATGGTGCTTTaGGTGAAGGTCGAGGCCTGGTCCAAGCCAGCAAAA +
Preference number: 6 (lower is better)
Translates to: RNRLCNIRYMVL*VKVEAWSKPAK
Trigger: TTTTGCTGGCTTGGACCAGGCCTCGACCTTCACTCAAAGCACCATGTACCGGATATTGCAGAGACGATTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS TCA 72 bp AAGGTGGTGTCCGCTGAGAATGTCTTGGAGTCCAGATaGAGCTGGAACCTGCCACTTTGGATCAGATCTGCA +
Preference number: 6 (lower is better)
Translates to: KVVSAENVLESR*SWNLPLWIRSA
Trigger: TGCAGATCTGATCCAAAGTGGCAGGTTCCAGCTTCATCTGGACTCCAAGACATTCTCAGCGGACACCACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS TCA 72 bp TGGTCATATGTCACCCCAGCACATGTAGCATTGGCCTaGGTAGCAGAGGTATCCCTCCAGTCATTGATGTGG +
Preference number: 6 (lower is better)
Translates to: WSYVTPAHVALA*VAEVSLQSLMW
Trigger: CCACATCAATGACTGGAGGGATACCTCTGCTACTCAGGCCAATGCTACATGTGCTGGGGTGACATATGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS GCA 72 bp CTGAGAATGTCTTGGAGTCCAGATGAAGCTGGAACCTaGCACTTTGGATCAGATCTGCAAAGCGCCCAAGGA +
Preference number: 6 (lower is better)
Translates to: LRMSWSPDEAGT*HFGSDLQSAQG
Trigger: TCCTTGGGCGCTTTGCAGATCTGATCCAAAGTGGCAGGTTCCAGCTTCATCTGGACTCCAAGACATTCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS GCA 72 bp GCAGAAGTCTTGGGCCATGGAGAAGTTACTGGTGGCTaGAGTGCTGATGTGGGCAACATCAAAGTGCTTGAT +
Preference number: 6 (lower is better)
Translates to: AEVLGHGEVTGG*SADVGNIKVLD
Trigger: ATCAAGCACTTTGATGTTGCCCACATCAGCACTGCAGCCACCAGTAACTTCTCCATGGCCCAAGACTTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS GCA 72 bp CCTGGGACCCACCCTGAAGCTGGCCAAAGGAATCAATaGGTACAGAAGGTGTGGATGTTACATCAGATTGGA +
Preference number: 6 (lower is better)
Translates to: PGTHPEAGQRNQ*VQKVWMLHQIG
Trigger: TCCAATCTGATGTAACATCCACACCTTCTGTACGCATTGATTCCTTTGGCCAGCTTCAGGGTGGGTCCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS GCA 72 bp CCAGGATGGAGCCATCAATGGTCAGCTGACCACCACTaGCTTCCATCTCCATGGTATTGTGGAAAAACACCA +
Preference number: 6 (lower is better)
Translates to: PGWSHQWSADHH*LPSPWYCGKTP
Trigger: TGGTGTTTTTCCACAATACCATGGAGATGGAAGGCAGTGGTGGTCAGCTGACCATTGATGGCTCCATCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS CCA 72 bp CCTACTACCCCAAGGAAAGCTTGTTCAGCCTGTAATTaGCAGACACTGGGACACTGCTTGGCTTCTCCAACT +
Preference number: 6 (lower is better)
Translates to: PTTPRKACSACN*QTLGHCLASPT
Trigger: AGTTGGAGAAGCCAAGCAGTGTCCCAGTGTCTGCCAATTACAGGCTGAACAAGCTTTCCTTGGGGTAGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 72 bp GAAGGTCAAGCTCCTCACTGGTCAGCTGGATTCCCTTaGCCACTAAGAAACTCTCTCCCAGTGGAAATGAAG +
Preference number: 6 (lower is better)
Translates to: EGQAPHWSAGFP*PLRNSLPVEMK
Trigger: CTTCATTTCCACTGGGAGAGAGTTTCTTAGTGGCCAAGGGAATCCAGCTGACCAGTGAGGAGCTTGACCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 72 bp AAATCAACCCACTTGCTCTGGATAGCTCACAGTTTGTaGGACACTGGGGCATCTGTGAGGAGCGTGACATCA +
