RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TFPI2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000029664

Ensembl transcript IDs: ENSMUST00000031674.11, ENSMUST00000203257.2

Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAATTCAAGGACACTTGGCAAGGAATAAGTAATACCTCAGTGGAATaGTTGAATAAAGTGTTCATGAATCGGTTACTGGTCTCCTGGAGC +
Preference number: 1 (lower is better)
Translates to: EFKDTWQGISNTSVE*LNKVFMNRLLVSWS
Trigger: GCTCCAGGAGACCAGTAACCGATTCATGAACACTTTATTCAATCATTCCACTGAGGTATTACTTATTCCTTGCCAAGTGTCCTTGAATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031674.11
3UTR CCA 90 bp AGTAACTGTTGTCTTCTGAAATTAGTACTAGCTATCCCAAGAAGTTaGGCAAGTCATGTTCACATTCATATCGGATACATCACAAGGATT +
Preference number: 1 (lower is better)
Translates to: SNCCLLKLVLAIPRS*ASHVHIHIGYITRI
Trigger: AATCCTTGTGATGTATCCGATATGAATGTGAACATGACTTGCCCAACTTCTTGGGATAGCTAGTACTAATTTCAGAAGACAACAGTTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031674.11
3UTR TCA 72 bp GACACTTGGCAAGGAATAAGTAATACCTCAGTGGAATaGTTGAATAAAGTGTTCATGAATCGGTTACTGGTC +
Preference number: 3 (lower is better)
Translates to: DTWQGISNTSVE*LNKVFMNRLLV
Trigger: GACCAGTAACCGATTCATGAACACTTTATTCAATCATTCCACTGAGGTATTACTTATTCCTTGCCAAGTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031674.11
3UTR-3UTR CAA 90 bp ACAAAAGATCCAGAAATTTCTATTCTCCCAAACATTTTGTCTGAGGGAATACTGCAGTCTCTTAGACATTaGAACAGTACATCGAAAATG +
Preference number: 3 (lower is better)
Translates to: TKDPEISILPNILSEGILQSLRH*NSTSKM
Trigger: CATTTTCGATGTACTGTTCAAATGTCTAAGAGACTG...CAGTATTCCCTCAGACAAAATGTTTGGGAGAATAGAAATTTCTGGATCTTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000031674.11
3UTR TCA 72 bp AGATCCAGAAATTTCTATTCTCCCAAACATTTTGTCTaGGGGAATACTGTAGCACATATGGTCAAAGAAGAT +
Preference number: 3 (lower is better)
Translates to: RSRNFYSPKHFV*GNTVAHMVKED
Trigger: ATCTTCTTTGACCATATGTGCTACAGTATTCCCTCAGACAAAATGTTTGGGAGAATAGAAATTTCTGGATCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031674.11
CDS-3UTR TCA 90 bp CTGTTGTCTTCTGAAATTAGTACTAGCTATCCCAAGAAGTTGGGCAAGTCATGTGGGCAGACACTGAAGTaGGACCAAGAACGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: LLSSEISTSYPKKLGKSCGQTLK*DQERSP
Trigger: TGGGCTCCGTTCTTGGTCTCACTTCAGTGTCTGCCC...ACATGACTTGCCCAACTTCTTGGGATAGCTAGTACTAATTTCAGAAGACAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031674.11
CDS-3UTR CCA 90 bp CATATCGGATACATCACAAGGATTCAGTCTCTTAGACATTTGAACAGTACATCGCTTCCGCAAGTCTGTTaGCAGAGGTCCCGACTGTGG +
Preference number: 4 (lower is better)
Translates to: HIGYITRIQSLRHLNSTSLPQVC*QRSRLW
