Pregenerated sensors for TFPT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006335Ensembl transcript IDs: ENSMUST00000058880.9, ENSMUST00000108641.10, ENSMUST00000153143.2, ENSMUST00000155592.8, ENSMUST00000205596.2, ENSMUST00000206370.2
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGCGCCGACCTAGTGCCTGGTACTTTCTACGATTTAGTTCCCGCTaGCGACGCCTTCGACCCCGGGCTGCCTCTTCCTCTTCATCTCGC | + |
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Preference number: 1 (lower is better) Translates to: QRRPSAWYFLRFSSR*RRLRPRAASSSSSR Trigger: GCGAGATGAAGAGGAAGAGGCAGCCCGGGGTCGAAGGCGTCGCCAGCGGGAACTAAATCGTAGAAAGTACCAGGCACTAGGTCGGCGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153143.2 |
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| 3UTR CCA 90 bp | CGCTCATTCACCTGCTCGATCTCCCGGCAGCGCCGACCTAGTGCCTaGTACTTTCTACGATTTAGTTCCCGCTGGCGACGCCTTCGACCC | + |
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Preference number: 1 (lower is better) Translates to: RSFTCSISRQRRPSA*YFLRFSSRWRRLRP Trigger: GGGTCGAAGGCGTCGCCAGCGGGAACTAAATCGTAGAAAGTACCAGGCACTAGGTCGGCGCTGCCGGGAGATCGAGCAGGTGAATGAGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153143.2 |
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| 3UTR GCA 90 bp | AAGGCCTCATCTGCTTCAAAGCCAAAGTCTTCCTCAACCTTAATCTaGACTGGGGCCAGTTCTGGAGTCAATGAAGCCCCCACCCGTGGC | + |
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Preference number: 1 (lower is better) Translates to: KASSASKPKSSSTLI*TGASSGVNEAPTRG Trigger: GCCACGGGTGGGGGCTTCATTGACTCCAGAACTGGCCCCAGTGCAGATTAAGGTTGAGGAAGACTTTGGCTTTGAAGCAGATGAGGCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058880.9 |
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| 3UTR-3UTR CCA 90 bp | TTAATCTGCACTGGGGCCAGTTCTGGAGTCAATGAAGCCCCCACCCGTGGCGCCGCCTCTTCCGCCCACTaGGCCCCTCGCCAGGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: LICTGASSGVNEAPTRGAASSAH*APRQGL Trigger: CAGCCCCTGGCGAGGGGCCCAGTGGGCGGAAGAGGC...GGCGCCACGGGTGGGGGCTTCATTGACTCCAGAACTGGCCCCAGTGCAGATTAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000058880.9 |
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| 3UTR-3UTR TCA 90 bp | ACCTGCGCTCCTGCTGGAGTCTCCGAGTTATCCTTTGCACCTGATGGAGCCTGTCCTCCAACACAATGGTaGACTGGCTATCTCGGTAGT | + |
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Preference number: 2 (lower is better) Translates to: TCAPAGVSELSFAPDGACPPTQW*TGYLGS Trigger: ACTACCGAGATAGCCAGTTCACCATTGTGTTGGAGG...ACAGGCTCCATCAGGTGCAAAGGATAACTCGGAGACTCCAGCAGGAGCGCAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206370.2 |
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| 3UTR TCA 72 bp | AACCTTAATCTGCACTGGGGCCAGTTCTGGAGTCAATaGAGCCCCCACCCGTGGCGCCCGCCGCCTCTTCCG | + |
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Preference number: 3 (lower is better) Translates to: NLNLHWGQFWSQ*SPHPWRPPPLP Trigger: CGGAAGAGGCGGCGGGCGCCACGGGTGGGGGCTTCATTGACTCCAGAACTGGCCCCAGTGCAGATTAAGGTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058880.9 |
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| 3UTR CCA 72 bp | ACCTGCTCGATCTCCCGGCAGCGCCGACCTAGTGCCTaGTACTTTCTACGATTTAGTTCCCGCTGGCGACGC | + |
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Preference number: 3 (lower is better) Translates to: TCSISRQRRPSA*YFLRFSSRWRR Trigger: GCGTCGCCAGCGGGAACTAAATCGTAGAAAGTACCAGGCACTAGGTCGGCGCTGCCGGGAGATCGAGCAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153143.2 |
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| 3UTR TCA 72 bp | CTCGGTAGTCATCCCCGTAGGAGTCCAGCACCCTCATaGGGAACCTGCGCTCCTGCTGGAGTCTCCGAGTTA | + |
