Pregenerated sensors for TFRC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022797Ensembl transcript IDs: ENSMUST00000023486.15, ENSMUST00000120680.2
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GATCAGATGGAGACGGGGCAATCTCCAACTACCCAACTACCACGTTaGCCCTCCACAAGCACACTCTTTCTCCTACCTCAAAAGACACTA | + |
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Preference number: 1 (lower is better) Translates to: DQMETGQSPTTQLPR*PSTSTLFLLPQKTL Trigger: TAGTGTCTTTTGAGGTAGGAGAAAGAGTGTGCTTGTGGAGGGTCAACGTGGTAGTTGGGTAGTTGGAGATTGCCCCGTCTCCATCTGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| 3UTR TCA 90 bp | GTGGTGCATGCCTTTAATTCCAGCACTTTGGAGGCAGAAGGTGAATaGATCTTTGTAGCCTGGGCTACAAAGCAAGTTCCAGGACACTAC | + |
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Preference number: 1 (lower is better) Translates to: VVHAFNSSTLEAEGE*IFVAWATKQVPGHY Trigger: GTAGTGTCCTGGAACTTGCTTTGTAGCCCAGGCTACAAAGATTCATTCACCTTCTGCCTCCAAAGTGCTGGAATTAAAGGCATGCACCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120680.2 |
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| 3UTR TCA 90 bp | AAAATGCATGCCTTCATTCAAGACTTGGAATCCCATTATGCACGGTaGTACTCATACTGGTACAAGAGAAACACTGTGAAGACTGAAGGG | + |
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Preference number: 1 (lower is better) Translates to: KMHAFIQDLESHYAR*YSYWYKRNTVKTEG Trigger: CCCTTCAGTCTTCACAGTGTTTCTCTTGTACCAGTATGAGTATCACCGTGCATAATGGGATTCCAAGTCTTGAATGAAGGCATGCATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| 3UTR TCA 90 bp | AGATCCACATTTCACCCAAGACTAAACCTTACCAACTTACTGCTTTaGCTGGAAACACCACTTACAACAAAGGTTATTTCACAGAGACGT | + |
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Preference number: 1 (lower is better) Translates to: RSTFHPRLNLTNLLL*LETPLTTKVISQRR Trigger: ACGTCTCTGTGAAATAACCTTTGTTGTAAGTGGTGTTTCCAGTCAAAGCAGTAAGTTGGTAAGGTTTAGTCTTGGGTGAAATGTGGATCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| 3UTR GCA 90 bp | CACCACTTACAACAAAGGTTATTTCACAGAGACGTCTATGTAAAATaGATGCCTTCATTCAAGACTTGGAATCCCATTATGCACGGTGAT | + |
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Preference number: 1 (lower is better) Translates to: HHLQQRLFHRDVYVK*MPSFKTWNPIMHGD Trigger: ATCACCGTGCATAATGGGATTCCAAGTCTTGAATGAAGGCATGCATTTTACATAGACGTCTCTGTGAAATAACCTTTGTTGTAAGTGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| 3UTR TCA 90 bp | ACCTATTTTCAACCTTGCTGGCAAGAAAACAAGTTCCATCTCTTCTaGAAGTTACTGTCTAATTTAGGGAAATGCAAACCAGCTACATCC | + |
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Preference number: 1 (lower is better) Translates to: TYFQPCWQENKFHLF*KLLSNLGKCKPATS Trigger: GGATGTAGCTGGTTTGCATTTCCCTAAATTAGACAGTAACTTTCAGAAGAGATGGAACTTGTTTTCTTGCCAGCAAGGTTGAAAATAGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| 3UTR-3UTR TCA 90 bp | ATTTCACCCAAGACTAAACCTTACCAACTTACTGCTTTGACTGGAAACACCACTGTGGCAGCTTTGAACTaGCCCCATGGCAAAACTGAT | + |
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Preference number: 2 (lower is better) Translates to: ISPKTKPYQLTALTGNTTVAALN*PHGKTD Trigger: ATCAGTTTTGCCATGGGGTCAGTTCAAAGCTGCCAC...AGTGGTGTTTCCAGTCAAAGCAGTAAGTTGGTAAGGTTTAGTCTTGGGTGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| 3UTR CAA 90 bp | GCCACCATAGTGATGAGCAGGTACATAAAGATCCTTTTGCAAGCTTaGTCTTCCCAACACCCATTATTCTCTACTTTCTACCCTCCCAAA | + |
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Preference number: 2 (lower is better) Translates to: ATIVMSRYIKILLQA*SSQHPLFSTFYPPK Trigger: TTTGGGAGGGTAGAAAGTAGAGAATAATGGGTGTTGGGAAGACAAAGCTTGCAAAAGGATCTTTATGTACCTGCTCATCACTATGGTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| 3UTR-3UTR TCA 90 bp | GAGATCACTGTCTCCGATATAGACACTGTGGTAGGCAAAAACTACCTTGTTCTTGATAGAAAGCTTTCCTaGAGACTAACACTTTGGCCA | + |
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Preference number: 2 (lower is better) Translates to: EITVSDIDTVVGKNYLVLDRKLS*RLTLWP Trigger: TGGCCAAAGTGTTAGTCTTCAGGAAAGCTTTCTATC...AAGAACAAGGTAGTTTTTGCCTACCACAGTGTCTATATCGGAGACAGTGATCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| 3UTR CAA 90 bp | CAGATCCACATTTCACCCAAGACTAAACCTTACCAACTTACTGCTTaGACTGGAAACACCACTTACAACAAAGGTTATTTCACAGAGACG | + |
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Preference number: 2 (lower is better) Translates to: QIHISPKTKPYQLTA*TGNTTYNKGYFTET Trigger: CGTCTCTGTGAAATAACCTTTGTTGTAAGTGGTGTTTCCAGTCAAAGCAGTAAGTTGGTAAGGTTTAGTCTTGGGTGAAATGTGGATCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| 3UTR-3UTR TCA 90 bp | TGCATGCCTTCATTCAAGACTTGGAATCCCATTATGCACGGTGATACTCATACTACCATAGCCTTTAAATaGCATTTAACTTGGCCACAA | + |
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Preference number: 2 (lower is better) Translates to: CMPSFKTWNPIMHGDTHTTIAFK*HLTWPQ Trigger: TTGTGGCCAAGTTAAATGTCATTTAAAGGCTATGGT...AGTATGAGTATCACCGTGCATAATGGGATTCCAAGTCTTGAATGAAGGCATGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| 3UTR-3UTR GCA 90 bp | TGCATGCCTTCATTCAAGACTTGGAATCCCATTATGCACGGTGATACTCATACTACCTATTTTCAACCTTaGTGGCAAGAAAACAAGTTC | + |
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Preference number: 2 (lower is better) Translates to: CMPSFKTWNPIMHGDTHTTYFQP*WQENKF Trigger: GAACTTGTTTTCTTGCCAGCAAGGTTGAAAATAGGT...AGTATGAGTATCACCGTGCATAATGGGATTCCAAGTCTTGAATGAAGGCATGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| 3UTR-3UTR CCA 90 bp | CATTTCAGCAAAGACAGTATAGGTTGGCAAGTCCAAACCAAAAGGCATTCAAAATATTTTCAACCTTGCTaGCAAGAAAACAAGTTCCAT | + |
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Preference number: 2 (lower is better) Translates to: HFSKDSIGWQVQTKRHSKYFQPC*QENKFH Trigger: ATGGAACTTGTTTTCTTGCCAGCAAGGTTGAAAATA...TTTTGAATGCCTTTTGGTTTGGACTTGCCAACCTATACTGTCTTTGCTGAAATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| 3UTR-3UTR GCA 90 bp | CTAGTCTTTGTTAATGTGATCTTGCTCATTACCTACATAATTCATAGCCACCATTCTAATTTAGGGAAATaGAAACCAGCTACATCCTTA | + |
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Preference number: 2 (lower is better) Translates to: LVFVNVILLITYIIHSHHSNLGK*KPATSL Trigger: TAAGGATGTAGCTGGTTTGCATTTCCCTAAATTAGA...ATGGTGGCTATGAATTATGTAGGTAATGAGCAAGATCACATTAACAAAGACTAG 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| 3UTR TCA 72 bp | GCCTTTAATTCCAGCACTTTGGAGGCAGAAGGTGAATaGATCTTTGTAGCCTGGGCTACAAAGCAAGTTCCA | + |
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Preference number: 3 (lower is better) Translates to: AFNSSTLEAEGE*IFVAWATKQVP Trigger: TGGAACTTGCTTTGTAGCCCAGGCTACAAAGATTCATTCACCTTCTGCCTCCAAAGTGCTGGAATTAAAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120680.2 |
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| 3UTR TCA 72 bp | CACGGTGATACTCATACTGGTACAAGAGAAACACTGTaGAGACTGAAGGGACTGAGTAGCAAAACAACTCAG | + |
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Preference number: 3 (lower is better) Translates to: HGDTHTGTRETL*RLKGLSSKTTQ Trigger: CTGAGTTGTTTTGCTACTCAGTCCCTTCAGTCTTCACAGTGTTTCTCTTGTACCAGTATGAGTATCACCGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| 3UTR TCA 72 bp | GCCTTCATTCAAGACTTGGAATCCCATTATGCACGGTaGTACTCATACTGGTACAAGAGAAACACTGTGAAG | + |
