Pregenerated sensors for TFIP11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029345Ensembl transcript IDs: ENSMUST00000031288.14, ENSMUST00000129528.2, ENSMUST00000198238.5
Found 202 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACTGGTTCCCACTATTGAAGCTGGAAGGACTGCCTGGGGACCTGTaGGCATCCCAGGAAGAGCCTGACTACCAGGACTGTGAGGACCTG | + |
|
Preference number: 1 (lower is better) Translates to: HWFPLLKLEGLPGDL*ASQEEPDYQDCEDL Trigger: CAGGTCCTCACAGTCCTGGTAGTCAGGCTCTTCCTGGGATGCCCACAGGTCCCCAGGCAGTCCTTCCAGCTTCAATAGTGGGAACCAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| 3UTR CCA 90 bp | CAGACTCCCCAGTACACTGACACCTTTAATGATACATCTGTCCACTaGTTCCCACTATTGAAGCTGGAAGGACTGCCTGGGGACCTGTGG | + |
|
Preference number: 1 (lower is better) Translates to: QTPQYTDTFNDTSVH*FPLLKLEGLPGDLW Trigger: CCACAGGTCCCCAGGCAGTCCTTCCAGCTTCAATAGTGGGAACCAGTGGACAGATGTATCATTAAAGGTGTCAGTGTACTGGGGAGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| 3UTR CAA 90 bp | TCTCCACCTGGGCCAGGAGCCACGGTGCACACCACACCAGATCCTTaGCCCGGCCAGGAATACAGGCCGACTGGGGACACTGAGTCACAT | + |
|
Preference number: 2 (lower is better) Translates to: SPPGPGATVHTTPDP*PGQEYRPTGDTESH Trigger: ATGTGACTCAGTGTCCCCAGTCGGCCTGTATTCCTGGCCGGGCAAAGGATCTGGTGTGGTGTGCACCGTGGCTCCTGGCCCAGGTGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| 3UTR-3UTR CCA 90 bp | GACTGCCTGGGGACCTGTGGGCATCCCAGGAAGAGCCTGACTACCAGGACTGTGAGTCACATCCTGCCCTaGTGGCCTGGTCTCCCAAAT | + |
|
Preference number: 2 (lower is better) Translates to: DCLGTCGHPRKSLTTRTVSHILP*WPGLPN Trigger: ATTTGGGAGACCAGGCCACCAGGGCAGGATGTGACT...CACAGTCCTGGTAGTCAGGCTCTTCCTGGGATGCCCACAGGTCCCCAGGCAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| 3UTR-3UTR CCA 90 bp | GATCGCTCAGCTGGAGTAACAGGACAGTTCTCTCCACCTGGGCCAGGAGCCACGCACATCCTGCCCTGGTaGCCTGGTCTCCCAAATAGA | + |
|
Preference number: 2 (lower is better) Translates to: DRSAGVTGQFSPPGPGATHILPW*PGLPNR Trigger: TCTATTTGGGAGACCAGGCCACCAGGGCAGGATGTG...CGTGGCTCCTGGCCCAGGTGGAGAGAACTGTCCTGTTACTCCAGCTGAGCGATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| 3UTR-3UTR GCA 90 bp | GATCGCTCAGCTGGAGTAACAGGACAGTTCTCTCCACCTGGGCCAGGAGCCACGCAGCTTGGTTTACAGTaGTGTTTATTCACACCGGTC | + |
|
Preference number: 2 (lower is better) Translates to: DRSAGVTGQFSPPGPGATQLGLQ*CLFTPV Trigger: GACCGGTGTGAATAAACAGCACTGTAAACCAAGCTG...CGTGGCTCCTGGCCCAGGTGGAGAGAACTGTCCTGTTACTCCAGCTGAGCGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| 3UTR-3UTR CCA 90 bp | CAGACTCCCCAGTACACTGACACCTTTAATGATACATCTGTCCACTGGTTCCCACTGCCTGGGGACCTGTaGGCATCCCAGGAAGAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: QTPQYTDTFNDTSVHWFPLPGDL*ASQEEP Trigger: AGGCTCTTCCTGGGATGCCCACAGGTCCCCAGGCAG...TGGGAACCAGTGGACAGATGTATCATTAAAGGTGTCAGTGTACTGGGGAGTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| 3UTR CAA 90 bp | TACACTGACACCTTTAATGATACATCTGTCCACTGGTTCCCACTATaGAAGCTGGAAGGACTGCCTGGGGACCTGTGGGCATCCCAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: YTDTFNDTSVHWFPL*KLEGLPGDLWASQE Trigger: TTCCTGGGATGCCCACAGGTCCCCAGGCAGTCCTTCCAGCTTCAATAGTGGGAACCAGTGGACAGATGTATCATTAAAGGTGTCAGTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| 3UTR TCA 72 bp | TTTGCCCGGCCAGGAATACAGGCCGACTGGGGACACTaGGTCACATCCTGCCCTGGTGGCCTGGTCTCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: FARPGIQADWGH*VTSCPGGLVSQ Trigger: TTGGGAGACCAGGCCACCAGGGCAGGATGTGACTCAGTGTCCCCAGTCGGCCTGTATTCCTGGCCGGGCAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| 3UTR CCA 72 bp | TCGCTCAGCTGGAGTAACAGGACAGTTCTCTCCACCTaGGCCAGGAGCCACGGTGCACACCACACCAGATCC | + |
|
Preference number: 3 (lower is better) Translates to: SLSWSNRTVLST*ARSHGAHHTRS Trigger: GGATCTGGTGTGGTGTGCACCGTGGCTCCTGGCCCAGGTGGAGAGAACTGTCCTGTTACTCCAGCTGAGCGA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| 3UTR CCA 72 bp | GCACAACCAGCTGGTGCCTCTCCTACTGTGTGCCAGTaGCCTTCATCCTTAGGGCGAGCCCAGCAGTCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: AQPAGASPTVCQ*PSSLGRAQQSH Trigger: GTGAGACTGCTGGGCTCGCCCTAAGGATGAAGGCCACTGGCACACAGTAGGAGAGGCACCAGCTGGTTGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| 3UTR-3UTR CAA 90 bp | GATCGCTCAGCTGGAGTAACAGGACAGTTCTCTCCACCTGGGCCAGGAGCCACGACCACACCAGATCCTTaGCCCGGCCAGGAATACAGG | + |
|
Preference number: 3 (lower is better) Translates to: DRSAGVTGQFSPPGPGATTTPDP*PGQEYR Trigger: CCTGTATTCCTGGCCGGGCAAAGGATCTGGTGTGGT...CGTGGCTCCTGGCCCAGGTGGAGAGAACTGTCCTGTTACTCCAGCTGAGCGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| 3UTR CCA 72 bp | GGCCGACTGGGGACACTGAGTCACATCCTGCCCTGGTaGCCTGGTCTCCCAAATAGAGACGTTATTCATCAG | + |
|
Preference number: 3 (lower is better) Translates to: GRLGTLSHILPW*PGLPNRDVIHQ Trigger: CTGATGAATAACGTCTCTATTTGGGAGACCAGGCCACCAGGGCAGGATGTGACTCAGTGTCCCCAGTCGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| 3UTR CCA 72 bp | ACAGGCCGACTGGGGACACTGAGTCACATCCTGCCCTaGTGGCCTGGTCTCCCAAATAGAGACGTTATTCAT | + |
|
Preference number: 3 (lower is better) Translates to: TGRLGTLSHILP*WPGLPNRDVIH Trigger: ATGAATAACGTCTCTATTTGGGAGACCAGGCCACCAGGGCAGGATGTGACTCAGTGTCCCCAGTCGGCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| 3UTR GCA 72 bp | GCCACACTGTCCATGTTTCTAAGCACAACCAGCTGGTaGCTCTCCTACTGTGTGCCAGTGGCCTTCATCCTT | + |
|
Preference number: 3 (lower is better) Translates to: ATLSMFLSTTSW*LSYCVPVAFIL Trigger: AAGGATGAAGGCCACTGGCACACAGTAGGAGAGGCACCAGCTGGTTGTGCTTAGAAACATGGACAGTGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| 3UTR TCA 72 bp | ATTGCAAAGGTGTCTGACAGAATAGCTGGGCCGGGGTaGGGGTGCAAAGCCACACTGTCCATGTTTCTAAGC | + |
|
Preference number: 3 (lower is better) Translates to: IAKVSDRIAGPG*GCKATLSMFLS Trigger: GCTTAGAAACATGGACAGTGTGGCTTTGCACCCTCACCCCGGCCCAGCTATTCTGTCAGACACCTTTGCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| 3UTR CCA 72 bp | AAAGCCACACTGTCCATGTTTCTAAGCACAACCAGCTaGTGCCTCTCCTACTGTGTGCCAGTGGCCTTCATC | + |
|
Preference number: 3 (lower is better) Translates to: KATLSMFLSTTS*CLSYCVPVAFI Trigger: GATGAAGGCCACTGGCACACAGTAGGAGAGGCACCAGCTGGTTGTGCTTAGAAACATGGACAGTGTGGCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| 3UTR-3UTR CAA 90 bp | GTGCACACCACACCAGATCCTTTGCCCGGCCAGGAATACAGGCCGACTGGGGACACGTTATTCATCAGCTaGGTTTACAGTGCTGTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: VHTTPDPLPGQEYRPTGDTLFIS*VYSAVY Trigger: ATAAACAGCACTGTAAACCAAGCTGATGAATAACGT...GTCCCCAGTCGGCCTGTATTCCTGGCCGGGCAAAGGATCTGGTGTGGTGTGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| 3UTR CCA 72 bp | CAGTACACTGACACCTTTAATGATACATCTGTCCACTaGTTCCCACTATTGAAGCTGGAAGGACTGCCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: QYTDTFNDTSVH*FPLLKLEGLPG Trigger: CCCAGGCAGTCCTTCCAGCTTCAATAGTGGGAACCAGTGGACAGATGTATCATTAAAGGTGTCAGTGTACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| 3UTR GCA 72 bp | CCAAATAGAGACGTTATTCATCAGCTTGGTTTACAGTaGTGTTTATTCACACCGGTCTGGTGTGGCCGATGT | + |
|
Preference number: 3 (lower is better) Translates to: PNRDVIHQLGLQ*CLFTPVWCGRC Trigger: ACATCGGCCACACCAGACCGGTGTGAATAAACAGCACTGTAAACCAAGCTGATGAATAACGTCTCTATTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR CCA 90 bp | GACTGCCTGGGGACCTGTGGGCATCCCAGGAAGAGCCTGACTACCAGGACTGTGCTTCCTTGCCGGCTGTaGGGGGCAGCTGCGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DCLGTCGHPRKSLTTRTVLPCRL*GAAAPA Trigger: TGCTGGCGCAGCTGCCCCCCACAGCCGGCAAGGAAG...CACAGTCCTGGTAGTCAGGCTCTTCCTGGGATGCCCACAGGTCCCCAGGCAGTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR CCA 90 bp | GGGCCAGGAGCCACGGTGCACACCACACCAGATCCTTTGCCCGGCCAGGAATACGGCTCTGCAGGGAGGTaGGCACCCACGTCTTCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: GPGATVHTTPDPLPGQEYGSAGR*APTSSR Trigger: GCGAGAAGACGTGGGTGCCCACCTCCCTGCAGAGCC...GTATTCCTGGCCGGGCAAAGGATCTGGTGTGGTGTGCACCGTGGCTCCTGGCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR TCA 90 bp | AGCTGGAAGGACTGCCTGGGGACCTGTGGGCATCCCAGGAAGAGCCTGACTACCGCCGGTCGCTCTGGATaGTCTCCTGCTCCGTGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SWKDCLGTCGHPRKSLTTAGRSG*SPAPCA Trigger: AGCGCACGGAGCAGGAGATCATCCAGAGCGACCGGC...GGTAGTCAGGCTCTTCCTGGGATGCCCACAGGTCCCCAGGCAGTCCTTCCAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR CCA 90 bp | GACTGCCTGGGGACCTGTGGGCATCCCAGGAAGAGCCTGACTACCAGGACTGTGTCATGGGCACGGAGCTaGCGGCCACACCGATGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: DCLGTCGHPRKSLTTRTVSWARS*RPHRCL Trigger: GAGGCATCGGTGTGGCCGCCAGCTCCGTGCCCATGA...CACAGTCCTGGTAGTCAGGCTCTTCCTGGGATGCCCACAGGTCCCCAGGCAGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR TCA 90 bp | GATCGCTCAGCTGGAGTAACAGGACAGTTCTCTCCACCTGGGCCAGGAGCCACGTCCAGGGCTGCAGGATaGGCTTGGCTGAGGCGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: DRSAGVTGQFSPPGPGATSRAAG*AWLRRR Trigger: GCGACGCCTCAGCCAAGCTCATCCTGCAGCCCTGGA...CGTGGCTCCTGGCCCAGGTGGAGAGAACTGTCCTGTTACTCCAGCTGAGCGATC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR TCA 90 bp | GTGCACACCACACCAGATCCTTTGCCCGGCCAGGAATACAGGCCGACTGGGGACGCTCCGTGCGCTCAATaGGCAGCTGCAGGTTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VHTTPDPLPGQEYRPTGDAPCAQ*AAAGCA Trigger: AGCACAACCTGCAGCTGCTCATTGAGCGCACGGAGC...GTCCCCAGTCGGCCTGTATTCCTGGCCGGGCAAAGGATCTGGTGTGGTGTGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR TCA 90 bp | AGCTGGAAGGACTGCCTGGGGACCTGTGGGCATCCCAGGAAGAGCCTGACTACCAGGTCCTGGCTGCTGTaGGACAGCAGCTGGTCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SWKDCLGTCGHPRKSLTTRSWLL*DSSWSF Trigger: GAACGACCAGCTGCTGTCTCACAGCAGCCAGGACCT...GGTAGTCAGGCTCTTCCTGGGATGCCCACAGGTCCCCAGGCAGTCCTTCCAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR TCA 90 bp | AGCTGGAAGGACTGCCTGGGGACCTGTGGGCATCCCAGGAAGAGCCTGACTACCGCTGCCGGTTGGGGTTaGACTCATTCTGGAGATCCC | + |
