Pregenerated sensors for TFEC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029553Ensembl transcript IDs: ENSMUST00000031533.11, ENSMUST00000201406.2, ENSMUST00000202997.2
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGCAACAGCCTCCTAAGTTCCTCTCAGGATGGGTCTGCTGCTTGGTaGTGTGGGTACCAACATCAGCTGTGCCGAGTGAAGCCAGGATTG | + |
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Preference number: 1 (lower is better) Translates to: SNSLLSSSQDGSAAW*CGYQHQLCRVKPGL Trigger: CAATCCTGGCTTCACTCGGCACAGCTGATGTTGGTACCCACATCACCAAGCAGCAGACCCATCCTGAGAGGAACTTAGGAGGCTGTTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202997.2 |
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| 3UTR CCA 90 bp | CAGCCTCCTAAGTTCCTCTCAGGATGGGTCTGCTGCTTGGTGATGTaGGTACCAACATCAGCTGTGCCGAGTGAAGCCAGGATTGGTAGA | + |
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Preference number: 1 (lower is better) Translates to: QPPKFLSGWVCCLVM*VPTSAVPSEARIGR Trigger: TCTACCAATCCTGGCTTCACTCGGCACAGCTGATGTTGGTACCCACATCACCAAGCAGCAGACCCATCCTGAGAGGAACTTAGGAGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202997.2 |
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| 3UTR GCA 90 bp | AGTTGTAAGCAACAGCCTCCTAAGTTCCTCTCAGGATGGGTCTGCTaGTTGGTGATGTGGGTACCAACATCAGCTGTGCCGAGTGAAGCC | + |
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Preference number: 1 (lower is better) Translates to: SCKQQPPKFLSGWVC*LVMWVPTSAVPSEA Trigger: GGCTTCACTCGGCACAGCTGATGTTGGTACCCACATCACCAAGCAGCAGACCCATCCTGAGAGGAACTTAGGAGGCTGTTGCTTACAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202997.2 |
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| 3UTR CCA 90 bp | GTTGGAGTCAGTTGTAAGCAACAGCCTCCTAAGTTCCTCTCAGGATaGGTCTGCTGCTTGGTGATGTGGGTACCAACATCAGCTGTGCCG | + |
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Preference number: 1 (lower is better) Translates to: VGVSCKQQPPKFLSG*VCCLVMWVPTSAVP Trigger: CGGCACAGCTGATGTTGGTACCCACATCACCAAGCAGCAGACCCATCCTGAGAGGAACTTAGGAGGCTGTTGCTTACAACTGACTCCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202997.2 |
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| 3UTR GCA 90 bp | AGTCTTTTGAAGGACCTTAGCTCCAGCAATATCCTAGCATGTCACTaGTCTGAAAGTATCAACACTAGAGCCGTTATCAAGCTGGACCAT | + |
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Preference number: 1 (lower is better) Translates to: SLLKDLSSSNILACH*SESINTRAVIKLDH Trigger: ATGGTCCAGCTTGATAACGGCTCTAGTGTTGATACTTTCAGAGCAGTGACATGCTAGGATATTGCTGGAGCTAAGGTCCTTCAAAAGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031533.11 ENSMUST00000202997.2 |
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| 3UTR TCA 90 bp | ATGGTGCACTTGGTTGCATTGTTTATGTGCCTCCGGGGTGTGTGTTaGGGTCATGTCATGTGTGAATTAAATGAACGTTATTTTCTGCAT | + |
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Preference number: 1 (lower is better) Translates to: MVHLVALFMCLRGVC*GHVMCELNERYFLH Trigger: ATGCAGAAAATAACGTTCATTTAATTCACACATGACATGACCTCAACACACACCCCGGAGGCACATAAACAATGCAACCAAGTGCACCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201406.2 |
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| 3UTR CAA 90 bp | TGTAAGCAACAGCCTCCTAAGTTCCTCTCAGGATGGGTCTGCTGCTaGGTGATGTGGGTACCAACATCAGCTGTGCCGAGTGAAGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: CKQQPPKFLSGWVCC*VMWVPTSAVPSEAR Trigger: CCTGGCTTCACTCGGCACAGCTGATGTTGGTACCCACATCACCAAGCAGCAGACCCATCCTGAGAGGAACTTAGGAGGCTGTTGCTTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202997.2 |
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| 3UTR CAA 90 bp | AACTCATCACCATCCTCTGAGCTAAGGCTGCTTCGGCTGCTAGCTTaGGAAACTGCAGGGGAAATGGCAGAGAGTAGTGGGTCCGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: NSSPSSELRLLRLLA*ETAGEMAESSGSVP Trigger: TGGGACGGACCCACTACTCTCTGCCATTTCCCCTGCAGTTTCCAAAGCTAGCAGCCGAAGCAGCCTTAGCTCAGAGGATGGTGATGAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202997.2 |
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| 3UTR-3UTR TCA 90 bp | GAGCTAAGGCTGCTTCGGCTGCTAGCTTTGGAAACTGCAGGGGAAATGGCAGAGAAGGCAGATCACAATTaGGTAGCACCAGCAGAGAGT | + |
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Preference number: 2 (lower is better) Translates to: ELRLLRLLALETAGEMAEKADHN*VAPAES Trigger: ACTCTCTGCTGGTGCTACTCAATTGTGATCTGCCTT...CTCTGCCATTTCCCCTGCAGTTTCCAAAGCTAGCAGCCGAAGCAGCCTTAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202997.2 |
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| 3UTR-3UTR GCA 90 bp | GAGCTAAGGCTGCTTCGGCTGCTAGCTTTGGAAACTGCAGGGGAAATGGCAGAGAGGGGAGTGGGATGTTaGAGTCTTTTGAAGGACCTT | + |
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Preference number: 2 (lower is better) Translates to: ELRLLRLLALETAGEMAERGVGC*SLLKDL Trigger: AAGGTCCTTCAAAAGACTGCAACATCCCACTCCCCT...CTCTGCCATTTCCCCTGCAGTTTCCAAAGCTAGCAGCCGAAGCAGCCTTAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000202997.2 |
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| 3UTR CAA 90 bp | AGAAAGCCACAGCTTGCTCATAGAACTCCGGGCTTGTCCCCTGAGTaGGAGTCAGTTGTAAGCAACAGCCTCCTAAGTTCCTCTCAGGAT | + |
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Preference number: 2 (lower is better) Translates to: RKPQLAHRTPGLSPE*ESVVSNSLLSSSQD Trigger: ATCCTGAGAGGAACTTAGGAGGCTGTTGCTTACAACTGACTCCAACTCAGGGGACAAGCCCGGAGTTCTATGAGCAAGCTGTGGCTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202997.2 |