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Preference number: 3 (lower is better) Translates to: AFIQDLESHYAR*YSYWYKRNTVK Trigger: CTTCACAGTGTTTCTCTTGTACCAGTATGAGTATCACCGTGCATAATGGGATTCCAAGTCTTGAATGAAGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| 3UTR GCA 72 bp | AATGCATGCCTTCATTCAAGACTTGGAATCCCATTATaGACGGTGATACTCATACTGGTACAAGAGAAACAC | + |
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Preference number: 3 (lower is better) Translates to: NACLHSRLGIPL*TVILILVQEKH Trigger: GTGTTTCTCTTGTACCAGTATGAGTATCACCGTGCATAATGGGATTCCAAGTCTTGAATGAAGGCATGCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| 3UTR CCA 72 bp | GACGTCTATGTAAAATGCATGCCTTCATTCAAGACTTaGAATCCCATTATGCACGGTGATACTCATACTGGT | + |
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Preference number: 3 (lower is better) Translates to: DVYVKCMPSFKT*NPIMHGDTHTG Trigger: ACCAGTATGAGTATCACCGTGCATAATGGGATTCCAAGTCTTGAATGAAGGCATGCATTTTACATAGACGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| 3UTR-3UTR CAA 90 bp | TGGCAAGTCCAAACCAAAAGGCATTCAAAAGCTAACACAGTAAAGGTCATGCAAGGAAAGTGTTATCCATaGTACTTGAAGTGTAGGTCC | + |
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Preference number: 3 (lower is better) Translates to: WQVQTKRHSKANTVKVMQGKCYP*YLKCRS Trigger: GGACCTACACTTCAAGTACAATGGATAACACTTTCC...TTGCATGACCTTTACTGTGTTAGCTTTTGAATGCCTTTTGGTTTGGACTTGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| 3UTR-3UTR CAA 90 bp | CATTTCAGCAAAGACAGTATAGGTTGGCAAGTCCAAACCAAAAGGCATTCAAAAAAGAGGAGAGAAAACTaGAGGTCTTTGGCTTCTGGT | + |
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Preference number: 3 (lower is better) Translates to: HFSKDSIGWQVQTKRHSKKRREN*RSLASG Trigger: ACCAGAAGCCAAAGACCTCAAGTTTTCTCTCCTCTT...TTTTGAATGCCTTTTGGTTTGGACTTGCCAACCTATACTGTCTTTGCTGAAATG 41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| 3UTR-3UTR CAA 90 bp | CATTTCAGCAAAGACAGTATAGGTTGGCAAGTCCAAACCAAAAGGCATTCAAAATCTTCCTTCCTAAAGTaGCAAGTGCTGACCATAAGT | + |
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Preference number: 3 (lower is better) Translates to: HFSKDSIGWQVQTKRHSKSSFLK*QVLTIS Trigger: ACTTATGGTCAGCACTTGCAACTTTAGGAAGGAAGA...TTTTGAATGCCTTTTGGTTTGGACTTGCCAACCTATACTGTCTTTGCTGAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| 3UTR-3UTR CAA 90 bp | TGCATGCCTTCATTCAAGACTTGGAATCCCATTATGCACGGTGATACTCATACTCTCATATTATTTGGATaGTGGCATTCTTCCTTCCTA | + |
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Preference number: 3 (lower is better) Translates to: CMPSFKTWNPIMHGDTHTLILFG*WHSSFL Trigger: TAGGAAGGAAGAATGCCACAATCCAAATAATATGAG...AGTATGAGTATCACCGTGCATAATGGGATTCCAAGTCTTGAATGAAGGCATGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| 3UTR-3UTR CAA 90 bp | TGCATGCCTTCATTCAAGACTTGGAATCCCATTATGCACGGTGATACTCATACTTACATAAAGATCCTTTaGCAAGCTTTGTCTTCCCAA | + |
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Preference number: 3 (lower is better) Translates to: CMPSFKTWNPIMHGDTHTYIKIL*QALSSQ Trigger: TTGGGAAGACAAAGCTTGCAAAAGGATCTTTATGTA...AGTATGAGTATCACCGTGCATAATGGGATTCCAAGTCTTGAATGAAGGCATGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| 3UTR-3UTR CAA 90 bp | CATTTCAGCAAAGACAGTATAGGTTGGCAAGTCCAAACCAAAAGGCATTCAAAAGACCTATTTTCAACCTaGCTGGCAAGAAAACAAGTT | + |
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Preference number: 3 (lower is better) Translates to: HFSKDSIGWQVQTKRHSKDLFST*LARKQV Trigger: AACTTGTTTTCTTGCCAGCAAGGTTGAAAATAGGTC...TTTTGAATGCCTTTTGGTTTGGACTTGCCAACCTATACTGTCTTTGCTGAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| 3UTR TCA 72 bp | CAACCTTGCTGGCAAGAAAACAAGTTCCATCTCTTCTaGAAGTTACTGTCTAATTTAGGGAAATGCAAACCA | + |
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Preference number: 3 (lower is better) Translates to: QPCWQENKFHLF*KLLSNLGKCKP Trigger: TGGTTTGCATTTCCCTAAATTAGACAGTAACTTTCAGAAGAGATGGAACTTGTTTTCTTGCCAGCAAGGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| 3UTR TCA 72 bp | CTTTATGCATTATGGAAGACACTGCTCCCGATAATGTaGGTTAAGTTTGTGACAAAGGTACTGGAAATTTTG | + |
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Preference number: 3 (lower is better) Translates to: LYALWKTLLPIM*VKFVTKVLEIL Trigger: CAAAATTTCCAGTACCTTTGTCACAAACTTAACTCACATTATCGGGAGCAGTGTCTTCCATAATGCATAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| 3UTR GCA 72 bp | CAACAAAGGTTATTTCACAGAGACGTCTATGTAAAATaGATGCCTTCATTCAAGACTTGGAATCCCATTATG | + |
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Preference number: 3 (lower is better) Translates to: QQRLFHRDVYVK*MPSFKTWNPIM Trigger: CATAATGGGATTCCAAGTCTTGAATGAAGGCATGCATTTTACATAGACGTCTCTGTGAAATAACCTTTGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| 3UTR-3UTR CAA 90 bp | TATTTAACCCAATCCTCTTCTAGCTCATATTATTTGGATTGTGGCATTCTTCCTTCAGGACATATAGCATaGTTCTTACAACTGGTTCTG | + |
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Preference number: 3 (lower is better) Translates to: YLTQSSSSSYYLDCGILPSGHIA*FLQLVL Trigger: CAGAACCAGTTGTAAGAACAATGCTATATGTCCTGA...AGGAAGAATGCCACAATCCAAATAATATGAGCTAGAAGAGGATTGGGTTAAATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| 3UTR TCA 72 bp | AATTTTGTAGATGTAAGTACTACCATAGCCTTTAAATaGCATTTAACTTGGCCACAACTCACTGCACTTAGG | + |
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Preference number: 3 (lower is better) Translates to: NFVDVSTTIAFK*HLTWPQLTALR Trigger: CCTAAGTGCAGTGAGTTGTGGCCAAGTTAAATGTCATTTAAAGGCTATGGTAGTACTTACATCTACAAAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| CDS-3UTR TCA 90 bp | TCCTTAAGGGCATACAGCTCAATGGAAGATCAGATGGAGACGGGGCAATCTCCAGCATTTGCGACTCCCTaGATAGTCCAAGTAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: SLRAYSSMEDQMETGQSPAFATP*IVQVAR Trigger: CCTGGCTACTTGGACTATTCAGGGAGTCGCAAATGC...TGGAGATTGCCCCGTCTCCATCTGATCTTCCATTGAGCTGTATGCCCTTAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| CDS-3UTR CCA 90 bp | TCCTTAAGGGCATACAGCTCAATGGAAGATCAGATGGAGACGGGGCAATCTCCACGCCTGCAGTCCAGCTaGCAAAGATTATACTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: SLRAYSSMEDQMETGQSPRLQSS*QRLYFC Trigger: GCAGAAGTATAATCTTTGCCAGCTGGACTGCAGGCG...TGGAGATTGCCCCGTCTCCATCTGATCTTCCATTGAGCTGTATGCCCTTAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| CDS-3UTR TCA 90 bp | ATGGAGATCACTGTCTCCGATATAGACACTGTGGTAGGCAAAAACTACCTTGTTAAAGCTGAGAGAGTGTaGGAGCCAGAGCCCCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: MEITVSDIDTVVGKNYLVKAERV*EPEPQK Trigger: CTTCTGGGGCTCTGGCTCTCACACTCTCTCAGCTTT...AACAAGGTAGTTTTTGCCTACCACAGTGTCTATATCGGAGACAGTGATCTCCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| CDS-3UTR TCA 90 bp | TCCTTAAGGGCATACAGCTCAATGGAAGATCAGATGGAGACGGGGCAATCTCCAATGGTCACCATGTTTTaGCCAATGCTGCTTTTCACT | + |
