Pregenerated sensors for TFDP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038482Ensembl transcript IDs: ENSMUST00000170909.2, ENSMUST00000209396.2, ENSMUST00000209885.2, ENSMUST00000210501.2
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AACACATCCGCAGCTAGGCTCAAACTGCGCACACTCCTCCTCACTTaGAGCTGCACATCTAACTCCAGAACTCGCGGGTATCTTCTTGGG | + |
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Preference number: 1 (lower is better) Translates to: NTSAARLKLRTLLLT*SCTSNSRTRGYLLG Trigger: CCCAAGAAGATACCCGCGAGTTCTGGAGTTAGATGTGCAGCTCCAAGTGAGGAGGAGTGTGCGCAGTTTGAGCCTAGCTGCGGATGTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170909.2 ENSMUST00000209396.2 ENSMUST00000209885.2 ENSMUST00000210501.2 |
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| 3UTR GCA 90 bp | CAAATGGAAAACTTCATCCTAAAGCCTGGCTGTCCACCACCTGGGTaGTGGACATCGGAGGCAGGGCAGCACTTTGTCATTGTCACTGGT | + |
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Preference number: 1 (lower is better) Translates to: QMENFILKPGCPPPG*WTSEAGQHFVIVTG Trigger: ACCAGTGACAATGACAAAGTGCTGCCCTGCCTCCGATGTCCAGCACCCAGGTGGTGGACAGCCAGGCTTTAGGATGAAGTTTTCCATTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209396.2 ENSMUST00000209885.2 ENSMUST00000210501.2 |
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| 3UTR CCA 90 bp | TTAACAAATGGAAAACTTCATCCTAAAGCCTGGCTGTCCACCACCTaGGTGCTGGACATCGGAGGCAGGGCAGCACTTTGTCATTGTCAC | + |
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Preference number: 1 (lower is better) Translates to: LTNGKLHPKAWLSTT*VLDIGGRAALCHCH Trigger: GTGACAATGACAAAGTGCTGCCCTGCCTCCGATGTCCAGCACCCAGGTGGTGGACAGCCAGGCTTTAGGATGAAGTTTTCCATTTGTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209396.2 ENSMUST00000209885.2 ENSMUST00000210501.2 |
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| 3UTR-3UTR GCA 90 bp | AAGCCTGGCTGTCCACCACCTGGGTGCTGGACATCGGAGGCAGGGCAGCACTTTTTGAAGGCAATTTGCTaGAGGATGAGCTCCTGGAGC | + |
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Preference number: 2 (lower is better) Translates to: KPGCPPPGCWTSEAGQHFLKAIC*RMSSWS Trigger: GCTCCAGGAGCTCATCCTGCAGCAAATTGCCTTCAA...AAAGTGCTGCCCTGCCTCCGATGTCCAGCACCCAGGTGGTGGACAGCCAGGCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210501.2 |
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| 3UTR-3UTR CCA 90 bp | CGCACACTCCTCCTCACTTGGAGCTGCACATCTAACTCCAGAACTCGCGGGTATCTTCATCCTAAAGCCTaGCTGTCCACCACCTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: RTLLLTWSCTSNSRTRGYLHPKA*LSTTWV Trigger: CACCCAGGTGGTGGACAGCCAGGCTTTAGGATGAAG...ATACCCGCGAGTTCTGGAGTTAGATGTGCAGCTCCAAGTGAGGAGGAGTGTGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000209396.2 ENSMUST00000209885.2 ENSMUST00000210501.2 |
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| 3UTR-3UTR GCA 90 bp | GGGTTGAGTAATCAATCCTCCTCGTCGTTCTCATTAAAGTCATCATCGTCGTCATGGGAGGAGGCGGCCTaGGGGCCTGCTGCTCAGCTT | + |
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Preference number: 2 (lower is better) Translates to: GLSNQSSSSFSLKSSSSSWEEAA*GPAAQL Trigger: AAGCTGAGCAGCAGGCCCGCAGGCCGCCTCCTCCCA...TGACGACGATGATGACTTTAATGAGAACGACGAGGAGGATTGATTACTCAACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210501.2 |
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| 3UTR-3UTR CCA 90 bp | AAACTTCATCCTAAAGCCTGGCTGTCCACCACCTGGGTGCTGGACATCGGAGGCTCTGCATTAGCACGCTaGCTTCACAACACATCCGCA | + |
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Preference number: 2 (lower is better) Translates to: KLHPKAWLSTTWVLDIGGSALAR*LHNTSA Trigger: TGCGGATGTGTTGTGAAGCCAGCGTGCTAATGCAGA...GCCTCCGATGTCCAGCACCCAGGTGGTGGACAGCCAGGCTTTAGGATGAAGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000209396.2 ENSMUST00000209885.2 ENSMUST00000210501.2 |
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| 3UTR-3UTR GCA 90 bp | AAGCCTGGCTGTCCACCACCTGGGTGCTGGACATCGGAGGCAGGGCAGCACTTTTTCGCAATTTGTTGCTaGAATAGAGAAAAGGTGTCC | + |
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Preference number: 2 (lower is better) Translates to: KPGCPPPGCWTSEAGQHFFAICC*NREKVS Trigger: GGACACCTTTTCTCTATTGCAGCAACAAATTGCGAA...AAAGTGCTGCCCTGCCTCCGATGTCCAGCACCCAGGTGGTGGACAGCCAGGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000209396.2 ENSMUST00000209885.2 ENSMUST00000210501.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGGCGCAGTACAGTTTCCTCGGCAAACCCAGCAACAACTGTTGAGGGGCAAAACACTCCTCCTCACTTaGAGCTGCACATCTAACTCC | + |