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| 3UTR CAA 90 bp | CAGGATTTGGACGTGAGTGAGAGGGGAGTGGGATGTTGCAGTCTTTaGAAGGACCTTAGCTCCAGCAATATCCTAGCATGTCACTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: QDLDVSERGVGCCSL*KDLSSSNILACHCS Trigger: AGAGCAGTGACATGCTAGGATATTGCTGGAGCTAAGGTCCTTCAAAAGACTGCAACATCCCACTCCCCTCTCACTCACGTCCAAATCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031533.11 ENSMUST00000202997.2 |
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| 3UTR-3UTR GCA 90 bp | GGGAAATGGCAGAGAGTAGTGGGTCCGTCCCAAAGGGGCATATTGTATCACTTATACCAACATCAGCTGTaGCGAGTGAAGCCAGGATTG | + |
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Preference number: 2 (lower is better) Translates to: GKWQRVVGPSQRGILYHLYQHQL*RVKPGL Trigger: CAATCCTGGCTTCACTCGGCACAGCTGATGTTGGTA...TAAGTGATACAATATGCCCCTTTGGGACGGACCCACTACTCTCTGCCATTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202997.2 |
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| 3UTR-3UTR CCA 90 bp | GGGAAATGGCAGAGAGTAGTGGGTCCGTCCCAAAGGGGCATATTGTATCACTTATGCTGCTTGGTGATGTaGGTACCAACATCAGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: GKWQRVVGPSQRGILYHLCCLVM*VPTSAV Trigger: CACAGCTGATGTTGGTACCCACATCACCAAGCAGCA...TAAGTGATACAATATGCCCCTTTGGGACGGACCCACTACTCTCTGCCATTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202997.2 |
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| 3UTR-3UTR TCA 90 bp | AATTCTTCCAGCACTTCTAAACACACGCCACCCCTCCCCCTCGGCCAATATAATAAGGCAGATCACAATTaGGTAGCACCAGCAGAGAGT | + |
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Preference number: 2 (lower is better) Translates to: NSSSTSKHTPPLPLGQYNKADHN*VAPAES Trigger: ACTCTCTGCTGGTGCTACTCAATTGTGATCTGCCTT...ATTATATTGGCCGAGGGGGAGGGGTGGCGTGTGTTTAGAAGTGCTGGAAGAATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031533.11 ENSMUST00000202997.2 |
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| 3UTR CAA 90 bp | CAGGGGAAATGGCAGAGAGTAGTGGGTCCGTCCCAAAGGGGCATATaGTATCACTTAGTAGCATGCCATCCAATCTTTGTTCCTCTTTCA | + |
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Preference number: 2 (lower is better) Translates to: QGKWQRVVGPSQRGI*YHLVACHPIFVPLS Trigger: TGAAAGAGGAACAAAGATTGGATGGCATGCTACTAAGTGATACAATATGCCCCTTTGGGACGGACCCACTACTCTCTGCCATTTCCCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202997.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGCACTTCTAAACACACGCCACCCCTCCCCCTCGGCCAATATAATTCCTTTCCTCGGTAGACAACTGTaGTCTTCAATGATTCTTTCA | + |
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Preference number: 2 (lower is better) Translates to: PALLNTRHPSPSANIIPFLGRQL*SSMILS Trigger: TGAAAGAATCATTGAAGATCACAGTTGTCTACCGAG...GAAAGGAATTATATTGGCCGAGGGGGAGGGGTGGCGTGTGTTTAGAAGTGCTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031533.11 ENSMUST00000202997.2 |
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| 3UTR-3UTR TCA 90 bp | GGGGAAATGGCAGAGAGTAGTGGGTCCGTCCCAAAGGGGCATATTGTATCACTTTTTCAGAGAGTTAAGTaGAAGCAAGGTATGAAAGGC | + |
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Preference number: 2 (lower is better) Translates to: GEMAESSGSVPKGHIVSLFQRVK*KQGMKG Trigger: GCCTTTCATACCTTGCTTTCACTTAACTCTCTGAAA...AAGTGATACAATATGCCCCTTTGGGACGGACCCACTACTCTCTGCCATTTCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000202997.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGCACTTCTAAACACACGCCACCCCTCCCCCTCGGCCAATATAATTCCTTTCGATAAATCTGTGAAGTaGGACAATGGATCAGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: PALLNTRHPSPSANIIPFDKSVK*DNGSEK Trigger: TTTCTCTGATCCATTGTCTCACTTCACAGATTTATC...GAAAGGAATTATATTGGCCGAGGGGGAGGGGTGGCGTGTGTTTAGAAGTGCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000202997.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGCACTTCTAAACACACGCCACCCCTCCCCCTCGGCCAATATAATTCCTTTCTATCACTTAGTAGCATaGCATCCAATCTTTGTTCCT | + |
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Preference number: 2 (lower is better) Translates to: PALLNTRHPSPSANIIPFYHLVA*HPIFVP Trigger: AGGAACAAAGATTGGATGGCATGCTACTAAGTGATA...GAAAGGAATTATATTGGCCGAGGGGGAGGGGTGGCGTGTGTTTAGAAGTGCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000202997.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGGTTGCATTGTTTATGTGCCTCCGGGGTGTGTGTTGAGGTCATGTCATGTGTCTGCATTGGGTAGTTaGTTCTCATTTGTTCTACAC | + |
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Preference number: 2 (lower is better) Translates to: LGCIVYVPPGCVLRSCHVSALGS*FSFVLH Trigger: GTGTAGAACAAATGAGAACCAACTACCCAATGCAGA...CACATGACATGACCTCAACACACACCCCGGAGGCACATAAACAATGCAACCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201406.2 |
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| 3UTR-3UTR TCA 90 bp | GTATGTCCACCCGACAAAGGAAAAGAAATTATCACCAAATTTGTTAGTCGTGAAGAGTTGCTTCCTGGTTaGTGTCTTGAGCCTGTTTGC | + |
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Preference number: 2 (lower is better) Translates to: VCPPDKGKEIITKFVSREELLPG*CLEPVC Trigger: GCAAACAGGCTCAAGACATCAACCAGGAAGCAACTC...TTCACGACTAACAAATTTGGTGATAATTTCTTTTCCTTTGTCGGGTGGACATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031533.11 ENSMUST00000202997.2 |
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| 3UTR-3UTR TCA 90 bp | GGGCATATTGTATCACTTAGTAGCATGCCATCCAATCTTTGTTCCTCTTTCAAACTTTTTGTAGCCACTTaGTGTAGTCCACTGATGCCT | + |