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Preference number: 4 (lower is better) Translates to: SLRAYSSMEDQMETGQSPMVTMF*PMLLFT Trigger: AGTGAAAAGCAGCATTGGTCAAAACATGGTGACCAT...TGGAGATTGCCCCGTCTCCATCTGATCTTCCATTGAGCTGTATGCCCTTAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| CDS-3UTR CCA 90 bp | TCCTTAAGGGCATACAGCTCAATGGAAGATCAGATGGAGACGGGGCAATCTCCACATCCTCTGTTTCCATaGTTTCTGACTTGTCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: SLRAYSSMEDQMETGQSPHPLFP*FLTCLS Trigger: AGACAGACAAGTCAGAAACCATGGAAACAGAGGATG...TGGAGATTGCCCCGTCTCCATCTGATCTTCCATTGAGCTGTATGCCCTTAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| CDS-3UTR CCA 90 bp | GAGATCACTGTCTCCGATATAGACACTGTGGTAGGCAAAAACTACCTTGTTCTTCCTCCAACCACTCAGTaGCACCAACAGCTCCAAAGT | + |
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Preference number: 4 (lower is better) Translates to: EITVSDIDTVVGKNYLVLPPTTQ*HQQLQS Trigger: ACTTTGGAGCTGTTGGTGCCACTGAGTGGTTGGAGG...AAGAACAAGGTAGTTTTTGCCTACCACAGTGTCTATATCGGAGACAGTGATCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| CDS-3UTR TCA 90 bp | ATGGAGATCACTGTCTCCGATATAGACACTGTGGTAGGCAAAAACTACCTTGTTTCTGGCTCAGCTGCTTaGTGGTGTCAGCAAACTCTA | + |
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Preference number: 4 (lower is better) Translates to: MEITVSDIDTVVGKNYLVSGSAA*WCQQTL Trigger: TAGAGTTTGCTGACACCATCAAGCAGCTGAGCCAGA...AACAAGGTAGTTTTTGCCTACCACAGTGTCTATATCGGAGACAGTGATCTCCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| CDS-3UTR GCA 90 bp | TCCTTAAGGGCATACAGCTCAATGGAAGATCAGATGGAGACGGGGCAATCTCCAATTTTCTTCTTCATCTaGAGCCAGTTTCATCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: SLRAYSSMEDQMETGQSPIFFFI*SQFHLH Trigger: GTGGAGATGAAACTGGCTGCAGATGAAGAAGAAAAT...TGGAGATTGCCCCGTCTCCATCTGATCTTCCATTGAGCTGTATGCCCTTAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| 3UTR CAA 72 bp | AGGGCAGATGCCAAGAGGAGAGAAAACTTGAGGTCTTaGGCTTCTGGTCTCATCATAAAGAACACCAAGGTT | + |
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Preference number: 4 (lower is better) Translates to: RADAKRRENLRS*ASGLIIKNTKV Trigger: AACCTTGGTGTTCTTTATGATGAGACCAGAAGCCAAAGACCTCAAGTTTTCTCTCCTCTTGGCATCTGCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| CDS-3UTR GCA 90 bp | ATGGAGATCACTGTCTCCGATATAGACACTGTGGTAGGCAAAAACTACCTTGTTAGCATGTCCAAAGAGTaGAAGGTCTGCCTCAACAAC | + |
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Preference number: 4 (lower is better) Translates to: MEITVSDIDTVVGKNYLVSMSKE*KVCLNN Trigger: GTTGTTGAGGCAGACCTTGCACTCTTTGGACATGCT...AACAAGGTAGTTTTTGCCTACCACAGTGTCTATATCGGAGACAGTGATCTCCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| CDS-3UTR CCA 90 bp | CAAAGCTACACAAGAGAAAAACGATCTGTGATAGGTAGCCTCACAACAATATCACCTCCAACCACTCAGTaGCACCAACAGCTCCAAAGT | + |
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Preference number: 4 (lower is better) Translates to: QSYTREKRSVIGSLTTISPPTTQ*HQQLQS Trigger: ACTTTGGAGCTGTTGGTGCCACTGAGTGGTTGGAGG...TGATATTGTTGTGAGGCTACCTATCACAGATCGTTTTTCTCTTGTGTAGCTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120680.2 |
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| CDS-3UTR CCA 90 bp | ATGGAGATCACTGTCTCCGATATAGACACTGTGGTAGGCAAAAACTACCTTGTTGAAAGGAGACTCTCTTaGAGATACATAGGGCGACAG | + |
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Preference number: 4 (lower is better) Translates to: MEITVSDIDTVVGKNYLVERRLS*RYIGRQ Trigger: CTGTCGCCCTATGTATCTCCAAGAGAGTCTCCTTTC...AACAAGGTAGTTTTTGCCTACCACAGTGTCTATATCGGAGACAGTGATCTCCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| CDS-3UTR CCA 90 bp | TGGCAAGTCCAAACCAAAAGGCATTCAAAAGCTAACACAGTAAAGGTCATGCAAGTAGCCAGGGCCAACTaGTTTCTGAAGAGGGTTTCA | + |
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Preference number: 4 (lower is better) Translates to: WQVQTKRHSKANTVKVMQVARAN*FLKRVS Trigger: TGAAACCCTCTTCAGAAACCAGTTGGCCCTGGCTAC...TTGCATGACCTTTACTGTGTTAGCTTTTGAATGCCTTTTGGTTTGGACTTGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| CDS-3UTR TCA 90 bp | TGGTGCATGCCTTTAATTCCAGCACTTTGGAGGCAGAAGGTGAATGAATCTTTGCAAGTTAGAGAATGCTaGTCTGGCTTGATCCATCAT | + |
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Preference number: 4 (lower is better) Translates to: WCMPLIPALWRQKVNESLQVREC*SGLIHH Trigger: ATGATGGATCAAGCCAGATCAGCATTCTCTAACTTG...CAAAGATTCATTCACCTTCTGCCTCCAAAGTGCTGGAATTAAAGGCATGCACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120680.2 |
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| CDS-3UTR TCA 90 bp | TGGCAAGTCCAAACCAAAAGGCATTCAAAAGCTAACACAGTAAAGGTCATGCAATGTTTCCATGGTTTCTaGCTTGTCTGTCTCCTCCGT | + |
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Preference number: 4 (lower is better) Translates to: WQVQTKRHSKANTVKVMQCFHGF*LVCLLR Trigger: ACGGAGGAGACAGACAAGTCAGAAACCATGGAAACA...TTGCATGACCTTTACTGTGTTAGCTTTTGAATGCCTTTTGGTTTGGACTTGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| CDS-3UTR TCA 90 bp | CAAAGCTACACAAGAGAAAAACGATCTGTGATAGGTAGCCTCACAACAATATCATCTGGCTCAGCTGCTTaGTGGTGTCAGCAAACTCTA | + |
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Preference number: 4 (lower is better) Translates to: QSYTREKRSVIGSLTTISSGSAA*WCQQTL Trigger: TAGAGTTTGCTGACACCATCAAGCAGCTGAGCCAGA...TGATATTGTTGTGAGGCTACCTATCACAGATCGTTTTTCTCTTGTGTAGCTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120680.2 |
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| CDS-3UTR TCA 90 bp | TGGCAAGTCCAAACCAAAAGGCATTCAAAAGCTAACACAGTAAAGGTCATGCAATCACCAGTTCCTAGATaGGCATGTCCAAAGAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: WQVQTKRHSKANTVKVMQSPVPR*ACPKSA Trigger: TGCACTCTTTGGACATGCTCATCTAGGAACTGGTGA...TTGCATGACCTTTACTGTGTTAGCTTTTGAATGCCTTTTGGTTTGGACTTGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| CDS-3UTR TCA 90 bp | TGGTGCATGCCTTTAATTCCAGCACTTTGGAGGCAGAAGGTGAATGAATCTTTGGAAACTGAGTATGATTaGAAGAAGGAAAGCCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: WCMPLIPALWRQKVNESLETEYD*KKESQV Trigger: CACCTGGCTTTCCTTCTTTCAATCATACTCAGTTTC...CAAAGATTCATTCACCTTCTGCCTCCAAAGTGCTGGAATTAAAGGCATGCACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120680.2 |
||
| CDS-3UTR GCA 90 bp | TCCTTAAGGGCATACAGCTCAATGGAAGATCAGATGGAGACGGGGCAATCTCCATTTCCATCAACTGGATaGTTTACATCTTGCATTATC | + |
|
Preference number: 4 (lower is better) Translates to: SLRAYSSMEDQMETGQSPFPSTG*FTSCII Trigger: GATAATGCAAGATGTAAAGCATCCAGTTGATGGAAA...TGGAGATTGCCCCGTCTCCATCTGATCTTCCATTGAGCTGTATGCCCTTAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| CDS-3UTR CCA 90 bp | TGGTGCATGCCTTTAATTCCAGCACTTTGGAGGCAGAAGGTGAATGAATCTTTGCATCCTCTGTTTCCATaGTTTCTGACTTGTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: WCMPLIPALWRQKVNESLHPLFP*FLTCLS Trigger: AGACAGACAAGTCAGAAACCATGGAAACAGAGGATG...CAAAGATTCATTCACCTTCTGCCTCCAAAGTGCTGGAATTAAAGGCATGCACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120680.2 |
||
| CDS-3UTR CCA 90 bp | ATTTCACCCAAGACTAAACCTTACCAACTTACTGCTTTGACTGGAAACACCACTGGAGTGTATGTATTCTaGCTCAGCTGCTTGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ISPKTKPYQLTALTGNTTGVYVF*LSCLMV Trigger: CACCATCAAGCAGCTGAGCCAGAATACATACACTCC...AGTGGTGTTTCCAGTCAAAGCAGTAAGTTGGTAAGGTTTAGTCTTGGGTGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| CDS-3UTR CCA 90 bp | CTACAAAGCTACACAAGAGAAAAACGATCTGTGATAGGTAGCCTCACAACAATACGCCTGCAGTCCAGCTaGCAAAGATTATACTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LQSYTREKRSVIGSLTTIRLQSS*QRLYFC Trigger: GCAGAAGTATAATCTTTGCCAGCTGGACTGCAGGCG...TATTGTTGTGAGGCTACCTATCACAGATCGTTTTTCTCTTGTGTAGCTTTGTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120680.2 |