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Preference number: 2 (lower is better) Translates to: VGAVQFPRQTQQQLLRGKTLLLT*SCTSNS Trigger: GGAGTTAGATGTGCAGCTCCAAGTGAGGAGGAGTGT...TTTGCCCCTCAACAGTTGTTGCTGGGTTTGCCGAGGAAACTGTACTGCGCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000170909.2 ENSMUST00000209396.2 ENSMUST00000209885.2 ENSMUST00000210501.2 |
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| 3UTR-3UTR CCA 90 bp | GAAAACTTCATCCTAAAGCCTGGCTGTCCACCACCTGGGTGCTGGACATCGGAGACACTCCTCCTCACTTaGAGCTGCACATCTAACTCC | + |
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Preference number: 2 (lower is better) Translates to: ENFILKPGCPPPGCWTSETLLLT*SCTSNS Trigger: GGAGTTAGATGTGCAGCTCCAAGTGAGGAGGAGTGT...CTCCGATGTCCAGCACCCAGGTGGTGGACAGCCAGGCTTTAGGATGAAGTTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209396.2 ENSMUST00000209885.2 ENSMUST00000210501.2 |
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| 3UTR-3UTR GCA 90 bp | GTGGGCGCAGTACAGTTTCCTCGGCAAACCCAGCAACAACTGTTGAGGGGCAAACTCCTCACTTGGAGCTaGACATCTAACTCCAGAACT | + |
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Preference number: 2 (lower is better) Translates to: VGAVQFPRQTQQQLLRGKLLTWS*TSNSRT Trigger: AGTTCTGGAGTTAGATGTGCAGCTCCAAGTGAGGAG...TTTGCCCCTCAACAGTTGTTGCTGGGTTTGCCGAGGAAACTGTACTGCGCCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170909.2 ENSMUST00000209396.2 ENSMUST00000209885.2 ENSMUST00000210501.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCACTGGTGTGGGCGCAGTACAGTTTCCTCGGCAAACCCAGCAACAACTGTTTCTGCATTAGCACGCTaGCTTCACAACACATCCGCA | + |
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Preference number: 2 (lower is better) Translates to: CHWCGRSTVSSANPATTVSALAR*LHNTSA Trigger: TGCGGATGTGTTGTGAAGCCAGCGTGCTAATGCAGA...AACAGTTGTTGCTGGGTTTGCCGAGGAAACTGTACTGCGCCCACACCAGTGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170909.2 ENSMUST00000209396.2 ENSMUST00000209885.2 ENSMUST00000210501.2 |
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| 3UTR-3UTR CCA 90 bp | GAAAACTTCATCCTAAAGCCTGGCTGTCCACCACCTGGGTGCTGGACATCGGAGCTTTGTCATTGTCACTaGTGTGGGCGCAGTACAGTT | + |
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Preference number: 2 (lower is better) Translates to: ENFILKPGCPPPGCWTSELCHCH*CGRSTV Trigger: AACTGTACTGCGCCCACACCAGTGACAATGACAAAG...CTCCGATGTCCAGCACCCAGGTGGTGGACAGCCAGGCTTTAGGATGAAGTTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209396.2 ENSMUST00000209885.2 ENSMUST00000210501.2 |
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| 3UTR-3UTR CCA 90 bp | CGCACACTCCTCCTCACTTGGAGCTGCACATCTAACTCCAGAACTCGCGGGTATGTAGAGCTGTGCTACTaGCTTGGTTCTTTGGACACT | + |
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Preference number: 2 (lower is better) Translates to: RTLLLTWSCTSNSRTRGYVELCY*LGSLDT Trigger: AGTGTCCAAAGAACCAAGCCAGTAGCACAGCTCTAC...ATACCCGCGAGTTCTGGAGTTAGATGTGCAGCTCCAAGTGAGGAGGAGTGTGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000209396.2 ENSMUST00000209885.2 ENSMUST00000210501.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGCTAGGCTCAAACTGCGCACACTCCTCCTCACTTGGAGCTGCACATCTAACAAATGTCAGGGAAGATaGACAGACATCCGAAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: AARLKLRTLLLTWSCTSNKCQGR*TDIRRA Trigger: TGCCCTTCGGATGTCTGTCCATCTTCCCTGACATTT...GTTAGATGTGCAGCTCCAAGTGAGGAGGAGTGTGCGCAGTTTGAGCCTAGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210501.2 |
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| 3UTR-3UTR CCA 90 bp | AATGGAAAACTTCATCCTAAAGCCTGGCTGTCCACCACCTGGGTGCTGGACATCACACTCCTCCTCACTTaGAGCTGCACATCTAACTCC | + |
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Preference number: 2 (lower is better) Translates to: NGKLHPKAWLSTTWVLDITLLLT*SCTSNS Trigger: GGAGTTAGATGTGCAGCTCCAAGTGAGGAGGAGTGT...GATGTCCAGCACCCAGGTGGTGGACAGCCAGGCTTTAGGATGAAGTTTTCCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209396.2 ENSMUST00000209885.2 ENSMUST00000210501.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTCCTCGTCGTTCTCATTAAAGTCATCATCGTCGTCATCATCCTCCCCAACGCCACCAATGGATCCCTaGGCCATTTCTGTCACGTAT | + |
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Preference number: 2 (lower is better) Translates to: SSSSFSLKSSSSSSSSPTPPMDP*AISVTY Trigger: ATACGTGACAGAAATGGCTCAGGGATCCATTGGTGG...CGTTGGGGAGGATGATGACGACGATGATGACTTTAATGAGAACGACGAGGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210501.2 |
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| 3UTR-3UTR GCA 90 bp | AATGGAAAACTTCATCCTAAAGCCTGGCTGTCCACCACCTGGGTGCTGGACATCCTCCTCACTTGGAGCTaGACATCTAACTCCAGAACT | + |