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Preference number: 2 (lower is better) Translates to: GHIVSLSSMPSNLCSSFKLFVAT*CSPLMP Trigger: AGGCATCAGTGGACTACATCAAGTGGCTACAAAAAG...TTTGAAAGAGGAACAAAGATTGGATGGCATGCTACTAAGTGATACAATATGCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000202997.2 |
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| 3UTR-3UTR TCA 90 bp | GTATGTCCACCCGACAAAGGAAAAGAAATTATCACCAAATTTGTTAGTCGTGAATTTCAGAGAGTTAAGTaGAAGCAAGGTATGAAAGGC | + |
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Preference number: 2 (lower is better) Translates to: VCPPDKGKEIITKFVSREFQRVK*KQGMKG Trigger: GCCTTTCATACCTTGCTTTCACTTAACTCTCTGAAA...TTCACGACTAACAAATTTGGTGATAATTTCTTTTCCTTTGTCGGGTGGACATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031533.11 ENSMUST00000202997.2 |
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| 3UTR-3UTR CAA 90 bp | GAGCTAAGGCTGCTTCGGCTGCTAGCTTTGGAAACTGCAGGGGAAATGGCAGAGCGAGTGAAGCCAGGATaGGTAGACCATGAGCACGTG | + |
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Preference number: 3 (lower is better) Translates to: ELRLLRLLALETAGEMAERVKPG*VDHEHV Trigger: CACGTGCTCATGGTCTACCAATCCTGGCTTCACTCG...CTCTGCCATTTCCCCTGCAGTTTCCAAAGCTAGCAGCCGAAGCAGCCTTAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202997.2 |
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| 3UTR GCA 72 bp | CAACAGCCTCCTAAGTTCCTCTCAGGATGGGTCTGCTaGTTGGTGATGTGGGTACCAACATCAGCTGTGCCG | + |
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Preference number: 3 (lower is better) Translates to: QQPPKFLSGWVC*LVMWVPTSAVP Trigger: CGGCACAGCTGATGTTGGTACCCACATCACCAAGCAGCAGACCCATCCTGAGAGGAACTTAGGAGGCTGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202997.2 |
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| 3UTR-3UTR CAA 90 bp | CCAGCACTTCTAAACACACGCCACCCCTCCCCCTCGGCCAATATAATTCCTTTCGAGGGGAGTGGGATGTaGCAGTCTTTTGAAGGACCT | + |
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Preference number: 3 (lower is better) Translates to: PALLNTRHPSPSANIIPFEGSGM*QSFEGP Trigger: AGGTCCTTCAAAAGACTGCAACATCCCACTCCCCTC...GAAAGGAATTATATTGGCCGAGGGGGAGGGGTGGCGTGTGTTTAGAAGTGCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000031533.11 ENSMUST00000202997.2 |
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| 3UTR TCA 72 bp | GAGCCTGTTTGCGGCTTACAACTCATCACCATCCTCTaGGCTAAGGCTGCTTCGGCTGCTAGCTTTGGAAAC | + |
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Preference number: 3 (lower is better) Translates to: EPVCGLQLITIL*AKAASAASFGN Trigger: GTTTCCAAAGCTAGCAGCCGAAGCAGCCTTAGCTCAGAGGATGGTGATGAGTTGTAAGCCGCAAACAGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202997.2 |
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| 3UTR GCA 72 bp | AAGCAACAGCCTCCTAAGTTCCTCTCAGGATGGGTCTaGTGCTTGGTGATGTGGGTACCAACATCAGCTGTG | + |
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Preference number: 3 (lower is better) Translates to: KQQPPKFLSGWV*CLVMWVPTSAV Trigger: CACAGCTGATGTTGGTACCCACATCACCAAGCAGCAGACCCATCCTGAGAGGAACTTAGGAGGCTGTTGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202997.2 |
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| 3UTR-3UTR CAA 90 bp | GGGGAAATGGCAGAGAGTAGTGGGTCCGTCCCAAAGGGGCATATTGTATCACTTGGCTTGTCCCCTGAGTaGGAGTCAGTTGTAAGCAAC | + |
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Preference number: 3 (lower is better) Translates to: GEMAESSGSVPKGHIVSLGLSPE*ESVVSN Trigger: GTTGCTTACAACTGACTCCAACTCAGGGGACAAGCC...AAGTGATACAATATGCCCCTTTGGGACGGACCCACTACTCTCTGCCATTTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000202997.2 |
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| 3UTR CCA 72 bp | AGTTGTAAGCAACAGCCTCCTAAGTTCCTCTCAGGATaGGTCTGCTGCTTGGTGATGTGGGTACCAACATCA | + |
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Preference number: 3 (lower is better) Translates to: SCKQQPPKFLSG*VCCLVMWVPTS Trigger: TGATGTTGGTACCCACATCACCAAGCAGCAGACCCATCCTGAGAGGAACTTAGGAGGCTGTTGCTTACAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202997.2 |
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| 3UTR GCA 72 bp | CAAACTCATCTTACAGAAACATATGGTGCACTTGGTTaGATTGTTTATGTGCCTCCGGGGTGTGTGTTGAGG | + |
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Preference number: 3 (lower is better) Translates to: QTHLTETYGALG*IVYVPPGCVLR Trigger: CCTCAACACACACCCCGGAGGCACATAAACAATGCAACCAAGTGCACCATATGTTTCTGTAAGATGAGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201406.2 |
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| 3UTR GCA 72 bp | AAGGACCTTAGCTCCAGCAATATCCTAGCATGTCACTaGTCTGAAAGTATCAACACTAGAGCCGTTATCAAG | + |
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Preference number: 3 (lower is better) Translates to: KDLSSSNILACH*SESINTRAVIK Trigger: CTTGATAACGGCTCTAGTGTTGATACTTTCAGAGCAGTGACATGCTAGGATATTGCTGGAGCTAAGGTCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031533.11 ENSMUST00000202997.2 |
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| 3UTR CCA 72 bp | TGTTCAAACTCATCTTACAGAAACATATGGTGCACTTaGTTGCATTGTTTATGTGCCTCCGGGGTGTGTGTT | + |
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Preference number: 3 (lower is better) Translates to: CSNSSYRNIWCT*LHCLCASGVCV Trigger: AACACACACCCCGGAGGCACATAAACAATGCAACCAAGTGCACCATATGTTTCTGTAAGATGAGTTTGAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201406.2 |