Preference number: 6 (lower is better)
Translates to: KSTHLLWIAHSL*DTGASVRSVTS
Trigger: TGATGTCACGCTCCTCACAGATGCCCCAGTGTCCCACAAACTGTGAGCTATCCAGAGCAAGTGGGTTGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 72 bp CTTTGGATCAGATCTGCAAAGCGCCCAAGGAGATCCTaGCCCGTTACCGCCCTTTCAATGCTGTACAAATCT +
Preference number: 6 (lower is better)
Translates to: LWIRSAKRPRRS*PVTALSMLYKS
Trigger: AGATTTGTACAGCATTGAAAGGGCGGTAACGGGCCAGGATCTCCTTGGGCGCTTTGCAGATCTGATCCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 72 bp TGTGCATCCTTGGCTCCATCTGCATCCTTCAGAGTCTaGATGTACTTGGACCAGAAGGAGCAGTCAGCTTGT +
Preference number: 6 (lower is better)
Translates to: CASLAPSASFRV*MYLDQKEQSAC
Trigger: ACAAGCTGACTGCTCCTTCTGGTCCAAGTACATCCAGACTCTGAAGGATGCAGATGGAGCCAAGGATGCACA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065916.14
ENSMUST00000166403.2
ENSMUST00000171045.9
CDS CAA 72 bp CGGAGTGGCTGTGCATCTACCTGGTACTCAAAGATGTaGGCTGCTACCAGGCAGACTGAGCTCAACAAAGTA +
Preference number: 6 (lower is better)
Translates to: RSGCASTWYSKM*AATRQTELNKV
Trigger: TACTTTGTTGAGCTCAGTCTGCCTGGTAGCAGCCAACATCTTTGAGTACCAGGTAGATGCACAGCCACTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CAA 72 bp GACACTGGGACACTGCTTGGCTTCTCCAACTGTACTTaGAGTCCCAGGAATAACCTGGCCTTCAGTATCCAC +
Preference number: 6 (lower is better)
Translates to: DTGTLLGFSNCT*SPRNNLAFSIH
Trigger: GTGGATACTGAAGGCCAGGTTATTCCTGGGACTCAAAGTACAGTTGGAGAAGCCAAGCAGTGTCCCAGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CAA 72 bp GGAAGGTCAAGCTCCTCACTGGTCAGCTGGATTCCCTaGGCCACTAAGAAACTCTCTCCCAGTGGAAATGAA +
Preference number: 6 (lower is better)
Translates to: GRSSSSLVSWIP*ATKKLSPSGNE
Trigger: TTCATTTCCACTGGGAGAGAGTTTCTTAGTGGCCAAGGGAATCCAGCTGACCAGTGAGGAGCTTGACCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CAA 72 bp TGCACCAGCGGGGAGTCAGCACTGGGGACACTGGACTaGACTATCACAGGAGAATTAGCATCAAAGATAACC +
Preference number: 6 (lower is better)
Translates to: CTSGESALGTLD*TITGELASKIT
Trigger: GGTTATCTTTGATGCTAATTCTCCTGTGATAGTCAAGTCCAGTGTCCCCAGTGCTGACTCCCCGCTGGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CAA 72 bp GTGGCTGCAGTGCTGATGTGGGCAACATCAAAGTGCTaGATGGATGGATCTACAATCACTGAAGACAGGGCC +
Preference number: 6 (lower is better)
Translates to: VAAVLMWATSKC*MDGSTITEDRA
Trigger: GGCCCTGTCTTCAGTGATTGTAGATCCATCCATCAAGCACTTTGATGTTGCCCACATCAGCACTGCAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS CAA 90 bp AATTGGGGAGGAAGGTCAAGCTCCTCACTGGTCAGCTGGATTCCCTaGGCCACTAAGAAACTCTCTCCCAGTGGAAATGAAGAAGCATTG +
Preference number: 6 (lower is better)
Translates to: NWGGRSSSSLVSWIP*ATKKLSPSGNEEAL
Trigger: CAATGCTTCTTCATTTCCACTGGGAGAGAGTTTCTTAGTGGCCAAGGGAATCCAGCTGACCAGTGAGGAGCTTGACCTTCCTCCCCAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CAA 90 bp GTCAAGCACTGCACCAGCGGGGAGTCAGCACTGGGGACACTGGACTaGACTATCACAGGAGAATTAGCATCAAAGATAACCTTCGATTCT +
