Pregenerated sensors for TFCP2L1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026380Ensembl transcript IDs: ENSMUST00000027629.10
Found 220 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGCCAGGAAAAACGACAGAACAGAGGGGCATCATCCAGTCCTGCTaGCAGGAGGAGAGGAGGGAAGTGGCCGTAAGAGCAGTAGACCCA | + |
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Preference number: 1 (lower is better) Translates to: VPGKTTEQRGIIQSC*QEERREVAVRAVDP Trigger: TGGGTCTACTGCTCTTACGGCCACTTCCCTCCTCTCCTCCTGTCAGCAGGACTGGATGATGCCCCTCTGTTCTGTCGTTTTTCCTGGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR CCA 90 bp | GAGGCGGAGAAGCAGCTAAGGAGAGCTGGCCTTGGGAAAGGAGTCTaGGTACTTCCTAGAGTCTCACTGCTCTTTGGGCCCAGTAGTCCT | + |
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Preference number: 1 (lower is better) Translates to: EAEKQLRRAGLGKGV*VLPRVSLLFGPSSP Trigger: AGGACTACTGGGCCCAAAGAGCAGTGAGACTCTAGGAAGTACCCAGACTCCTTTCCCAAGGCCAGCTCTCCTTAGCTGCTTCTCCGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR TCA 90 bp | CTGGGATGGTGCCCAGGGCCTCATACTTGCCAGGGAGGGATCTACTaGGACATACCCCAACCCAAATGTCTAGAATGGATGGTCAAGGCC | + |
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Preference number: 1 (lower is better) Translates to: LGWCPGPHTCQGGIY*DIPQPKCLEWMVKA Trigger: GGCCTTGACCATCCATTCTAGACATTTGGGTTGGGGTATGTCTCAGTAGATCCCTCCCTGGCAAGTATGAGGCCCTGGGCACCATCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR TCA 90 bp | AAGGAAGGGAACACAGACCTCTTCACTCCAGTCCTTAGAACAGCCTaGAGGCCCAGGTTAGAGACCCTTTACAGCAGTGCCTGCAGGGGC | + |
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Preference number: 1 (lower is better) Translates to: KEGNTDLFTPVLRTA*RPRLETLYSSACRG Trigger: GCCCCTGCAGGCACTGCTGTAAAGGGTCTCTAACCTGGGCCTTCAGGCTGTTCTAAGGACTGGAGTGAAGAGGTCTGTGTTCCCTTCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR CCA 90 bp | TCCCTGGGGAACACCACACTCTGCCCCACAAGTACTGTAGAAATCTaGGTCCAGGGAAGGCAGGAAGCTGCCCAGAAATCACAACCACAC | + |
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Preference number: 1 (lower is better) Translates to: SLGNTTLCPTSTVEI*VQGRQEAAQKSQPH Trigger: GTGTGGTTGTGATTTCTGGGCAGCTTCCTGCCTTCCCTGGACCCAGATTTCTACAGTACTTGTGGGGCAGAGTGTGGTGTTCCCCAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR TCA 90 bp | TGGTTGTCTGTAGCTTTCCTGGTCTGGGTAGAGTCCCTCCTAGTCTaGGCTTGTCAGGTGAGACAGCAGCTGACAGTGGTGCACCTTTCA | + |
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Preference number: 1 (lower is better) Translates to: WLSVAFLVWVESLLV*ACQVRQQLTVVHLS Trigger: TGAAAGGTGCACCACTGTCAGCTGCTGTCTCACCTGACAAGCTCAGACTAGGAGGGACTCTACCCAGACCAGGAAAGCTACAGACAACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR GCA 90 bp | CCCCACAAGTACTGTAGAAATCTGGGTCCAGGGAAGGCAGGAAGCTaGCCAGAAATCACAACCACACAGGAAGGGTCTAGCATATATGGG | + |
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Preference number: 1 (lower is better) Translates to: PHKYCRNLGPGKAGS*PEITTTQEGSSIYG Trigger: CCCATATATGCTAGACCCTTCCTGTGTGGTTGTGATTTCTGGGCAGCTTCCTGCCTTCCCTGGACCCAGATTTCTACAGTACTTGTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR CCA 90 bp | AGAAGTTCAATTTTCCTCTTCTACTTAGTGACTTCGAGGCCAGGCTaGACTATACGGAAGAAGAAGGGGGAGGGAGAGAGGACAGGCGGG | + |