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| 3UTR-3UTR CAA 90 bp | GACAAGGATTCAACCATACATAGTATGTCCACCCGACAAAGGAAAAGAAATTATGGATGTTGCAGTCTTTaGAAGGACCTTAGCTCCAGC | + |
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Preference number: 3 (lower is better) Translates to: DKDSTIHSMSTRQRKRNYGCCSL*KDLSSS Trigger: GCTGGAGCTAAGGTCCTTCAAAAGACTGCAACATCC...ATAATTTCTTTTCCTTTGTCGGGTGGACATACTATGTATGGTTGAATCCTTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031533.11 ENSMUST00000202997.2 |
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| 3UTR TCA 72 bp | TTGGTTGCATTGTTTATGTGCCTCCGGGGTGTGTGTTaGGGTCATGTCATGTGTGAATTAAATGAACGTTAT | + |
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Preference number: 3 (lower is better) Translates to: LVALFMCLRGVC*GHVMCELNERY Trigger: ATAACGTTCATTTAATTCACACATGACATGACCTCAACACACACCCCGGAGGCACATAAACAATGCAACCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201406.2 |
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| 3UTR TCA 72 bp | GGAAATCTGAACTCGGTAGACAACTGTGATCTTCAATaGTTCTTTCACATCATGTTTCTTCTTCCCATGAAT | + |
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Preference number: 3 (lower is better) Translates to: GNLNSVDNCDLQ*FFHIMFLLPMN Trigger: ATTCATGGGAAGAAGAAACATGATGTGAAAGAATCATTGAAGATCACAGTTGTCTACCGAGTTCAGATTTCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031533.11 ENSMUST00000202997.2 |
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| CDS-3UTR GCA 90 bp | GAGCTAAGGCTGCTTCGGCTGCTAGCTTTGGAAACTGCAGGGGAAATGGCAGAGAGGCATGCAGCTGGCTaGTGGAGGCTGCGCTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: ELRLLRLLALETAGEMAERHAAG*WRLRSL Trigger: AAGAGAGCGCAGCCTCCAGCAGCCAGCTGCATGCCT...CTCTGCCATTTCCCCTGCAGTTTCCAAAGCTAGCAGCCGAAGCAGCCTTAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202997.2 |
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| CDS-3UTR GCA 90 bp | CCAGCACTTCTAAACACACGCCACCCCTCCCCCTCGGCCAATATAATTCCTTTCAGGCATGCAGCTGGCTaGTGGAGGCTGCGCTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: PALLNTRHPSPSANIIPFRHAAG*WRLRSL Trigger: AAGAGAGCGCAGCCTCCAGCAGCCAGCTGCATGCCT...GAAAGGAATTATATTGGCCGAGGGGGAGGGGTGGCGTGTGTTTAGAAGTGCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031533.11 ENSMUST00000202997.2 |
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| CDS-3UTR GCA 90 bp | TCCAGCACTTCTAAACACACGCCACCCCTCCCCCTCGGCCAATATAATTCCTTTCTGGCTGCTGGAGGCTaGGCTCTCTTGAGAGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: SSTSKHTPPLPLGQYNSFLAAGG*ALLRVW Trigger: CCAGACTCTCAAGAGAGCGCAGCCTCCAGCAGCCAG...AAAGGAATTATATTGGCCGAGGGGGAGGGGTGGCGTGTGTTTAGAAGTGCTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031533.11 ENSMUST00000202997.2 |
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| CDS-3UTR GCA 90 bp | TCTTCCAGCACTTCTAAACACACGCCACCCCTCCCCCTCGGCCAATATAATTCCCATGGGTTCATGCTCTaGCAGAGGCATGCAGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: SSSTSKHTPPLPLGQYNSHGFML*QRHAAG Trigger: GCCAGCTGCATGCCTCTGGCAGAGCATGAACCCATG...GGAATTATATTGGCCGAGGGGGAGGGGTGGCGTGTGTTTAGAAGTGCTGGAAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031533.11 ENSMUST00000202997.2 |
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| 3UTR CAA 72 bp | CAGCCTCCTAAGTTCCTCTCAGGATGGGTCTGCTGCTaGGTGATGTGGGTACCAACATCAGCTGTGCCGAGT | + |
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Preference number: 4 (lower is better) Translates to: QPPKFLSGWVCC*VMWVPTSAVPS Trigger: ACTCGGCACAGCTGATGTTGGTACCCACATCACCAAGCAGCAGACCCATCCTGAGAGGAACTTAGGAGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202997.2 |
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| 3UTR CAA 72 bp | CCATCCTCTGAGCTAAGGCTGCTTCGGCTGCTAGCTTaGGAAACTGCAGGGGAAATGGCAGAGAGTAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: PSSELRLLRLLA*ETAGEMAESSG Trigger: CCCACTACTCTCTGCCATTTCCCCTGCAGTTTCCAAAGCTAGCAGCCGAAGCAGCCTTAGCTCAGAGGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202997.2 |
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| CDS-3UTR GCA 90 bp | TCCAGCACTTCTAAACACACGCCACCCCTCCCCCTCGGCCAATATAATTCCTTTGGGCTCATGGGTTCATaGTCTGCCAGAGGCATGCAG | + |
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Preference number: 4 (lower is better) Translates to: SSTSKHTPPLPLGQYNSFGLMGS*SARGMQ Trigger: CTGCATGCCTCTGGCAGAGCATGAACCCATGAGCCC...AAAGGAATTATATTGGCCGAGGGGGAGGGGTGGCGTGTGTTTAGAAGTGCTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031533.11 ENSMUST00000202997.2 |
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| CDS-3UTR GCA 90 bp | TTGGAGTCAGTTGTAAGCAACAGCCTCCTAAGTTCCTCTCAGGATGGGTCTGCTGGGCTCATGGGTTCATaGTCTGCCAGAGGCATGCAG | + |
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Preference number: 4 (lower is better) Translates to: LESVVSNSLLSSSQDGSAGLMGS*SARGMQ Trigger: CTGCATGCCTCTGGCAGAGCATGAACCCATGAGCCC...AGCAGACCCATCCTGAGAGGAACTTAGGAGGCTGTTGCTTACAACTGACTCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202997.2 |
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| 3UTR CAA 72 bp | CAGCTTGCTCATAGAACTCCGGGCTTGTCCCCTGAGTaGGAGTCAGTTGTAAGCAACAGCCTCCTAAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: QLAHRTPGLSPE*ESVVSNSLLSS Trigger: GGAACTTAGGAGGCTGTTGCTTACAACTGACTCCAACTCAGGGGACAAGCCCGGAGTTCTATGAGCAAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202997.2 |