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Preference number: 2 (lower is better) Translates to: NGKLHPKAWLSTTWVLDILLTWS*TSNSRT Trigger: AGTTCTGGAGTTAGATGTGCAGCTCCAAGTGAGGAG...GATGTCCAGCACCCAGGTGGTGGACAGCCAGGCTTTAGGATGAAGTTTTCCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209396.2 ENSMUST00000209885.2 ENSMUST00000210501.2 |
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| 3UTR-3UTR CCA 90 bp | AATGGAAAACTTCATCCTAAAGCCTGGCTGTCCACCACCTGGGTGCTGGACATCCTTTGTCATTGTCACTaGTGTGGGCGCAGTACAGTT | + |
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Preference number: 2 (lower is better) Translates to: NGKLHPKAWLSTTWVLDILCHCH*CGRSTV Trigger: AACTGTACTGCGCCCACACCAGTGACAATGACAAAG...GATGTCCAGCACCCAGGTGGTGGACAGCCAGGCTTTAGGATGAAGTTTTCCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209396.2 ENSMUST00000209885.2 ENSMUST00000210501.2 |
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| 3UTR-3UTR GCA 90 bp | CGCACACTCCTCCTCACTTGGAGCTGCACATCTAACTCCAGAACTCGCGGGTATTTCGCAATTTGTTGCTaGAATAGAGAAAAGGTGTCC | + |
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Preference number: 2 (lower is better) Translates to: RTLLLTWSCTSNSRTRGYFAICC*NREKVS Trigger: GGACACCTTTTCTCTATTGCAGCAACAAATTGCGAA...ATACCCGCGAGTTCTGGAGTTAGATGTGCAGCTCCAAGTGAGGAGGAGTGTGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209396.2 ENSMUST00000209885.2 ENSMUST00000210501.2 |
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| 3UTR-3UTR GCA 90 bp | CTCGTCGTTCTCATTAAAGTCATCATCGTCGTCATCATCCTCCCCAACGTAGGATTCTTGAAGGCAATTTaGTGCAGGATGAGCTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: LVVLIKVIIVVIILPNVGFLKAI*CRMSSW Trigger: CCAGGAGCTCATCCTGCAGCAAATTGCCTTCAAGAA...TCCTACGTTGGGGAGGATGATGACGACGATGATGACTTTAATGAGAACGACGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210501.2 |
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| 3UTR-3UTR GCA 90 bp | GGGTTGAGTAATCAATCCTCCTCGTCGTTCTCATTAAAGTCATCATCGTCGTCATTCGCAATTTGTTGCTaGAATAGAGAAAAGGTGTCC | + |
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Preference number: 2 (lower is better) Translates to: GLSNQSSSSFSLKSSSSSFAICC*NREKVS Trigger: GGACACCTTTTCTCTATTGCAGCAACAAATTGCGAA...TGACGACGATGATGACTTTAATGAGAACGACGAGGAGGATTGATTACTCAACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210501.2 |
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| 3UTR-3UTR CAA 90 bp | AAACTTCATCCTAAAGCCTGGCTGTCCACCACCTGGGTGCTGGACATCGGAGGCGGCAGCACTTTGTCATaGTCACTGGTGTGGGCGCAG | + |
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Preference number: 3 (lower is better) Translates to: KLHPKAWLSTTWVLDIGGGSTLS*SLVWAQ Trigger: CTGCGCCCACACCAGTGACAATGACAAAGTGCTGCC...GCCTCCGATGTCCAGCACCCAGGTGGTGGACAGCCAGGCTTTAGGATGAAGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000209396.2 ENSMUST00000209885.2 ENSMUST00000210501.2 |
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| 3UTR CCA 72 bp | TTCATCCTAAAGCCTGGCTGTCCACCACCTGGGTGCTaGACATCGGAGGCAGGGCAGCACTTTGTCATTGTC | + |
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Preference number: 3 (lower is better) Translates to: FILKPGCPPPGC*TSEAGQHFVIV Trigger: GACAATGACAAAGTGCTGCCCTGCCTCCGATGTCCAGCACCCAGGTGGTGGACAGCCAGGCTTTAGGATGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000209396.2 ENSMUST00000209885.2 ENSMUST00000210501.2 |
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| 3UTR CCA 72 bp | GGAAAACTTCATCCTAAAGCCTGGCTGTCCACCACCTaGGTGCTGGACATCGGAGGCAGGGCAGCACTTTGT | + |
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Preference number: 3 (lower is better) Translates to: GKLHPKAWLSTT*VLDIGGRAALC Trigger: ACAAAGTGCTGCCCTGCCTCCGATGTCCAGCACCCAGGTGGTGGACAGCCAGGCTTTAGGATGAAGTTTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209396.2 ENSMUST00000209885.2 ENSMUST00000210501.2 |
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| 3UTR GCA 72 bp | GCTGGCTTCACAACACATCCGCAGCTAGGCTCAAACTaGGCACACTCCTCCTCACTTGGAGCTGCACATCTA | + |
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Preference number: 3 (lower is better) Translates to: AGFTTHPQLGSN*AHSSSLGAAHL Trigger: TAGATGTGCAGCTCCAAGTGAGGAGGAGTGTGCGCAGTTTGAGCCTAGCTGCGGATGTGTTGTGAAGCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170909.2 ENSMUST00000209396.2 ENSMUST00000209885.2 ENSMUST00000210501.2 |
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| 3UTR CCA 72 bp | GCAGCTAGGCTCAAACTGCGCACACTCCTCCTCACTTaGAGCTGCACATCTAACTCCAGAACTCGCGGGTAT | + |