Preference number: 6 (lower is better)
Translates to: VKHCTSGESALGTLD*TITGELASKITFDS
Trigger: AGAATCGAAGGTTATCTTTGATGCTAATTCTCCTGTGATAGTCAAGTCCAGTGTCCCCAGTGCTGACTCCCCGCTGGTGCAGTGCTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CAA 90 bp CACTCTATCATTCAGCACAACTTTCCTCCGGAAGAGGGCCGTTGGTaGGTGGGGCAGAATCTGACTGCAGTTCTTGGCATTAGATTCCAT +
Preference number: 6 (lower is better)
Translates to: HSIIQHNFPPEEGRW*VGQNLTAVLGIRFH
Trigger: ATGGAATCTAATGCCAAGAACTGCAGTCAGATTCTGCCCCACCAACCAACGGCCCTCTTCCGGAGGAAAGTTGTGCTGAATGATAGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS TCA 72 bp ACACTGGGACACTGCTTGGCTTCTCCAACTGTACTTTaGGTCCCAGGAATAACCTGGCCTTCAGTATCCACA +
Preference number: 6 (lower is better)
Translates to: TLGHCLASPTVL*VPGITWPSVST
Trigger: TGTGGATACTGAAGGCCAGGTTATTCCTGGGACTCAAAGTACAGTTGGAGAAGCCAAGCAGTGTCCCAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS TCA 72 bp AGCCCACTGAGATGTCCTCAAGCTGTAACTTCCACGTaGCATTTACTCCTAAACGCTCTGCAGTCAGACACC +
Preference number: 6 (lower is better)
Translates to: SPLRCPQAVTST*HLLLNALQSDT
Trigger: GGTGTCTGACTGCAGAGCGTTTAGGAGTAAATGTCACGTGGAAGTTACAGCTTGAGGACATCTCAGTGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS GCA 72 bp TTGCTCCACTCTCCTCATTGCATGTTTGAATCCCCATaGTGTTCAGAGTCAGACAGGTCACCTCTCCTCCTT +
Preference number: 6 (lower is better)
Translates to: LLHSPHCMFESP*CSESDRSPLLL
Trigger: AAGGAGGAGAGGTGACCTGTCTGACTCTGAACAGCATGGGGATTCAAACATGCAATGAGGAGAGTGGAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS GCA 72 bp AGTCCAAAATGCGCCAGGTTGCTCCACTCTCCTCATTaGATGTTTGAATCCCCATGCTGTTCAGAGTCAGAC +
Preference number: 6 (lower is better)
Translates to: SPKCARLLHSPH*MFESPCCSESD
Trigger: GTCTGACTCTGAACAGCATGGGGATTCAAACATGCAATGAGGAGAGTGGAGCAACCTGGCGCATTTTGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS GCA 72 bp CTGGTGGCTGCAGTGCTGATGTGGGCAACATCAAAGTaGTTGATGGATGGATCTACAATCACTGAAGACAGG +
Preference number: 6 (lower is better)
Translates to: LVAAVLMWATSK*LMDGSTITEDR
Trigger: CCTGTCTTCAGTGATTGTAGATCCATCCATCAAGCACTTTGATGTTGCCCACATCAGCACTGCAGCCACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS CCA 72 bp TTAGTGGGGCACCGAAATCTGCCAGAGATGACTAATTaGATGGCCAGGAATCGTCTCTGCAATATCCGGTAC +
Preference number: 6 (lower is better)
Translates to: LVGHRNLPEMTN*MARNRLCNIRY
Trigger: GTACCGGATATTGCAGAGACGATTCCTGGCCATCCAATTAGTCATCTCTGGCAGATTTCGGTGCCCCACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 72 bp GTGCTTCTTGTACCAAGGGCTCCTGACAAGTTAAACTaGGCAGCATTCGCCAAAAATGTCCCTCCAAACAGG +
Preference number: 6 (lower is better)
Translates to: VLLVPRAPDKLN*AAFAKNVPPNR
Trigger: CCTGTTTGGAGGGACATTTTTGGCGAATGCTGCCCAGTTTAACTTGTCAGGAGCCCTTGGTACAAGAAGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 72 bp AGGCAAGCAGACAGTAGGTGTGTGTATCTGTCAGATTaGCTCCTGAGGCTGAGAACACCACAGGGCTATATA +