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| CDS-3UTR GCA 90 bp | CCAGCACTTCTAAACACACGCCACCCCTCCCCCTCGGCCAATATAATTCCTTTCTGTGAATGGGTTTCCTaGACAGCCAGCATCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PALLNTRHPSPSANIIPFCEWVS*TASITV Trigger: GACAGTGATGCTGGCTGTGCAGGAAACCCATTCACA...GAAAGGAATTATATTGGCCGAGGGGGAGGGGTGGCGTGTGTTTAGAAGTGCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031533.11 ENSMUST00000202997.2 |
||
| CDS-3UTR GCA 90 bp | TCTTCCAGCACTTCTAAACACACGCCACCCCTCCCCCTCGGCCAATATAATTCCTACCAACATCAGCTGTaGCGAGTGAAGCCAGGATTG | + |
|
Preference number: 4 (lower is better) Translates to: SSSTSKHTPPLPLGQYNSYQHQL*RVKPGL Trigger: CAATCCTGGCTTCACTCGGCACAGCTGATGTTGGTA...GGAATTATATTGGCCGAGGGGGAGGGGTGGCGTGTGTTTAGAAGTGCTGGAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031533.11 |
||
| CDS-3UTR CCA 90 bp | ATTGTATCACTTAGTAGCATGCCATCCAATCTTTGTTCCTCTTTCAAAGCGGCACCAGAGGCATGCAGCTaGCTGCTGGAGGCTGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: IVSLSSMPSNLCSSFKAAPEACS*LLEAAL Trigger: GAGCGCAGCCTCCAGCAGCCAGCTGCATGCCTCTGG...TGCCGCTTTGAAAGAGGAACAAAGATTGGATGGCATGCTACTAAGTGATACAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202997.2 |
||
| 3UTR CAA 72 bp | TGTGAAGTGAGACAATGGATCAGAGAAAGCCACAGCTaGCTCATAGAACTCCGGGCTTGTCCCCTGAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CEVRQWIRESHS*LIELRACPLSW Trigger: CCAACTCAGGGGACAAGCCCGGAGTTCTATGAGCAAGCTGTGGCTTTCTCTGATCCATTGTCTCACTTCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202997.2 |
||
| 3UTR CAA 72 bp | GTAGCACCAGCAGAGAGTTGCTTCCTGGTTGATGTCTaGAGCCTGTTTGCGGCTTACAACTCATCACCATCC | + |
|
Preference number: 4 (lower is better) Translates to: VAPAESCFLVDV*SLFAAYNSSPS Trigger: GGATGGTGATGAGTTGTAAGCCGCAAACAGGCTCAAGACATCAACCAGGAAGCAACTCTCTGCTGGTGCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202997.2 |
||
| CDS-3UTR GCA 90 bp | AATTCTTCCAGCACTTCTAAACACACGCCACCCCTCCCCCTCGGCCAATATAATGCTAGCTTTGGAAACTaGAGGGGAAATGGCAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: NSSSTSKHTPPLPLGQYNASFGN*RGNGRE Trigger: CTCTCTGCCATTTCCCCTGCAGTTTCCAAAGCTAGC...ATTATATTGGCCGAGGGGGAGGGGTGGCGTGTGTTTAGAAGTGCTGGAAGAATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031533.11 |
||
| CDS-3UTR CCA 90 bp | GGGAAATGGCAGAGAGTAGTGGGTCCGTCCCAAAGGGGCATATTGTATCACTTACAGCAGATTTGTGAATaGGTTTCCTGCACAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GKWQRVVGPSQRGILYHLQQICE*VSCTAS Trigger: GCTGGCTGTGCAGGAAACCCATTCACAAATCTGCTG...TAAGTGATACAATATGCCCCTTTGGGACGGACCCACTACTCTCTGCCATTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202997.2 |
||
| 3UTR CAA 72 bp | GACGTGAGTGAGAGGGGAGTGGGATGTTGCAGTCTTTaGAAGGACCTTAGCTCCAGCAATATCCTAGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: DVSERGVGCCSL*KDLSSSNILAC Trigger: ACATGCTAGGATATTGCTGGAGCTAAGGTCCTTCAAAAGACTGCAACATCCCACTCCCCTCTCACTCACGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031533.11 ENSMUST00000202997.2 |
||
| 3UTR CAA 72 bp | GGGTACCAACATCAGCTGTGCCGAGTGAAGCCAGGATaGGTAGACCATGAGCACGTGCTTGTATTTCTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GYQHQLCRVKPG*VDHEHVLVFLV Trigger: AACTAGAAATACAAGCACGTGCTCATGGTCTACCAATCCTGGCTTCACTCGGCACAGCTGATGTTGGTACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202997.2 |
||
| CDS-3UTR TCA 90 bp | TGTGAAGTGAGACAATGGATCAGAGAAAGCCACAGCTTGCTCATAGAACTCCGGGAGACCAGCATTAGCTaGAGAAATGCCCTGCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: CEVRQWIRESHSLLIELRETSIS*RNALLI Trigger: GATGAGCAGGGCATTTCTTCAGCTAATGCTGGTCTC...CCGGAGTTCTATGAGCAAGCTGTGGCTTTCTCTGATCCATTGTCTCACTTCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202997.2 |
||
| CDS-3UTR GCA 90 bp | GGGAAATGGCAGAGAGTAGTGGGTCCGTCCCAAAGGGGCATATTGTATCACTTAGCTGAAGAAATGCCCTaGTCATCACTGTACACATCC | + |
|
Preference number: 4 (lower is better) Translates to: GKWQRVVGPSQRGILYHLAEEMP*SSLYTS Trigger: GGATGTGTACAGTGATGAGCAGGGCATTTCTTCAGC...TAAGTGATACAATATGCCCCTTTGGGACGGACCCACTACTCTCTGCCATTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202997.2 |
||
| CDS-3UTR CCA 90 bp | GTATGTCCACCCGACAAAGGAAAAGAAATTATCACCAAATTTGTTAGTCGTGAACCAGAGGCATGCAGCTaGCTGCTGGAGGCTGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VCPPDKGKEIITKFVSREPEACS*LLEAAL Trigger: GAGCGCAGCCTCCAGCAGCCAGCTGCATGCCTCTGG...TTCACGACTAACAAATTTGGTGATAATTTCTTTTCCTTTGTCGGGTGGACATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031533.11 ENSMUST00000202997.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGCACTTCTAAACACACGCCACCCCTCCCCCTCGGCCAATATAATTCCTTTTGTGAAGTGAGACAATaGATCAGAGAAAGCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSTSKHTPPLPLGQYNSFCEVRQ*IRESHS Trigger: GCTGTGGCTTTCTCTGATCCATTGTCTCACTTCACA...AAAGGAATTATATTGGCCGAGGGGGAGGGGTGGCGTGTGTTTAGAAGTGCTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031533.11 |
||
| CDS-3UTR CCA 90 bp | GAGCTAAGGCTGCTTCGGCTGCTAGCTTTGGAAACTGCAGGGGAAATGGCAGAGCATATCATGAGGTTGTaGTTGTCCTTTTTCTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ELRLLRLLALETAGEMAEHIMRL*LSFFCL Trigger: GAGACAGAAAAAGGACAACCACAACCTCATGATATG...CTCTGCCATTTCCCCTGCAGTTTCCAAAGCTAGCAGCCGAAGCAGCCTTAGCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000202997.2 |
||