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Preference number: 3 (lower is better) Translates to: AARLKLRTLLLT*SCTSNSRTRGY Trigger: ATACCCGCGAGTTCTGGAGTTAGATGTGCAGCTCCAAGTGAGGAGGAGTGTGCGCAGTTTGAGCCTAGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170909.2 ENSMUST00000209396.2 ENSMUST00000209885.2 ENSMUST00000210501.2 |
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| 3UTR-3UTR CAA 90 bp | TCCTCCTCGTCGTTCTCATTAAAGTCATCATCGTCGTCATCATCCTCCCCAACGGGCAGCACTTTGTCATaGTCACTGGTGTGGGCGCAG | + |
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Preference number: 3 (lower is better) Translates to: SSSSFSLKSSSSSSSSPTGSTLS*SLVWAQ Trigger: CTGCGCCCACACCAGTGACAATGACAAAGTGCTGCC...CGTTGGGGAGGATGATGACGACGATGATGACTTTAATGAGAACGACGAGGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210501.2 |
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| 3UTR CCA 72 bp | CATGATTTAACAAATGGAAAACTTCATCCTAAAGCCTaGCTGTCCACCACCTGGGTGCTGGACATCGGAGGC | + |
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Preference number: 3 (lower is better) Translates to: HDLTNGKLHPKA*LSTTWVLDIGG Trigger: GCCTCCGATGTCCAGCACCCAGGTGGTGGACAGCCAGGCTTTAGGATGAAGTTTTCCATTTGTTAAATCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209396.2 ENSMUST00000209885.2 ENSMUST00000210501.2 |
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| CDS-3UTR GCA 90 bp | ATCCTAAAGCCTGGCTGTCCACCACCTGGGTGCTGGACATCGGAGGCAGGGCAGTGGGAGGAGGCGGCCTaGGGGCCTGCTGCTCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: ILKPGCPPPGCWTSEAGQWEEAA*GPAAQL Trigger: AAGCTGAGCAGCAGGCCCGCAGGCCGCCTCCTCCCA...CTGCCCTGCCTCCGATGTCCAGCACCCAGGTGGTGGACAGCCAGGCTTTAGGAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209396.2 ENSMUST00000209885.2 |
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| CDS-3UTR TCA 90 bp | CATCCTAAAGCCTGGCTGTCCACCACCTGGGTGCTGGACATCGGAGGCAGGGCAGCTTCCCAAGTGTGTTaGCTGTGGACGGGTGGACGG | + |
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Preference number: 4 (lower is better) Translates to: HPKAWLSTTWVLDIGGRAASQVC*LWTGGR Trigger: CCGTCCACCCGTCCACAGTCAACACACTTGGGAAGC...TGCCCTGCCTCCGATGTCCAGCACCCAGGTGGTGGACAGCCAGGCTTTAGGATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209885.2 ENSMUST00000210501.2 |
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| CDS-3UTR TCA 90 bp | ATCCTAAAGCCTGGCTGTCCACCACCTGGGTGCTGGACATCGGAGGCAGGGCAGGTGACTGCTTCTGTTTaGTCCTCTCCAGCCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: ILKPGCPPPGCWTSEAGQVTASV*SSPASS Trigger: AGAGGAGGCTGGAGAGGATCAAACAGAAGCAGTCAC...CTGCCCTGCCTCCGATGTCCAGCACCCAGGTGGTGGACAGCCAGGCTTTAGGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209396.2 ENSMUST00000209885.2 |
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| CDS-3UTR TCA 90 bp | CATCCTAAAGCCTGGCTGTCCACCACCTGGGTGCTGGACATCGGAGGCAGGGCAGAGCTCCTGGAGCTGTaGCTGCTTCTGTTTGATCCT | + |
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Preference number: 4 (lower is better) Translates to: HPKAWLSTTWVLDIGGRAELLEL*LLLFDP Trigger: AGGATCAAACAGAAGCAGTCACAGCTCCAGGAGCTC...TGCCCTGCCTCCGATGTCCAGCACCCAGGTGGTGGACAGCCAGGCTTTAGGATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209396.2 ENSMUST00000209885.2 |
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| CDS-3UTR GCA 90 bp | GGTGTGGGCGCAGTACAGTTTCCTCGGCAAACCCAGCAACAACTGTTGAGGGGCAATGCCGCAGGCCCTTaGCATTCTTCTCGCCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: GVGAVQFPRQTQQQLLRGNAAGP*HSSRPS Trigger: GGAAGGGCGAGAAGAATGGCAAGGGCCTGCGGCATT...GCCCCTCAACAGTTGTTGCTGGGTTTGCCGAGGAAACTGTACTGCGCCCACACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170909.2 ENSMUST00000209885.2 |
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| CDS-3UTR GCA 90 bp | AAGCCTGGCTGTCCACCACCTGGGTGCTGGACATCGGAGGCAGGGCAGCACTTTCTCTCCAGCCTCCTCTaGCTCTCTACCTCTAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: KPGCPPPGCWTSEAGQHFLSSLL*LSTSKF Trigger: GAACTTAGAGGTAGAGAGGCAGAGGAGGCTGGAGAG...AAAGTGCTGCCCTGCCTCCGATGTCCAGCACCCAGGTGGTGGACAGCCAGGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209396.2 ENSMUST00000209885.2 |
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| CDS-3UTR GCA 90 bp | TCCTCACTTGGAGCTGCACATCTAACTCCAGAACTCGCGGGTATCTTCTTGGGATGGGAGGAGGCGGCCTaGGGGCCTGCTGCTCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: SSLGAAHLTPELAGIFLGWEEAA*GPAAQL Trigger: AAGCTGAGCAGCAGGCCCGCAGGCCGCCTCCTCCCA...TCCCAAGAAGATACCCGCGAGTTCTGGAGTTAGATGTGCAGCTCCAAGTGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170909.2 ENSMUST00000209396.2 ENSMUST00000209885.2 |