Trigger: CCACAGTCGGGACCTCTGCCAACAGACTTGCGGAAG...CGATGTACTGTTCAAATGTCTAAGAGACTGAATCCTTGTGATGTATCCGATATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031674.11
CDS-3UTR CCA 90 bp CATATCGGATACATCACAAGGATTCAGTCTCTTAGACATTTGAACAGTACATCGCAGAGGTCCCGACTGTaGAAATTGTTGGCATTGCCC +
Preference number: 4 (lower is better)
Translates to: HIGYITRIQSLRHLNSTSQRSRL*KLLALP
Trigger: GGGCAATGCCAACAATTTCCACAGTCGGGACCTCTG...CGATGTACTGTTCAAATGTCTAAGAGACTGAATCCTTGTGATGTATCCGATATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031674.11
CDS-3UTR TCA 90 bp ACAAAAGATCCAGAAATTTCTATTCTCCCAAACATTTTGTCTGAGGGAATACTGAGTAGAACTTGGGGATaGGGGCCTGACAAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: TKDPEISILPNILSEGILSRTWG*GPDKVL
Trigger: CAGGACCTTGTCAGGCCCTCATCCCCAAGTTCTACT...CAGTATTCCCTCAGACAAAATGTTTGGGAGAATAGAAATTTCTGGATCTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000031674.11
CDS-3UTR TCA 90 bp CTGTTGTCTTCTGAAATTAGTACTAGCTATCCCAAGAAGTTGGGCAAGTCATGTCACAGCCAGTATAGGTaGAAGTCTCACATGTTTTGT +
Preference number: 4 (lower is better)
Translates to: LLSSEISTSYPKKLGKSCHSQYR*KSHMFC
Trigger: ACAAAACATGTGAGACTTTCACCTATACTGGCTGTG...ACATGACTTGCCCAACTTCTTGGGATAGCTAGTACTAATTTCAGAAGACAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031674.11
CDS-3UTR CCA 90 bp ACAAAAGATCCAGAAATTTCTATTCTCCCAAACATTTTGTCTGAGGGAATACTGGACTGTGGAAATTGTTaGCATTGCCCAAGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: TKDPEISILPNILSEGILDCGNC*HCPSSL
Trigger: GAGGCTGCTTGGGCAATGCCAACAATTTCCACAGTC...CAGTATTCCCTCAGACAAAATGTTTGGGAGAATAGAAATTTCTGGATCTTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031674.11
CDS-3UTR CCA 90 bp CATATCGGATACATCACAAGGATTCAGTCTCTTAGACATTTGAACAGTACATCGGATGCTTCCAAAATCTaGGCAGGAAGTCACCTATCT +
Preference number: 4 (lower is better)
Translates to: HIGYITRIQSLRHLNSTSDASKI*AGSHLS
Trigger: AGATAGGTGACTTCCTGCCCAGATTTTGGAAGCATC...CGATGTACTGTTCAAATGTCTAAGAGACTGAATCCTTGTGATGTATCCGATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031674.11
CDS-3UTR GCA 90 bp ACAAAAGATCCAGAAATTTCTATTCTCCCAAACATTTTGTCTGAGGGAATACTGGGAAATTGTTGGCATTaGCCAAGCAGCCTCCATAGT +
Preference number: 4 (lower is better)
Translates to: TKDPEISILPNILSEGILGNCWH*PSSLHS
Trigger: ACTATGGAGGCTGCTTGGGCAATGCCAACAATTTCC...CAGTATTCCCTCAGACAAAATGTTTGGGAGAATAGAAATTTCTGGATCTTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031674.11
CDS-3UTR CCA 90 bp CATATCGGATACATCACAAGGATTCAGTCTCTTAGACATTTGAACAGTACATCGAAAAGCGTGTCACATTaGCAGAACACAGACCTTCAT +
Preference number: 4 (lower is better)
Translates to: HIGYITRIQSLRHLNSTSKSVSH*QNTDLH