| CDS-3UTR TCA 90 bp | AATTCTTCCAGCACTTCTAAACACACGCCACCCCTCCCCCTCGGCCAATATAATCTTTTTGTAGCCACTTaGTGTAGTCCACTGATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NSSSTSKHTPPLPLGQYNLFVAT*CSPLMP Trigger: AGGCATCAGTGGACTACATCAAGTGGCTACAAAAAG...ATTATATTGGCCGAGGGGGAGGGGTGGCGTGTGTTTAGAAGTGCTGGAAGAATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000031533.11 |
||
| CDS-3UTR GCA 90 bp | GACAAGGATTCAACCATACATAGTATGTCCACCCGACAAAGGAAAAGAAATTATGCTCTGCCAGAGGCATaGAGCTGGCTGCTGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DKDSTIHSMSTRQRKRNYALPEA*SWLLEA Trigger: AGCCTCCAGCAGCCAGCTGCATGCCTCTGGCAGAGC...ATAATTTCTTTTCCTTTGTCGGGTGGACATACTATGTATGGTTGAATCCTTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031533.11 ENSMUST00000202997.2 |
||
| CDS-3UTR GCA 90 bp | ATTGTATCACTTAGTAGCATGCCATCCAATCTTTGTTCCTCTTTCAAAGCGGCACATGGGTTCATGCTCTaGCAGAGGCATGCAGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: IVSLSSMPSNLCSSFKAAHGFML*QRHAAG Trigger: GCCAGCTGCATGCCTCTGGCAGAGCATGAACCCATG...TGCCGCTTTGAAAGAGGAACAAAGATTGGATGGCATGCTACTAAGTGATACAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202997.2 |
||
| CDS-3UTR GCA 90 bp | GTATGTCCACCCGACAAAGGAAAAGAAATTATCACCAAATTTGTTAGTCGTGAACTGGCTGCTGGAGGCTaGGCTCTCTTGAGAGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VCPPDKGKEIITKFVSRELAAGG*ALLRVW Trigger: CCAGACTCTCAAGAGAGCGCAGCCTCCAGCAGCCAG...TTCACGACTAACAAATTTGGTGATAATTTCTTTTCCTTTGTCGGGTGGACATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031533.11 ENSMUST00000202997.2 |
||
| CDS-3UTR GCA 90 bp | GGCTTGTCCCCTGAGTTGGAGTCAGTTGTAAGCAACAGCCTCCTAAGTTCCTCTATACTCCCAGATAAATaGCATTTCTCAGCACCATCT | + |
|
Preference number: 4 (lower is better) Translates to: GLSPELESVVSNSLLSSSILPDK*HFSAPS Trigger: AGATGGTGCTGAGAAATGGCATTTATCTGGGAGTAT...AGAGGAACTTAGGAGGCTGTTGCTTACAACTGACTCCAACTCAGGGGACAAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202997.2 |
||
| CDS-3UTR GCA 90 bp | GGCTTGTCCCCTGAGTTGGAGTCAGTTGTAAGCAACAGCCTCCTAAGTTCCTCTTCTACCATCAGTTTCTaGAATTTCCTTTCTCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: GLSPELESVVSNSLLSSSSTISF*NFLSHG Trigger: CCCATGAGAAAGGAAATTGCAGAAACTGATGGTAGA...AGAGGAACTTAGGAGGCTGTTGCTTACAACTGACTCCAACTCAGGGGACAAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202997.2 |
||
| 3UTR CAA 72 bp | TGGCAGAGAGTAGTGGGTCCGTCCCAAAGGGGCATATaGTATCACTTAGTAGCATGCCATCCAATCTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: WQRVVGPSQRGI*YHLVACHPIFV Trigger: AACAAAGATTGGATGGCATGCTACTAAGTGATACAATATGCCCCTTTGGGACGGACCCACTACTCTCTGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202997.2 |
||
| CDS-3UTR TCA 90 bp | TCCAGCACTTCTAAACACACGCCACCCCTCCCCCTCGGCCAATATAATTCCTTTGATAAATCTGTGAAGTaGGACAATGGATCAGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSTSKHTPPLPLGQYNSFDKSVK*DNGSEK Trigger: TTTCTCTGATCCATTGTCTCACTTCACAGATTTATC...AAAGGAATTATATTGGCCGAGGGGGAGGGGTGGCGTGTGTTTAGAAGTGCTGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031533.11 |
||
| CDS-3UTR GCA 90 bp | TCCAGCACTTCTAAACACACGCCACCCCTCCCCCTCGGCCAATATAATTCCTTTTATCACTTAGTAGCATaGCATCCAATCTTTGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSTSKHTPPLPLGQYNSFYHLVA*HPIFVP Trigger: AGGAACAAAGATTGGATGGCATGCTACTAAGTGATA...AAAGGAATTATATTGGCCGAGGGGGAGGGGTGGCGTGTGTTTAGAAGTGCTGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031533.11 |
||
| 3UTR CAA 72 bp | TCAAACTCATCTTACAGAAACATATGGTGCACTTGGTaGCATTGTTTATGTGCCTCCGGGGTGTGTGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SNSSYRNIWCTW*HCLCASGVCVE Trigger: CTCAACACACACCCCGGAGGCACATAAACAATGCAACCAAGTGCACCATATGTTTCTGTAAGATGAGTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201406.2 |
||
| 3UTR CAA 72 bp | GTGTTCAAACTCATCTTACAGAAACATATGGTGCACTaGGTTGCATTGTTTATGTGCCTCCGGGGTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VFKLILQKHMVH*VALFMCLRGVC Trigger: ACACACACCCCGGAGGCACATAAACAATGCAACCAAGTGCACCATATGTTTCTGTAAGATGAGTTTGAACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201406.2 |
||
| CDS-3UTR GCA 90 bp | CAAGGTATGAAAGGCAGATCACAATTGAGTAGCACCAGCAGAGAGTTGCTTCCTATACTCCCAGATAAATaGCATTTCTCAGCACCATCT | + |
|
Preference number: 4 (lower is better) Translates to: QGMKGRSQLSSTSRELLPILPDK*HFSAPS Trigger: AGATGGTGCTGAGAAATGGCATTTATCTGGGAGTAT...AGGAAGCAACTCTCTGCTGGTGCTACTCAATTGTGATCTGCCTTTCATACCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031533.11 ENSMUST00000202997.2 |
||
| CDS-3UTR CCA 90 bp | CAAGGTATGAAAGGCAGATCACAATTGAGTAGCACCAGCAGAGAGTTGCTTCCTAGGATCATTAGACTTTaGAATAAGAGTGCCAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QGMKGRSQLSSTSRELLPRIIRL*NKSAKL Trigger: GAGCTTGGCACTCTTATTCCAAAGTCTAATGATCCT...AGGAAGCAACTCTCTGCTGGTGCTACTCAATTGTGATCTGCCTTTCATACCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031533.11 |
||
| CDS-3UTR CCA 90 bp | GACAAGGATTCAACCATACATAGTATGTCCACCCGACAAAGGAAAAGAAATTATAAACTGCAGGGGAAATaGCAGAGAGTAGTGGGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: DKDSTIHSMSTRQRKRNYKLQGK*QRVVGP Trigger: CGGACCCACTACTCTCTGCCATTTCCCCTGCAGTTT...ATAATTTCTTTTCCTTTGTCGGGTGGACATACTATGTATGGTTGAATCCTTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031533.11 |
||
| CDS-3UTR TCA 90 bp | GTATGTCCACCCGACAAAGGAAAAGAAATTATCACCAAATTTGTTAGTCGTGAAGAGACCAGCATTAGCTaGAGAAATGCCCTGCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: VCPPDKGKEIITKFVSREETSIS*RNALLI Trigger: GATGAGCAGGGCATTTCTTCAGCTAATGCTGGTCTC...TTCACGACTAACAAATTTGGTGATAATTTCTTTTCCTTTGTCGGGTGGACATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031533.11 ENSMUST00000202997.2 |