Preference number: 6 (lower is better)
Translates to: RQADSRCVYLSD*LLRLRTPQGYI
Trigger: TATATAGCCCTGTGGTGTTCTCAGCCTCAGGAGCCAATCTGACAGATACACACACCTACTGTCTGCTTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS CCA 72 bp GCCATGGAGAAGTTACTGGTGGCTGCAGTGCTGATGTaGGCAACATCAAAGTGCTTGATGGATGGATCTACA +
Preference number: 6 (lower is better)
Translates to: AMEKLLVAAVLM*ATSKCLMDGST
Trigger: TGTAGATCCATCCATCAAGCACTTTGATGTTGCCCACATCAGCACTGCAGCCACCAGTAACTTCTCCATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS CAA 90 bp CCAACTTCCAAGTCTTCCTCTTCACTCTTGGTTAACTGTGCATCCTaGGCTCCATCTGCATCCTTCAGAGTCTGGATGTACTTGGACCAG +
Preference number: 6 (lower is better)
Translates to: PTSKSSSSLLVNCAS*APSASFRVWMYLDQ
Trigger: CTGGTCCAAGTACATCCAGACTCTGAAGGATGCAGATGGAGCCAAGGATGCACAGTTAACCAAGAGTGAAGAGGAAGACTTGGAAGTTGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065916.14
ENSMUST00000166403.2
ENSMUST00000171045.9
CDS TCA 72 bp CCTGAGGTTGAAGTGTTCCAAAGGCATGTTAAAGTCTaGGTAGGGACCTGGGTATTGGCTGAGCTGACCATT +
Preference number: 6 (lower is better)
Translates to: PEVEVFQRHVKV*VGTWVLAELTI
Trigger: AATGGTCAGCTCAGCCAATACCCAGGTCCCTACTCAGACTTTAACATGCCTTTGGAACACTTCAACCTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS TCA 72 bp GCTGTCACCATTGAGAAAATACAAGGTGGTGTCCGCTaGGAATGTCTTGGAGTCCAGATGAAGCTGGAACCT +
Preference number: 6 (lower is better)
Translates to: AVTIEKIQGGVR*ECLGVQMKLEP
Trigger: AGGTTCCAGCTTCATCTGGACTCCAAGACATTCTCAGCGGACACCACCTTGTATTTTCTCAATGGTGACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS TCA 72 bp AACATCAAAGTGCTTGATGGATGGATCTACAATCACTaGAGACAGGGCCAGGGTCTGCCAAGAGTCCGAAGT +
Preference number: 6 (lower is better)
Translates to: NIKVLDGWIYNH*RQGQGLPRVRS
Trigger: ACTTCGGACTCTTGGCAGACCCTGGCCCTGTCTTCAGTGATTGTAGATCCATCCATCAAGCACTTTGATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS GCA 72 bp CTTCCATCTTCAGAGCACTGGGGAACATATTCAGCCTaGTTCAGAAAGGCCTTCTCTCTTTGTAGCTCACAG +
Preference number: 6 (lower is better)
Translates to: LPSSEHWGTYSA*FRKAFSLCSSQ
Trigger: CTGTGAGCTACAAAGAGAGAAGGCCTTTCTGAAGCAGGCTGAATATGTTCCCCAGTGCTCTGAAGATGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 72 bp CAAGGAAAGCTTGTTCAGCCTGTAATTGGCAGACACTaGGACACTGCTTGGCTTCTCCAACTGTACTTTGAG +
Preference number: 6 (lower is better)
Translates to: QGKLVQPVIGRH*DTAWLLQLYFE
Trigger: CTCAAAGTACAGTTGGAGAAGCCAAGCAGTGTCCCAGTGTCTGCCAATTACAGGCTGAACAAGCTTTCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 72 bp AATAAATTTCAGGACACGAAGTTTCACTTCCTCACATaGGCCAGGACATGCTGGGATCTCGCCTGGCTTAGT +
Preference number: 6 (lower is better)
Translates to: NKFQDTKFHFLT*ARTCWDLAWLS
Trigger: ACTAAGCCAGGCGAGATCCCAGCATGTCCTGGCCCATGTGAGGAAGTGAAACTTCGTGTCCTGAAATTTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 72 bp GATAGAAAGTCAAGGTGGACTGAGCAGCCAAGCGAATaGCATATTCACCCCCACGTAGAAACTTCTCAGAGA +