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Preference number: 3 (lower is better) Translates to: LGSHPRRSPAPS*GTCAPAGVSEL Trigger: TAACTCGGAGACTCCAGCAGGAGCGCAGGTTCCTCATGAGGGTGCTGGACTCCTACGGGGATGACTACCGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206370.2 |
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| 3UTR CCA 72 bp | CCTAGTGCCTGGTACTTTCTACGATTTAGTTCCCGCTaGCGACGCCTTCGACCCCGGGCTGCCTCTTCCTCT | + |
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Preference number: 3 (lower is better) Translates to: PSAWYFLRFSSR*RRLRPRAASSS Trigger: AGAGGAAGAGGCAGCCCGGGGTCGAAGGCGTCGCCAGCGGGAACTAAATCGTAGAAAGTACCAGGCACTAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153143.2 |
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| 3UTR TCA 72 bp | GGCTGCCTCTTCCTCTTCATCTCGCTCCCGGAGTCCTaGATCACCCAGACCACCGGACACAAATTCCACTTC | + |
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Preference number: 3 (lower is better) Translates to: GCLFLFISLPES*ITQTTGHKFHF Trigger: GAAGTGGAATTTGTGTCCGGTGGTCTGGGTGATTCAGGACTCCGGGAGCGAGATGAAGAGGAAGAGGCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153143.2 |
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| 3UTR TCA 72 bp | CGCTCCTGCTGGAGTCTCCGAGTTATCCTTTGCACCTaGTGGAGCCTGTTCAAGACTCGCTCATTCACCTGC | + |
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Preference number: 3 (lower is better) Translates to: RSCWSLRVILCT*WSLFKTRSFTC Trigger: GCAGGTGAATGAGCGAGTCTTGAACAGGCTCCATCAGGTGCAAAGGATAACTCGGAGACTCCAGCAGGAGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153143.2 |
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| 3UTR GCA 72 bp | TCTGCTTCAAAGCCAAAGTCTTCCTCAACCTTAATCTaGACTGGGGCCAGTTCTGGAGTCAATGAAGCCCCC | + |
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Preference number: 3 (lower is better) Translates to: SASKPKSSSTLI*TGASSGVNEAP Trigger: GGGGGCTTCATTGACTCCAGAACTGGCCCCAGTGCAGATTAAGGTTGAGGAAGACTTTGGCTTTGAAGCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058880.9 |
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| CDS-3UTR GCA 90 bp | CGCTGGCGACGCCTTCGACCCCGGGCTGCCTCTTCCTCTTCATCTCGCTCCCGGTTCAAAGCCCACGGCTaGCATGGTCCTGTAGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: RWRRLRPRAASSSSSRSRFKAHG*HGPVGP Trigger: TGGCCCTACAGGACCATGGCAGCCGTGGGCTTTGAA...CCGGGAGCGAGATGAAGAGGAAGAGGCAGCCCGGGGTCGAAGGCGTCGCCAGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153143.2 |
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| CDS-3UTR GCA 90 bp | ATCTGCACTGGGGCCAGTTCTGGAGTCAATGAAGCCCCCACCCGTGGCGCCCGCACTCGCTCATTCACCTaGTCGATCTCCCGGCAGCGC | + |
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Preference number: 4 (lower is better) Translates to: ICTGASSGVNEAPTRGARTRSFT*SISRQR Trigger: GCGCTGCCGGGAGATCGAGCAGGTGAATGAGCGAGT...GCGGGCGCCACGGGTGGGGGCTTCATTGACTCCAGAACTGGCCCCAGTGCAGAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058880.9 |
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| CDS-3UTR TCA 90 bp | ACTGGGGCCAGTTCTGGAGTCAATGAAGCCCCCACCCGTGGCGCCCGCCGCCTCCCTCCAACACAATGGTaGACTGGCTATCTCGGTAGT | + |
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Preference number: 4 (lower is better) Translates to: TGASSGVNEAPTRGARRLPPTQW*TGYLGS Trigger: ACTACCGAGATAGCCAGTTCACCATTGTGTTGGAGG...GAGGCGGCGGGCGCCACGGGTGGGGGCTTCATTGACTCCAGAACTGGCCCCAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058880.9 |