Trigger: ATGAAGGTCTGTGTTCTGCCAATGTGACACGCTTTT...CGATGTACTGTTCAAATGTCTAAGAGACTGAATCCTTGTGATGTATCCGATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031674.11
CDS-3UTR TCA 90 bp ACAAAAGATCCAGAAATTTCTATTCTCCCAAACATTTTGTCTGAGGGAATACTGTGGACTGGAGCAAAATaGTGGAATATGTTTCCGTGG +
Preference number: 4 (lower is better)
Translates to: TKDPEISILPNILSEGILWTGAK*WNMFPW
Trigger: CCACGGAAACATATTCCATCATTTTGCTCCAGTCCA...CAGTATTCCCTCAGACAAAATGTTTGGGAGAATAGAAATTTCTGGATCTTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000031674.11
CDS-3UTR CCA 90 bp CTGTTGTCTTCTGAAATTAGTACTAGCTATCCCAAGAAGTTGGGCAAGTCATGTCTTCATCCTTTGGACTaGAGCAAAATGATGGAATAT +
Preference number: 4 (lower is better)
Translates to: LLSSEISTSYPKKLGKSCLHPLD*SKMMEY
Trigger: ATATTCCATCATTTTGCTCCAGTCCAAAGGATGAAG...ACATGACTTGCCCAACTTCTTGGGATAGCTAGTACTAATTTCAGAAGACAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031674.11
CDS-3UTR TCA 90 bp CATATCGGATACATCACAAGGATTCAGTCTCTTAGACATTTGAACAGTACATCGTCATGGTATTCAGGTTaGAGAAAAACCGTATATTGG +
Preference number: 4 (lower is better)
Translates to: HIGYITRIQSLRHLNSTSSWYSG*RKTVYW
Trigger: CCAATATACGGTTTTTCTTCAACCTGAATACCATGA...CGATGTACTGTTCAAATGTCTAAGAGACTGAATCCTTGTGATGTATCCGATATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031674.11
CDS TCA 90 bp GCAAGAGGCAGATCTCTAAATTATTCCCTTGGGCAGACACTGAAGTaGGACCAAGAACGGAGCCCACCAGGAGCAGCGGCAAATTCCACA +
Preference number: 5 (lower is better)
Translates to: ARGRSLNYSLGQTLK*DQERSPPGAAANST
Trigger: TGTGGAATTTGCCGCTGCTCCTGGTGGGCTCCGTTCTTGGTCTCACTTCAGTGTCTGCCCAAGGGAATAATTTAGAGATCTGCCTCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031674.11
CDS CCA 90 bp GATCGACAAACTGGAGGAACTTTCTCGATACTTCCGCAAGTCTGTTaGCAGAGGTCCCGACTGTGGAAATTGTTGGCATTGCCCAAGCAG +
Preference number: 5 (lower is better)
Translates to: DRQTGGTFSILPQVC*QRSRLWKLLALPKQ
Trigger: CTGCTTGGGCAATGCCAACAATTTCCACAGTCGGGACCTCTGCCAACAGACTTGCGGAAGTATCGAGAAAGTTCCTCCAGTTTGTCGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031674.11
CDS TCA 90 bp CCCGACTGTGGAAATTGTTGGCATTGCCCAAGCAGCCTCCATAGTTaGATCTGCGGCACTTTTGCTGGTCTCTGTCATAGTAGAACTTGG +
Preference number: 5 (lower is better)
Translates to: PDCGNCWHCPSSLHS*ICGTFAGLCHSRTW
Trigger: CCAAGTTCTACTATGACAGAGACCAGCAAAAGTGCCGCAGATTCAACTATGGAGGCTGCTTGGGCAATGCCAACAATTTCCACAGTCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031674.11
CDS TCA 90 bp CACATTGGCAGAACACAGACCTTCATCCTTTGGACTGGAGCAAAATaGTGGAATATGTTTCCGTGGTTCACACAAGCCCTTACATGTAGC +
Preference number: 5 (lower is better)
Translates to: HIGRTQTFILWTGAK*WNMFPWFTQALTCS