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Preference number: 1 (lower is better) Translates to: RSSIFLFYLVTSRPG*TIRKKKGEGERTGG Trigger: CCCGCCTGTCCTCTCTCCCTCCCCCTTCTTCTTCCGTATAGTCCAGCCTGGCCTCGAAGTCACTAAGTAGAAGAGGAAAATTGAACTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR CCA 90 bp | TGGCTTCTCTTCCAAAGGACCAAGCTTCAATTCCCAGCACCCACATaGCAGCTCACACCTGCTTGCAACTCCAGTTCCAGAAGATCTAAC | + |
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Preference number: 1 (lower is better) Translates to: WLLFQRTKLQFPAPT*QLTPACNSSSRRSN Trigger: GTTAGATCTTCTGGAACTGGAGTTGCAAGCAGGTGTGAGCTGCCATGTGGGTGCTGGGAATTGAAGCTTGGTCCTTTGGAAGAGAAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR TCA 90 bp | GTAGTTATCACAGGGAAAGGAGCCTCCCCTGAGGAAATGCCTCCATaGGATCCAGAATTTTCTCAATTAGTGATCAAAGGCGGGAGGGCC | + |
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Preference number: 1 (lower is better) Translates to: VVITGKGASPEEMPP*DPEFSQLVIKGGRA Trigger: GGCCCTCCCGCCTTTGATCACTAATTGAGAAAATTCTGGATCTCATGGAGGCATTTCCTCAGGGGAGGCTCCTTTCCCTGTGATAACTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR GCA 90 bp | ACCAAGCTTCAATTCCCAGCACCCACATGGCAGCTCACACCTGCTTaGAACTCCAGTTCCAGAAGATCTAACACCCTTACAAGGATCTGT | + |
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Preference number: 1 (lower is better) Translates to: TKLQFPAPTWQLTPA*NSSSRRSNTLTRIC Trigger: ACAGATCCTTGTAAGGGTGTTAGATCTTCTGGAACTGGAGTTGCAAGCAGGTGTGAGCTGCCATGTGGGTGCTGGGAATTGAAGCTTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR CCA 90 bp | AGAGACCTCTGTACTCTCTCTCATGGAAAGGCTGGGCATAGTCCCTaGGAGCCAAGTGAGGATCAGAACTTTCCAGAAGTGAGATACACA | + |
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Preference number: 1 (lower is better) Translates to: RDLCTLSHGKAGHSP*EPSEDQNFPEVRYT Trigger: TGTGTATCTCACTTCTGGAAAGTTCTGATCCTCACTTGGCTCCCAGGGACTATGCCCAGCCTTTCCATGAGAGAGAGTACAGAGGTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR TCA 90 bp | TTATCAAGTCATCCAAGAACAGGAGAGACATGGCTACCAGGGTCCTaGGAAAGGAAGTCAGTATTAGGAGGAGAACTGTGTGTGGAGCCC | + |
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Preference number: 1 (lower is better) Translates to: LSSHPRTGETWLPGS*ERKSVLGGELCVEP Trigger: GGGCTCCACACACAGTTCTCCTCCTAATACTGACTTCCTTTCTCAGGACCCTGGTAGCCATGTCTCTCCTGTTCTTGGATGACTTGATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR TCA 90 bp | ATACGGAAGAAGAAGGGGGAGGGAGAGAGGACAGGCGGGCAAGAATaGGAAATCACAGCAAATGTTGATGAGGAGGTGGAGAAACTAGAA | + |
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Preference number: 1 (lower is better) Translates to: IRKKKGEGERTGGQE*EITANVDEEVEKLE Trigger: TTCTAGTTTCTCCACCTCCTCATCAACATTTGCTGTGATTTCTCATTCTTGCCCGCCTGTCCTCTCTCCCTCCCCCTTCTTCTTCCGTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR CCA 90 bp | TTAGAGGATGCAGTCTTGCTGGAGGAAGTAAGTCACTGGGGTTGGTaGTCCTTGAAGGCTTGTACCATTTCCTGCTCTTGCTCTTTCTCT | + |