||
| 3UTR CAA 72 bp | GCCACCATAGTGATGAGCAGGTACATAAAGATCCTTTaGCAAGCTTTGTCTTCCCAACACCCATTATTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ATIVMSRYIKIL*QALSSQHPLFS Trigger: AGAGAATAATGGGTGTTGGGAAGACAAAGCTTGCAAAAGGATCTTTATGTACCTGCTCATCACTATGGTGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| CDS-3UTR TCA 90 bp | ATGGAGATCACTGTCTCCGATATAGACACTGTGGTAGGCAAAAACTACCTTGTTCAAGTTAGAGAATGCTaGTCTGGCTTGATCCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: MEITVSDIDTVVGKNYLVQVREC*SGLIHH Trigger: ATGATGGATCAAGCCAGATCAGCATTCTCTAACTTG...AACAAGGTAGTTTTTGCCTACCACAGTGTCTATATCGGAGACAGTGATCTCCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| CDS-3UTR TCA 90 bp | CTACAAAGCTACACAAGAGAAAAACGATCTGTGATAGGTAGCCTCACAACAATATCACCAGTTCCTAGATaGGCATGTCCAAAGAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LQSYTREKRSVIGSLTTISPVPR*ACPKSA Trigger: TGCACTCTTTGGACATGCTCATCTAGGAACTGGTGA...TATTGTTGTGAGGCTACCTATCACAGATCGTTTTTCTCTTGTGTAGCTTTGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120680.2 |
||
| CDS-3UTR GCA 90 bp | CAAAGCTACACAAGAGAAAAACGATCTGTGATAGGTAGCCTCACAACAATATCAAGCATGTCCAAAGAGTaGAAGGTCTGCCTCAACAAC | + |
|
Preference number: 4 (lower is better) Translates to: QSYTREKRSVIGSLTTISSMSKE*KVCLNN Trigger: GTTGTTGAGGCAGACCTTGCACTCTTTGGACATGCT...TGATATTGTTGTGAGGCTACCTATCACAGATCGTTTTTCTCTTGTGTAGCTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120680.2 |
||
| CDS-3UTR GCA 90 bp | GAGATCACTGTCTCCGATATAGACACTGTGGTAGGCAAAAACTACCTTGTTCTTTGGGATTCCAGAATATaGAAGGAAAGGATATGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EITVSDIDTVVGKNYLVLWDSRI*KERICS Trigger: GCTGCATATCCTTTCCTTGCATATTCTGGAATCCCA...AAGAACAAGGTAGTTTTTGCCTACCACAGTGTCTATATCGGAGACAGTGATCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| CDS-3UTR CCA 90 bp | CAAAGCTACACAAGAGAAAAACGATCTGTGATAGGTAGCCTCACAACAATATCAGGAGTGTATGTATTCTaGCTCAGCTGCTTGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QSYTREKRSVIGSLTTISGVYVF*LSCLMV Trigger: CACCATCAAGCAGCTGAGCCAGAATACATACACTCC...TGATATTGTTGTGAGGCTACCTATCACAGATCGTTTTTCTCTTGTGTAGCTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120680.2 |
||
| 3UTR CAA 72 bp | AGATATCACAAACATGGAAAGTGTTATCCATTGTACTaGAAGTGTAGGTCCAACCCCGCACTAAAAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RYHKHGKCYPLY*KCRSNPALKAA Trigger: AGCAGCTTTTAGTGCGGGGTTGGACCTACACTTCAAGTACAATGGATAACACTTTCCATGTTTGTGATATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| CDS-3UTR TCA 90 bp | TGCATGCCTTCATTCAAGACTTGGAATCCCATTATGCACGGTGATACTCATACTAGTTTCATCTCCACATaGCTGTTATCTCCATCTACT | + |
|
Preference number: 4 (lower is better) Translates to: CMPSFKTWNPIMHGDTHTSFIST*LLSPST Trigger: AGTAGATGGAGATAACAGTCATGTGGAGATGAAACT...AGTATGAGTATCACCGTGCATAATGGGATTCCAAGTCTTGAATGAAGGCATGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| CDS-3UTR TCA 90 bp | CATTTCAGCAAAGACAGTATAGGTTGGCAAGTCCAAACCAAAAGGCATTCAAAAAGACTTTCATCTTTTTaGGATCCAGCCTCACGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HFSKDSIGWQVQTKRHSKRLSSF*DPASRG Trigger: TCCTCGTGAGGCTGGATCTCAAAAAGATGAAAGTCT...TTTTGAATGCCTTTTGGTTTGGACTTGCCAACCTATACTGTCTTTGCTGAAATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| CDS-3UTR TCA 90 bp | CTACAAAGCTACACAAGAGAAAAACGATCTGTGATAGGTAGCCTCACAACAATAAGACTTTCATCTTTTTaGGATCCAGCCTCACGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LQSYTREKRSVIGSLTTIRLSSF*DPASRG Trigger: TCCTCGTGAGGCTGGATCTCAAAAAGATGAAAGTCT...TATTGTTGTGAGGCTACCTATCACAGATCGTTTTTCTCTTGTGTAGCTTTGTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000120680.2 |
||
| CDS-3UTR TCA 90 bp | CAAAGCTACACAAGAGAAAAACGATCTGTGATAGGTAGCCTCACAACAATATCATTCTGCAGCAGCTCTTaGGATTGTTTGCACAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: QSYTREKRSVIGSLTTISFCSSS*DCLHRY Trigger: ATACCTGTGCAAACAATCTCAAGAGCTGCTGCAGAA...TGATATTGTTGTGAGGCTACCTATCACAGATCGTTTTTCTCTTGTGTAGCTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120680.2 |
||
| CDS-3UTR GCA 90 bp | TGGCATTCTTCCTTCCTAAAGTTGCAAGTGCTGACCATAAGTGCAAAACTTCCAGCTCTTGAGATTGTTTaGACAGGTATATTAGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: WHSSFLKLQVLTISAKLPALEIV*TGILGN Trigger: GTTGCCTAATATACCTGTGCAAACAATCTCAAGAGC...TGGAAGTTTTGCACTTATGGTCAGCACTTGCAACTTTAGGAAGGAAGAATGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| CDS-3UTR TCA 90 bp | AGCTACACAAGAGAAAAACGATCTGTGATAGGTAGCCTCACAACAATATCAAGAATGGTCACCATGTTTTaGCCAATGCTGCTTTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: SYTREKRSVIGSLTTISRMVTMF*PMLLFT Trigger: AGTGAAAAGCAGCATTGGTCAAAACATGGTGACCAT...TCTTGATATTGTTGTGAGGCTACCTATCACAGATCGTTTTTCTCTTGTGTAGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120680.2 |
||
| CDS-3UTR TCA 90 bp | CATTTCAGCAAAGACAGTATAGGTTGGCAAGTCCAAACCAAAAGGCATTCAAAAGAAACTGAGTATGATTaGAAGAAGGAAAGCCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: HFSKDSIGWQVQTKRHSKETEYD*KKESQV Trigger: CACCTGGCTTTCCTTCTTTCAATCATACTCAGTTTC...TTTTGAATGCCTTTTGGTTTGGACTTGCCAACCTATACTGTCTTTGCTGAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| 3UTR CAA 72 bp | CTGAGAAGATATCACAAACATGGAAAGTGTTATCCATaGTACTTGAAGTGTAGGTCCAACCCCGCACTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LRRYHKHGKCYP*YLKCRSNPALK Trigger: TTTTAGTGCGGGGTTGGACCTACACTTCAAGTACAATGGATAACACTTTCCATGTTTGTGATATCTTCTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| CDS-3UTR TCA 90 bp | CTACAAAGCTACACAAGAGAAAAACGATCTGTGATAGGTAGCCTCACAACAATAAGTTTCATCTCCACATaGCTGTTATCTCCATCTACT | + |
|
Preference number: 4 (lower is better) Translates to: LQSYTREKRSVIGSLTTISFIST*LLSPST Trigger: AGTAGATGGAGATAACAGTCATGTGGAGATGAAACT...TATTGTTGTGAGGCTACCTATCACAGATCGTTTTTCTCTTGTGTAGCTTTGTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120680.2 |
||
| CDS-3UTR TCA 90 bp | TATTTAACCCAATCCTCTTCTAGCTCATATTATTTGGATTGTGGCATTCTTCCTTTCTGCAGCAGCTCTTaGGATTGTTTGCACAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: YLTQSSSSSYYLDCGILPFCSSS*DCLHRY Trigger: ATACCTGTGCAAACAATCTCAAGAGCTGCTGCAGAA...AGGAAGAATGCCACAATCCAAATAATATGAGCTAGAAGAGGATTGGGTTAAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| CDS-3UTR GCA 90 bp | AGCTACACAAGAGAAAAACGATCTGTGATAGGTAGCCTCACAACAATATCAAGAATTTTCTTCTTCATCTaGAGCCAGTTTCATCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SYTREKRSVIGSLTTISRIFFFI*SQFHLH Trigger: GTGGAGATGAAACTGGCTGCAGATGAAGAAGAAAAT...TCTTGATATTGTTGTGAGGCTACCTATCACAGATCGTTTTTCTCTTGTGTAGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120680.2 |
||