||
| CDS-3UTR CCA 90 bp | GACAAGGATTCAACCATACATAGTATGTCCACCCGACAAAGGAAAAGAAATTATCAGCAGATTTGTGAATaGGTTTCCTGCACAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DKDSTIHSMSTRQRKRNYQQICE*VSCTAS Trigger: GCTGGCTGTGCAGGAAACCCATTCACAAATCTGCTG...ATAATTTCTTTTCCTTTGTCGGGTGGACATACTATGTATGGTTGAATCCTTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031533.11 ENSMUST00000202997.2 |
||
| CDS-3UTR CCA 90 bp | CAAGGTATGAAAGGCAGATCACAATTGAGTAGCACCAGCAGAGAGTTGCTTCCTCAATTTCCTTTCTCATaGGTAGAATACTTGGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: QGMKGRSQLSSTSRELLPQFPFS*VEYLDK Trigger: CTTGTCCAAGTATTCTACCCATGAGAAAGGAAATTG...AGGAAGCAACTCTCTGCTGGTGCTACTCAATTGTGATCTGCCTTTCATACCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031533.11 ENSMUST00000202997.2 |
||
| CDS-3UTR CCA 90 bp | GTATGTCCACCCGACAAAGGAAAAGAAATTATCACCAAATTTGTTAGTCGTGAATGCTGCTTGGTGATGTaGGTACCAACATCAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VCPPDKGKEIITKFVSRECCLVM*VPTSAV Trigger: CACAGCTGATGTTGGTACCCACATCACCAAGCAGCA...TTCACGACTAACAAATTTGGTGATAATTTCTTTTCCTTTGTCGGGTGGACATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031533.11 |
||
| CDS-3UTR GCA 90 bp | GACAAGGATTCAACCATACATAGTATGTCCACCCGACAAAGGAAAAGAAATTATGCTGAAGAAATGCCCTaGTCATCACTGTACACATCC | + |
|
Preference number: 4 (lower is better) Translates to: DKDSTIHSMSTRQRKRNYAEEMP*SSLYTS Trigger: GGATGTGTACAGTGATGAGCAGGGCATTTCTTCAGC...ATAATTTCTTTTCCTTTGTCGGGTGGACATACTATGTATGGTTGAATCCTTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031533.11 ENSMUST00000202997.2 |
||
| CDS-3UTR GCA 90 bp | GTATGTCCACCCGACAAAGGAAAAGAAATTATCACCAAATTTGTTAGTCGTGAATCTACCATCAGTTTCTaGAATTTCCTTTCTCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: VCPPDKGKEIITKFVSRESTISF*NFLSHG Trigger: CCCATGAGAAAGGAAATTGCAGAAACTGATGGTAGA...TTCACGACTAACAAATTTGGTGATAATTTCTTTTCCTTTGTCGGGTGGACATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031533.11 ENSMUST00000202997.2 |
||
| CDS-3UTR CCA 90 bp | GTATGTCCACCCGACAAAGGAAAAGAAATTATCACCAAATTTGTTAGTCGTGAACTTTCAATGAGGTTGTaGTTGTCCTTTTTCTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VCPPDKGKEIITKFVSRELSMRL*LSFFCL Trigger: GAGACAGAAAAAGGACAACCACAACCTCATTGAAAG...TTCACGACTAACAAATTTGGTGATAATTTCTTTTCCTTTGTCGGGTGGACATAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031533.11 |
||
| 3UTR CAA 72 bp | GAACGTTATTTTCTGCATTGGGTAGTTGGTTCTCATTaGTTCTACACCGATTTAAATCATCTTGGCCTTACA | + |
|
Preference number: 4 (lower is better) Translates to: ERYFLHWVVGSH*FYTDLNHLGLT Trigger: TGTAAGGCCAAGATGATTTAAATCGGTGTAGAACAAATGAGAACCAACTACCCAATGCAGAAAATAACGTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201406.2 |
||
| CDS CCA 90 bp | CAGCAGATTTGTGAATGGGTTTCCTGCACAGCCAGCATCACTGTCTaGGCTCATGGGTTCATGCTCTGCCAGAGGCATGCAGCTGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QQICEWVSCTASITV*AHGFMLCQRHAAGC Trigger: GCAGCCAGCTGCATGCCTCTGGCAGAGCATGAACCCATGAGCCCAGACAGTGATGCTGGCTGTGCAGGAAACCCATTCACAAATCTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031533.11 ENSMUST00000202997.2 |
||
| CDS-3UTR CAA 90 bp | TCTTCCAGCACTTCTAAACACACGCCACCCCTCCCCCTCGGCCAATATAATTCCCGAGTGAAGCCAGGATaGGTAGACCATGAGCACGTG | + |
|
Preference number: 5 (lower is better) Translates to: SSSTSKHTPPLPLGQYNSRVKPG*VDHEHV Trigger: CACGTGCTCATGGTCTACCAATCCTGGCTTCACTCG...GGAATTATATTGGCCGAGGGGGAGGGGTGGCGTGTGTTTAGAAGTGCTGGAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031533.11 |
||
| CDS-3UTR CAA 90 bp | TCCAGCACTTCTAAACACACGCCACCCCTCCCCCTCGGCCAATATAATTCCTTTGGATGGGTCTGCTGCTaGGTGATGTGGGTACCAACA | + |
|
Preference number: 5 (lower is better) Translates to: SSTSKHTPPLPLGQYNSFGWVCC*VMWVPT Trigger: TGTTGGTACCCACATCACCAAGCAGCAGACCCATCC...AAAGGAATTATATTGGCCGAGGGGGAGGGGTGGCGTGTGTTTAGAAGTGCTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031533.11 |
||
| CDS-3UTR CAA 90 bp | TCCAGCACTTCTAAACACACGCCACCCCTCCCCCTCGGCCAATATAATTCCTTTGGCTTGTCCCCTGAGTaGGAGTCAGTTGTAAGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: SSTSKHTPPLPLGQYNSFGLSPE*ESVVSN Trigger: GTTGCTTACAACTGACTCCAACTCAGGGGACAAGCC...AAAGGAATTATATTGGCCGAGGGGGAGGGGTGGCGTGTGTTTAGAAGTGCTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031533.11 |
||
| CDS-3UTR CAA 90 bp | AATTCTTCCAGCACTTCTAAACACACGCCACCCCTCCCCCTCGGCCAATATAATCTTCGGCTGCTAGCTTaGGAAACTGCAGGGGAAATG | + |
|
Preference number: 5 (lower is better) Translates to: NSSSTSKHTPPLPLGQYNLRLLA*ETAGEM Trigger: CATTTCCCCTGCAGTTTCCAAAGCTAGCAGCCGAAG...ATTATATTGGCCGAGGGGGAGGGGTGGCGTGTGTTTAGAAGTGCTGGAAGAATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031533.11 |
||
| CDS-3UTR CAA 90 bp | TTGGAAACTGCAGGGGAAATGGCAGAGAGTAGTGGGTCCGTCCCAAAGGGGCATGCGCATATCATGAGGTaGTGGTTGTCCTTTTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LETAGEMAESSGSVPKGHAHIMR*WLSFFC Trigger: ACAGAAAAAGGACAACCACAACCTCATGATATGCGC...ATGCCCCTTTGGGACGGACCCACTACTCTCTGCCATTTCCCCTGCAGTTTCCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000202997.2 |
||
| CDS-3UTR CAA 90 bp | TCTTCCAGCACTTCTAAACACACGCCACCCCTCCCCCTCGGCCAATATAATTCCTTTTCTGTCTCTCCTTaGCCAAAGCTCTACCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSSTSKHTPPLPLGQYNSFSVSP*PKLYHQ Trigger: CTGATGGTAGAGCTTTGGCAAAGGAGAGACAGAAAA...GGAATTATATTGGCCGAGGGGGAGGGGTGGCGTGTGTTTAGAAGTGCTGGAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031533.11 ENSMUST00000202997.2 |