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| CDS-3UTR CCA 90 bp | GCCTTCGACCCCGGGCTGCCTCTTCCTCTTCATCTCGCTCCCGGAGTCCTGAATAGCCCACGGCTGCCATaGTCCTGTAGGGCCAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: AFDPGLPLPLHLAPGVLNSPRLP*SCRAKK Trigger: CTTCTTGGCCCTACAGGACCATGGCAGCCGTGGGCT...ATTCAGGACTCCGGGAGCGAGATGAAGAGGAAGAGGCAGCCCGGGGTCGAAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153143.2 |
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| CDS-3UTR TCA 90 bp | GCCAGTTCTGGAGTCAATGAAGCCCCCACCCGTGGCGCCCGCCGCCTCTTCCGCGTTATCCTTTGCACCTaGTGGAGCCTGTTCAAGACT | + |
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Preference number: 4 (lower is better) Translates to: ASSGVNEAPTRGARRLFRVILCT*WSLFKT Trigger: AGTCTTGAACAGGCTCCATCAGGTGCAAAGGATAAC...GCGGAAGAGGCGGCGGGCGCCACGGGTGGGGGCTTCATTGACTCCAGAACTGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058880.9 |
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| CDS-3UTR CCA 90 bp | ATCTGCACTGGGGCCAGTTCTGGAGTCAATGAAGCCCCCACCCGTGGCGCCCGCTCACTTTCTAGGATGTaGCCACCAAACAGGGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: ICTGASSGVNEAPTRGARSLSRM*PPNRGG Trigger: GCCTCCCCTGTTTGGTGGCCACATCCTAGAAAGTGA...GCGGGCGCCACGGGTGGGGGCTTCATTGACTCCAGAACTGGCCCCAGTGCAGAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058880.9 |
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| CDS-3UTR CCA 90 bp | GTAGGAGTCCAGCACCCTCATGAGGAACCTGCGCTCCTGCTGGAGTCTCCGAGTAGCCCACGGCTGCCATaGTCCCCTCTCTCTGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: VGVQHPHEEPALLLESPSSPRLP*SPLSVP Trigger: TGGAACAGAGAGAGGGGACCATGGCAGCCGTGGGCT...ACTCGGAGACTCCAGCAGGAGCGCAGGTTCCTCATGAGGGTGCTGGACTCCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206370.2 |
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| CDS-3UTR GCA 90 bp | GAACCTGCGCTCCTGCTGGAGTCTCCGAGTTATCCTTTGCACCTGATGGAGCCTCCTTCGACCCCGGGCTaGCTCTTCCTCTTCATCTCG | + |
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Preference number: 4 (lower is better) Translates to: EPALLLESPSYPLHLMEPPSTPG*LFLFIS Trigger: CGAGATGAAGAGGAAGAGGCAGCCCGGGGTCGAAGG...AGGCTCCATCAGGTGCAAAGGATAACTCGGAGACTCCAGCAGGAGCGCAGGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206370.2 |
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| CDS-3UTR CCA 90 bp | TCTGCACTGGGGCCAGTTCTGGAGTCAATGAAGCCCCCACCCGTGGCGCCCGCCAAGCCCCTCTTTCTCTaGAGGTTCATTCTCAGCATT | + |
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Preference number: 4 (lower is better) Translates to: SALGPVLESMKPPPVAPAKPLFL*RFILSI Trigger: AATGCTGAGAATGAACCTCCAGAGAAAGAGGGGCTT...GGCGGGCGCCACGGGTGGGGGCTTCATTGACTCCAGAACTGGCCCCAGTGCAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058880.9 |
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| CDS-3UTR GCA 90 bp | ACCTGCGCTCCTGCTGGAGTCTCCGAGTTATCCTTTGCACCTGATGGAGCCTGTTTCAAAGCCCACGGCTaGCATGGTCCCCTCTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: TCAPAGVSELSFAPDGACFKAHG*HGPLSL Trigger: CAGAGAGAGGGGACCATGGCAGCCGTGGGCTTTGAA...ACAGGCTCCATCAGGTGCAAAGGATAACTCGGAGACTCCAGCAGGAGCGCAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206370.2 |
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| CDS-3UTR CCA 90 bp | GAACCTGCGCTCCTGCTGGAGTCTCCGAGTTATCCTTTGCACCTGATGGAGCCTTCACTTTCTAGGATGTaGCCACCAAACAGGGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: EPALLLESPSYPLHLMEPSLSRM*PPNRGG Trigger: GCCTCCCCTGTTTGGTGGCCACATCCTAGAAAGTGA...AGGCTCCATCAGGTGCAAAGGATAACTCGGAGACTCCAGCAGGAGCGCAGGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206370.2 |