| CDS-3UTR GCA 90 bp | TGGCAAGTCCAAACCAAAAGGCATTCAAAAGCTAACACAGTAAAGGTCATGCAAAAAGCTTTGGGCATTTaGAACCTTTTCTGCAAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: WQVQTKRHSKANTVKVMQKALGI*NLFCKS Trigger: ACTTTTGCAGAAAAGGTTGCAAATGCCCAAAGCTTT...TTGCATGACCTTTACTGTGTTAGCTTTTGAATGCCTTTTGGTTTGGACTTGCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| CDS-3UTR GCA 90 bp | CAAAGCTACACAAGAGAAAAACGATCTGTGATAGGTAGCCTCACAACAATATCAGCTCTTGAGATTGTTTaGACAGGTATATTAGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: QSYTREKRSVIGSLTTISALEIV*TGILGN Trigger: GTTGCCTAATATACCTGTGCAAACAATCTCAAGAGC...TGATATTGTTGTGAGGCTACCTATCACAGATCGTTTTTCTCTTGTGTAGCTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120680.2 |
||
| CDS-3UTR GCA 90 bp | TGCATGCCTTCATTCAAGACTTGGAATCCCATTATGCACGGTGATACTCATACTAAAACAAAAAGAAACTaGTGGGATTCCAGAATATGC | + |
|
Preference number: 4 (lower is better) Translates to: CMPSFKTWNPIMHGDTHTKTKRN*WDSRIC Trigger: GCATATTCTGGAATCCCAGCAGTTTCTTTTTGTTTT...AGTATGAGTATCACCGTGCATAATGGGATTCCAAGTCTTGAATGAAGGCATGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| CDS-3UTR GCA 90 bp | CTACAAAGCTACACAAGAGAAAAACGATCTGTGATAGGTAGCCTCACAACAATAAAAGCTTTGGGCATTTaGAACCTTTTCTGCAAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LQSYTREKRSVIGSLTTIKALGI*NLFCKS Trigger: ACTTTTGCAGAAAAGGTTGCAAATGCCCAAAGCTTT...TATTGTTGTGAGGCTACCTATCACAGATCGTTTTTCTCTTGTGTAGCTTTGTAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000120680.2 |
||
| CDS-3UTR GCA 90 bp | AGCTACACAAGAGAAAAACGATCTGTGATAGGTAGCCTCACAACAATATCAAGATATGAGGACACCAATTaGATTAAAGCTTTGGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: SYTREKRSVIGSLTTISRYEDTN*IKALGI Trigger: AATGCCCAAAGCTTTAATGCAATTGGTGTCCTCATA...TCTTGATATTGTTGTGAGGCTACCTATCACAGATCGTTTTTCTCTTGTGTAGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120680.2 |
||
| CDS-3UTR CCA 90 bp | ATTTCACCCAAGACTAAACCTTACCAACTTACTGCTTTGACTGGAAACACCACTAGATTTTCCATCAACTaGATGCTTTACATCTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ISPKTKPYQLTALTGNTTRFSIN*MLYILH Trigger: ATGCAAGATGTAAAGCATCCAGTTGATGGAAAATCT...AGTGGTGTTTCCAGTCAAAGCAGTAAGTTGGTAAGGTTTAGTCTTGGGTGAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| 3UTR CAA 72 bp | ATATTATTTGGATTGTGGCATTCTTCCTTCCTAAAGTaGCAAGTGCTGACCATAAGTGCAAAACTTCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: ILFGLWHSSFLK*QVLTISAKLPV Trigger: TACTGGAAGTTTTGCACTTATGGTCAGCACTTGCAACTTTAGGAAGGAAGAATGCCACAATCCAAATAATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| 3UTR CAA 72 bp | ATTTCACCCAAGACTAAACCTTACCAACTTACTGCTTaGACTGGAAACACCACTTACAACAAAGGTTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: ISPKTKPYQLTA*TGNTTYNKGYF Trigger: GAAATAACCTTTGTTGTAAGTGGTGTTTCCAGTCAAAGCAGTAAGTTGGTAAGGTTTAGTCTTGGGTGAAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| CDS-3UTR GCA 90 bp | AAGTTACTGTCTAATTTAGGGAAATGCAAACCAGCTACATCCTTAAGGGCATACTGTTTTGACCAATGCTaGTTTTCACTTGAATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KLLSNLGKCKPATSLRAYCFDQC*FSLESS Trigger: TGAAGATTCAAGTGAAAAGCAGCATTGGTCAAAACA...GTATGCCCTTAAGGATGTAGCTGGTTTGCATTTCCCTAAATTAGACAGTAACTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| CDS-3UTR GCA 90 bp | CAAAGCTACACAAGAGAAAAACGATCTGTGATAGGTAGCCTCACAACAATATCATGTTTTGACCAATGCTaGTTTTCACTTGAATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QSYTREKRSVIGSLTTISCFDQC*FSLESS Trigger: TGAAGATTCAAGTGAAAAGCAGCATTGGTCAAAACA...TGATATTGTTGTGAGGCTACCTATCACAGATCGTTTTTCTCTTGTGTAGCTTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120680.2 |
||
| CDS-3UTR CCA 90 bp | TATTTAACCCAATCCTCTTCTAGCTCATATTATTTGGATTGTGGCATTCTTCCTCATTTGACTGCACTATaGTCACCATGTTTTGACCAA | + |
|
Preference number: 4 (lower is better) Translates to: YLTQSSSSSYYLDCGILPHLTAL*SPCFDQ Trigger: TTGGTCAAAACATGGTGACCATAGTGCAGTCAAATG...AGGAAGAATGCCACAATCCAAATAATATGAGCTAGAAGAGGATTGGGTTAAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| CDS-3UTR GCA 90 bp | CTAGTCTTTGTTAATGTGATCTTGCTCATTACCTACATAATTCATAGCCACCATAAGTTACCATTTGACTaGACTATGGTCACCATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LVFVNVILLITYIIHSHHKLPFD*TMVTMF Trigger: AAACATGGTGACCATAGTGCAGTCAAATGGTAACTT...ATGGTGGCTATGAATTATGTAGGTAATGAGCAAGATCACATTAACAAAGACTAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| CDS-3UTR GCA 90 bp | CTAGTCTTTGTTAATGTGATCTTGCTCATTACCTACATAATTCATAGCCACCATTATGAGGACACCAATTaGATTAAAGCTTTGGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: LVFVNVILLITYIIHSHHYEDTN*IKALGI Trigger: AATGCCCAAAGCTTTAATGCAATTGGTGTCCTCATA...ATGGTGGCTATGAATTATGTAGGTAATGAGCAAGATCACATTAACAAAGACTAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| CDS CCA 90 bp | CTGAGAATACTTGGGCAAGTTTCAACAGAAGACCTGTTCCCACACTaGACTTCGCCGCAACACCAGCACCCAAAGCGTCTCTCTGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LRILGQVSTEDLFPH*TSPQHQHPKRLSGL Trigger: GAGCCCAGAGAGACGCTTTGGGTGCTGGTGTTGCGGCGAAGTCCAGTGTGGGAACAGGTCTTCTGTTGAAACTTGCCCAAGTATTCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023486.15 ENSMUST00000120680.2 |
||
| CDS TCA 90 bp | TTGTCGGCATTTTCTTCTTCATCTGCAGCCAGTTTCATCTCCACATaGCTGTTATCTCCATCTACTTGCCGAGCAAGGCTAAACCGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LSAFSSSSAASFIST*LLSPSTCRARLNRV Trigger: CACCCGGTTTAGCCTTGCTCGGCAAGTAGATGGAGATAACAGTCATGTGGAGATGAAACTGGCTGCAGATGAAGAAGAAAATGCCGACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023486.15 ENSMUST00000120680.2 |
||
| CDS TCA 90 bp | GAGATCCAGCCTCACGAGGAGTGTATGTATTCTGGCTCAGCTGCTTaGTGGTGTCAGCAAACTCTATGGAGTTCAACTTCTCTGACAACA | + |
|
Preference number: 5 (lower is better) Translates to: EIQPHEECMYSGSAA*WCQQTLWSSTSLTT Trigger: TGTTGTCAGAGAAGTTGAACTCCATAGAGTTTGCTGACACCATCAAGCAGCTGAGCCAGAATACATACACTCCTCGTGAGGCTGGATCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023486.15 ENSMUST00000120680.2 |
||
| CDS TCA 90 bp | TTGTCAATATTCCAAATGTCACCAGAGAGGGCATTTGCGACTCCCTaGATAGTCCAAGTAGCCAGGGCCAACTGGTTTCTGAAGAGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LSIFQMSPERAFATP*IVQVARANWFLKRV Trigger: AACCCTCTTCAGAAACCAGTTGGCCCTGGCTACTTGGACTATTCAGGGAGTCGCAAATGCCCTCTCTGGTGACATTTGGAATATTGACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| CDS GCA 90 bp | AACGTCATGGGTAAGTTTAATAATGAGCTGACCAGCCACTTCCGCTaGTGTACGAACCATTTGGTTGAGCTGAGGAACTTTCTGAGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: NVMGKFNNELTSHFR*CTNHLVELRNFLSQ Trigger: TTGACTCAGAAAGTTCCTCAGCTCAACCAAATGGTTCGTACAGCAGCGGAAGTGGCTGGTCAGCTCATTATTAAACTTACCCATGACGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| CDS CCA 90 bp | CCTCGGGAGACTCCACTGGGTCTAAGTTACCATTTGACTGCACTATaGTCACCATGTTTTGACCAATGCTGCTTTTCACTTGAATCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PRETPLGLSYHLTAL*SPCFDQCCFSLESS Trigger: TGAAGATTCAAGTGAAAAGCAGCATTGGTCAAAACATGGTGACCATAGTGCAGTCAAATGGTAACTTAGACCCAGTGGAGTCTCCCGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023486.15 ENSMUST00000120680.2 |
||
| CDS GCA 90 bp | TGCTGTACGAACCATTTGGTTGAGCTGAGGAACTTTCTGAGTCAATaGCTCATAGGTATCCAATCTAGTGCCCAAATAAGGATAGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CCTNHLVELRNFLSQ*LIGIQSSAQIRIVC Trigger: GCAGACTATCCTTATTTGGGCACTAGATTGGATACCTATGAGGCATTGACTCAGAAAGTTCCTCAGCTCAACCAAATGGTTCGTACAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| CDS-3UTR CAA 90 bp | TGGTGCATGCCTTTAATTCCAGCACTTTGGAGGCAGAAGGTGAATGAATCTTTGAAGACTTTCATCTTTTaGAGATCCAGCCTCACGAGG | + |