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| CDS-3UTR GCA 90 bp | AGCTGCACATCTAACTCCAGAACTCGCGGGTATCTTCTTGGGAGTAGGCCAAAATGGGAGGAGGCGGCCTaGGGGCCTGCTGCTCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: SCTSNSRTRGYLLGSRPKWEEAA*GPAAQL Trigger: AAGCTGAGCAGCAGGCCCGCAGGCCGCCTCCTCCCA...TTTTGGCCTACTCCCAAGAAGATACCCGCGAGTTCTGGAGTTAGATGTGCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170909.2 ENSMUST00000209396.2 ENSMUST00000209885.2 |
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| CDS-3UTR TCA 90 bp | TCCTCACTTGGAGCTGCACATCTAACTCCAGAACTCGCGGGTATCTTCTTGGGAGCTTCCCAAGTGTGTTaGCTGTGGACGGGTGGACGG | + |
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Preference number: 4 (lower is better) Translates to: SSLGAAHLTPELAGIFLGASQVC*LWTGGR Trigger: CCGTCCACCCGTCCACAGTCAACACACTTGGGAAGC...TCCCAAGAAGATACCCGCGAGTTCTGGAGTTAGATGTGCAGCTCCAAGTGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170909.2 ENSMUST00000209885.2 ENSMUST00000210501.2 |
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| CDS-3UTR GCA 90 bp | GCACACTCCTCCTCACTTGGAGCTGCACATCTAACTCCAGAACTCGCGGGTATCCTCTCCAGCCTCCTCTaGCTCTCTACCTCTAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: AHSSSLGAAHLTPELAGILSSLL*LSTSKF Trigger: GAACTTAGAGGTAGAGAGGCAGAGGAGGCTGGAGAG...GATACCCGCGAGTTCTGGAGTTAGATGTGCAGCTCCAAGTGAGGAGGAGTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170909.2 ENSMUST00000209396.2 ENSMUST00000209885.2 |
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| CDS-3UTR GCA 90 bp | ACTGGTGTGGGCGCAGTACAGTTTCCTCGGCAAACCCAGCAACAACTGTTGAGGCTCTCCAGCCTCCTCTaGCTCTCTACCTCTAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: TGVGAVQFPRQTQQQLLRLSSLL*LSTSKF Trigger: GAACTTAGAGGTAGAGAGGCAGAGGAGGCTGGAGAG...CCTCAACAGTTGTTGCTGGGTTTGCCGAGGAAACTGTACTGCGCCCACACCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170909.2 ENSMUST00000209396.2 ENSMUST00000209885.2 |
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| CDS-3UTR TCA 90 bp | CTCGTCGTTCTCATTAAAGTCATCATCGTCGTCATCATCCTCCCCAACGTAGGAGCTTCCCAAGTGTGTTaGCTGTGGACGGGTGGACGG | + |
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Preference number: 4 (lower is better) Translates to: LVVLIKVIIVVIILPNVGASQVC*LWTGGR Trigger: CCGTCCACCCGTCCACAGTCAACACACTTGGGAAGC...TCCTACGTTGGGGAGGATGATGACGACGATGATGACTTTAATGAGAACGACGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210501.2 |
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| CDS-3UTR GCA 90 bp | GGCTCTGCATTAGCACGCTGGCTTCACAACACATCCGCAGCTAGGCTCAAACTGGTGGTTCCTTTCCTCTaGACCTTCTCACACACCTTC | + |
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Preference number: 4 (lower is better) Translates to: GSALARWLHNTSAARLKLVVPFL*TFSHTF Trigger: GAAGGTGTGTGAGAAGGTGCAGAGGAAAGGAACCAC...CAGTTTGAGCCTAGCTGCGGATGTGTTGTGAAGCCAGCGTGCTAATGCAGAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170909.2 ENSMUST00000209396.2 ENSMUST00000209885.2 |
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| CDS-3UTR GCA 90 bp | GGCTCTGCATTAGCACGCTGGCTTCACAACACATCCGCAGCTAGGCTCAAACTGTTGAAGGCAATTTGCTaGAGGATGAGCTCCTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: GSALARWLHNTSAARLKLLKAIC*RMSSWS Trigger: GCTCCAGGAGCTCATCCTGCAGCAAATTGCCTTCAA...CAGTTTGAGCCTAGCTGCGGATGTGTTGTGAAGCCAGCGTGCTAATGCAGAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170909.2 ENSMUST00000209396.2 ENSMUST00000209885.2 |
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| CDS-3UTR GCA 90 bp | ACTGGTGTGGGCGCAGTACAGTTTCCTCGGCAAACCCAGCAACAACTGTTGAGGTTGAAGGCAATTTGCTaGAGGATGAGCTCCTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: TGVGAVQFPRQTQQQLLRLKAIC*RMSSWS Trigger: GCTCCAGGAGCTCATCCTGCAGCAAATTGCCTTCAA...CCTCAACAGTTGTTGCTGGGTTTGCCGAGGAAACTGTACTGCGCCCACACCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170909.2 ENSMUST00000209396.2 ENSMUST00000209885.2 |
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| CDS-3UTR GCA 90 bp | AAACTTCATCCTAAAGCCTGGCTGTCCACCACCTGGGTGCTGGACATCGGAGGCTTCTTGAAGGCAATTTaGTGCAGGATGAGCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: KLHPKAWLSTTWVLDIGGFLKAI*CRMSSW Trigger: CCAGGAGCTCATCCTGCAGCAAATTGCCTTCAAGAA...GCCTCCGATGTCCAGCACCCAGGTGGTGGACAGCCAGGCTTTAGGATGAAGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209396.2 ENSMUST00000209885.2 |
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| CDS-3UTR TCA 90 bp | TCCTCCTCACTTGGAGCTGCACATCTAACTCCAGAACTCGCGGGTATCTTCTTGGTGACTGCTTCTGTTTaGTCCTCTCCAGCCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: SSSLGAAHLTPELAGIFLVTASV*SSPASS Trigger: AGAGGAGGCTGGAGAGGATCAAACAGAAGCAGTCAC...CAAGAAGATACCCGCGAGTTCTGGAGTTAGATGTGCAGCTCCAAGTGAGGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170909.2 ENSMUST00000209396.2 ENSMUST00000209885.2 |