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| CDS-3UTR CCA 90 bp | TCAACCTTAATCTGCACTGGGGCCAGTTCTGGAGTCAATGAAGCCCCCACCCGTAACCTGCGCTCCTGCTaGAGTCTCCGAGTTATCCTT | + |
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Preference number: 4 (lower is better) Translates to: STLICTGASSGVNEAPTRNLRSC*SLRVIL Trigger: AAGGATAACTCGGAGACTCCAGCAGGAGCGCAGGTT...ACGGGTGGGGGCTTCATTGACTCCAGAACTGGCCCCAGTGCAGATTAAGGTTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058880.9 |
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| 3UTR CAA 72 bp | GTACCTGCGCTCCTGCTGGAGTCTCCGAGTTATCCTTaGCACCTGATGGAGCCTGTTCAAGACTCGCTCATT | + |
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Preference number: 4 (lower is better) Translates to: VPALLLESPSYP*HLMEPVQDSLI Trigger: AATGAGCGAGTCTTGAACAGGCTCCATCAGGTGCAAAGGATAACTCGGAGACTCCAGCAGGAGCGCAGGTAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153143.2 |
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| CDS-3UTR GCA 90 bp | AAAGCCAAAGTCTTCCTCAACCTTAATCTGCACTGGGGCCAGTTCTGGAGTCAACCTTCGACCCCGGGCTaGCTCTTCCTCTTCATCTCG | + |
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Preference number: 4 (lower is better) Translates to: KAKVFLNLNLHWGQFWSQPSTPG*LFLFIS Trigger: CGAGATGAAGAGGAAGAGGCAGCCCGGGGTCGAAGG...TTGACTCCAGAACTGGCCCCAGTGCAGATTAAGGTTGAGGAAGACTTTGGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058880.9 |
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| CDS-3UTR CCA 90 bp | CTGGCTATCTCGGTAGTCATCCCCGTAGGAGTCCAGCACCCTCATGAGGAACCTCGCCGACCTAGTGCCTaGTACTTTCTACGATTTAGT | + |
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Preference number: 4 (lower is better) Translates to: LAISVVIPVGVQHPHEEPRRPSA*YFLRFS Trigger: ACTAAATCGTAGAAAGTACCAGGCACTAGGTCGGCG...AGGTTCCTCATGAGGGTGCTGGACTCCTACGGGGATGACTACCGAGATAGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206370.2 |
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| 3UTR CAA 72 bp | AGGGTAGCAATTTGTCTGGCTCTCGGGAAACCCAACTaGAATCCAAGGCCTCATCTGCTTCAAAGCCAAAGT | + |
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Preference number: 4 (lower is better) Translates to: RVAICLALGKPN*NPRPHLLQSQS Trigger: ACTTTGGCTTTGAAGCAGATGAGGCCTTGGATTCAAGTTGGGTTTCCCGAGAGCCAGACAAATTGCTACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058880.9 |
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| CDS-3UTR CCA 90 bp | AAAGCCAAAGTCTTCCTCAACCTTAATCTGCACTGGGGCCAGTTCTGGAGTCAACGCCGACCTAGTGCCTaGTACTTTCTACGATTTAGT | + |
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Preference number: 4 (lower is better) Translates to: KAKVFLNLNLHWGQFWSQRRPSA*YFLRFS Trigger: ACTAAATCGTAGAAAGTACCAGGCACTAGGTCGGCG...TTGACTCCAGAACTGGCCCCAGTGCAGATTAAGGTTGAGGAAGACTTTGGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058880.9 |
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| CDS-3UTR GCA 90 bp | AAAGCCAAAGTCTTCCTCAACCTTAATCTGCACTGGGGCCAGTTCTGGAGTCAAGTTCATTCTCAGCATTaGCTCCAACACAATGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: KAKVFLNLNLHWGQFWSQVHSQH*LQHNGE Trigger: TTCACCATTGTGTTGGAGGCAATGCTGAGAATGAAC...TTGACTCCAGAACTGGCCCCAGTGCAGATTAAGGTTGAGGAAGACTTTGGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058880.9 |
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| CDS-3UTR CAA 90 bp | ACTGGGGCCAGTTCTGGAGTCAATGAAGCCCCCACCCGTGGCGCCCGCCGCCTCGGTTGCAGTTGTCCTTaGGGATGGGGAAAGCCCCTC | + |
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Preference number: 5 (lower is better) Translates to: TGASSGVNEAPTRGARRLGCSCP*GWGKPL Trigger: GAGGGGCTTTCCCCATCCCAAAGGACAACTGCAACC...GAGGCGGCGGGCGCCACGGGTGGGGGCTTCATTGACTCCAGAACTGGCCCCAGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000058880.9 |