|
Preference number: 4 (lower is better) Translates to: SWKDCLGTCGHPRKSLTTAAGWG*THSGDP Trigger: GGGATCTCCAGAATGAGTTCAACCCCAACCGGCAGC...GGTAGTCAGGCTCTTCCTGGGATGCCCACAGGTCCCCAGGCAGTCCTTCCAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR TCA 90 bp | GATCGCTCAGCTGGAGTAACAGGACAGTTCTCTCCACCTGGGCCAGGAGCCACGGCTCGTGTGACAGGCTaGCCACCATGTCCCGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DRSAGVTGQFSPPGPGATARVTG*PPCPAH Trigger: ATGAGCGGGACATGGTGGTCAGCCTGTCACACGAGC...CGTGGCTCCTGGCCCAGGTGGAGAGAACTGTCCTGTTACTCCAGCTGAGCGATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR TCA 90 bp | GATCGCTCAGCTGGAGTAACAGGACAGTTCTCTCCACCTGGGCCAGGAGCCACGTCCAGACCTCCCACATaGGCCTGTGGAAGGCATCGG | + |
|
Preference number: 4 (lower is better) Translates to: DRSAGVTGQFSPPGPGATSRPPT*ACGRHR Trigger: CCGATGCCTTCCACAGGCTCATGTGGGAGGTCTGGA...CGTGGCTCCTGGCCCAGGTGGAGAGAACTGTCCTGTTACTCCAGCTGAGCGATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR GCA 90 bp | GTGCACACCACACCAGATCCTTTGCCCGGCCAGGAATACAGGCCGACTGGGGACCGCTGGACAACTTGCTaGGCACAGGGGAGTAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VHTTPDPLPGQEYRPTGDRWTTC*AQGSRV Trigger: CACTCTACTCCCCTGTGCGCAGCAAGTTGTCCAGCG...GTCCCCAGTCGGCCTGTATTCCTGGCCGGGCAAAGGATCTGGTGTGGTGTGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR GCA 90 bp | GATCGCTCAGCTGGAGTAACAGGACAGTTCTCTCCACCTGGGCCAGGAGCCACGCACGTCTTCTCGCCCTaGACAAACACCACACCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: DRSAGVTGQFSPPGPGATHVFSP*TNTTPR Trigger: CCGGGGTGTGGTGTTTGTGCAGGGCGAGAAGACGTG...CGTGGCTCCTGGCCCAGGTGGAGAGAACTGTCCTGTTACTCCAGCTGAGCGATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR CCA 90 bp | GATCGCTCAGCTGGAGTAACAGGACAGTTCTCTCCACCTGGGCCAGGAGCCACGATGTCCCGCTCATACTaGAGCTGCCGGTCGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DRSAGVTGQFSPPGPGATMSRSY*SCRSLW Trigger: CCAGAGCGACCGGCAGCTCCAGTATGAGCGGGACAT...CGTGGCTCCTGGCCCAGGTGGAGAGAACTGTCCTGTTACTCCAGCTGAGCGATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR CCA 90 bp | GACTGCCTGGGGACCTGTGGGCATCCCAGGAAGAGCCTGACTACCAGGACTGTGGCGTCCATGTGCTGCTaGTGGGGGTTGATGACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: DCLGTCGHPRKSLTTRTVASMCC*WGLMTS Trigger: GCTTGTCATCAACCCCCACCAGCAGCACATGGACGC...CACAGTCCTGGTAGTCAGGCTCTTCCTGGGATGCCCACAGGTCCCCAGGCAGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR CCA 90 bp | AGATCGCTCAGCTGGAGTAACAGGACAGTTCTCTCCACCTGGGCCAGGAGCCACGCAGCCCCACCAGGCTaGAGACGGAGATCATCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RSLSWSNRTVLSTWARSHAAPPG*RRRSSP Trigger: AGGGGATGATCTCCGTCTCCAGCCTGGTGGGGCTGC...GTGGCTCCTGGCCCAGGTGGAGAGAACTGTCCTGTTACTCCAGCTGAGCGATCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR GCA 90 bp | GATCGCTCAGCTGGAGTAACAGGACAGTTCTCTCCACCTGGGCCAGGAGCCACGGTCTGCCAATGGCGCTaGCGGTTGGGGTTGAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: DRSAGVTGQFSPPGPGATVCQWR*RLGLNS Trigger: TGAGTTCAACCCCAACCGGCAGCGCCATTGGCAGAC...CGTGGCTCCTGGCCCAGGTGGAGAGAACTGTCCTGTTACTCCAGCTGAGCGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR GCA 90 bp | AGATCGCTCAGCTGGAGTAACAGGACAGTTCTCTCCACCTGGGCCAGGAGCCACGCCTCCTCTTTGGTCTaGCAATGGCGCTGCCGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RSLSWSNRTVLSTWARSHASSLV*QWRCRL Trigger: CAACCGGCAGCGCCATTGGCAGACCAAAGAGGAGGC...GTGGCTCCTGGCCCAGGTGGAGAGAACTGTCCTGTTACTCCAGCTGAGCGATCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR GCA 90 bp | GACTGCCTGGGGACCTGTGGGCATCCCAGGAAGAGCCTGACTACCAGGACTGTGCGCTCAATGAGCAGCTaGAGGTTGTGCTCCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: DCLGTCGHPRKSLTTRTVRSMSS*RLCSSS Trigger: TGAGCTGGAGCACAACCTGCAGCTGCTCATTGAGCG...CACAGTCCTGGTAGTCAGGCTCTTCCTGGGATGCCCACAGGTCCCCAGGCAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR GCA 90 bp | AGCTGGAAGGACTGCCTGGGGACCTGTGGGCATCCCAGGAAGAGCCTGACTACCCACGGGGATGATGTGTaGCCAGCTGTCCAGGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: SWKDCLGTCGHPRKSLTTHGDDV*PAVQEI Trigger: GATTTCCTGGACAGCTGGGCACACATCATCCCCGTG...GGTAGTCAGGCTCTTCCTGGGATGCCCACAGGTCCCCAGGCAGTCCTTCCAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR GCA 90 bp | GACTGCCTGGGGACCTGTGGGCATCCCAGGAAGAGCCTGACTACCAGGACTGTGGTGCCATTTCTGCAGTaGGCTGGACAACTTGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: DCLGTCGHPRKSLTTRTVVPFLQ*AGQLAA Trigger: CGCAGCAAGTTGTCCAGCGCACTGCAGAAATGGCAC...CACAGTCCTGGTAGTCAGGCTCTTCCTGGGATGCCCACAGGTCCCCAGGCAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR GCA 90 bp | GCTACAGATCGCTCAGCTGGAGTAACAGGACAGTTCTCTCCACCTGGGCCAGGAGAGGCGTCGCTGGGGTaGCATTTCTGCAGTGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ATDRSAGVTGQFSPPGPGEASLG*HFCSAL Trigger: CAGCGCACTGCAGAAATGGCACCCCAGCGACGCCTC...TCCTGGCCCAGGTGGAGAGAACTGTCCTGTTACTCCAGCTGAGCGATCTGTAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR GCA 90 bp | GACTGCCTGGGGACCTGTGGGCATCCCAGGAAGAGCCTGACTACCAGGACTGTGCACTTGGGGAAGAAATaGTTCTCCAGCAGCCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: DCLGTCGHPRKSLTTRTVHLGKK*FSSSPT Trigger: GGTGGGGCTGCTGGAGAAGCATTTCTTCCCCAAGTG...CACAGTCCTGGTAGTCAGGCTCTTCCTGGGATGCCCACAGGTCCCCAGGCAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR TCA 90 bp | AGATCGCTCAGCTGGAGTAACAGGACAGTTCTCTCCACCTGGGCCAGGAGCCACCTTCTCCAGCTCGTGTaGCAGGCTGACCACCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: RSLSWSNRTVLSTWARSHLLQLV*QADHHV Trigger: GACATGGTGGTCAGCCTGTCACACGAGCTGGAGAAG...GTGGCTCCTGGCCCAGGTGGAGAGAACTGTCCTGTTACTCCAGCTGAGCGATCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR GCA 90 bp | GCTACAGATCGCTCAGCTGGAGTAACAGGACAGTTCTCTCCACCTGGGCCAGGAAGGTGTAGAGCTGCTTaGCCTCGTGCCGCTTGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: ATDRSAGVTGQFSPPGPGRCRAA*PRAACR Trigger: TCGGCAAGCGGCACGAGGGCAAGCAGCTCTACACCT...TCCTGGCCCAGGTGGAGAGAACTGTCCTGTTACTCCAGCTGAGCGATCTGTAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR CCA 90 bp | GCTACAGATCGCTCAGCTGGAGTAACAGGACAGTTCTCTCCACCTGGGCCAGGATTCCGTGGCTGCCACTaGGCGACGACATTCCGAACG | + |
|
Preference number: 4 (lower is better) Translates to: ATDRSAGVTGQFSPPGPGFRGCH*ATTFRT Trigger: CGTTCGGAATGTCGTCGCCCAGTGGCAGCCACGGAA...TCCTGGCCCAGGTGGAGAGAACTGTCCTGTTACTCCAGCTGAGCGATCTGTAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR CCA 90 bp | TGCACACCACACCAGATCCTTTGCCCGGCCAGGAATACAGGCCGACTGGGGACAGGGTGGGCCAGCACCTaGTCTGAGAACATAGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: CTPHQILCPARNTGRLGTGWAST*SENIDF Trigger: GAAGTCTATGTTCTCAGACCAGGTGCTGGCCCACCC...TGTCCCCAGTCGGCCTGTATTCCTGGCCGGGCAAAGGATCTGGTGTGGTGTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR TCA 90 bp | TGCACACCACACCAGATCCTTTGCCCGGCCAGGAATACAGGCCGACTGGGGACAGGAGATCCCAGTCGGTaGTCTCAAAGTTCTCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CTPHQILCPARNTGRLGTGDPSR*SQSSPS Trigger: AGAGGGAGAACTTTGAGATCACCGACTGGGATCTCC...TGTCCCCAGTCGGCCTGTATTCCTGGCCGGGCAAAGGATCTGGTGTGGTGTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR GCA 90 bp | GCTACAGATCGCTCAGCTGGAGTAACAGGACAGTTCTCTCCACCTGGGCCAGGAAGTCTCGGGCCCTTTTaGCTCCAAAGCTGGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ATDRSAGVTGQFSPPGPGSLGPF*LQSWAS Trigger: AGAGGCCCAGCTTTGGAGGCAAAAGGGCCCGAGACT...TCCTGGCCCAGGTGGAGAGAACTGTCCTGTTACTCCAGCTGAGCGATCTGTAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR GCA 90 bp | GACTGCCTGGGGACCTGTGGGCATCCCAGGAAGAGCCTGACTACCAGGACTGTGTTGTCCACCTCCTTCTaGAGCTTAGGGAAGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: DCLGTCGHPRKSLTTRTVLSTSF*SLGKMS Trigger: GCTCATCTTCCCTAAGCTGCAGAAGGAGGTGGACAA...CACAGTCCTGGTAGTCAGGCTCTTCCTGGGATGCCCACAGGTCCCCAGGCAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR GCA 90 bp | GCTACAGATCGCTCAGCTGGAGTAACAGGACAGTTCTCTCCACCTGGGCCAGGAACCGATGCCTCTCTGTaGCATGTTCTCAGCCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: ATDRSAGVTGQFSPPGPGTDASL*HVLSLP Trigger: CGGGAGGCTGAGAACATGGCACAGAGAGGCATCGGT...TCCTGGCCCAGGTGGAGAGAACTGTCCTGTTACTCCAGCTGAGCGATCTGTAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR CCA 90 bp | AGATCGCTCAGCTGGAGTAACAGGACAGTTCTCTCCACCTGGGCCAGGAGCCACTCGTCATCATCAAGGTaGCCTTCGCCATCCCGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RSLSWSNRTVLSTWARSHSSSSR*PSPSRY Trigger: GTACCGGGATGGCGAAGGCCACCTTGATGATGACGA...GTGGCTCCTGGCCCAGGTGGAGAGAACTGTCCTGTTACTCCAGCTGAGCGATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR CCA 90 bp | AGGAAGAGCCTGACTACCAGGACTGTGAGGACCTGGAGATCATCAGGAAAGCTACGGCTCACAGTTCCGTaGCTGCCACTGGGCGACGAC | + |