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| CDS-3UTR TCA 90 bp | TCCTCCTCACTTGGAGCTGCACATCTAACTCCAGAACTCGCGGGTATCTTCTTGGAGCTCCTGGAGCTGTaGCTGCTTCTGTTTGATCCT | + |
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Preference number: 4 (lower is better) Translates to: SSSLGAAHLTPELAGIFLELLEL*LLLFDP Trigger: AGGATCAAACAGAAGCAGTCACAGCTCCAGGAGCTC...CAAGAAGATACCCGCGAGTTCTGGAGTTAGATGTGCAGCTCCAAGTGAGGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170909.2 ENSMUST00000209396.2 ENSMUST00000209885.2 |
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| CDS-3UTR TCA 90 bp | ATTGTCACTGGTGTGGGCGCAGTACAGTTTCCTCGGCAAACCCAGCAACAACTGCCACCAATGGATCCCTaGGCCATTTCTGTCACGTAT | + |
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Preference number: 4 (lower is better) Translates to: IVTGVGAVQFPRQTQQQLPPMDP*AISVTY Trigger: ATACGTGACAGAAATGGCTCAGGGATCCATTGGTGG...CAGTTGTTGCTGGGTTTGCCGAGGAAACTGTACTGCGCCCACACCAGTGACAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170909.2 ENSMUST00000209396.2 ENSMUST00000209885.2 |
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| CDS-3UTR GCA 90 bp | AGAGGCTCTGCATTAGCACGCTGGCTTCACAACACATCCGCAGCTAGGCTCAAAGTGGTTCCTTTCCTCTaGACCTTCTCACACACCTTC | + |
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Preference number: 4 (lower is better) Translates to: RGSALARWLHNTSAARLKVVPFL*TFSHTF Trigger: GAAGGTGTGTGAGAAGGTGCAGAGGAAAGGAACCAC...TTTGAGCCTAGCTGCGGATGTGTTGTGAAGCCAGCGTGCTAATGCAGAGCCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170909.2 ENSMUST00000209396.2 ENSMUST00000209885.2 |
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| CDS-3UTR GCA 90 bp | CGCACACTCCTCCTCACTTGGAGCTGCACATCTAACTCCAGAACTCGCGGGTATTTCTTGAAGGCAATTTaGTGCAGGATGAGCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: RTLLLTWSCTSNSRTRGYFLKAI*CRMSSW Trigger: CCAGGAGCTCATCCTGCAGCAAATTGCCTTCAAGAA...ATACCCGCGAGTTCTGGAGTTAGATGTGCAGCTCCAAGTGAGGAGGAGTGTGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170909.2 ENSMUST00000209396.2 ENSMUST00000209885.2 |
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| CDS-3UTR CCA 90 bp | ACTGGTGTGGGCGCAGTACAGTTTCCTCGGCAAACCCAGCAACAACTGTTGAGGACACAAAATGCGTGTTaGGAGTGTGTGGGCTTCCTA | + |
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Preference number: 4 (lower is better) Translates to: TGVGAVQFPRQTQQQLLRTQNAC*ECVGFL Trigger: TAGGAAGCCCACACACTCCCAACACGCATTTTGTGT...CCTCAACAGTTGTTGCTGGGTTTGCCGAGGAAACTGTACTGCGCCCACACCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170909.2 ENSMUST00000209885.2 ENSMUST00000210501.2 |
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| CDS-3UTR TCA 90 bp | TCACTTGGAGCTGCACATCTAACTCCAGAACTCGCGGGTATCTTCTTGGGAGTAGAGCTCCTGGAGCTGTaGCTGCTTCTGTTTGATCCT | + |
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Preference number: 4 (lower is better) Translates to: SLGAAHLTPELAGIFLGVELLEL*LLLFDP Trigger: AGGATCAAACAGAAGCAGTCACAGCTCCAGGAGCTC...TACTCCCAAGAAGATACCCGCGAGTTCTGGAGTTAGATGTGCAGCTCCAAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170909.2 ENSMUST00000209396.2 ENSMUST00000209885.2 |
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| CDS-3UTR TCA 90 bp | CTCCTCCTCACTTGGAGCTGCACATCTAACTCCAGAACTCGCGGGTATCTTCTTCCACCAATGGATCCCTaGGCCATTTCTGTCACGTAT | + |
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Preference number: 4 (lower is better) Translates to: LLLTWSCTSNSRTRGYLLPPMDP*AISVTY Trigger: ATACGTGACAGAAATGGCTCAGGGATCCATTGGTGG...AAGAAGATACCCGCGAGTTCTGGAGTTAGATGTGCAGCTCCAAGTGAGGAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170909.2 ENSMUST00000209396.2 ENSMUST00000209885.2 |
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| CDS-3UTR GCA 90 bp | AATGGAAAACTTCATCCTAAAGCCTGGCTGTCCACCACCTGGGTGCTGGACATCGTGGTTCCTTTCCTCTaGACCTTCTCACACACCTTC | + |
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Preference number: 4 (lower is better) Translates to: NGKLHPKAWLSTTWVLDIVVPFL*TFSHTF Trigger: GAAGGTGTGTGAGAAGGTGCAGAGGAAAGGAACCAC...GATGTCCAGCACCCAGGTGGTGGACAGCCAGGCTTTAGGATGAAGTTTTCCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209396.2 ENSMUST00000209885.2 |
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| CDS-3UTR GCA 90 bp | CTCCTCCTCACTTGGAGCTGCACATCTAACTCCAGAACTCGCGGGTATCTTCTTTTGAAGGCAATTTGCTaGAGGATGAGCTCCTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: LLLTWSCTSNSRTRGYLLLKAIC*RMSSWS Trigger: GCTCCAGGAGCTCATCCTGCAGCAAATTGCCTTCAA...AAGAAGATACCCGCGAGTTCTGGAGTTAGATGTGCAGCTCCAAGTGAGGAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170909.2 ENSMUST00000209396.2 ENSMUST00000209885.2 |