|
Preference number: 5 (lower is better) Translates to: WCMPLIPALWRQKVNESLKTFIF*RSSLTR Trigger: CCTCGTGAGGCTGGATCTCAAAAAGATGAAAGTCTT...CAAAGATTCATTCACCTTCTGCCTCCAAAGTGCTGGAATTAAAGGCATGCACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120680.2 |
||
| CDS-3UTR CAA 90 bp | ATGGAGATCACTGTCTCCGATATAGACACTGTGGTAGGCAAAAACTACCTTGTTCTTCCATTAAACCTCTaGGGTTTTCTGACACTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: MEITVSDIDTVVGKNYLVLPLNL*GFLTLA Trigger: GGCTAGTGTCAGAAAACCCAAGAGGTTTAATGGAAG...AACAAGGTAGTTTTTGCCTACCACAGTGTCTATATCGGAGACAGTGATCTCCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| CDS-3UTR CAA 90 bp | AAGTTACTGTCTAATTTAGGGAAATGCAAACCAGCTACATCCTTAAGGGCATACTTCTGGCTCAGCTGCTaGATGGTGTCAGCAAACTCT | + |
|
Preference number: 5 (lower is better) Translates to: KLLSNLGKCKPATSLRAYFWLSC*MVSANS Trigger: AGAGTTTGCTGACACCATCAAGCAGCTGAGCCAGAA...GTATGCCCTTAAGGATGTAGCTGGTTTGCATTTCCCTAAATTAGACAGTAACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| CDS-3UTR CAA 90 bp | TGGTGCATGCCTTTAATTCCAGCACTTTGGAGGCAGAAGGTGAATGAATCTTTGTATGGTCACCATGTTTaGACCAATGCTGCTTTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: WCMPLIPALWRQKVNESLYGHHV*TNAAFH Trigger: GTGAAAAGCAGCATTGGTCAAAACATGGTGACCATA...CAAAGATTCATTCACCTTCTGCCTCCAAAGTGCTGGAATTAAAGGCATGCACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120680.2 |
||
| CDS-3UTR CAA 90 bp | TGGCAAGTCCAAACCAAAAGGCATTCAAAAGCTAACACAGTAAAGGTCATGCAAGGGCTGGCAGAAACTTaGAAGTTACTAGTACCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: WQVQTKRHSKANTVKVMQGLAET*KLLVPR Trigger: CCTTGGTACTAGTAACTTCAAAGTTTCTGCCAGCCC...TTGCATGACCTTTACTGTGTTAGCTTTTGAATGCCTTTTGGTTTGGACTTGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| CDS-3UTR CAA 90 bp | TTCAACCTTGCTGGCAAGAAAACAAGTTCCATCTCTTCTGAAAGTTACTGTCTAGGAAAGGAGACTCTCTaGGAGATACATAGGGCGACA | + |
|
Preference number: 5 (lower is better) Translates to: FNLAGKKTSSISSESYCLGKETL*EIHRAT Trigger: TGTCGCCCTATGTATCTCCAAGAGAGTCTCCTTTCC...TAGACAGTAACTTTCAGAAGAGATGGAACTTGTTTTCTTGCCAGCAAGGTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| CDS-3UTR CAA 90 bp | TGGCAAGTCCAAACCAAAAGGCATTCAAAAGCTAACACAGTAAAGGTCATGCAAAAGACTTTCATCTTTTaGAGATCCAGCCTCACGAGG | + |
|
Preference number: 5 (lower is better) Translates to: WQVQTKRHSKANTVKVMQKTFIF*RSSLTR Trigger: CCTCGTGAGGCTGGATCTCAAAAAGATGAAAGTCTT...TTGCATGACCTTTACTGTGTTAGCTTTTGAATGCCTTTTGGTTTGGACTTGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| CDS-3UTR CAA 90 bp | TGGCATTCTTCCTTCCTAAAGTTGCAAGTGCTGACCATAAGTGCAAAACTTCCATCCCTGATATCTGTTTaGAACTGGTTCAGATCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: WHSSFLKLQVLTISAKLPSLISV*NWFRSF Trigger: GAAGGATCTGAACCAGTTCAAAACAGATATCAGGGA...TGGAAGTTTTGCACTTATGGTCAGCACTTGCAACTTTAGGAAGGAAGAATGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| CDS GCA 90 bp | AGTTACCATTTGACTGCACTATGGTCACCATGTTTTGACCAATGCTaGTTTTCACTTGAATCTTCACATAGTGTTCATCTCGCCAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: SYHLTALWSPCFDQC*FSLESSHSVHLARL Trigger: AAGTCTGGCGAGATGAACACTATGTGAAGATTCAAGTGAAAAGCAGCATTGGTCAAAACATGGTGACCATAGTGCAGTCAAATGGTAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023486.15 ENSMUST00000120680.2 |
||
| CDS GCA 90 bp | CTAAGTTACCATTTGACTGCACTATGGTCACCATGTTTTGACCAATaGTGCTTTTCACTTGAATCTTCACATAGTGTTCATCTCGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LSYHLTALWSPCFDQ*CFSLESSHSVHLAR Trigger: TCTGGCGAGATGAACACTATGTGAAGATTCAAGTGAAAAGCAGCATTGGTCAAAACATGGTGACCATAGTGCAGTCAAATGGTAACTTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023486.15 ENSMUST00000120680.2 |
||
| CDS-3UTR CAA 90 bp | ATGGAGATCACTGTCTCCGATATAGACACTGTGGTAGGCAAAAACTACCTTGTTCTAGCCTTCATGTTATaGTCGGCATTTTCTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: MEITVSDIDTVVGKNYLVLAFML*SAFSSS Trigger: TGAAGAAGAAAATGCCGACAATAACATGAAGGCTAG...AACAAGGTAGTTTTTGCCTACCACAGTGTCTATATCGGAGACAGTGATCTCCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| CDS-3UTR CAA 90 bp | AGCTACACAAGAGAAAAACGATCTGTGATAGGTAGCCTCACAACAATATCAAGACTTCCATTAAACCTCTaGGGTTTTCTGACACTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SYTREKRSVIGSLTTISRLPLNL*GFLTLA Trigger: GGCTAGTGTCAGAAAACCCAAGAGGTTTAATGGAAG...TCTTGATATTGTTGTGAGGCTACCTATCACAGATCGTTTTTCTCTTGTGTAGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120680.2 |
||
| CDS-3UTR CAA 90 bp | TGCATGCCTTCATTCAAGACTTGGAATCCCATTATGCACGGTGATACTCATACTTCATCTCGCCAGACTTaGCTGAATTTAAATTCATGG | + |
|
Preference number: 5 (lower is better) Translates to: CMPSFKTWNPIMHGDTHTSSRQT*LNLNSW Trigger: CCATGAATTTAAATTCAGCAAAGTCTGGCGAGATGA...AGTATGAGTATCACCGTGCATAATGGGATTCCAAGTCTTGAATGAAGGCATGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| CDS-3UTR CAA 90 bp | TGGTGCATGCCTTTAATTCCAGCACTTTGGAGGCAGAAGGTGAATGAATCTTTGAATTGCATTAAAGCTTaGGGCATTTGCAACCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: WCMPLIPALWRQKVNESLNCIKA*GICNLF Trigger: GAAAAGGTTGCAAATGCCCAAAGCTTTAATGCAATT...CAAAGATTCATTCACCTTCTGCCTCCAAAGTGCTGGAATTAAAGGCATGCACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120680.2 |
||
| CDS-3UTR CAA 90 bp | TGGCATTCTTCCTTCCTAAAGTTGCAAGTGCTGACCATAAGTGCAAAACTTCCAACGGGGAATTTATTCTaGTCCATGTATATGAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: WHSSFLKLQVLTISAKLPTGNLF*SMYMRT Trigger: TGTCCTCATATACATGGACAAGAATAAATTCCCCGT...TGGAAGTTTTGCACTTATGGTCAGCACTTGCAACTTTAGGAAGGAAGAATGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| CDS-3UTR CAA 90 bp | AGCTACACAAGAGAAAAACGATCTGTGATAGGTAGCCTCACAACAATATCAAGATTTCTGCAGCAGCTCTaGAGATTGTTTGCACAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SYTREKRSVIGSLTTISRFLQQL*RLFAQV Trigger: TACCTGTGCAAACAATCTCAAGAGCTGCTGCAGAAA...TCTTGATATTGTTGTGAGGCTACCTATCACAGATCGTTTTTCTCTTGTGTAGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120680.2 |
||
| CDS-3UTR CAA 90 bp | CATTTCAGCAAAGACAGTATAGGTTGGCAAGTCCAAACCAAAAGGCATTCAAAATATGGTCACCATGTTTaGACCAATGCTGCTTTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: HFSKDSIGWQVQTKRHSKYGHHV*TNAAFH Trigger: GTGAAAAGCAGCATTGGTCAAAACATGGTGACCATA...TTTTGAATGCCTTTTGGTTTGGACTTGCCAACCTATACTGTCTTTGCTGAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| CDS CCA 90 bp | AGCCACTGTAGACTTAGACCCATATCCCTGATATCTGTTTTGAACTaGTTCAGATCCTTCATAAATGACAGTAGTTTGCTGTTATACATC | + |
|
Preference number: 5 (lower is better) Translates to: SHCRLRPISLISVLN*FRSFINDSSLLLYI Trigger: GATGTATAACAGCAAACTACTGTCATTTATGAAGGATCTGAACCAGTTCAAAACAGATATCAGGGATATGGGTCTAAGTCTACAGTGGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| CDS-3UTR CAA 90 bp | CTACAAAGCTACACAAGAGAAAAACGATCTGTGATAGGTAGCCTCACAACAATACTAGCCTTCATGTTATaGTCGGCATTTTCTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LQSYTREKRSVIGSLTTILAFML*SAFSSS Trigger: TGAAGAAGAAAATGCCGACAATAACATGAAGGCTAG...TATTGTTGTGAGGCTACCTATCACAGATCGTTTTTCTCTTGTGTAGCTTTGTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120680.2 |