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Preference number: 1 (lower is better) Translates to: LEDAVLLEEVSHWGW*SLKACTISCSCSFS Trigger: AGAGAAAGAGCAAGAGCAGGAAATGGTACAAGCCTTCAAGGACCACCAACCCCAGTGACTTACTTCCTCCAGCAAGACTGCATCCTCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR CCA 90 bp | GAATTTTCTCAATTAGTGATCAAAGGCGGGAGGGCCCATTGTGGGTaGGACCATCTCTGGGCTGGTAGTCCTGTGTTCTATAAGGAAACA | + |
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Preference number: 1 (lower is better) Translates to: EFSQLVIKGGRAHCG*DHLWAGSPVFYKET Trigger: TGTTTCCTTATAGAACACAGGACTACCAGCCCAGAGATGGTCCCACCCACAATGGGCCCTCCCGCCTTTGATCACTAATTGAGAAAATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR TCA 90 bp | GCTTATGTATTTGAACACGTGGTCCCAGTTGGTGATGTAGTCTGCTaGGGTTATGGGGCTTTTAGAGGATGCAGTCTTGCTGGAGGAAGT | + |
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Preference number: 1 (lower is better) Translates to: AYVFEHVVPVGDVVC*GYGAFRGCSLAGGS Trigger: ACTTCCTCCAGCAAGACTGCATCCTCTAAAAGCCCCATAACCTCAGCAGACTACATCACCAACTGGGACCACGTGTTCAAATACATAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR GCA 90 bp | ACAATGAGAGGTCACATAGGTACACTGTGCCATCTACCATGTCAATaGAGAGACTCTGGGCTTGAATGTAGCAGATCCTTAGAGACAAGG | + |
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Preference number: 1 (lower is better) Translates to: TMRGHIGTLCHLPCQ*RDSGLECSRSLETR Trigger: CCTTGTCTCTAAGGATCTGCTACATTCAAGCCCAGAGTCTCTGCATTGACATGGTAGATGGCACAGTGTACCTATGTGACCTCTCATTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR TCA 90 bp | AGTACTCTTTGCTCAACAGAAATGAGAATACACAGTAGTGGTCCATaGGGAATCATTCTGTCCTCACCTCTCTTCCCTGGTGAGGAAGTC | + |
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Preference number: 1 (lower is better) Translates to: STLCSTEMRIHSSGP*GIILSSPLFPGEEV Trigger: GACTTCCTCACCAGGGAAGAGAGGTGAGGACAGAATGATTCCTCATGGACCACTACTGTGTATTCTCATTTCTGTTGAGCAAAGAGTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR CCA 90 bp | CGAGGACAAGCAAAGGTCACCTGTCCACCACATGACTTTGATGAATaGGAAACAATGGTAAAGTTTTCCCGAAGCTCAGATTCACCTACT | + |
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Preference number: 1 (lower is better) Translates to: RGQAKVTCPPHDFDE*ETMVKFSRSSDSPT Trigger: AGTAGGTGAATCTGAGCTTCGGGAAAACTTTACCATTGTTTCCCATTCATCAAAGTCATGTGGTGGACAGGTGACCTTTGCTTGTCCTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR TCA 90 bp | AAGTTACCTTATGAGCTGTCCATTCTACCAGGCACATTCCCAAAATaGAACCCTGTCCACAGAAAGCCTGTGCCAATATATTCACGACAC | + |
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Preference number: 1 (lower is better) Translates to: KLPYELSILPGTFPK*NPVHRKPVPIYSRH Trigger: GTGTCGTGAATATATTGGCACAGGCTTTCTGTGGACAGGGTTTCATTTTGGGAATGTGCCTGGTAGAATGGACAGCTCATAAGGTAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR TCA 90 bp | ATGGGAAACAATGGTAAAGTTTTCCCGAAGCTCAGATTCACCTACTaGCTAGTTTCCAGGTTCTCAGGTCTCCAGATCAATGCTTCTTGT | + |