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| CDS-3UTR CCA 90 bp | ACTGGTGTGGGCGCAGTACAGTTTCCTCGGCAAACCCAGCAACAACTGTTGAGGCATTGCTCAAATCACTaGCAGAAAGCCTTGTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: TGVGAVQFPRQTQQQLLRHCSNH*QKALCH Trigger: ATGGCACAAGGCTTTCTGCCAGTGATTTGAGCAATG...CCTCAACAGTTGTTGCTGGGTTTGCCGAGGAAACTGTACTGCGCCCACACCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170909.2 ENSMUST00000209396.2 ENSMUST00000209885.2 |
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| CDS-3UTR GCA 90 bp | GCAGCTAGGCTCAAACTGCGCACACTCCTCCTCACTTGGAGCTGCACATCTAACGTGCCAATCACCACTTaGTGTGTGATATTGACATTG | + |
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Preference number: 4 (lower is better) Translates to: AARLKLRTLLLTWSCTSNVPITT*CVILTL Trigger: CAATGTCAATATCACACAGCAAGTGGTGATTGGCAC...GTTAGATGTGCAGCTCCAAGTGAGGAGGAGTGTGCGCAGTTTGAGCCTAGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170909.2 ENSMUST00000209885.2 ENSMUST00000210501.2 |
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| CDS-3UTR GCA 90 bp | TCCTCCTCACTTGGAGCTGCACATCTAACTCCAGAACTCGCGGGTATCTTCTTGTTCTTGAAGGCAATTTaGTGCAGGATGAGCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: SSSLGAAHLTPELAGIFLFLKAI*CRMSSW Trigger: CCAGGAGCTCATCCTGCAGCAAATTGCCTTCAAGAA...CAAGAAGATACCCGCGAGTTCTGGAGTTAGATGTGCAGCTCCAAGTGAGGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170909.2 ENSMUST00000209396.2 ENSMUST00000209885.2 |
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| CDS-3UTR CCA 90 bp | TGTCACTGGTGTGGGCGCAGTACAGTTTCCTCGGCAAACCCAGCAACAACTGTTCATTGCTCAAATCACTaGCAGAAAGCCTTGTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: CHWCGRSTVSSANPATTVHCSNH*QKALCH Trigger: ATGGCACAAGGCTTTCTGCCAGTGATTTGAGCAATG...AACAGTTGTTGCTGGGTTTGCCGAGGAAACTGTACTGCGCCCACACCAGTGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170909.2 ENSMUST00000209396.2 ENSMUST00000209885.2 |
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| 3UTR CAA 72 bp | CCTGAAGCTGATTCGAAGGGGAGAGGGGTCTACGGGTaGAGTAATCAATCCTCCTCGTCGTTCTCATTAAAG | + |
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Preference number: 4 (lower is better) Translates to: PEADSKGRGVYG*SNQSSSSFSLK Trigger: CTTTAATGAGAACGACGAGGAGGATTGATTACTCAACCCGTAGACCCCTCTCCCCTTCGAATCAGCTTCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210501.2 |
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| CDS-3UTR GCA 90 bp | ATTGTCACTGGTGTGGGCGCAGTACAGTTTCCTCGGCAAACCCAGCAACAACTGGTGCCAATCACCACTTaGTGTGTGATATTGACATTG | + |
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Preference number: 4 (lower is better) Translates to: IVTGVGAVQFPRQTQQQLVPITT*CVILTL Trigger: CAATGTCAATATCACACAGCAAGTGGTGATTGGCAC...CAGTTGTTGCTGGGTTTGCCGAGGAAACTGTACTGCGCCCACACCAGTGACAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170909.2 ENSMUST00000209885.2 ENSMUST00000210501.2 |
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| CDS-3UTR GCA 90 bp | ACAGAAAGCCCCACTTTAAGTTTCTTTCCTCTATACGTGTTTTTCCTGAAGCTGAATGCCGCAGGCCCTTaGCATTCTTCTCGCCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: TESPTLSFFPLYVFFLKLNAAGP*HSSRPS Trigger: GGAAGGGCGAGAAGAATGGCAAGGGCCTGCGGCATT...CAGCTTCAGGAAAAACACGTATAGAGGAAAGAAACTTAAAGTGGGGCTTTCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170909.2 ENSMUST00000209885.2 |
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| CDS-3UTR CCA 90 bp | CTCGTCGTTCTCATTAAAGTCATCATCGTCGTCATCATCCTCCCCAACGTAGGAACACAAAATGCGTGTTaGGAGTGTGTGGGCTTCCTA | + |
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Preference number: 4 (lower is better) Translates to: LVVLIKVIIVVIILPNVGTQNAC*ECVGFL Trigger: TAGGAAGCCCACACACTCCCAACACGCATTTTGTGT...TCCTACGTTGGGGAGGATGATGACGACGATGATGACTTTAATGAGAACGACGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210501.2 |
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| CDS-3UTR CCA 90 bp | ATATGGCGCTTGTTAAACAGTAGAGCTGTGCTACTGGCTTGGTTCTTTGGACACCATTGCTCAAATCACTaGCAGAAAGCCTTGTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: IWRLLNSRAVLLAWFFGHHCSNH*QKALCH Trigger: ATGGCACAAGGCTTTCTGCCAGTGATTTGAGCAATG...GTGTCCAAAGAACCAAGCCAGTAGCACAGCTCTACTGTTTAACAAGCGCCATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209396.2 ENSMUST00000209885.2 |