||
| CDS-3UTR CAA 90 bp | AGCTACACAAGAGAAAAACGATCTGTGATAGGTAGCCTCACAACAATATCAAGATCATCTCGCCAGACTTaGCTGAATTTAAATTCATGG | + |
|
Preference number: 5 (lower is better) Translates to: SYTREKRSVIGSLTTISRSSRQT*LNLNSW Trigger: CCATGAATTTAAATTCAGCAAAGTCTGGCGAGATGA...TCTTGATATTGTTGTGAGGCTACCTATCACAGATCGTTTTTCTCTTGTGTAGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120680.2 |
||
| CDS-3UTR CAA 90 bp | AGCTACACAAGAGAAAAACGATCTGTGATAGGTAGCCTCACAACAATATCAAGAACGGGGAATTTATTCTaGTCCATGTATATGAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: SYTREKRSVIGSLTTISRTGNLF*SMYMRT Trigger: TGTCCTCATATACATGGACAAGAATAAATTCCCCGT...TCTTGATATTGTTGTGAGGCTACCTATCACAGATCGTTTTTCTCTTGTGTAGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120680.2 |
||
| CDS-3UTR CAA 90 bp | TATTTAACCCAATCCTCTTCTAGCTCATATTATTTGGATTGTGGCATTCTTCCTTTTCTGCAGCAGCTCTaGAGATTGTTTGCACAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: YLTQSSSSSYYLDCGILPFLQQL*RLFAQV Trigger: TACCTGTGCAAACAATCTCAAGAGCTGCTGCAGAAA...AGGAAGAATGCCACAATCCAAATAATATGAGCTAGAAGAGGATTGGGTTAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| CDS-3UTR CAA 90 bp | CAAAGCTACACAAGAGAAAAACGATCTGTGATAGGTAGCCTCACAACAATATCAAATGCTGCTTTTCACTaGAATCTTCACATAGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: QSYTREKRSVIGSLTTISNAAFH*NLHIVF Trigger: GAACACTATGTGAAGATTCAAGTGAAAAGCAGCATT...TGATATTGTTGTGAGGCTACCTATCACAGATCGTTTTTCTCTTGTGTAGCTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120680.2 |
||
| CDS-3UTR CAA 90 bp | CATTTCAGCAAAGACAGTATAGGTTGGCAAGTCCAAACCAAAAGGCATTCAAAAAATTGCATTAAAGCTTaGGGCATTTGCAACCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: HFSKDSIGWQVQTKRHSKNCIKA*GICNLF Trigger: GAAAAGGTTGCAAATGCCCAAAGCTTTAATGCAATT...TTTTGAATGCCTTTTGGTTTGGACTTGCCAACCTATACTGTCTTTGCTGAAATG 38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| CDS-3UTR CAA 90 bp | AAGTTACTGTCTAATTTAGGGAAATGCAAACCAGCTACATCCTTAAGGGCATACAAAGGATATGCAGCATaGTCAAAGGAAAGTTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: KLLSNLGKCKPATSLRAYKGYAA*SKESFS Trigger: TGAGAAACTTTCCTTTGACAATGCTGCATATCCTTT...GTATGCCCTTAAGGATGTAGCTGGTTTGCATTTCCCTAAATTAGACAGTAACTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| CDS GCA 90 bp | ACAAAAAGAAACTGCTGGGATTCCAGAATATGCAAGGAAAGGATATaGAGCATTGTCAAAGGAAAGTTTCTCAACTTTGCTAATCCAATT | + |
|
Preference number: 5 (lower is better) Translates to: TKRNCWDSRICKERI*SIVKGKFLNFANPI Trigger: AATTGGATTAGCAAAGTTGAGAAACTTTCCTTTGACAATGCTGCATATCCTTTCCTTGCATATTCTGGAATCCCAGCAGTTTCTTTTTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| CDS-3UTR CAA 90 bp | CTAGTCTTTGTTAATGTGATCTTGCTCATTACCTACATAATTCATAGCCACCATAATGCTGCTTTTCACTaGAATCTTCACATAGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LVFVNVILLITYIIHSHHNAAFH*NLHIVF Trigger: GAACACTATGTGAAGATTCAAGTGAAAAGCAGCATT...ATGGTGGCTATGAATTATGTAGGTAATGAGCAAGATCACATTAACAAAGACTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| CDS CAA 72 bp | GAGCTGACCAGCCACTTCCGCTGCTGTACGAACCATTaGGTTGAGCTGAGGAACTTTCTGAGTCAATGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: ELTSHFRCCTNH*VELRNFLSQCL Trigger: GAGGCATTGACTCAGAAAGTTCCTCAGCTCAACCAAATGGTTCGTACAGCAGCGGAAGTGGCTGGTCAGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| CDS TCA 72 bp | GGAAAGCCAGGTGTGTATGGATCACCAGTTCCTAGATaGGCATGTCCAAAGAGTGCAAGGTCTGCCTCAACA | + |
|
Preference number: 6 (lower is better) Translates to: GKPGVYGSPVPR*ACPKSARSAST Trigger: TGTTGAGGCAGACCTTGCACTCTTTGGACATGCTCATCTAGGAACTGGTGATCCATACACACCTGGCTTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023486.15 ENSMUST00000120680.2 |
||
| CDS TCA 72 bp | TCCATCTACTTGCCGAGCAAGGCTAAACCGGGTGTATaGCAATGGTTCCCCACCAAACAAGTTAGAGAATGC | + |
|
Preference number: 6 (lower is better) Translates to: SIYLPSKAKPGV*QWFPTKQVREC Trigger: GCATTCTCTAACTTGTTTGGTGGGGAACCATTGTCATACACCCGGTTTAGCCTTGCTCGGCAAGTAGATGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023486.15 ENSMUST00000120680.2 |
||
| CDS CAA 72 bp | GCCTCACGAGGAGTGTATGTATTCTGGCTCAGCTGCTaGATGGTGTCAGCAAACTCTATGGAGTTCAACTTC | + |
|
Preference number: 6 (lower is better) Translates to: ASRGVYVFWLSC*MVSANSMEFNF Trigger: GAAGTTGAACTCCATAGAGTTTGCTGACACCATCAAGCAGCTGAGCCAGAATACATACACTCCTCGTGAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023486.15 ENSMUST00000120680.2 |
||
| CDS CAA 90 bp | CTTGTCTGTCTCCTCCGTTTCAGCCAGTTTCACACACTCCTCTTTTaGTTCTACACGCTTACAATAGCCCAGGTAGCCACTCATGAATCC | + |
|
Preference number: 6 (lower is better) Translates to: LVCLLRFSQFHTLLF*FYTLTIAQVATHES Trigger: GGATTCATGAGTGGCTACCTGGGCTATTGTAAGCGTGTAGAACAAAAAGAGGAGTGTGTGAAACTGGCTGAAACGGAGGAGACAGACAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023486.15 ENSMUST00000120680.2 |
||
| CDS TCA 72 bp | CCTCACGAGGAGTGTATGTATTCTGGCTCAGCTGCTTaGTGGTGTCAGCAAACTCTATGGAGTTCAACTTCT | + |
|
Preference number: 6 (lower is better) Translates to: PHEECMYSGSAA*WCQQTLWSSTS Trigger: AGAAGTTGAACTCCATAGAGTTTGCTGACACCATCAAGCAGCTGAGCCAGAATACATACACTCCTCGTGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023486.15 ENSMUST00000120680.2 |
||
| CDS GCA 72 bp | ATTGTCAATATTCCAAATGTCACCAGAGAGGGCATTTaGGACTCCCTGAATAGTCCAAGTAGCCAGGGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: IVNIPNVTREGI*DSLNSPSSQGQ Trigger: TTGGCCCTGGCTACTTGGACTATTCAGGGAGTCGCAAATGCCCTCTCTGGTGACATTTGGAATATTGACAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| CDS CAA 90 bp | AAGCGAGATGATGTAGGAACATCCTCTGTTTCCATGGTTTCTGACTaGTCTGTCTCCTCCGTTTCAGCCAGTTTCACACACTCCTCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: KRDDVGTSSVSMVSD*SVSSVSASFTHSSF Trigger: AAAAGAGGAGTGTGTGAAACTGGCTGAAACGGAGGAGACAGACAAGTCAGAAACCATGGAAACAGAGGATGTTCCTACATCATCTCGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023486.15 ENSMUST00000120680.2 |
||
| CDS GCA 72 bp | GGTAAGTTTAATAATGAGCTGACCAGCCACTTCCGCTaGTGTACGAACCATTTGGTTGAGCTGAGGAACTTT | + |
|
Preference number: 6 (lower is better) Translates to: GKFNNELTSHFR*CTNHLVELRNF Trigger: AAAGTTCCTCAGCTCAACCAAATGGTTCGTACAGCAGCGGAAGTGGCTGGTCAGCTCATTATTAAACTTACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| CDS TCA 72 bp | TTTTCTTCTTCATCTGCAGCCAGTTTCATCTCCACATaGCTGTTATCTCCATCTACTTGCCGAGCAAGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: FSSSSAASFIST*LLSPSTCRARL Trigger: TAGCCTTGCTCGGCAAGTAGATGGAGATAACAGTCATGTGGAGATGAAACTGGCTGCAGATGAAGAAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023486.15 ENSMUST00000120680.2 |
||
| CDS TCA 72 bp | TTCAATTCAACGTCATGGGTAAGTTTAATAATGAGCTaGCCAGCCACTTCCGCTGCTGTACGAACCATTTGG | + |
|
Preference number: 6 (lower is better) Translates to: FNSTSWVSLIMS*PATSAAVRTIW Trigger: CCAAATGGTTCGTACAGCAGCGGAAGTGGCTGGTCAGCTCATTATTAAACTTACCCATGACGTTGAATTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| CDS CAA 90 bp | GTGTCAGCAAACTCTATGGAGTTCAACTTCTCTGACAACAGTGTTTaGAGGTCTGCCCAATATAAGCGAGATGATGTAGGAACATCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: VSANSMEFNFSDNSV*RSAQYKRDDVGTSS Trigger: AGAGGATGTTCCTACATCATCTCGCTTATATTGGGCAGACCTCAAAACACTGTTGTCAGAGAAGTTGAACTCCATAGAGTTTGCTGACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023486.15 ENSMUST00000120680.2 |