|
Preference number: 4 (lower is better) Translates to: RKSLTTRTVRTWRSSGKLRLTVP*LPLGDD Trigger: GTCGTCGCCCAGTGGCAGCCACGGAACTGTGAGCCG...TAGCTTTCCTGATGATCTCCAGGTCCTCACAGTCCTGGTAGTCAGGCTCTTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR CCA 90 bp | ACCAGGACTGTGAGGACCTGGAGATCATCAGGAAAGCTACAGATCGCTCAGCTGAGCGGCAGCCACGGGTaGATCCACGAGTGGATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TRTVRTWRSSGKLQIAQLSGSHG*IHEWMG Trigger: TCCCATCCACTCGTGGATCCACCCGTGGCTGCCGCT...CAGCTGAGCGATCTGTAGCTTTCCTGATGATCTCCAGGTCCTCACAGTCCTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR TCA 90 bp | CTGGTTCCCACTATTGAAGCTGGAAGGACTGCCTGGGGACCTGTGGGCATCCCAAATTGGGACTGTTACTaGGCCAGGAGCACAGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: LVPTIEAGRTAWGPVGIPNWDCY*ARSTAP Trigger: AGGTGCTGTGCTCCTGGCTCAGTAACAGTCCCAATT...TGGGATGCCCACAGGTCCCCAGGCAGTCCTTCCAGCTTCAATAGTGGGAACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR GCA 90 bp | GCTACAGATCGCTCAGCTGGAGTAACAGGACAGTTCTCTCCACCTGGGCCAGGACCCCCACGGCTCCCTTaGCTTTTCTCTGTTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ATDRSAGVTGQFSPPGPGPPRLP*LFSVWL Trigger: AAGCCAAACAGAGAAAAGGCAAGGGAGCCGTGGGGG...TCCTGGCCCAGGTGGAGAGAACTGTCCTGTTACTCCAGCTGAGCGATCTGTAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR CCA 90 bp | GATCGCTCAGCTGGAGTAACAGGACAGTTCTCTCCACCTGGGCCAGGAGCCACGGGGTTGAACTCATTCTaGAGATCCCAGTCGGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: DRSAGVTGQFSPPGPGATGLNSF*RSQSVI Trigger: GATCACCGACTGGGATCTCCAGAATGAGTTCAACCC...CGTGGCTCCTGGCCCAGGTGGAGAGAACTGTCCTGTTACTCCAGCTGAGCGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR CCA 90 bp | AGGAAGAGCCTGACTACCAGGACTGTGAGGACCTGGAGATCATCAGGAAAGCTACCCACACCCCGTAGGTaGCCTCCTCTTTGGTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RKSLTTRTVRTWRSSGKLPTPRR*PPLWSA Trigger: GGCAGACCAAAGAGGAGGCCACCTACGGGGTGTGGG...TAGCTTTCCTGATGATCTCCAGGTCCTCACAGTCCTGGTAGTCAGGCTCTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR TCA 90 bp | CAGACTCCCCAGTACACTGACACCTTTAATGATACATCTGTCCACTGGTTCCCACAGGATGAGCTTGGCTaGGGCGTCGCTGGGGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QTPQYTDTFNDTSVHWFPQDELG*GVAGVP Trigger: TGGCACCCCAGCGACGCCTCAGCCAAGCTCATCCTG...TGGGAACCAGTGGACAGATGTATCATTAAAGGTGTCAGTGTACTGGGGAGTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR TCA 90 bp | GAAGAGCCTGACTACCAGGACTGTGAGGACCTGGAGATCATCAGGAAAGCTACAACTTGGCCATGTCGATaGGGCTCTGCAGGGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EEPDYQDCEDLEIIRKATTWPCR*GSAGRW Trigger: CCACCTCCCTGCAGAGCCTCATCGACATGGCCAAGT...TGTAGCTTTCCTGATGATCTCCAGGTCCTCACAGTCCTGGTAGTCAGGCTCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR GCA 90 bp | CAGACTCCCCAGTACACTGACACCTTTAATGATACATCTGTCCACTGGTTCCCAGCCTCCCGGCGCTCCTaGATGGCCTCGTACTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QTPQYTDTFNDTSVHWFPASRRS*MASYWK Trigger: CTTCCAGTACGAGGCCATGCAGGAGCGCCGGGAGGC...TGGGAACCAGTGGACAGATGTATCATTAAAGGTGTCAGTGTACTGGGGAGTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR CCA 90 bp | GCTACAGATCGCTCAGCTGGAGTAACAGGACAGTTCTCTCCACCTGGGCCAGGATCCATGTGCTGCTGGTaGGGGTTGATGACAAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ATDRSAGVTGQFSPPGPGSMCCW*GLMTSS Trigger: AGAGCTTGTCATCAACCCCCACCAGCAGCACATGGA...TCCTGGCCCAGGTGGAGAGAACTGTCCTGTTACTCCAGCTGAGCGATCTGTAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR CCA 90 bp | CGCAGACTCCCCAGTACACTGACACCTTTAATGATACATCTGTCCACTGGTTCCCCCGGCGCTCCTGCATaGCCTCGTACTGGAAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RRLPSTLTPLMIHLSTGSPGAPA*PRTGSP Trigger: AGGACTTCCAGTACGAGGCCATGCAGGAGCGCCGGG...GGAACCAGTGGACAGATGTATCATTAAAGGTGTCAGTGTACTGGGGAGTCTGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR GCA 90 bp | GCTACAGATCGCTCAGCTGGAGTAACAGGACAGTTCTCTCCACCTGGGCCAGGAGATGAAGTTGACAGGTaGAGAATAGTCTCGGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ATDRSAGVTGQFSPPGPGDEVDR*RIVSGP Trigger: AGGGCCCGAGACTATTCTGCACCTGTCAACTTCATC...TCCTGGCCCAGGTGGAGAGAACTGTCCTGTTACTCCAGCTGAGCGATCTGTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR GCA 90 bp | GAAGAGCCTGACTACCAGGACTGTGAGGACCTGGAGATCATCAGGAAAGCTACACGCTCATACTGGAGCTaGCGGTCGCTCTGGATGATC | + |
|
Preference number: 4 (lower is better) Translates to: EEPDYQDCEDLEIIRKATRSYWS*RSLWMI Trigger: GATCATCCAGAGCGACCGGCAGCTCCAGTATGAGCG...TGTAGCTTTCCTGATGATCTCCAGGTCCTCACAGTCCTGGTAGTCAGGCTCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR GCA 90 bp | ACCAGGACTGTGAGGACCTGGAGATCATCAGGAAAGCTACAGATCGCTCAGCTGAAGGCGTCCATGTGCTaGTGGTGGGGGTTGATGACA | + |
|
Preference number: 4 (lower is better) Translates to: TRTVRTWRSSGKLQIAQLKASMC*WWGLMT Trigger: TGTCATCAACCCCCACCAGCAGCACATGGACGCCTT...CAGCTGAGCGATCTGTAGCTTTCCTGATGATCTCCAGGTCCTCACAGTCCTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR CCA 90 bp | AGGAAGAGCCTGACTACCAGGACTGTGAGGACCTGGAGATCATCAGGAAAGCTATCTTTGGTCTGCCAATaGCGCTGCCGGTTGGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RKSLTTRTVRTWRSSGKLSLVCQ*RCRLGL Trigger: CAACCCCAACCGGCAGCGCCATTGGCAGACCAAAGA...TAGCTTTCCTGATGATCTCCAGGTCCTCACAGTCCTGGTAGTCAGGCTCTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR CCA 90 bp | GACTACCAGGACTGTGAGGACCTGGAGATCATCAGGAAAGCTACAGATCGCTCAGGGTGGATCCACGAGTaGATGGGAACGGTGTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: DYQDCEDLEIIRKATDRSGWIHE*MGTVSV Trigger: GACAGACACCGTTCCCATCCACTCGTGGATCCACCC...TGAGCGATCTGTAGCTTTCCTGATGATCTCCAGGTCCTCACAGTCCTGGTAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR TCA 90 bp | GACTACCAGGACTGTGAGGACCTGGAGATCATCAGGAAAGCTACAGATCGCTCATGCGCTCTGTGTGGGTaGGGTAGGCAATGTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: DYQDCEDLEIIRKATDRSCALCG*GRQCSL Trigger: GAGAGAACATTGCCTACCTCACCCACACAGAGCGCA...TGAGCGATCTGTAGCTTTCCTGATGATCTCCAGGTCCTCACAGTCCTGGTAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR GCA 90 bp | CGCAGACTCCCCAGTACACTGACACCTTTAATGATACATCTGTCCACTGGTTCCAGCAGCTGCAGGTTGTaGTCCAGCTCAGGCAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RRLPSTLTPLMIHLSTGSSSCRL*SSSGSA Trigger: TGCACTGCCTGAGCTGGAGCACAACCTGCAGCTGCT...GGAACCAGTGGACAGATGTATCATTAAAGGTGTCAGTGTACTGGGGAGTCTGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR GCA 90 bp | AGGAAGAGCCTGACTACCAGGACTGTGAGGACCTGGAGATCATCAGGAAAGCTACTCTGGATGATCTCCTaGTCCGTGCGCTCAATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RKSLTTRTVRTWRSSGKLLWMIS*SVRSMS Trigger: GCTCATTGAGCGCACGGAGCAGGAGATCATCCAGAG...TAGCTTTCCTGATGATCTCCAGGTCCTCACAGTCCTGGTAGTCAGGCTCTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR CCA 90 bp | AGGAAGAGCCTGACTACCAGGACTGTGAGGACCTGGAGATCATCAGGAAAGCTATCTTCTTGCTCCCGCTaGGGTCTTTCCTCCATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RKSLTTRTVRTWRSSGKLSSCSR*GLSSIG Trigger: GCCAATGGAGGAAAGACCCCAGCGGGAGCAAGAAGA...TAGCTTTCCTGATGATCTCCAGGTCCTCACAGTCCTGGTAGTCAGGCTCTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR CCA 90 bp | CAGACTCCCCAGTACACTGACACCTTTAATGATACATCTGTCCACTGGTTCCCAAGCTGCCGGTCGCTCTaGATGATCTCCTGCTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: QTPQYTDTFNDTSVHWFPSCRSL*MISCSV Trigger: CACGGAGCAGGAGATCATCCAGAGCGACCGGCAGCT...TGGGAACCAGTGGACAGATGTATCATTAAAGGTGTCAGTGTACTGGGGAGTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR CCA 90 bp | CGCAGACTCCCCAGTACACTGACACCTTTAATGATACATCTGTCCACTGGTTCCTCCTTGACAGAAGGGTaGGCCAGCACCTGGTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RRLPSTLTPLMIHLSTGSSLTEG*ASTWSE Trigger: CTCAGACCAGGTGCTGGCCCACCCTTCTGTCAAGGA...GGAACCAGTGGACAGATGTATCATTAAAGGTGTCAGTGTACTGGGGAGTCTGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR TCA 90 bp | GAAGAGCCTGACTACCAGGACTGTGAGGACCTGGAGATCATCAGGAAAGCTACACGCTGTGCTTGTGGCTaGTTTGGCTGTAGCTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: EEPDYQDCEDLEIIRKATRCACG*FGCSCS Trigger: ACTACAGCTACAGCCAAATCAGCCACAAGCACAGCG...TGTAGCTTTCCTGATGATCTCCAGGTCCTCACAGTCCTGGTAGTCAGGCTCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR CCA 90 bp | CAGACTCCCCAGTACACTGACACCTTTAATGATACATCTGTCCACTGGTTCCCATTTTGCCTCCAAAGCTaGGCCTCTCCTCGTCCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: QTPQYTDTFNDTSVHWFPFCLQS*ASPRPS Trigger: ACTCGGACGAGGAGAGGCCCAGCTTTGGAGGCAAAA...TGGGAACCAGTGGACAGATGTATCATTAAAGGTGTCAGTGTACTGGGGAGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR CCA 90 bp | ACCAGGACTGTGAGGACCTGGAGATCATCAGGAAAGCTACAGATCGCTCAGCTGTTAGGGAAGATGAGCTaGTCCAGGATATTGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TRTVRTWRSSGKLQIAQLLGKMS*SRILSR Trigger: CCTGGACAATATCCTGGACCAGCTCATCTTCCCTAA...CAGCTGAGCGATCTGTAGCTTTCCTGATGATCTCCAGGTCCTCACAGTCCTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR TCA 90 bp | CAGACTCCCCAGTACACTGACACCTTTAATGATACATCTGTCCACTGGTTCCCACCAGGTACCACTTGGTaGTCTCCTCGTAATTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QTPQYTDTFNDTSVHWFPPGTTW*SPRNWD Trigger: GTCCCAATTACGAGGAGATCACCAAGTGGTACCTGG...TGGGAACCAGTGGACAGATGTATCATTAAAGGTGTCAGTGTACTGGGGAGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR GCA 90 bp | CGCAGACTCCCCAGTACACTGACACCTTTAATGATACATCTGTCCACTGGTTCCCAGTTCCTTCTGAGGTaGTGTGAGCTTCTTGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: RRLPSTLTPLMIHLSTGSQFLLR*CELLAD Trigger: GTCAGCAAGAAGCTCACAGCACCTCAGAAGGAACTG...GGAACCAGTGGACAGATGTATCATTAAAGGTGTCAGTGTACTGGGGAGTCTGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR CCA 90 bp | CAGACTCCCCAGTACACTGACACCTTTAATGATACATCTGTCCACTGGTTCCCAGCACCTGGAGCCACTTaGGGAAGAAATGCTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QTPQYTDTFNDTSVHWFPAPGAT*GRNASP Trigger: TGGAGAAGCATTTCTTCCCCAAGTGGCTCCAGGTGC...TGGGAACCAGTGGACAGATGTATCATTAAAGGTGTCAGTGTACTGGGGAGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR TCA 90 bp | GACACCTTTAATGATACATCTGTCCACTGGTTCCCACTATTGAAGCTGGAAGGAGGACTTGGTTCCTCCTaGAAAGCCTTTCTGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: DTFNDTSVHWFPLLKLEGGLGSS*KAFLAG Trigger: CCCAGCCAGAAAGGCTTTTCAGGAGGAACCAAGTCC...TCCTTCCAGCTTCAATAGTGGGAACCAGTGGACAGATGTATCATTAAAGGTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR GCA 90 bp | GACACCTTTAATGATACATCTGTCCACTGGTTCCCACTATTGAAGCTGGAAGGATCATCGGGCACGCTGTaGTTGTGGCTGATTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DTFNDTSVHWFPLLKLEGSSGTL*LWLIWL Trigger: CAGCCAAATCAGCCACAAGCACAGCGTGCCCGATGA...TCCTTCCAGCTTCAATAGTGGGAACCAGTGGACAGATGTATCATTAAAGGTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR TCA 90 bp | GACACCTTTAATGATACATCTGTCCACTGGTTCCCACTATTGAAGCTGGAAGGAAGCTGCCAAAGTCCATaGAGGACTTGGTTCCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: DTFNDTSVHWFPLLKLEGSCQSP*RTWFLL Trigger: CAGGAGGAACCAAGTCCTTCATGGACTTTGGCAGCT...TCCTTCCAGCTTCAATAGTGGGAACCAGTGGACAGATGTATCATTAAAGGTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR GCA 90 bp | CAGACTCCCCAGTACACTGACACCTTTAATGATACATCTGTCCACTGGTTCCCAAATGTTGTGCTCCTCTaGCTTAGTCTCGATGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QTPQYTDTFNDTSVHWFPNVVLL*LSLDEV Trigger: GACCTCATCGAGACTAAGGCAGAGGAGCACAACATT...TGGGAACCAGTGGACAGATGTATCATTAAAGGTGTCAGTGTACTGGGGAGTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR GCA 90 bp | CAGACTCCCCAGTACACTGACACCTTTAATGATACATCTGTCCACTGGTTCCCAATGAACACAATGTTGTaGTCCTCTGCCTTAGTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: QTPQYTDTFNDTSVHWFPMNTML*SSALVS Trigger: CGAGACTAAGGCAGAGGAGCACAACATTGTGTTCAT...TGGGAACCAGTGGACAGATGTATCATTAAAGGTGTCAGTGTACTGGGGAGTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR CCA 90 bp | CAGACTCCCCAGTACACTGACACCTTTAATGATACATCTGTCCACTGGTTCCCACTTGTAAGAGTACTTTaGCTTCTTCTTGCTCCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: QTPQYTDTFNDTSVHWFPLVRVL*LLLAPA Trigger: AGCGGGAGCAAGAAGAAGCCAAAGTACTCTTACAAG...TGGGAACCAGTGGACAGATGTATCATTAAAGGTGTCAGTGTACTGGGGAGTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| 3UTR CAA 72 bp | GGCCTGGTCTCCCAAATAGAGACGTTATTCATCAGCTaGGTTTACAGTGCTGTTTATTCACACCGGTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GLVSQIETLFIS*VYSAVYSHRSG Trigger: ACCAGACCGGTGTGAATAAACAGCACTGTAAACCAAGCTGATGAATAACGTCTCTATTTGGGAGACCAGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR CCA 90 bp | GACACCTTTAATGATACATCTGTCCACTGGTTCCCACTATTGAAGCTGGAAGGACCTGAAAAGCCTTTCTaGCTGGGCTTAAAATTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: DTFNDTSVHWFPLLKLEGPEKPF*LGLKLP Trigger: TGGCAATTTTAAGCCCAGCCAGAAAGGCTTTTCAGG...TCCTTCCAGCTTCAATAGTGGGAACCAGTGGACAGATGTATCATTAAAGGTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS GCA 90 bp | ATGCGGGCACACTCATCCAGAGTGAGGGGGTCGGCGCCATGGGGCTaGATGCGGCGCTCACATTCCTCCACCAGGGCCAGCACCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: MRAHSSRVRGSAPWG*MRRSHSSTRASTLL Trigger: CAGCAAGGTGCTGGCCCTGGTGGAGGAATGTGAGCGCCGCATGCAGCCCCATGGCGCCGACCCCCTCACTCTGGATGAGTGTGCCCGCAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS TCA 90 bp | ACTTGCTGCGCACAGGGGAGTAGAGTGGCTCCAGGCGGGCCTGCATaGGCGGCAGCCACGGGTGGATCCACGAGTGGATGGGAACGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: TCCAQGSRVAPGGPA*AAATGGSTSGWERC Trigger: ACACCGTTCCCATCCACTCGTGGATCCACCCGTGGCTGCCGCTCATGCAGGCCCGCCTGGAGCCACTCTACTCCCCTGTGCGCAGCAAGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CCA 90 bp | TCAAAGATGCGGGCACACTCATCCAGAGTGAGGGGGTCGGCGCCATaGGGCTGCATGCGGCGCTCACATTCCTCCACCAGGGCCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: SKMRAHSSRVRGSAP*GCMRRSHSSTRAST Trigger: GGTGCTGGCCCTGGTGGAGGAATGTGAGCGCCGCATGCAGCCCCATGGCGCCGACCCCCTCACTCTGGATGAGTGTGCCCGCATCTTTGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CCA 90 bp | TCCAGGCGGGCCTGCATGAGCGGCAGCCACGGGTGGATCCACGAGTaGATGGGAACGGTGTCTGTCAGGGGGTTCCAGTTGTCCACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SRRACMSGSHGWIHE*MGTVSVRGFQLSTS Trigger: GGAGGTGGACAACTGGAACCCCCTGACAGACACCGTTCCCATCCACTCGTGGATCCACCCGTGGCTGCCGCTCATGCAGGCCCGCCTGGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CCA 90 bp | TTTCTGCAGTGCGCTGGACAACTTGCTGCGCACAGGGGAGTAGAGTaGCTCCAGGCGGGCCTGCATGAGCGGCAGCCACGGGTGGATCCA | + |
|
Preference number: 5 (lower is better) Translates to: FLQCAGQLAAHRGVE*LQAGLHERQPRVDP Trigger: TGGATCCACCCGTGGCTGCCGCTCATGCAGGCCCGCCTGGAGCCACTCTACTCCCCTGTGCGCAGCAAGTTGTCCAGCGCACTGCAGAAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS GCA 90 bp | ATGAAGGCCTCCCAGGACCCAGGGGTGAGGACCTCTTTCCAGGGCTaGAGGATGAGCTTGGCTGAGGCGTCGCTGGGGTGCCATTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: MKASQDPGVRTSFQG*RMSLAEASLGCHFC Trigger: GCAGAAATGGCACCCCAGCGACGCCTCAGCCAAGCTCATCCTGCAGCCCTGGAAAGAGGTCCTCACCCCTGGGTCCTGGGAGGCCTTCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS TCA 90 bp | CCCAGGGGTGAGGACCTCTTTCCAGGGCTGCAGGATGAGCTTGGCTaGGGCGTCGCTGGGGTGCCATTTCTGCAGTGCGCTGGACAACTT | + |
|
Preference number: 5 (lower is better) Translates to: PRGEDLFPGLQDELG*GVAGVPFLQCAGQL Trigger: AAGTTGTCCAGCGCACTGCAGAAATGGCACCCCAGCGACGCCTCAGCCAAGCTCATCCTGCAGCCCTGGAAAGAGGTCCTCACCCCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS GCA 90 bp | CGGTCGCTCTGGATGATCTCCTGCTCCGTGCGCTCAATGAGCAGCTaGAGGTTGTGCTCCAGCTCAGGCAGTGCAAAGCCCGGCATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RSLWMISCSVRSMSS*RLCSSSGSAKPGIL Trigger: CAGGATGCCGGGCTTTGCACTGCCTGAGCTGGAGCACAACCTGCAGCTGCTCATTGAGCGCACGGAGCAGGAGATCATCCAGAGCGACCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS GCA 90 bp | ACACCGATGCCTCTCTGTGCCATGTTCTCAGCCTCCCGGCGCTCCTaGATGGCCTCGTACTGGAAGTCCTTCCTGCGCTCTGTGTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TPMPLCAMFSASRRS*MASYWKSFLRSVWV Trigger: CACCCACACAGAGCGCAGGAAGGACTTCCAGTACGAGGCCATGCAGGAGCGCCGGGAGGCTGAGAACATGGCACAGAGAGGCATCGGTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS TCA 90 bp | CATGTGCAAGAACCTCGGCCGTCTTCTCCAGCTCGTGTGACAGGCTaGCCACCATGTCCCGCTCATACTGGAGCTGCCGGTCGCTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: HVQEPRPSSPARVTG*PPCPAHTGAAGRSG Trigger: TCCAGAGCGACCGGCAGCTCCAGTATGAGCGGGACATGGTGGTCAGCCTGTCACACGAGCTGGAGAAGACGGCCGAGGTTCTTGCACATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS TCA 90 bp | ACGCTCCTCATGTGCAAGAACCTCGGCCGTCTTCTCCAGCTCGTGTaGCAGGCTGACCACCATGTCCCGCTCATACTGGAGCTGCCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: TLLMCKNLGRLLQLV*QADHHVPLILELPV Trigger: GACCGGCAGCTCCAGTATGAGCGGGACATGGTGGTCAGCCTGTCACACGAGCTGGAGAAGACGGCCGAGGTTCTTGCACATGAGGAGCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS GCA 90 bp | AGCTCGTGTGACAGGCTGACCACCATGTCCCGCTCATACTGGAGCTaGCGGTCGCTCTGGATGATCTCCTGCTCCGTGCGCTCAATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSCDRLTTMSRSYWS*RSLWMISCSVRSMS Trigger: GCTCATTGAGCGCACGGAGCAGGAGATCATCCAGAGCGACCGGCAGCTCCAGTATGAGCGGGACATGGTGGTCAGCCTGTCACACGAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS GCA 90 bp | GCCCAGCTGTCCAGGAAATCCACCATCGGCTCACAGTTCCGTGGCTaGCACTGGGCGACGACATTCCGAACGAAAGGCATCCAGACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AQLSRKSTIGSQFRG*HWATTFRTKGIQTS Trigger: GGAGGTCTGGATGCCTTTCGTTCGGAATGTCGTCGCCCAGTGGCAGCCACGGAACTGTGAGCCGATGGTGGATTTCCTGGACAGCTGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CCA 90 bp | AGGCTGACCACCATGTCCCGCTCATACTGGAGCTGCCGGTCGCTCTaGATGATCTCCTGCTCCGTGCGCTCAATGAGCAGCTGCAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RLTTMSRSYWSCRSL*MISCSVRSMSSCRL Trigger: CAACCTGCAGCTGCTCATTGAGCGCACGGAGCAGGAGATCATCCAGAGCGACCGGCAGCTCCAGTATGAGCGGGACATGGTGGTCAGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CCA 90 bp | TTCTCCAGCTCGTGTGACAGGCTGACCACCATGTCCCGCTCATACTaGAGCTGCCGGTCGCTCTGGATGATCTCCTGCTCCGTGCGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: FSSSCDRLTTMSRSY*SCRSLWMISCSVRS Trigger: TGAGCGCACGGAGCAGGAGATCATCCAGAGCGACCGGCAGCTCCAGTATGAGCGGGACATGGTGGTCAGCCTGTCACACGAGCTGGAGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR CAA 90 bp | GTGCACACCACACCAGATCCTTTGCCCGGCCAGGAATACAGGCCGACTGGGGACCGCTGCCGGTTGGGGTaGAACTCATTCTGGAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: VHTTPDPLPGQEYRPTGDRCRLG*NSFWRS Trigger: GGATCTCCAGAATGAGTTCAACCCCAACCGGCAGCG...GTCCCCAGTCGGCCTGTATTCCTGGCCGGGCAAAGGATCTGGTGTGGTGTGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR CAA 90 bp | GATCGCTCAGCTGGAGTAACAGGACAGTTCTCTCCACCTGGGCCAGGAGCCACGTTGCTGACCCTGCCCTaGGCCTTCAGCTCCTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: DRSAGVTGQFSPPGPGATLLTLP*AFSSST Trigger: TGTGGAGGAGCTGAAGGCCAAGGGCAGGGTCAGCAA...CGTGGCTCCTGGCCCAGGTGGAGAGAACTGTCCTGTTACTCCAGCTGAGCGATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS TCA 90 bp | GCGCCAGCAATGGCACCCCTTCATCGGGCACGCTGTGCTTGTGGCTaGTTTGGCTGTAGCTGTAGTACACCTTCTGCTCCCGGCCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: APAMAPLHRARCACG*FGCSCSTPSAPGLS Trigger: TGACAGGCCGGGAGCAGAAGGTGTACTACAGCTACAGCCAAATCAGCCACAAGCACAGCGTGCCCGATGAAGGGGTGCCATTGCTGGCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS TCA 90 bp | ACTGGGCGACGACATTCCGAACGAAAGGCATCCAGACCTCCCACATaGGCCTGTGGAAGGCATCGGAGGACAGGTCCTGGCTGCTGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: TGRRHSERKASRPPT*ACGRHRRTGPGCCE Trigger: CTCACAGCAGCCAGGACCTGTCCTCCGATGCCTTCCACAGGCTCATGTGGGAGGTCTGGATGCCTTTCGTTCGGAATGTCGTCGCCCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS TCA 90 bp | CCTGCATGGCCTCGTACTGGAAGTCCTTCCTGCGCTCTGTGTGGGTaGGGTAGGCAATGTTCTCTCTCGCACCCGGCTGCATGTAGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: PAWPRTGSPSCALCG*GRQCSLSHPAACRH Trigger: GTGCCTACATGCAGCCGGGTGCGAGAGAGAACATTGCCTACCTCACCCACACAGAGCGCAGGAAGGACTTCCAGTACGAGGCCATGCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS TCA 90 bp | ACGTCTTCTCGCCCTGCACAAACACCACACCCCGGTCAATGTAGATaGCGATGCGGCCGAAGGTGTAGAGCTGCTTGCCCTCGTGCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: TSSRPAQTPHPGQCR*RCGRRCRAACPRAA Trigger: AGCGGCACGAGGGCAAGCAGCTCTACACCTTCGGCCGCATCGTCATCTACATTGACCGGGGTGTGGTGTTTGTGCAGGGCGAGAAGACGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS GCA 90 bp | ATGTCCCGCTCATACTGGAGCTGCCGGTCGCTCTGGATGATCTCCTaGTCCGTGCGCTCAATGAGCAGCTGCAGGTTGTGCTCCAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: MSRSYWSCRSLWMIS*SVRSMSSCRLCSSS Trigger: TGAGCTGGAGCACAACCTGCAGCTGCTCATTGAGCGCACGGAGCAGGAGATCATCCAGAGCGACCGGCAGCTCCAGTATGAGCGGGACAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CCA 90 bp | GTGTGCCCAGCTGTCCAGGAAATCCACCATCGGCTCACAGTTCCGTaGCTGCCACTGGGCGACGACATTCCGAACGAAAGGCATCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: VCPAVQEIHHRLTVP*LPLGDDIPNERHPD Trigger: GTCTGGATGCCTTTCGTTCGGAATGTCGTCGCCCAGTGGCAGCCACGGAACTGTGAGCCGATGGTGGATTTCCTGGACAGCTGGGCACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR CAA 90 bp | CTGGTTCCCACTATTGAAGCTGGAAGGACTGCCTGGGGACCTGTGGGCATCCCATGCTGCTGGTGGGGGTaGATGACAAGCTCTCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LVPTIEAGRTAWGPVGIPCCWWG*MTSSPR Trigger: CCTGGGAGAGCTTGTCATCAACCCCCACCAGCAGCA...TGGGATGCCCACAGGTCCCCAGGCAGTCCTTCCAGCTTCAATAGTGGGAACCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CCA 90 bp | CTGTCCAGGAAATCCACCATCGGCTCACAGTTCCGTGGCTGCCACTaGGCGACGACATTCCGAACGAAAGGCATCCAGACCTCCCACATG | + |
|
Preference number: 5 (lower is better) Translates to: LSRKSTIGSQFRGCH*ATTFRTKGIQTSHM Trigger: CATGTGGGAGGTCTGGATGCCTTTCGTTCGGAATGTCGTCGCCCAGTGGCAGCCACGGAACTGTGAGCCGATGGTGGATTTCCTGGACAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR CAA 90 bp | CTGGTTCCCACTATTGAAGCTGGAAGGACTGCCTGGGGACCTGTGGGCATCCCACAATGGCGCTGCCGGTaGGGGTTGAACTCATTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LVPTIEAGRTAWGPVGIPQWRCR*GLNSFW Trigger: CCAGAATGAGTTCAACCCCAACCGGCAGCGCCATTG...TGGGATGCCCACAGGTCCCCAGGCAGTCCTTCCAGCTTCAATAGTGGGAACCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR CAA 90 bp | GGGCCAGGAGCCACGGTGCACACCACACCAGATCCTTTGCCCGGCCAGGAATACGTGCTTGTGGCTGATTaGGCTGTAGCTGTAGTACAC | + |
|
Preference number: 5 (lower is better) Translates to: GPGATVHTTPDPLPGQEYVLVAD*AVAVVH Trigger: GTGTACTACAGCTACAGCCAAATCAGCCACAAGCAC...GTATTCCTGGCCGGGCAAAGGATCTGGTGTGGTGTGCACCGTGGCTCCTGGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS GCA 90 bp | GAGCTGGTCCAGGATATTGTCCAGGATCCACACGGGGATGATGTGTaGCCAGCTGTCCAGGAAATCCACCATCGGCTCACAGTTCCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ELVQDIVQDPHGDDV*PAVQEIHHRLTVPW Trigger: CCACGGAACTGTGAGCCGATGGTGGATTTCCTGGACAGCTGGGCACACATCATCCCCGTGTGGATCCTGGACAATATCCTGGACCAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS GCA 90 bp | GCCTGTCATGTCGATCACCTTGACCTGAGACAGTTCCTTCTGAGGTaGTGTGAGCTTCTTGCTGACCCTGCCCTTGGCCTTCAGCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ACHVDHLDLRQFLLR*CELLADPALGLQLL Trigger: GAGGAGCTGAAGGCCAAGGGCAGGGTCAGCAAGAAGCTCACAGCACCTCAGAAGGAACTGTCTCAGGTCAAGGTGATCGACATGACAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CCA 90 bp | CCTGCCCTTGGCCTTCAGCTCCTCCACAGTCTTGTAAGAGTACTTTaGCTTCTTCTTGCTCCCGCTGGGGTCTTTCCTCCATTGGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PALGLQLLHSLVRVL*LLLAPAGVFPPLAQ Trigger: CTGAGCCAATGGAGGAAAGACCCCAGCGGGAGCAAGAAGAAGCCAAAGTACTCTTACAAGACTGTGGAGGAGCTGAAGGCCAAGGGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CCA 90 bp | AGCGCTTCGTTGAACTTGTCCTTGACAGAAGGGTGGGCCAGCACCTaGTCTGAGAACATAGACTTCCAGCCCAGGTACCACTTGGTGATC | + |
|
Preference number: 5 (lower is better) Translates to: SASLNLSLTEGWAST*SENIDFQPRYHLVI Trigger: GATCACCAAGTGGTACCTGGGCTGGAAGTCTATGTTCTCAGACCAGGTGCTGGCCCACCCTTCTGTCAAGGACAAGTTCAACGAAGCGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR CAA 90 bp | AGATCGCTCAGCTGGAGTAACAGGACAGTTCTCTCCACCTGGGCCAGGAGCCACTCTTGTAAGAGTACTTaGGCTTCTTCTTGCTCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: RSLSWSNRTVLSTWARSHSCKST*ASSCSR Trigger: GCGGGAGCAAGAAGAAGCCAAAGTACTCTTACAAGA...GTGGCTCCTGGCCCAGGTGGAGAGAACTGTCCTGTTACTCCAGCTGAGCGATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS TCA 90 bp | TTCGTTGAACTTGTCCTTGACAGAAGGGTGGGCCAGCACCTGGTCTaGGAACATAGACTTCCAGCCCAGGTACCACTTGGTGATCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: FVELVLDRRVGQHLV*EHRLPAQVPLGDLL Trigger: GAGGAGATCACCAAGTGGTACCTGGGCTGGAAGTCTATGTTCTCAGACCAGGTGCTGGCCCACCCTTCTGTCAAGGACAAGTTCAACGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS GCA 90 bp | GTGCCGCTTGCCGATGACAGGCATGAACACAATGTTGTGCTCCTCTaGCTTAGTCTCGATGAGGTCCTTAAAGTTCATGGGCACGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VPLADDRHEHNVVLL*LSLDEVLKVHGHGA Trigger: AGCTCCGTGCCCATGAACTTTAAGGACCTCATCGAGACTAAGGCAGAGGAGCACAACATTGTGTTCATGCCTGTCATCGGCAAGCGGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS GCA 90 bp | TTGCCCTCGTGCCGCTTGCCGATGACAGGCATGAACACAATGTTGTaGTCCTCTGCCTTAGTCTCGATGAGGTCCTTAAAGTTCATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LPSCRLPMTGMNTML*SSALVSMRSLKFMG Trigger: GCCCATGAACTTTAAGGACCTCATCGAGACTAAGGCAGAGGAGCACAACATTGTGTTCATGCCTGTCATCGGCAAGCGGCACGAGGGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CCA 90 bp | TCTTTGGTCTGCCAATGGCGCTGCCGGTTGGGGTTGAACTCATTCTaGAGATCCCAGTCGGTGATCTCAAAGTTCTCCCTCTCATCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLVCQWRCRLGLNSF*RSQSVISKFSLSSS Trigger: TGACGATGAGAGGGAGAACTTTGAGATCACCGACTGGGATCTCCAGAATGAGTTCAACCCCAACCGGCAGCGCCATTGGCAGACCAAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031288.14 ENSMUST00000129528.2 |