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| CDS-3UTR TCA 90 bp | ACAGAAAGCCCCACTTTAAGTTTCTTTCCTCTATACGTGTTTTTCCTGAAGCTGCCACCAATGGATCCCTaGGCCATTTCTGTCACGTAT | + |
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Preference number: 4 (lower is better) Translates to: TESPTLSFFPLYVFFLKLPPMDP*AISVTY Trigger: ATACGTGACAGAAATGGCTCAGGGATCCATTGGTGG...CAGCTTCAGGAAAAACACGTATAGAGGAAAGAAACTTAAAGTGGGGCTTTCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000170909.2 ENSMUST00000209396.2 ENSMUST00000209885.2 |
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| CDS-3UTR GCA 90 bp | ATATGGCGCTTGTTAAACAGTAGAGCTGTGCTACTGGCTTGGTTCTTTGGACACGTGCCAATCACCACTTaGTGTGTGATATTGACATTG | + |
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Preference number: 4 (lower is better) Translates to: IWRLLNSRAVLLAWFFGHVPITT*CVILTL Trigger: CAATGTCAATATCACACAGCAAGTGGTGATTGGCAC...GTGTCCAAAGAACCAAGCCAGTAGCACAGCTCTACTGTTTAACAAGCGCCATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209885.2 ENSMUST00000210501.2 |
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| CDS-3UTR CAA 90 bp | GCAGCTAGGCTCAAACTGCGCACACTCCTCCTCACTTGGAGCTGCACATCTAACAAGTGGATGACAGAGTaGGGAGGAGGCGGCCTGCGG | + |
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Preference number: 5 (lower is better) Translates to: AARLKLRTLLLTWSCTSNKWMTE*GGGGLR Trigger: CCGCAGGCCGCCTCCTCCCAACTCTGTCATCCACTT...GTTAGATGTGCAGCTCCAAGTGAGGAGGAGTGTGCGCAGTTTGAGCCTAGCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170909.2 ENSMUST00000209396.2 ENSMUST00000209885.2 |
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| CDS-3UTR CAA 90 bp | GAAAACTTCATCCTAAAGCCTGGCTGTCCACCACCTGGGTGCTGGACATCGGAGTGCTTCCCAAGTGTGTaGACTGTGGACGGGTGGACG | + |
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Preference number: 5 (lower is better) Translates to: ENFILKPGCPPPGCWTSECFPSV*TVDGWT Trigger: CGTCCACCCGTCCACAGTCAACACACTTGGGAAGCA...CTCCGATGTCCAGCACCCAGGTGGTGGACAGCCAGGCTTTAGGATGAAGTTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209885.2 ENSMUST00000210501.2 |
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| CDS-3UTR CAA 90 bp | CTCCTCCTCACTTGGAGCTGCACATCTAACTCCAGAACTCGCGGGTATCTTCTTAAGTGGATGACAGAGTaGGGAGGAGGCGGCCTGCGG | + |
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Preference number: 5 (lower is better) Translates to: LLLTWSCTSNSRTRGYLLKWMTE*GGGGLR Trigger: CCGCAGGCCGCCTCCTCCCAACTCTGTCATCCACTT...AAGAAGATACCCGCGAGTTCTGGAGTTAGATGTGCAGCTCCAAGTGAGGAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170909.2 ENSMUST00000209396.2 ENSMUST00000209885.2 |
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| CDS-3UTR CAA 90 bp | AGAGGCTCTGCATTAGCACGCTGGCTTCACAACACATCCGCAGCTAGGCTCAAATGCTTCCCAAGTGTGTaGACTGTGGACGGGTGGACG | + |
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Preference number: 5 (lower is better) Translates to: RGSALARWLHNTSAARLKCFPSV*TVDGWT Trigger: CGTCCACCCGTCCACAGTCAACACACTTGGGAAGCA...TTTGAGCCTAGCTGCGGATGTGTTGTGAAGCCAGCGTGCTAATGCAGAGCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170909.2 ENSMUST00000209885.2 ENSMUST00000210501.2 |
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| CDS-3UTR CAA 90 bp | CGCACACTCCTCCTCACTTGGAGCTGCACATCTAACTCCAGAACTCGCGGGTATTGTGACTGCTTCTGTTaGATCCTCTCCAGCCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: RTLLLTWSCTSNSRTRGYCDCFC*ILSSLL Trigger: GAGGAGGCTGGAGAGGATCAAACAGAAGCAGTCACA...ATACCCGCGAGTTCTGGAGTTAGATGTGCAGCTCCAAGTGAGGAGGAGTGTGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170909.2 ENSMUST00000209396.2 ENSMUST00000209885.2 |
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| CDS-3UTR CAA 90 bp | CCTTTAAATGTCAGGGAAGATGGACAGACATCCGAAGGGCAGAAATCAGCATGGTGCTTCCCAAGTGTGTaGACTGTGGACGGGTGGACG | + |
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Preference number: 5 (lower is better) Translates to: PLNVREDGQTSEGQKSAWCFPSV*TVDGWT Trigger: CGTCCACCCGTCCACAGTCAACACACTTGGGAAGCA...CCATGCTGATTTCTGCCCTTCGGATGTCTGTCCATCTTCCCTGACATTTAAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210501.2 |
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| CDS-3UTR CAA 90 bp | ACAGAAAGCCCCACTTTAAGTTTCTTTCCTCTATACGTGTTTTTCCTGAAGCTGTGTGACTGCTTCTGTTaGATCCTCTCCAGCCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: TESPTLSFFPLYVFFLKLCDCFC*ILSSLL Trigger: GAGGAGGCTGGAGAGGATCAAACAGAAGCAGTCACA...CAGCTTCAGGAAAAACACGTATAGAGGAAAGAAACTTAAAGTGGGGCTTTCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000170909.2 ENSMUST00000209396.2 ENSMUST00000209885.2 |
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