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Preference number: 1 (lower is better) Translates to: MGNNGKVFPKLRFTY*LVSRFSGLQINASC Trigger: ACAAGAAGCATTGATCTGGAGACCTGAGAACCTGGAAACTAGTCAGTAGGTGAATCTGAGCTTCGGGAAAACTTTACCATTGTTTCCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR CCA 90 bp | AAACTTAAAAACCTAAAAGCCAAGAGGAAAGGAGAAGGGAACCGCTaGCTTTCTTCTGTACACCAGACTTTGTGTCCATGGTTGTCTGTA | + |
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Preference number: 1 (lower is better) Translates to: KLKNLKAKRKGEGNR*LSSVHQTLCPWLSV Trigger: TACAGACAACCATGGACACAAAGTCTGGTGTACAGAAGAAAGCCAGCGGTTCCCTTCTCCTTTCCTCTTGGCTTTTAGGTTTTTAAGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR CCA 90 bp | ATTCTAAGAGACTCGGTTGCCTCTCTATCCAAGCATGGAAACGTTTaGGAAACGTTTGGTCATTACCTTCCTCTAGAACTAGGAAGTGTT | + |
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Preference number: 1 (lower is better) Translates to: ILRDSVASLSKHGNV*ETFGHYLPLELGSV Trigger: AACACTTCCTAGTTCTAGAGGAAGGTAATGACCAAACGTTTCCCAAACGTTTCCATGCTTGGATAGAGAGGCAACCGAGTCTCTTAGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR CCA 90 bp | AAGAAGGTAGGTGAGAACACCTCAAGAAAGAGTCACATCAAAGCATaGAAGAACATGGTAAGTAAGCAAGACTTTACCCAGCAGGAAGAG | + |
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Preference number: 1 (lower is better) Translates to: KKVGENTSRKSHIKA*KNMVSKQDFTQQEE Trigger: CTCTTCCTGCTGGGTAAAGTCTTGCTTACTTACCATGTTCTTCCATGCTTTGATGTGACTCTTTCTTGAGGTGTTCTCACCTACCTTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR CCA 90 bp | TATGCTTTATTTCAGGTACAAAAACAACATGGCATTATGACAACGTaGGTTTCCATGACTCCCTTTCCCGTGACCTGCCACACATATTTG | + |
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Preference number: 1 (lower is better) Translates to: YALFQVQKQHGIMTT*VSMTPFPVTCHTYL Trigger: CAAATATGTGTGGCAGGTCACGGGAAAGGGAGTCATGGAAACCCACGTTGTCATAATGCCATGTTGTTTTTGTACCTGAAATAAAGCATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR TCA 90 bp | AACTTTCCACTGACAACAGCTAAAGAGTCTTTCTATTTCTTCCACTaGTGTGTTAATAATTTTCAGAACTCCAGCTACTTGGGCCAGCCC | + |
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Preference number: 1 (lower is better) Translates to: NFPLTTAKESFYFFH*CVNNFQNSSYLGQP Trigger: GGGCTGGCCCAAGTAGCTGGAGTTCTGAAAATTATTAACACATCAGTGGAAGAAATAGAAAGACTCTTTAGCTGTTGTCAGTGGAAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR CCA 90 bp | CATGTTTTGAATGTGACCCGTTCCATGCAGTCAGGTATAGAATTCTaGATTTGGAAAACAGGATGTGTAACTTCCTGTAGTTTAAGGACC | + |
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Preference number: 1 (lower is better) Translates to: HVLNVTRSMQSGIEF*IWKTGCVTSCSLRT Trigger: GGTCCTTAAACTACAGGAAGTTACACATCCTGTTTTCCAAATCCAGAATTCTATACCTGACTGCATGGAACGGGTCACATTCAAAACATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR TCA 90 bp | ATTGTCAACTTGATGGGACTTAGTATCACCATGGAAATAAACCTCTaGCTATGTCTGCCAGTGAGTTTCTTTTCTATTCCTTTAATTCAC | + |