Trigger: GCTACATGTAAGGGCTTGTGTGAACCACGGAAACATATTCCATCATTTTGCTCCAGTCCAAAGGATGAAGGTCTGTGTTCTGCCAATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031674.11
ENSMUST00000203257.2
CDS CCA 90 bp AAAAGCGTGTCACATTGGCAGAACACAGACCTTCATCCTTTGGACTaGAGCAAAATGATGGAATATGTTTCCGTGGTTCACACAAGCCCT +
Preference number: 5 (lower is better)
Translates to: KSVSHWQNTDLHPLD*SKMMEYVSVVHTSP
Trigger: AGGGCTTGTGTGAACCACGGAAACATATTCCATCATTTTGCTCCAGTCCAAAGGATGAAGGTCTGTGTTCTGCCAATGTGACACGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031674.11
ENSMUST00000203257.2
CDS-3UTR CAA 90 bp ACAAAAGATCCAGAAATTTCTATTCTCCCAAACATTTTGTCTGAGGGAATACTGCGGCAAATTCCACAGTaGCAGGGGCATAGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: TKDPEISILPNILSEGILRQIPQ*QGHSRV
Trigger: GACCCTGCTATGCCCCTGCAACTGTGGAATTTGCCG...CAGTATTCCCTCAGACAAAATGTTTGGGAGAATAGAAATTTCTGGATCTTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000031674.11
CDS-3UTR CAA 90 bp ACAAAAGATCCAGAAATTTCTATTCTCCCAAACATTTTGTCTGAGGGAATACTGCGACTGTGGAAATTGTaGGCATTGCCCAAGCAGCCT +
Preference number: 5 (lower is better)
Translates to: TKDPEISILPNILSEGILRLWKL*ALPKQP
Trigger: AGGCTGCTTGGGCAATGCCAACAATTTCCACAGTCG...CAGTATTCCCTCAGACAAAATGTTTGGGAGAATAGAAATTTCTGGATCTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031674.11
CDS-3UTR CAA 90 bp ACAAAAGATCCAGAAATTTCTATTCTCCCAAACATTTTGTCTGAGGGAATACTGTCCCGACTGTGGAAATaGTTGGCATTGCCCAAGCAG +
Preference number: 5 (lower is better)
Translates to: TKDPEISILPNILSEGILSRLWK*LALPKQ
Trigger: CTGCTTGGGCAATGCCAACAATTTCCACAGTCGGGA...CAGTATTCCCTCAGACAAAATGTTTGGGAGAATAGAAATTTCTGGATCTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031674.11
CDS-3UTR CAA 90 bp ACAAAAGATCCAGAAATTTCTATTCTCCCAAACATTTTGTCTGAGGGAATACTGCCTATCTTCCATCTCTaGGGCTTCTTCCAGCCTTTA +
Preference number: 5 (lower is better)
Translates to: TKDPEISILPNILSEGILPIFHL*GFFQPL
Trigger: TAAAGGCTGGAAGAAGCCCAAGAGATGGAAGATAGG...CAGTATTCCCTCAGACAAAATGTTTGGGAGAATAGAAATTTCTGGATCTTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031674.11
CDS-3UTR CAA 90 bp CATATCGGATACATCACAAGGATTCAGTCTCTTAGACATTTGAACAGTACATCGGTCATGGTATTCAGGTaGAAGAAAAACCGTATATTG +
Preference number: 5 (lower is better)
Translates to: HIGYITRIQSLRHLNSTSVMVFR*KKNRIL
Trigger: CAATATACGGTTTTTCTTCAACCTGAATACCATGAC...CGATGTACTGTTCAAATGTCTAAGAGACTGAATCCTTGTGATGTATCCGATATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031674.11
CDS CAA 90 bp GTTGGCATTGCCCAAGCAGCCTCCATAGTTGAATCTGCGGCACTTTaGCTGGTCTCTGTCATAGTAGAACTTGGGGATGAGGGCCTGACA +