||
| CDS-3UTR CAA 90 bp | CTGGTTCCCACTATTGAAGCTGGAAGGACTGCCTGGGGACCTGTGGGCATCCCACCGTCTTTAACTTCTTaGGTCCTAAATCCTTCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LVPTIEAGRTAWGPVGIPPSLTS*VLNPSG Trigger: TCCCGAAGGATTTAGGACCAAAGAAGTTAAAGACGG...TGGGATGCCCACAGGTCCCCAGGCAGTCCTTCCAGCTTCAATAGTGGGAACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS GCA 90 bp | CCTTCAGCTCCTCCACAGTCTTGTAAGAGTACTTTGGCTTCTTCTTaGTCCCGCTGGGGTCTTTCCTCCATTGGCTCAGCTCCTTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: PSAPPQSCKSTLASS*SRWGLSSIGSAPSE Trigger: TTCAGAAGGAGCTGAGCCAATGGAGGAAAGACCCCAGCGGGAGCAAGAAGAAGCCAAAGTACTCTTACAAGACTGTGGAGGAGCTGAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CCA 90 bp | TTCATTATGTCGAGCGCTTCGTTGAACTTGTCCTTGACAGAAGGGTaGGCCAGCACCTGGTCTGAGAACATAGACTTCCAGCCCAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: FIMSSASLNLSLTEG*ASTWSENIDFQPRY Trigger: GTACCTGGGCTGGAAGTCTATGTTCTCAGACCAGGTGCTGGCCCACCCTTCTGTCAAGGACAAGTTCAACGAAGCGCTCGACATAATGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CCA 90 bp | CCTCCACAGTCTTGTAAGAGTACTTTGGCTTCTTCTTGCTCCCGCTaGGGTCTTTCCTCCATTGGCTCAGCTCCTTCTGAAACTCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PPQSCKSTLASSCSR*GLSSIGSAPSETPL Trigger: AAGAGGAGTTTCAGAAGGAGCTGAGCCAATGGAGGAAAGACCCCAGCGGGAGCAAGAAGAAGCCAAAGTACTCTTACAAGACTGTGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR CAA 90 bp | ACCAGGACTGTGAGGACCTGGAGATCATCAGGAAAGCTACAGATCGCTCAGCTGTGGCTGGGCTTAAAATaGCCACCCGTCTTTAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: TRTVRTWRSSGKLQIAQLWLGLK*PPVFNF Trigger: GAAGTTAAAGACGGGTGGCAATTTTAAGCCCAGCCA...CAGCTGAGCGATCTGTAGCTTTCCTGATGATCTCCAGGTCCTCACAGTCCTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CCA 90 bp | CTGCCAAAGTCCATGAAGGACTTGGTTCCTCCTGAAAAGCCTTTCTaGCTGGGCTTAAAATTGCCACCCGTCTTTAACTTCTTTGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LPKSMKDLVPPEKPF*LGLKLPPVFNFFGP Trigger: AGGACCAAAGAAGTTAAAGACGGGTGGCAATTTTAAGCCCAGCCAGAAAGGCTTTTCAGGAGGAACCAAGTCCTTCATGGACTTTGGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS-3UTR CAA 90 bp | GACACCTTTAATGATACATCTGTCCACTGGTTCCCACTATTGAAGCTGGAAGGAAAGTCCATGAAGGACTaGGTTCCTCCTGAAAAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: DTFNDTSVHWFPLLKLEGKSMKD*VPPEKP Trigger: AGGCTTTTCAGGAGGAACCAAGTCCTTCATGGACTT...TCCTTCCAGCTTCAATAGTGGGAACCAGTGGACAGATGTATCATTAAAGGTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CCA 72 bp | CCTCGTCCGAGTCTCGCTCCGCCCACACCCCGTAGGTaGCCTCCTCTTTGGTCTGCCAATGGCGCTGCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: PRPSLAPPTPRR*PPLWSANGAAG Trigger: ACCGGCAGCGCCATTGGCAGACCAAAGAGGAGGCCACCTACGGGGTGTGGGCGGAGCGAGACTCGGACGAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031288.14 ENSMUST00000129528.2 |
||
| CDS CCA 72 bp | CCGAGTCGGCCACGGGGAAGTCCTGCAGAGACTGAGTaGTCCTCTCCGAGCCATAGGCCCCCACGGCTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: PSRPRGSPAETE*SSPSHRPPRLP Trigger: AGGGAGCCGTGGGGGCCTATGGCTCGGAGAGGACCACTCAGTCTCTGCAGGACTTCCCCGTGGCCGACTCGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031288.14 ENSMUST00000198238.5 |
||
| CDS CCA 72 bp | CGGGCACACTCATCCAGAGTGAGGGGGTCGGCGCCATaGGGCTGCATGCGGCGCTCACATTCCTCCACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RAHSSRVRGSAP*GCMRRSHSSTR Trigger: CCTGGTGGAGGAATGTGAGCGCCGCATGCAGCCCCATGGCGCCGACCCCCTCACTCTGGATGAGTGTGCCCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CCA 72 bp | GGCTCCAGGCGGGCCTGCATGAGCGGCAGCCACGGGTaGATCCACGAGTGGATGGGAACGGTGTCTGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GSRRACMSGSHG*IHEWMGTVSVR Trigger: CCTGACAGACACCGTTCCCATCCACTCGTGGATCCACCCGTGGCTGCCGCTCATGCAGGCCCGCCTGGAGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS GCA 72 bp | TCCCAGGACCCAGGGGTGAGGACCTCTTTCCAGGGCTaGAGGATGAGCTTGGCTGAGGCGTCGCTGGGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SQDPGVRTSFQG*RMSLAEASLGC Trigger: GCACCCCAGCGACGCCTCAGCCAAGCTCATCCTGCAGCCCTGGAAAGAGGTCCTCACCCCTGGGTCCTGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CCA 72 bp | GTGCAAAGCCCGGCATCCTGGCTTCCTTGCCGGCTGTaGGGGGCAGCTGCGCCAGCAATGGCACCCCTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: VQSPASWLPCRL*GAAAPAMAPLH Trigger: ATGAAGGGGTGCCATTGCTGGCGCAGCTGCCCCCCACAGCCGGCAAGGAAGCCAGGATGCCGGGCTTTGCAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS GCA 72 bp | CGCTGGGGTGCCATTTCTGCAGTGCGCTGGACAACTTaGTGCGCACAGGGGAGTAGAGTGGCTCCAGGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: RWGAISAVRWTT*CAQGSRVAPGG Trigger: CCCGCCTGGAGCCACTCTACTCCCCTGTGCGCAGCAAGTTGTCCAGCGCACTGCAGAAATGGCACCCCAGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS GCA 72 bp | GACAGGCTGACCACCATGTCCCGCTCATACTGGAGCTaGCGGTCGCTCTGGATGATCTCCTGCTCCGTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: DRLTTMSRSYWS*RSLWMISCSVR Trigger: GCGCACGGAGCAGGAGATCATCCAGAGCGACCGGCAGCTCCAGTATGAGCGGGACATGGTGGTCAGCCTGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS GCA 72 bp | TGGGGTGCCATTTCTGCAGTGCGCTGGACAACTTGCTaGGCACAGGGGAGTAGAGTGGCTCCAGGCGGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: WGAISAVRWTTC*AQGSRVAPGGP Trigger: AGGCCCGCCTGGAGCCACTCTACTCCCCTGTGCGCAGCAAGTTGTCCAGCGCACTGCAGAAATGGCACCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS GCA 72 bp | GGCTGCAGGATGAGCTTGGCTGAGGCGTCGCTGGGGTaGCATTTCTGCAGTGCGCTGGACAACTTGCTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: GCRMSLAEASLG*HFCSALDNLLR Trigger: GCGCAGCAAGTTGTCCAGCGCACTGCAGAAATGGCACCCCAGCGACGCCTCAGCCAAGCTCATCCTGCAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CCA 72 bp | GCCTGCATGAGCGGCAGCCACGGGTGGATCCACGAGTaGATGGGAACGGTGTCTGTCAGGGGGTTCCAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: ACMSGSHGWIHE*MGTVSVRGFQL Trigger: CAACTGGAACCCCCTGACAGACACCGTTCCCATCCACTCGTGGATCCACCCGTGGCTGCCGCTCATGCAGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CAA 90 bp | TGCTGGTGGGGGTTGATGACAAGCTCTCCCAGGCACATGCCCAGCTaGGGCACGATGTTCCTGAGCATGAAGGCCTCCCAGGACCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: CWWGLMTSSPRHMPS*GTMFLSMKASQDPG Trigger: CCCTGGGTCCTGGGAGGCCTTCATGCTCAGGAACATCGTGCCCAAGCTGGGCATGTGCCTGGGAGAGCTTGTCATCAACCCCCACCAGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS TCA 72 bp | GAACCTCGGCCGTCTTCTCCAGCTCGTGTGACAGGCTaGCCACCATGTCCCGCTCATACTGGAGCTGCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: EPRPSSPARVTG*PPCPAHTGAAG Trigger: ACCGGCAGCTCCAGTATGAGCGGGACATGGTGGTCAGCCTGTCACACGAGCTGGAGAAGACGGCCGAGGTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS TCA 72 bp | GAGGACCTCTTTCCAGGGCTGCAGGATGAGCTTGGCTaGGGCGTCGCTGGGGTGCCATTTCTGCAGTGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: EDLFPGLQDELG*GVAGVPFLQCA Trigger: AGCGCACTGCAGAAATGGCACCCCAGCGACGCCTCAGCCAAGCTCATCCTGCAGCCCTGGAAAGAGGTCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS GCA 72 bp | TCCTGCTCCGTGCGCTCAATGAGCAGCTGCAGGTTGTaGTCCAGCTCAGGCAGTGCAAAGCCCGGCATCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SCSVRSMSSCRL*SSSGSAKPGIL Trigger: CAGGATGCCGGGCTTTGCACTGCCTGAGCTGGAGCACAACCTGCAGCTGCTCATTGAGCGCACGGAGCAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS GCA 72 bp | ATGAGCTTGGCTGAGGCGTCGCTGGGGTGCCATTTCTaGAGTGCGCTGGACAACTTGCTGCGCACAGGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: MSLAEASLGCHF*SALDNLLRTGE Trigger: CTCCCCTGTGCGCAGCAAGTTGTCCAGCGCACTGCAGAAATGGCACCCCAGCGACGCCTCAGCCAAGCTCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS GCA 72 bp | CCTCTCTGTGCCATGTTCTCAGCCTCCCGGCGCTCCTaGATGGCCTCGTACTGGAAGTCCTTCCTGCGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PLCAMFSASRRS*MASYWKSFLRS Trigger: AGAGCGCAGGAAGGACTTCCAGTACGAGGCCATGCAGGAGCGCCGGGAGGCTGAGAACATGGCACAGAGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CCA 72 bp | GTGCAGAATAGTCTCGGGCCCTTTTGCCTCCAAAGCTaGGCCTCTCCTCGTCCGAGTCTCGCTCCGCCCACA | + |
|