Preference number: 6 (lower is better)
Translates to: DRKSRWTEQPSE*HIHPHVETSQR
Trigger: TCTCTGAGAAGTTTCTACGTGGGGGTGAATATGCCATTCGCTTGGCTGCTCAGTCCACCTTGACTTTCTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 72 bp CAATGGTCAGCTGACCACCACTGCCTTCCATCTCCATaGTATTGTGGAAAAACACCAGAACTGATGCATTGG +
Preference number: 6 (lower is better)
Translates to: QWSADHHCLPSP*YCGKTPELMHW
Trigger: CCAATGCATCAGTTCTGGTGTTTTTCCACAATACCATGGAGATGGAAGGCAGTGGTGGTCAGCTGACCATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS CAA 72 bp TCCCTGTCACAGAGCCGCTCACACTCAAAGAACCCATaGGAAATGAGTTTTCCAGACATGGGGACTTTGTCT +
Preference number: 6 (lower is better)
Translates to: SLSQSRSHSKNP*EMSFPDMGTLS
Trigger: AGACAAAGTCCCCATGTCTGGAAAACTCATTTCCAATGGGTTCTTTGAGTGTGAGCGGCTCTGTGACAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS CAA 72 bp TCAGGGACAAACACATTGAGATATAAGCAGTCTTCATaGATTTGTGGAGGTGTGGGGGTACGGGTACCTGGC +
Preference number: 6 (lower is better)
Translates to: SGTNTLRYKQSS*ICGGVGVRVPG
Trigger: GCCAGGTACCCGTACCCCCACACCTCCACAAATCAATGAAGACTGCTTATATCTCAATGTGTTTGTCCCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS CAA 90 bp TTCTCTGCCATCAGAATCCACACACCAGCAAGATTGACCATCATTTaGGCATTGGACTGTCTGGAAACTTCCATCTTCAGAGCACTGGGG +
Preference number: 6 (lower is better)
Translates to: FSAIRIHTPARLTII*ALDCLETSIFRALG
Trigger: CCCCAGTGCTCTGAAGATGGAAGTTTCCAGACAGTCCAATGCCAAAATGATGGTCAATCTTGCTGGTGTGTGGATTCTGATGGCAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CAA 90 bp GCTGCCAGGTACTTCTCTGCCATCAGAATCCACACACCAGCAAGATaGACCATCATTTTGGCATTGGACTGTCTGGAAACTTCCATCTTC +
Preference number: 6 (lower is better)
Translates to: AARYFSAIRIHTPAR*TIILALDCLETSIF
Trigger: GAAGATGGAAGTTTCCAGACAGTCCAATGCCAAAATGATGGTCAATCTTGCTGGTGTGTGGATTCTGATGGCAGAGAAGTACCTGGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CAA 90 bp TCTTCTTCTAATCCAGGTCCAACTTCCAAGTCTTCCTCTTCACTCTaGGTTAACTGTGCATCCTTGGCTCCATCTGCATCCTTCAGAGTC +
Preference number: 6 (lower is better)
Translates to: SSSNPGPTSKSSSSL*VNCASLAPSASFRV
Trigger: GACTCTGAAGGATGCAGATGGAGCCAAGGATGCACAGTTAACCAAGAGTGAAGAGGAAGACTTGGAAGTTGGACCTGGATTAGAAGAAGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065916.14
ENSMUST00000166403.2
ENSMUST00000171045.9
CDS TCA 72 bp GCACTGTATATCCTCATAGCTTCCTCCAGCAGTGCATaGTGGGACAAAGAACTTCCCAGGCATCTGTTTACA +
Preference number: 6 (lower is better)
Translates to: ALYILIASSSSA*WDKELPRHLFT
Trigger: TGTAAACAGATGCCTGGGAAGTTCTTTGTCCCATCATGCACTGCTGGAGGAAGCTATGAGGATATACAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 72 bp ATGAACTTTTTGTTATGTCTGCAAGTTGACAGAAAATaGGCTCCTGGGCACACCGAGAAAGGCACCACAGGT +
Preference number: 6 (lower is better)
Translates to: MNFLLCLQVDRK*APGHTEKGTTG