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| CDS-3UTR CAA 90 bp | ACTGGGGCCAGTTCTGGAGTCAATGAAGCCCCCACCCGTGGCGCCCGCCGCCTCTCTCCGAGTTATCCTTaGCACCTGATGGAGCCTGTT | + |
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Preference number: 5 (lower is better) Translates to: TGASSGVNEAPTRGARRLSPSYP*HLMEPV Trigger: AACAGGCTCCATCAGGTGCAAAGGATAACTCGGAGA...GAGGCGGCGGGCGCCACGGGTGGGGGCTTCATTGACTCCAGAACTGGCCCCAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058880.9 |
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| CDS CCA 90 bp | CATTCACCTACCTGCTCGATCTCCCGGCAGCGCCGACCTAGTGCCTaGTACTTTCTACGATTTAGTTCCCGCTGGCGACGCCTTCGACCC | + |
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Preference number: 5 (lower is better) Translates to: HSPTCSISRQRRPSA*YFLRFSSRWRRLRP Trigger: GGGTCGAAGGCGTCGCCAGCGGGAACTAAATCGTAGAAAGTACCAGGCACTAGGTCGGCGCTGCCGGGAGATCGAGCAGGTAGGTGAATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206370.2 |
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| CDS TCA 90 bp | AGGAACCTGCGCTCCTGCTGGAGTCTCCGAGTTATCCTTTGCACCTaGTGGAGCCTGTTCAAGACTCGCTCATTCACCTGCTCGATCTCC | + |
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Preference number: 5 (lower is better) Translates to: RNLRSCWSLRVILCT*WSLFKTRSFTCSIS Trigger: GGAGATCGAGCAGGTGAATGAGCGAGTCTTGAACAGGCTCCATCAGGTGCAAAGGATAACTCGGAGACTCCAGCAGGAGCGCAGGTTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058880.9 ENSMUST00000108641.10 ENSMUST00000155592.8 |
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| CDS TCA 72 bp | GGCTCCCACCTGCACTGGGGCCAGTTCTGGAGTCAATaGAGCCCCCACCCGTGGCGCCCGCCGCCTCTTCCG | + |
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Preference number: 6 (lower is better) Translates to: GSHLHWGQFWSQ*SPHPWRPPPLP Trigger: CGGAAGAGGCGGCGGGCGCCACGGGTGGGGGCTTCATTGACTCCAGAACTGGCCCCAGTGCAGGTGGGAGCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108641.10 |
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| CDS CAA 90 bp | CCTCATGAGGAACCTGCGCTCCTGCTGGAGTCTCCGAGTTATCCTTaGCACCTGATGGAGCCTGTTCAAGACTCGCTCATTCACCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: PHEEPALLLESPSYP*HLMEPVQDSLIHLL Trigger: GAGCAGGTGAATGAGCGAGTCTTGAACAGGCTCCATCAGGTGCAAAGGATAACTCGGAGACTCCAGCAGGAGCGCAGGTTCCTCATGAGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058880.9 ENSMUST00000108641.10 ENSMUST00000155592.8 |
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| CDS CAA 72 bp | GAACCTGCGCTCCTGCTGGAGTCTCCGAGTTATCCTTaGCACCTGATGGAGCCTGTTCAAGACTCGCTCATT | + |
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Preference number: 6 (lower is better) Translates to: EPALLLESPSYP*HLMEPVQDSLI Trigger: AATGAGCGAGTCTTGAACAGGCTCCATCAGGTGCAAAGGATAACTCGGAGACTCCAGCAGGAGCGCAGGTTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058880.9 ENSMUST00000108641.10 ENSMUST00000155592.8 |
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| CDS CAA 72 bp | ATTCTCAGCATTGCCTGGGGTAGGGACATCTGTGCCTaGGCTGCCATCATCCTCCAACACAATGGTGAACTG | + |
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Preference number: 6 (lower is better) Translates to: ILSIAWGRDICA*AAIILQHNGEL Trigger: CAGTTCACCATTGTGTTGGAGGATGATGGCAGCCAAGGCACAGATGTCCCTACCCCAGGCAATGCTGAGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108641.10 ENSMUST00000155592.8 ENSMUST00000205596.2 |
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