Preference number: 6 (lower is better)
Translates to: VGIAQAASIVESAAL*LVSVIVELGDEGLT
Trigger: TGTCAGGCCCTCATCCCCAAGTTCTACTATGACAGAGACCAGCAAAAGTGCCGCAGATTCAACTATGGAGGCTGCTTGGGCAATGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031674.11
CDS CAA 90 bp AGATGCTTCCAAAATCTGGGCAGGAAGTCACCTATCTTCCATCTCTaGGGCTTCTTCCAGCCTTTAACGCAGGCACGGTGGCAAGCATCC +
Preference number: 6 (lower is better)
Translates to: RCFQNLGRKSPIFHL*GFFQPLTQARWQAS
Trigger: GGATGCTTGCCACCGTGCCTGCGTTAAAGGCTGGAAGAAGCCCAAGAGATGGAAGATAGGTGACTTCCTGCCCAGATTTTGGAAGCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031674.11
ENSMUST00000203257.2
CDS CCA 72 bp TCCAAGGGCAAGAGGCAGATCTCTAAATTATTCCCTTaGGCAGACACTGAAGTGAGACCAAGAACGGAGCCC +
Preference number: 6 (lower is better)
Translates to: SKGKRQISKLFP*ADTEVRPRTEP
Trigger: GGGCTCCGTTCTTGGTCTCACTTCAGTGTCTGCCCAAGGGAATAATTTAGAGATCTGCCTCTTGCCCTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031674.11
CDS CAA 72 bp GCCCAAGCAGCCTCCATAGTTGAATCTGCGGCACTTTaGCTGGTCTCTGTCATAGTAGAACTTGGGGATGAG +
Preference number: 6 (lower is better)
Translates to: AQAASIVESAAL*LVSVIVELGDE
Trigger: CTCATCCCCAAGTTCTACTATGACAGAGACCAGCAAAAGTGCCGCAGATTCAACTATGGAGGCTGCTTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031674.11
CDS CCA 72 bp ACTGGAGGAACTTTCTCGATACTTCCGCAAGTCTGTTaGCAGAGGTCCCGACTGTGGAAATTGTTGGCATTG +
Preference number: 6 (lower is better)
Translates to: TGGTFSILPQVC*QRSRLWKLLAL
Trigger: CAATGCCAACAATTTCCACAGTCGGGACCTCTGCCAACAGACTTGCGGAAGTATCGAGAAAGTTCCTCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031674.11
CDS CAA 72 bp CCAGGCCTAAGGGGCTCACATGTCATGGTATTCAGGTaGAAGAAAAACCGTATATTGGGCTTATCACATGGA +
Preference number: 6 (lower is better)
Translates to: PGLRGSHVMVFR*KKNRILGLSHG
Trigger: TCCATGTGATAAGCCCAATATACGGTTTTTCTTCAACCTGAATACCATGACATGTGAGCCCCTTAGGCCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000031674.11
CDS CCA 72 bp TCACATTGGCAGAACACAGACCTTCATCCTTTGGACTaGAGCAAAATGATGGAATATGTTTCCGTGGTTCAC +
Preference number: 6 (lower is better)
Translates to: SHWQNTDLHPLD*SKMMEYVSVVH
Trigger: GTGAACCACGGAAACATATTCCATCATTTTGCTCCAGTCCAAAGGATGAAGGTCTGTGTTCTGCCAATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031674.11
ENSMUST00000203257.2
CDS CAA 72 bp CATGTCATGGTATTCAGGTTGAAGAAAAACCGTATATaGGGCTTATCACATGGATATGTTTTTAGCTCTGAT +
Preference number: 6 (lower is better)
Translates to: HVMVFRLKKNRI*GLSHGYVFSSD
Trigger: ATCAGAGCTAAAAACATATCCATGTGATAAGCCCAATATACGGTTTTTCTTCAACCTGAATACCATGACATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000031674.11