Trigger: ACCTGTGGTGCCTTTCTCGGTGTGCCCAGGAGCCCATTTTCTGTCAACTTGCAGACATAACAAAAAGTTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS CCA 72 bp AGTCTTCCTCTTCACTCTTGGTTAACTGTGCATCCTTaGCTCCATCTGCATCCTTCAGAGTCTGGATGTACT +
Preference number: 6 (lower is better)
Translates to: SLPLHSWLTVHP*LHLHPSESGCT
Trigger: AGTACATCCAGACTCTGAAGGATGCAGATGGAGCCAAGGATGCACAGTTAACCAAGAGTGAAGAGGAAGACT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065916.14
ENSMUST00000166403.2
ENSMUST00000171045.9
CDS CAA 72 bp AAGTCTTCCTCTTCACTCTTGGTTAACTGTGCATCCTaGGCTCCATCTGCATCCTTCAGAGTCTGGATGTAC +
Preference number: 6 (lower is better)
Translates to: KSSSSLLVNCAS*APSASFRVWMY
Trigger: GTACATCCAGACTCTGAAGGATGCAGATGGAGCCAAGGATGCACAGTTAACCAAGAGTGAAGAGGAAGACTT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065916.14
ENSMUST00000166403.2
ENSMUST00000171045.9
CDS TCA 72 bp AGAACTTCCCAGGCATCTGTTTACAGGCTTGAGCACTaGACACCATTTCCATCACATCTCCTAAATCTCTCG +
Preference number: 6 (lower is better)
Translates to: RTSQASVYRLEH*TPFPSHLLNLS
Trigger: CGAGAGATTTAGGAGATGTGATGGAAATGGTGTTCAGTGCTCAAGCCTGTAAACAGATGCCTGGGAAGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS TCA 72 bp GGGACAAAGAACTTCCCAGGCATCTGTTTACAGGCTTaGGCACTGAACACCATTTCCATCACATCTCCTAAA +
Preference number: 6 (lower is better)
Translates to: GTKNFPGICLQA*ALNTISITSPK
Trigger: TTTAGGAGATGTGATGGAAATGGTGTTCAGTGCTCAAGCCTGTAAACAGATGCCTGGGAAGTTCTTTGTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS TCA 72 bp TCTGGAGCTTTGTCAAATTTCCGTATCATCAGACACTaGGATTCTGAGAGTCCAGCCTCTGTCTGTAACCAC +
Preference number: 6 (lower is better)
Translates to: SGALSNFRIIRH*DSESPASVCNH
Trigger: GTGGTTACAGACAGAGGCTGGACTCTCAGAATCTCAGTGTCTGATGATACGGAAATTTGACAAAGCTCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS GCA 72 bp TTGAAAACCCGTTGGTTCGAAGCTCTTCTGACCAGCTaGAGTAGATTCATAGCCTTTCTTCACATACACAGC +
Preference number: 6 (lower is better)
Translates to: LKTRWFEALLTS*SRFIAFLHIHS
Trigger: GCTGTGTATGTGAAGAAAGGCTATGAATCTACTGCAGCTGGTCAGAAGAGCTTCGAACCAACGGGTTTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS CAA 72 bp GGGGACTTTGTCTCTGATGGAAATCCCTGTGAGCTTTaGGAATGGCAGGCGAGTATAAAAGTTCTTCACTCT +
Preference number: 6 (lower is better)
Translates to: GDFVSDGNPCEL*EWQASIKVLHS
Trigger: AGAGTGAAGAACTTTTATACTCGCCTGCCATTCCAAAAGCTCACAGGGATTTCCATCAGAGACAAAGTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS CAA 90 bp TCCAGACATGGGGACTTTGTCTCTGATGGAAATCCCTGTGAGCTTTaGGAATGGCAGGCGAGTATAAAAGTTCTTCACTCTATCATTCAG +
Preference number: 6 (lower is better)
Translates to: SRHGDFVSDGNPCEL*EWQASIKVLHSIIQ
Trigger: CTGAATGATAGAGTGAAGAACTTTTATACTCGCCTGCCATTCCAAAAGCTCACAGGGATTTCCATCAGAGACAAAGTCCCCATGTCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS CAA 90 bp CCTTCCATCTCCATGGTATTGTGGAAAAACACCAGAACTGATGCATaGGAGACCAGGTTCTCAGGGACAAACACATTGAGATATAAGCAG +