Preference number: 6 (lower is better) Translates to: VQNSLGPFCLQS*ASPRPSLAPPT Trigger: TGTGGGCGGAGCGAGACTCGGACGAGGAGAGGCCCAGCTTTGGAGGCAAAAGGGCCCGAGACTATTCTGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CCA 72 bp | CTGAGGCGTCGCTGGGGTGCCATTTCTGCAGTGCGCTaGACAACTTGCTGCGCACAGGGGAGTAGAGTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LRRRWGAISAVR*TTCCAQGSRVA Trigger: AGCCACTCTACTCCCCTGTGCGCAGCAAGTTGTCCAGCGCACTGCAGAAATGGCACCCCAGCGACGCCTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CAA 90 bp | CTCTGGATGATCTCCTGCTCCGTGCGCTCAATGAGCAGCTGCAGGTaGTGCTCCAGCTCAGGCAGTGCAAAGCCCGGCATCCTGGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LWMISCSVRSMSSCR*CSSSGSAKPGILAS Trigger: GGAAGCCAGGATGCCGGGCTTTGCACTGCCTGAGCTGGAGCACAACCTGCAGCTGCTCATTGAGCGCACGGAGCAGGAGATCATCCAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS TCA 72 bp | GCTGGTCGTTCTCCAGGAGGCTCTTCCACTTGGAGATaGTCTGGGTGCCATAGCTGCCGTCCTCGAGGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: AGRSPGGSSTWR*SGCHSCRPRGG Trigger: ACCCCCTCGAGGACGGCAGCTATGGCACCCAGATCATCTCCAAGTGGAAGAGCCTCCTGGAGAACGACCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CCA 72 bp | ACCATGTCCCGCTCATACTGGAGCTGCCGGTCGCTCTaGATGATCTCCTGCTCCGTGCGCTCAATGAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TMSRSYWSCRSL*MISCSVRSMSS Trigger: GCTGCTCATTGAGCGCACGGAGCAGGAGATCATCCAGAGCGACCGGCAGCTCCAGTATGAGCGGGACATGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CCA 72 bp | TCGTGTGACAGGCTGACCACCATGTCCCGCTCATACTaGAGCTGCCGGTCGCTCTGGATGATCTCCTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SCDRLTTMSRSY*SCRSLWMISCS Trigger: GGAGCAGGAGATCATCCAGAGCGACCGGCAGCTCCAGTATGAGCGGGACATGGTGGTCAGCCTGTCACACGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CCA 72 bp | TCTGTGCCATGTTCTCAGCCTCCCGGCGCTCCTGCATaGCCTCGTACTGGAAGTCCTTCCTGCGCTCTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: SVPCSQPPGAPA*PRTGSPSCALC Trigger: ACACAGAGCGCAGGAAGGACTTCCAGTACGAGGCCATGCAGGAGCGCCGGGAGGCTGAGAACATGGCACAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS TCA 72 bp | CGACATTCCGAACGAAAGGCATCCAGACCTCCCACATaGGCCTGTGGAAGGCATCGGAGGACAGGTCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: RHSERKASRPPT*ACGRHRRTGPG Trigger: GCCAGGACCTGTCCTCCGATGCCTTCCACAGGCTCATGTGGGAGGTCTGGATGCCTTTCGTTCGGAATGTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS TCA 72 bp | CCTCGTACTGGAAGTCCTTCCTGCGCTCTGTGTGGGTaGGGTAGGCAATGTTCTCTCTCGCACCCGGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: PRTGSPSCALCG*GRQCSLSHPAA Trigger: TGCAGCCGGGTGCGAGAGAGAACATTGCCTACCTCACCCACACAGAGCGCAGGAAGGACTTCCAGTACGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS TCA 72 bp | CGCCCTGCACAAACACCACACCCCGGTCAATGTAGATaGCGATGCGGCCGAAGGTGTAGAGCTGCTTGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: RPAQTPHPGQCR*RCGRRCRAACP Trigger: AGGGCAAGCAGCTCTACACCTTCGGCCGCATCGTCATCTACATTGACCGGGGTGTGGTGTTTGTGCAGGGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS GCA 72 bp | TGGATGATCTCCTGCTCCGTGCGCTCAATGAGCAGCTaGAGGTTGTGCTCCAGCTCAGGCAGTGCAAAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: WMISCSVRSMSS*RLCSSSGSAKP Trigger: GGGCTTTGCACTGCCTGAGCTGGAGCACAACCTGCAGCTGCTCATTGAGCGCACGGAGCAGGAGATCATCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS GCA 72 bp | TCATACTGGAGCTGCCGGTCGCTCTGGATGATCTCCTaGTCCGTGCGCTCAATGAGCAGCTGCAGGTTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SYWSCRSLWMIS*SVRSMSSCRLC Trigger: GCACAACCTGCAGCTGCTCATTGAGCGCACGGAGCAGGAGATCATCCAGAGCGACCGGCAGCTCCAGTATGA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS GCA 72 bp | CTTCACGAGCGGGTAGACAATGGCCACAGCGAGGTCTaGGCGGTCCGCCAGGCGGTACTCCTCATAATACTT | + |
|
Preference number: 6 (lower is better) Translates to: LHERVDNGHSEV*AVRQAVLLIIL Trigger: AAGTATTATGAGGAGTACCGCCTGGCGGACCGCGCAGACCTCGCTGTGGCCATTGTCTACCCGCTCGTGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CCA 72 bp | GCTGTCCAGGAAATCCACCATCGGCTCACAGTTCCGTaGCTGCCACTGGGCGACGACATTCCGAACGAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: AVQEIHHRLTVP*LPLGDDIPNER Trigger: CCTTTCGTTCGGAATGTCGTCGCCCAGTGGCAGCCACGGAACTGTGAGCCGATGGTGGATTTCCTGGACAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CAA 72 bp | GTGGCCTCCTCTTTGGTCTGCCAATGGCGCTGCCGGTaGGGGTTGAACTCATTCTGGAGATCCCAGTCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: VASSLVCQWRCR*GLNSFWRSQSV Trigger: CACCGACTGGGATCTCCAGAATGAGTTCAACCCCAACCGGCAGCGCCATTGGCAGACCAAAGAGGAGGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031288.14 ENSMUST00000129528.2 |
||
| CDS CAA 72 bp | GAGTCCTCGGAGTCCGCTTCCTCAGCCGCCCCTTTCTaGAGCCCCGCACTGATGAAGTTGACAGGTGCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: ESSESASSAAPF*SPALMKLTGAE Trigger: TTCTGCACCTGTCAACTTCATCAGTGCGGGGCTCAAGAAAGGGGCGGCTGAGGAAGCGGACTCCGAGGACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CAA 72 bp | CACCCCTTCATCGGGCACGCTGTGCTTGTGGCTGATTaGGCTGTAGCTGTAGTACACCTTCTGCTCCCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: HPFIGHAVLVAD*AVAVVHLLLPA Trigger: GGCCGGGAGCAGAAGGTGTACTACAGCTACAGCCAAATCAGCCACAAGCACAGCGTGCCCGATGAAGGGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CAA 72 bp | GGGTTGATGACAAGCTCTCCCAGGCACATGCCCAGCTaGGGCACGATGTTCCTGAGCATGAAGGCCTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GLMTSSPRHMPS*GTMFLSMKASQ Trigger: CTGGGAGGCCTTCATGCTCAGGAACATCGTGCCCAAGCTGGGCATGTGCCTGGGAGAGCTTGTCATCAACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CAA 90 bp | CAGCAATGGCACCCCTTCATCGGGCACGCTGTGCTTGTGGCTGATTaGGCTGTAGCTGTAGTACACCTTCTGCTCCCGGCCTGTCATGTC | + |
|
Preference number: 6 (lower is better) Translates to: QQWHPFIGHAVLVAD*AVAVVHLLLPACHV Trigger: GACATGACAGGCCGGGAGCAGAAGGTGTACTACAGCTACAGCCAAATCAGCCACAAGCACAGCGTGCCCGATGAAGGGGTGCCATTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS TCA 72 bp | ATGTGCAAGAACCTCGGCCGTCTTCTCCAGCTCGTGTaGCAGGCTGACCACCATGTCCCGCTCATACTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: MCKNLGRLLQLV*QADHHVPLILE Trigger: CTCCAGTATGAGCGGGACATGGTGGTCAGCCTGTCACACGAGCTGGAGAAGACGGCCGAGGTTCTTGCACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CCA 72 bp | AAATCCACCATCGGCTCACAGTTCCGTGGCTGCCACTaGGCGACGACATTCCGAACGAAAGGCATCCAGACC | + |
|
Preference number: 6 (lower is better) Translates to: KSTIGSQFRGCH*ATTFRTKGIQT Trigger: GGTCTGGATGCCTTTCGTTCGGAATGTCGTCGCCCAGTGGCAGCCACGGAACTGTGAGCCGATGGTGGATTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CAA 90 bp | TCCACCTCCTTCTGCAGCTTAGGGAAGATGAGCTGGTCCAGGATATaGTCCAGGATCCACACGGGGATGATGTGTGCCCAGCTGTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: STSFCSLGKMSWSRI*SRIHTGMMCAQLSR Trigger: CCTGGACAGCTGGGCACACATCATCCCCGTGTGGATCCTGGACAATATCCTGGACCAGCTCATCTTCCCTAAGCTGCAGAAGGAGGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS TCA 72 bp | ATGGCACCCCTTCATCGGGCACGCTGTGCTTGTGGCTaGTTTGGCTGTAGCTGTAGTACACCTTCTGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: MAPLHRARCACG*FGCSCSTPSAP Trigger: GGGAGCAGAAGGTGTACTACAGCTACAGCCAAATCAGCCACAAGCACAGCGTGCCCGATGAAGGGGTGCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS TCA 72 bp | GCTGGTCCAGGATATTGTCCAGGATCCACACGGGGATaGTGTGTGCCCAGCTGTCCAGGAAATCCACCATCG | + |
|
Preference number: 6 (lower is better) Translates to: AGPGYCPGSTRG*CVPSCPGNPPS Trigger: CGATGGTGGATTTCCTGGACAGCTGGGCACACATCATCCCCGTGTGGATCCTGGACAATATCCTGGACCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CAA 90 bp | CCCTGCCCTTGGCCTTCAGCTCCTCCACAGTCTTGTAAGAGTACTTaGGCTTCTTCTTGCTCCCGCTGGGGTCTTTCCTCCATTGGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: PCPWPSAPPQSCKST*ASSCSRWGLSSIGS Trigger: TGAGCCAATGGAGGAAAGACCCCAGCGGGAGCAAGAAGAAGCCAAAGTACTCTTACAAGACTGTGGAGGAGCTGAAGGCCAAGGGCAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS TCA 72 bp | CTTGTCCTTGACAGAAGGGTGGGCCAGCACCTGGTCTaGGAACATAGACTTCCAGCCCAGGTACCACTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: LVLDRRVGQHLV*EHRLPAQVPLG Trigger: ACCAAGTGGTACCTGGGCTGGAAGTCTATGTTCTCAGACCAGGTGCTGGCCCACCCTTCTGTCAAGGACAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS GCA 72 bp | CAGGATATTGTCCAGGATCCACACGGGGATGATGTGTaGCCAGCTGTCCAGGAAATCCACCATCGGCTCACA | + |
|
Preference number: 6 (lower is better) Translates to: QDIVQDPHGDDV*PAVQEIHHRLT Trigger: TGTGAGCCGATGGTGGATTTCCTGGACAGCTGGGCACACATCATCCCCGTGTGGATCCTGGACAATATCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CCA 72 bp | TGCCAATGGCGCTGCCGGTTGGGGTTGAACTCATTCTaGAGATCCCAGTCGGTGATCTCAAAGTTCTCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: CQWRCRLGLNSF*RSQSVISKFSL Trigger: GAGGGAGAACTTTGAGATCACCGACTGGGATCTCCAGAATGAGTTCAACCCCAACCGGCAGCGCCATTGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031288.14 ENSMUST00000129528.2 |
||
| CDS CCA 72 bp | TCTCTCTCGCACCCGGCTGCATGTAGGCACCAACATTaGAGGACACAGCCCTGTTCATTATGTCGAGCGCTT | + |
|