||
| CDS CAA 90 bp | TGTCCAAAGAGTGCAAGGTCTGCCTCAACAACGGGGAATTTATTCTaGTCCATGTATATGAGGACACCAATTGCATTAAAGCTTTGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: CPKSARSASTTGNLF*SMYMRTPIALKLWA Trigger: TGCCCAAAGCTTTAATGCAATTGGTGTCCTCATATACATGGACAAGAATAAATTCCCCGTTGTTGAGGCAGACCTTGCACTCTTTGGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023486.15 ENSMUST00000120680.2 |
||
| CDS GCA 72 bp | AACCATTTGGTTGAGCTGAGGAACTTTCTGAGTCAATaGCTCATAGGTATCCAATCTAGTGCCCAAATAAGG | + |
|
Preference number: 6 (lower is better) Translates to: NHLVELRNFLSQ*LIGIQSSAQIR Trigger: CCTTATTTGGGCACTAGATTGGATACCTATGAGGCATTGACTCAGAAAGTTCCTCAGCTCAACCAAATGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
||
| CDS CCA 72 bp | ACTCCACTGGGTCTAAGTTACCATTTGACTGCACTATaGTCACCATGTTTTGACCAATGCTGCTTTTCACTT | + |
|
Preference number: 6 (lower is better) Translates to: TPLGLSYHLTAL*SPCFDQCCFSL Trigger: AAGTGAAAAGCAGCATTGGTCAAAACATGGTGACCATAGTGCAGTCAAATGGTAACTTAGACCCAGTGGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023486.15 ENSMUST00000120680.2 |
||
| CDS CAA 72 bp | AACCTCTTGGGTTTTCTGACACTAGCCTTCATGTTATaGTCGGCATTTTCTTCTTCATCTGCAGCCAGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: NLLGFLTLAFML*SAFSSSSAASF Trigger: GAAACTGGCTGCAGATGAAGAAGAAAATGCCGACAATAACATGAAGGCTAGTGTCAGAAAACCCAAGAGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023486.15 ENSMUST00000120680.2 |
||
| CDS CAA 72 bp | GCAATAGCTGCAAAGCAGAGTCTTCCATTAAACCTCTaGGGTTTTCTGACACTAGCCTTCATGTTATTGTCG | + |
|
Preference number: 6 (lower is better) Translates to: AIAAKQSLPLNL*GFLTLAFMLLS Trigger: CGACAATAACATGAAGGCTAGTGTCAGAAAACCCAAGAGGTTTAATGGAAGACTCTGCTTTGCAGCTATTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023486.15 ENSMUST00000120680.2 |
||
| CDS CAA 90 bp | CTTCCATTAAACCTCTTGGGTTTTCTGACACTAGCCTTCATGTTATaGTCGGCATTTTCTTCTTCATCTGCAGCCAGTTTCATCTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: LPLNLLGFLTLAFML*SAFSSSSAASFIST Trigger: TGTGGAGATGAAACTGGCTGCAGATGAAGAAGAAAATGCCGACAATAACATGAAGGCTAGTGTCAGAAAACCCAAGAGGTTTAATGGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023486.15 ENSMUST00000120680.2 |
||
| CDS CAA 72 bp | AACTCTATGGAGTTCAACTTCTCTGACAACAGTGTTTaGAGGTCTGCCCAATATAAGCGAGATGATGTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: NSMEFNFSDNSV*RSAQYKRDDVG Trigger: TCCTACATCATCTCGCTTATATTGGGCAGACCTCAAAACACTGTTGTCAGAGAAGTTGAACTCCATAGAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023486.15 ENSMUST00000120680.2 |
||
| CDS CAA 72 bp | AGTGCAAGGTCTGCCTCAACAACGGGGAATTTATTCTaGTCCATGTATATGAGGACACCAATTGCATTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SARSASTTGNLF*SMYMRTPIALK Trigger: CTTTAATGCAATTGGTGTCCTCATATACATGGACAAGAATAAATTCCCCGTTGTTGAGGCAGACCTTGCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023486.15 ENSMUST00000120680.2 |
||
| CDS CAA 90 bp | ATGACTAGTGCAATAGCTGCAAAGCAGAGTCTTCCATTAAACCTCTaGGGTTTTCTGACACTAGCCTTCATGTTATTGTCGGCATTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: MTSAIAAKQSLPLNL*GFLTLAFMLLSAFS Trigger: AGAAAATGCCGACAATAACATGAAGGCTAGTGTCAGAAAACCCAAGAGGTTTAATGGAAGACTCTGCTTTGCAGCTATTGCACTAGTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023486.15 ENSMUST00000120680.2 |
||
| CDS CAA 90 bp | TTCATGGAACTGATTTTCAATATAATAGGCAAGACTTTCATCTTTTaGAGATCCAGCCTCACGAGGAGTGTATGTATTCTGGCTCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: FMELIFNIIGKTFIF*RSSLTRSVCILAQL Trigger: CAGCTGAGCCAGAATACATACACTCCTCGTGAGGCTGGATCTCAAAAAGATGAAAGTCTTGCCTATTATATTGAAAATCAGTTCCATGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023486.15 ENSMUST00000120680.2 |
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| CDS CAA 90 bp | GAAACTGCTGGGATTCCAGAATATGCAAGGAAAGGATATGCAGCATaGTCAAAGGAAAGTTTCTCAACTTTGCTAATCCAATTGCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: ETAGIPEYARKGYAA*SKESFSTLLIQLLS Trigger: AGACAGCAATTGGATTAGCAAAGTTGAGAAACTTTCCTTTGACAATGCTGCATATCCTTTCCTTGCATATTCTGGAATCCCAGCAGTTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| CDS GCA 72 bp | TTGACTGCACTATGGTCACCATGTTTTGACCAATGCTaGTTTTCACTTGAATCTTCACATAGTGTTCATCTC | + |
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Preference number: 6 (lower is better) Translates to: LTALWSPCFDQC*FSLESSHSVHL Trigger: GAGATGAACACTATGTGAAGATTCAAGTGAAAAGCAGCATTGGTCAAAACATGGTGACCATAGTGCAGTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023486.15 ENSMUST00000120680.2 |
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| CDS CCA 72 bp | AGACTTAGACCCATATCCCTGATATCTGTTTTGAACTaGTTCAGATCCTTCATAAATGACAGTAGTTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: RLRPISLISVLN*FRSFINDSSLL Trigger: CAGCAAACTACTGTCATTTATGAAGGATCTGAACCAGTTCAAAACAGATATCAGGGATATGGGTCTAAGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| CDS CAA 72 bp | GGGATTCCAGAATATGCAAGGAAAGGATATGCAGCATaGTCAAAGGAAAGTTTCTCAACTTTGCTAATCCAA | + |
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Preference number: 6 (lower is better) Translates to: GIPEYARKGYAA*SKESFSTLLIQ Trigger: TTGGATTAGCAAAGTTGAGAAACTTTCCTTTGACAATGCTGCATATCCTTTCCTTGCATATTCTGGAATCCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| CDS CAA 72 bp | CACTGTAGACTTAGACCCATATCCCTGATATCTGTTTaGAACTGGTTCAGATCCTTCATAAATGACAGTAGT | + |
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Preference number: 6 (lower is better) Translates to: HCRLRPISLISV*NWFRSFINDSS Trigger: ACTACTGTCATTTATGAAGGATCTGAACCAGTTCAAAACAGATATCAGGGATATGGGTCTAAGTCTACAGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| CDS CAA 72 bp | CCCATAAGTGTATATAATAAGGGGCTGGCAGAAACTTaGAAGTTACTAGTACCAAGGACAACTTTATCCAAA | + |
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Preference number: 6 (lower is better) Translates to: PISVYNKGLAET*KLLVPRTTLSK Trigger: TTTGGATAAAGTTGTCCTTGGTACTAGTAACTTCAAAGTTTCTGCCAGCCCCTTATTATATACACTTATGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| CDS CAA 90 bp | GCAAGGAAAGGATATGCAGCATTGTCAAAGGAAAGTTTCTCAACTTaGCTAATCCAATTGCTGTCTCTATATAGAGATTTTCCATCAACT | + |
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Preference number: 6 (lower is better) Translates to: ARKGYAALSKESFST*LIQLLSLYRDFPST Trigger: AGTTGATGGAAAATCTCTATATAGAGACAGCAATTGGATTAGCAAAGTTGAGAAACTTTCCTTTGACAATGCTGCATATCCTTTCCTTGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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| CDS CAA 72 bp | GGATATGCAGCATTGTCAAAGGAAAGTTTCTCAACTTaGCTAATCCAATTGCTGTCTCTATATAGAGATTTT | + |
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Preference number: 6 (lower is better) Translates to: GYAALSKESFST*LIQLLSLYRDF Trigger: AAAATCTCTATATAGAGACAGCAATTGGATTAGCAAAGTTGAGAAACTTTCCTTTGACAATGCTGCATATCC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023486.15 |
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