Preference number: 6 (lower is better)
Translates to: PSISMVLWKNTRTDA*ETRFSGTNTLRYKQ
Trigger: CTGCTTATATCTCAATGTGTTTGTCCCTGAGAACCTGGTCTCCAATGCATCAGTTCTGGTGTTTTTCCACAATACCATGGAGATGGAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS CAA 72 bp TCCATGGTATTGTGGAAAAACACCAGAACTGATGCATaGGAGACCAGGTTCTCAGGGACAAACACATTGAGA +
Preference number: 6 (lower is better)
Translates to: SMVLWKNTRTDA*ETRFSGTNTLR
Trigger: TCTCAATGTGTTTGTCCCTGAGAACCTGGTCTCCAATGCATCAGTTCTGGTGTTTTTCCACAATACCATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS CAA 90 bp CCCTTGGCCACTAAGAAACTCTCTCCCAGTGGAAATGAAGAAGCATaGGAGGCTGAGACAATCTCTTCTGTTTCCTTAATAAATTTCAGG +
Preference number: 6 (lower is better)
Translates to: PLATKKLSPSGNEEA*EAETISSVSLINFR
Trigger: CCTGAAATTTATTAAGGAAACAGAAGAGATTGTCTCAGCCTCCAATGCTTCTTCATTTCCACTGGGAGAGAGTTTCTTAGTGGCCAAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CAA 72 bp AGATCAAAAATCATCATGTCTGTGGTATTGACAAACTaGCACTGGACAGGCATAAACTCCCCATCTGCAGTG +
Preference number: 6 (lower is better)
Translates to: RSKIIMSVVLTN*HWTGINSPSAV
Trigger: CACTGCAGATGGGGAGTTTATGCCTGTCCAGTGCAAGTTTGTCAATACCACAGACATGATGATTTTTGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS TCA 72 bp AAATACAAAGATGAACTTTTTGTTATGTCTGCAAGTTaGCAGAAAATGGGCTCCTGGGCACACCGAGAAAGG +
Preference number: 6 (lower is better)
Translates to: KYKDELFVMSAS*QKMGSWAHRER
Trigger: CCTTTCTCGGTGTGCCCAGGAGCCCATTTTCTGTCAACTTGCAGACATAACAAAAAGTTCATCTTTGTATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000065916.14
ENSMUST00000171045.9
CDS CCA 72 bp CACAGGAGAATTAGCATCAAAGATAACCTTCGATTCTaGAGCTTTGTCAAATTTCCGTATCATCAGACACTG +
Preference number: 6 (lower is better)
Translates to: HRRISIKDNLRF*SFVKFPYHQTL
Trigger: CAGTGTCTGATGATACGGAAATTTGACAAAGCTCCAGAATCGAAGGTTATCTTTGATGCTAATTCTCCTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CAA 72 bp ACTAAGAAACTCTCTCCCAGTGGAAATGAAGAAGCATaGGAGGCTGAGACAATCTCTTCTGTTTCCTTAATA +
Preference number: 6 (lower is better)
Translates to: TKKLSPSGNEEA*EAETISSVSLI
Trigger: TATTAAGGAAACAGAAGAGATTGTCTCAGCCTCCAATGCTTCTTCATTTCCACTGGGAGAGAGTTTCTTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CCA 72 bp AGTTCCAGGAGAGAAACGAGAAATTTTAAGGCATCTTaGTTCTCTTGTAGGTTGACTTTGAAGCCAAAGTTA +
Preference number: 6 (lower is better)
Translates to: SSRRETRNFKAS*FSCRLTLKPKL
Trigger: TAACTTTGGCTTCAAAGTCAACCTACAAGAGAACCAAGATGCCTTAAAATTTCTCGTTTCTCTCCTGGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14
CDS CAA 72 bp ACGAGAAATTTTAAGGCATCTTGGTTCTCTTGTAGGTaGACTTTGAAGCCAAAGTTACCCACAACTCGTTTA +
Preference number: 6 (lower is better)
Translates to: TRNFKASWFSCR*TLKPKLPTTRL
Trigger: TAAACGAGTTGTGGGTAACTTTGGCTTCAAAGTCAACCTACAAGAGAACCAAGATGCCTTAAAATTTCTCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065916.14