Preference number: 6 (lower is better) Translates to: SLSHPAACRHQH*RTQPCSLCRAL Trigger: AAGCGCTCGACATAATGAACAGGGCTGTGTCCTCCAATGTTGGTGCCTACATGCAGCCGGGTGCGAGAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CAA 72 bp | TCCTCTTTGGTCTGCCAATGGCGCTGCCGGTTGGGGTaGAACTCATTCTGGAGATCCCAGTCGGTGATCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SSLVCQWRCRLG*NSFWRSQSVIS Trigger: TGAGATCACCGACTGGGATCTCCAGAATGAGTTCAACCCCAACCGGCAGCGCCATTGGCAGACCAAAGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031288.14 ENSMUST00000129528.2 |
||
| CDS CAA 72 bp | GAGGACACAGCCCTGTTCATTATGTCGAGCGCTTCGTaGAACTTGTCCTTGACAGAAGGGTGGGCCAGCACC | + |
|
Preference number: 6 (lower is better) Translates to: EDTALFIMSSAS*NLSLTEGWAST Trigger: GGTGCTGGCCCACCCTTCTGTCAAGGACAAGTTCAACGAAGCGCTCGACATAATGAACAGGGCTGTGTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CAA 90 bp | CCAACATTGGAGGACACAGCCCTGTTCATTATGTCGAGCGCTTCGTaGAACTTGTCCTTGACAGAAGGGTGGGCCAGCACCTGGTCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: PTLEDTALFIMSSAS*NLSLTEGWASTWSE Trigger: CTCAGACCAGGTGCTGGCCCACCCTTCTGTCAAGGACAAGTTCAACGAAGCGCTCGACATAATGAACAGGGCTGTGTCCTCCAATGTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS GCA 72 bp | CCCTTTCTTGAGCCCCGCACTGATGAAGTTGACAGGTaGAGAATAGTCTCGGGCCCTTTTGCCTCCAAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: PFLEPRTDEVDR*RIVSGPFASKA Trigger: AGCTTTGGAGGCAAAAGGGCCCGAGACTATTCTGCACCTGTCAACTTCATCAGTGCGGGGCTCAAGAAAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CCA 72 bp | AAGTTCTCCCTCTCATCGTCATCGTCATCATCAAGGTaGCCTTCGCCATCCCGGTACAAGTGGGACAGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: KFSLSSSSSSSR*PSPSRYKWDRD Trigger: GTCTCTGTCCCACTTGTACCGGGATGGCGAAGGCCACCTTGATGATGACGATGACGATGAGAGGGAGAACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031288.14 ENSMUST00000129528.2 |
||
| CDS CCA 72 bp | TTGAACTTGTCCTTGACAGAAGGGTGGGCCAGCACCTaGTCTGAGAACATAGACTTCCAGCCCAGGTACCAC | + |
|
Preference number: 6 (lower is better) Translates to: LNLSLTEGWAST*SENIDFQPRYH Trigger: GTGGTACCTGGGCTGGAAGTCTATGTTCTCAGACCAGGTGCTGGCCCACCCTTCTGTCAAGGACAAGTTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CCA 72 bp | TCGAGCGCTTCGTTGAACTTGTCCTTGACAGAAGGGTaGGCCAGCACCTGGTCTGAGAACATAGACTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SSASLNLSLTEG*ASTWSENIDFQ Trigger: CTGGAAGTCTATGTTCTCAGACCAGGTGCTGGCCCACCCTTCTGTCAAGGACAAGTTCAACGAAGCGCTCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CAA 72 bp | TGGCCTTCAGCTCCTCCACAGTCTTGTAAGAGTACTTaGGCTTCTTCTTGCTCCCGCTGGGGTCTTTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: WPSAPPQSCKST*ASSCSRWGLSS Trigger: GGAGGAAAGACCCCAGCGGGAGCAAGAAGAAGCCAAAGTACTCTTACAAGACTGTGGAGGAGCTGAAGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CAA 72 bp | TTCTGCAGCTTAGGGAAGATGAGCTGGTCCAGGATATaGTCCAGGATCCACACGGGGATGATGTGTGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: FCSLGKMSWSRI*SRIHTGMMCAQ Trigger: CTGGGCACACATCATCCCCGTGTGGATCCTGGACAATATCCTGGACCAGCTCATCTTCCCTAAGCTGCAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CAA 72 bp | ACAGCCCTGTTCATTATGTCGAGCGCTTCGTTGAACTaGTCCTTGACAGAAGGGTGGGCCAGCACCTGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: TALFIMSSASLN*SLTEGWASTWS Trigger: AGACCAGGTGCTGGCCCACCCTTCTGTCAAGGACAAGTTCAACGAAGCGCTCGACATAATGAACAGGGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS TCA 72 bp | TCCCTTTCGTGTGTCTCTCCCAGCTGCCAAAGTCCATaGAGGACTTGGTTCCTCCTGAAAAGCCTTTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SLSCVSPSCQSP*RTWFLLKSLSG Trigger: GCCAGAAAGGCTTTTCAGGAGGAACCAAGTCCTTCATGGACTTTGGCAGCTGGGAGAGACACACGAAAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS GCA 72 bp | CCTCCACAGTCTTGTAAGAGTACTTTGGCTTCTTCTTaGTCCCGCTGGGGTCTTTCCTCCATTGGCTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: PPQSCKSTLASS*SRWGLSSIGSA Trigger: AGCTGAGCCAATGGAGGAAAGACCCCAGCGGGAGCAAGAAGAAGCCAAAGTACTCTTACAAGACTGTGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CAA 72 bp | CTGTTCATTATGTCGAGCGCTTCGTTGAACTTGTCCTaGACAGAAGGGTGGGCCAGCACCTGGTCTGAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LFIMSSASLNLS*TEGWASTWSEN Trigger: GTTCTCAGACCAGGTGCTGGCCCACCCTTCTGTCAAGGACAAGTTCAACGAAGCGCTCGACATAATGAACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CAA 72 bp | TCGTGCCGCTTGCCGATGACAGGCATGAACACAATGTaGTGCTCCTCTGCCTTAGTCTCGATGAGGTCCTTA | + |
|
Preference number: 6 (lower is better) Translates to: SCRLPMTGMNTM*CSSALVSMRSL Trigger: TAAGGACCTCATCGAGACTAAGGCAGAGGAGCACAACATTGTGTTCATGCCTGTCATCGGCAAGCGGCACGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CAA 90 bp | GACACAGCCCTGTTCATTATGTCGAGCGCTTCGTTGAACTTGTCCTaGACAGAAGGGTGGGCCAGCACCTGGTCTGAGAACATAGACTTC | + |
|
Preference number: 6 (lower is better) Translates to: DTALFIMSSASLNLS*TEGWASTWSENIDF Trigger: GAAGTCTATGTTCTCAGACCAGGTGCTGGCCCACCCTTCTGTCAAGGACAAGTTCAACGAAGCGCTCGACATAATGAACAGGGCTGTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CAA 90 bp | TTGGAGGACACAGCCCTGTTCATTATGTCGAGCGCTTCGTTGAACTaGTCCTTGACAGAAGGGTGGGCCAGCACCTGGTCTGAGAACATA | + |
|
Preference number: 6 (lower is better) Translates to: LEDTALFIMSSASLN*SLTEGWASTWSENI Trigger: TATGTTCTCAGACCAGGTGCTGGCCCACCCTTCTGTCAAGGACAAGTTCAACGAAGCGCTCGACATAATGAACAGGGCTGTGTCCTCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CAA 90 bp | TGCTTGCCCTCGTGCCGCTTGCCGATGACAGGCATGAACACAATGTaGTGCTCCTCTGCCTTAGTCTCGATGAGGTCCTTAAAGTTCATG | + |
|
Preference number: 6 (lower is better) Translates to: CLPSCRLPMTGMNTM*CSSALVSMRSLKFM Trigger: CATGAACTTTAAGGACCTCATCGAGACTAAGGCAGAGGAGCACAACATTGTGTTCATGCCTGTCATCGGCAAGCGGCACGAGGGCAAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS TCA 72 bp | CCAGCTGCCAAAGTCCATGAAGGACTTGGTTCCTCCTaGAAAGCCTTTCTGGCTGGGCTTAAAATTGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: PAAKVHEGLGSS*KAFLAGLKIAT Trigger: GGTGGCAATTTTAAGCCCAGCCAGAAAGGCTTTTCAGGAGGAACCAAGTCCTTCATGGACTTTGGCAGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS GCA 72 bp | TGCCGCTTGCCGATGACAGGCATGAACACAATGTTGTaGTCCTCTGCCTTAGTCTCGATGAGGTCCTTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: CRLPMTGMNTML*SSALVSMRSLK Trigger: CTTTAAGGACCTCATCGAGACTAAGGCAGAGGAGCACAACATTGTGTTCATGCCTGTCATCGGCAAGCGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CAA 90 bp | ATCCCTTTCGTGTGTCTCTCCCAGCTGCCAAAGTCCATGAAGGACTaGGTTCCTCCTGAAAAGCCTTTCTGGCTGGGCTTAAAATTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: IPFVCLSQLPKSMKD*VPPEKPFWLGLKLP Trigger: TGGCAATTTTAAGCCCAGCCAGAAAGGCTTTTCAGGAGGAACCAAGTCCTTCATGGACTTTGGCAGCTGGGAGAGACACACGAAAGGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS GCA 72 bp | GCCGATGACAGGCATGAACACAATGTTGTGCTCCTCTaGCTTAGTCTCGATGAGGTCCTTAAAGTTCATGGG | + |
|
Preference number: 6 (lower is better) Translates to: ADDRHEHNVVLL*LSLDEVLKVHG Trigger: CCCATGAACTTTAAGGACCTCATCGAGACTAAGGCAGAGGAGCACAACATTGTGTTCATGCCTGTCATCGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CCA 72 bp | TCTTGTAAGAGTACTTTGGCTTCTTCTTGCTCCCGCTaGGGTCTTTCCTCCATTGGCTCAGCTCCTTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: SCKSTLASSCSR*GLSSIGSAPSE Trigger: TTCAGAAGGAGCTGAGCCAATGGAGGAAAGACCCCAGCGGGAGCAAGAAGAAGCCAAAGTACTCTTACAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS GCA 72 bp | AACTTCTTTGGTCCTAAATCCTTCGGGAAGTCCTCCTaGTTAACAGGCTTCTCTTCAGCATCAGAGTCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: NFFGPKSFGKSS*LTGFSSASESS Trigger: CGAGGACTCTGATGCTGAAGAGAAGCCTGTTAAGCAGGAGGACTTCCCGAAGGATTTAGGACCAAAGAAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CAA 90 bp | AAGGACTTGGTTCCTCCTGAAAAGCCTTTCTGGCTGGGCTTAAAATaGCCACCCGTCTTTAACTTCTTTGGTCCTAAATCCTTCGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: KDLVPPEKPFWLGLK*PPVFNFFGPKSFGK Trigger: CTTCCCGAAGGATTTAGGACCAAAGAAGTTAAAGACGGGTGGCAATTTTAAGCCCAGCCAGAAAGGCTTTTCAGGAGGAACCAAGTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CCA 72 bp | TCCATGAAGGACTTGGTTCCTCCTGAAAAGCCTTTCTaGCTGGGCTTAAAATTGCCACCCGTCTTTAACTTC | + |
|
Preference number: 6 (lower is better) Translates to: SMKDLVPPEKPF*LGLKLPPVFNF Trigger: GAAGTTAAAGACGGGTGGCAATTTTAAGCCCAGCCAGAAAGGCTTTTCAGGAGGAACCAAGTCCTTCATGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||
| CDS CAA 72 bp | GTTCCTCCTGAAAAGCCTTTCTGGCTGGGCTTAAAATaGCCACCCGTCTTTAACTTCTTTGGTCCTAAATCC | + |
|
Preference number: 6 (lower is better) Translates to: VPPEKPFWLGLK*PPVFNFFGPKS Trigger: GGATTTAGGACCAAAGAAGTTAAAGACGGGTGGCAATTTTAAGCCCAGCCAGAAAGGCTTTTCAGGAGGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031288.14 |
||