||
| CDS-3UTR CAA 90 bp | TCCAGCACTTCTAAACACACGCCACCCCTCCCCCTCGGCCAATATAATTCCTTTCATGCCATCCAATCTTaGTTCCTCTTTCAAAGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSTSKHTPPLPLGQYNSFHAIQS*FLFQSG Trigger: GCCGCTTTGAAAGAGGAACAAAGATTGGATGGCATG...AAAGGAATTATATTGGCCGAGGGGGAGGGGTGGCGTGTGTTTAGAAGTGCTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031533.11 |
||
| CDS-3UTR CAA 90 bp | TCCAGCACTTCTAAACACACGCCACCCCTCCCCCTCGGCCAATATAATTCCTTTTTTTCTGTCTCTCCTTaGCCAAAGCTCTACCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSTSKHTPPLPLGQYNSFFSVSP*PKLYHQ Trigger: CTGATGGTAGAGCTTTGGCAAAGGAGAGACAGAAAA...AAAGGAATTATATTGGCCGAGGGGGAGGGGTGGCGTGTGTTTAGAAGTGCTGGA 49% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000031533.11 ENSMUST00000202997.2 |
||
| CDS-3UTR CAA 90 bp | AATTCTTCCAGCACTTCTAAACACACGCCACCCCTCCCCCTCGGCCAATATAATTTTAGAATGGTCCCTTaGTTCCAGCGCATATCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: NSSSTSKHTPPLPLGQYNFRMVP*FQRISG Trigger: TCCTGATATGCGCTGGAACAAAGGGACCATTCTAAA...ATTATATTGGCCGAGGGGGAGGGGTGGCGTGTGTTTAGAAGTGCTGGAAGAATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031533.11 |
||
| CDS-3UTR CAA 90 bp | GACAAGGATTCAACCATACATAGTATGTCCACCCGACAAAGGAAAAGAAATTATCTTCTTTCAATGAGGTaGTGGTTGTCCTTTTTCTGT | + |
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Preference number: 5 (lower is better) Translates to: DKDSTIHSMSTRQRKRNYLLSMR*WLSFFC Trigger: ACAGAAAAAGGACAACCACAACCTCATTGAAAGAAG...ATAATTTCTTTTCCTTTGTCGGGTGGACATACTATGTATGGTTGAATCCTTGTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031533.11 |
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| CDS GCA 72 bp | GCCAGCATCACTGTCTGGGCTCATGGGTTCATGCTCTaGCAGAGGCATGCAGCTGGCTGCTGGAGGCTGCGC | + |
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Preference number: 6 (lower is better) Translates to: ASITVWAHGFML*QRHAAGCWRLR Trigger: GCGCAGCCTCCAGCAGCCAGCTGCATGCCTCTGGCAGAGCATGAACCCATGAGCCCAGACAGTGATGCTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031533.11 ENSMUST00000202997.2 |
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| CDS TCA 72 bp | GAGGCATGCAGCTGGCTGCTGGAGGCTGCGCTCTCTTaGGAGTCTGGTCGCATACCCGACAGTCAAAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: EACSWLLEAALS*ESGRIPDSQRS Trigger: TGACCTTTGACTGTCGGGTATGCGACCAGACTCTCAAGAGAGCGCAGCCTCCAGCAGCCAGCTGCATGCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031533.11 ENSMUST00000202997.2 |
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| CDS CCA 72 bp | GGTTTCCTGCACAGCCAGCATCACTGTCTGGGCTCATaGGTTCATGCTCTGCCAGAGGCATGCAGCTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: GFLHSQHHCLGS*VHALPEACSWL Trigger: CAGCCAGCTGCATGCCTCTGGCAGAGCATGAACCCATGAGCCCAGACAGTGATGCTGGCTGTGCAGGAAACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031533.11 ENSMUST00000202997.2 |
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| CDS CAA 72 bp | AGAGGCATGCAGCTGGCTGCTGGAGGCTGCGCTCTCTaGAGAGTCTGGTCGCATACCCGACAGTCAAAGGTC | + |
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Preference number: 6 (lower is better) Translates to: RGMQLAAGGCAL*RVWSHTRQSKV Trigger: GACCTTTGACTGTCGGGTATGCGACCAGACTCTCAAGAGAGCGCAGCCTCCAGCAGCCAGCTGCATGCCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031533.11 ENSMUST00000202997.2 |
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| CDS CCA 72 bp | TGTGAATGGGTTTCCTGCACAGCCAGCATCACTGTCTaGGCTCATGGGTTCATGCTCTGCCAGAGGCATGCA | + |
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Preference number: 6 (lower is better) Translates to: CEWVSCTASITV*AHGFMLCQRHA Trigger: TGCATGCCTCTGGCAGAGCATGAACCCATGAGCCCAGACAGTGATGCTGGCTGTGCAGGAAACCCATTCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031533.11 ENSMUST00000202997.2 |
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| CDS GCA 72 bp | TTTCCCAAGAGCCAGCAGATTTGTGAATGGGTTTCCTaGACAGCCAGCATCACTGTCTGGGCTCATGGGTTC | + |
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Preference number: 6 (lower is better) Translates to: FPKSQQICEWVS*TASITVWAHGF Trigger: GAACCCATGAGCCCAGACAGTGATGCTGGCTGTGCAGGAAACCCATTCACAAATCTGCTGGCTCTTGGGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031533.11 ENSMUST00000202997.2 |
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| CDS TCA 72 bp | ACTCCCGGGCTCTCTGTTGTTCTTTTTGTAGCCACTTaGTGTAGTCCACTGATGCCTTTAGAATGGTCCCTT | + |
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Preference number: 6 (lower is better) Translates to: TPGLSVVLFVAT*CSPLMPLEWSL Trigger: AAGGGACCATTCTAAAGGCATCAGTGGACTACATCAAGTGGCTACAAAAAGAACAACAGAGAGCCCGGGAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031533.11 |
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| CDS CCA 72 bp | CCCTTTGTTCCAGCGCATATCAGGATCATTAGACTTTaGAATAAGAGTGCCAAGCTCCTTGATTCGGTAATT | + |
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Preference number: 6 (lower is better) Translates to: PFVPAHIRIIRL*NKSAKLLDSVI Trigger: AATTACCGAATCAAGGAGCTTGGCACTCTTATTCCAAAGTCTAATGATCCTGATATGCGCTGGAACAAAGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031533.11 |
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