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Preference number: 1 (lower is better) Translates to: IVNLMGLSITMEINL*LCLPVSFFSIPLIH Trigger: GTGAATTAAAGGAATAGAAAAGAAACTCACTGGCAGACATAGTCAGAGGTTTATTTCCATGGTGATACTAAGTCCCATCAAGTTGACAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR-3UTR CCA 90 bp | CACCCAGCTGCAGTCAGGGAAAGCCTGGGACTTGGTGAGCAGGCATCCATCCACAGGGCCCATTGTGGGTaGGACCATCTCTGGGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: HPAAVRESLGLGEQASIHRAHCG*DHLWAG Trigger: ACCAGCCCAGAGATGGTCCCACCCACAATGGGCCCT...GTGGATGGATGCCTGCTCACCAAGTCCCAGGCTTTCCCTGACTGCAGCTGGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR-3UTR CCA 90 bp | CACCCAGCTGCAGTCAGGGAAAGCCTGGGACTTGGTGAGCAGGCATCCATCCACAGTCACTGGGGTTGGTaGTCCTTGAAGGCTTGTACC | + |
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Preference number: 2 (lower is better) Translates to: HPAAVRESLGLGEQASIHSHWGW*SLKACT Trigger: GGTACAAGCCTTCAAGGACCACCAACCCCAGTGACT...GTGGATGGATGCCTGCTCACCAAGTCCCAGGCTTTCCCTGACTGCAGCTGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR-3UTR CCA 90 bp | TCAATTCCCAGCACCCACATGGCAGCTCACACCTGCTTGCAACTCCAGTTCCAGGCTGTAGCGCTGGGATaGTGCCCAGGGCCTCATACT | + |
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Preference number: 2 (lower is better) Translates to: SIPSTHMAAHTCLQLQFQAVALG*CPGPHT Trigger: AGTATGAGGCCCTGGGCACCATCCCAGCGCTACAGC...CTGGAACTGGAGTTGCAAGCAGGTGTGAGCTGCCATGTGGGTGCTGGGAATTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR-3UTR TCA 90 bp | CTGCTTCCAGCTGTCCCATGCTCTGGCTGCCAAGACTTCTCAGCCACGACAAACATCATCCAGTCCTGCTaGCAGGAGGAGAGGAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: LLPAVPCSGCQDFSATTNIIQSC*QEERRE Trigger: TTCCCTCCTCTCCTCCTGTCAGCAGGACTGGATGAT...GTTTGTCGTGGCTGAGAAGTCTTGGCAGCCAGAGCATGGGACAGCTGGAAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR-3UTR CCA 90 bp | CACCCAGCTGCAGTCAGGGAAAGCCTGGGACTTGGTGAGCAGGCATCCATCCACGCCTCAGCTGAGTACTaGGAGTGCTGGTTCATACTA | + |
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Preference number: 2 (lower is better) Translates to: HPAAVRESLGLGEQASIHASAEY*ECWFIL Trigger: TAGTATGAACCAGCACTCCCAGTACTCAGCTGAGGC...GTGGATGGATGCCTGCTCACCAAGTCCCAGGCTTTCCCTGACTGCAGCTGGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR CAA 90 bp | GTCTGTAGCTTTCCTGGTCTGGGTAGAGTCCCTCCTAGTCTGAGCTaGTCAGGTGAGACAGCAGCTGACAGTGGTGCACCTTTCACAGCC | + |
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Preference number: 2 (lower is better) Translates to: VCSFPGLGRVPPSLS*SGETAADSGAPFTA Trigger: GGCTGTGAAAGGTGCACCACTGTCAGCTGCTGTCTCACCTGACAAGCTCAGACTAGGAGGGACTCTACCCAGACCAGGAAAGCTACAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR-3UTR GCA 90 bp | TCTCTCATGGAAAGGCTGGGCATAGTCCCTGGGAGCCAAGTGAGGATCAGAACTGTCCCATGCTCTGGCTaGCAAGACTTCTCAGCCACG | + |
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Preference number: 2 (lower is better) Translates to: SLMERLGIVPGSQVRIRTVPCSG*QDFSAT Trigger: CGTGGCTGAGAAGTCTTGGCAGCCAGAGCATGGGAC...AGTTCTGATCCTCACTTGGCTCCCAGGGACTATGCCCAGCCTTTCCATGAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR-3UTR CCA 90 bp | CTGCTTCCAGCTGTCCCATGCTCTGGCTGCCAAGACTTCTCAGCCACGACAAACCTGCGTGGGAAACACTaGGCAGTTTCTCAAACCGGT | + |
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Preference number: 2 (lower is better) Translates to: LLPAVPCSGCQDFSATTNLRGKH*AVSQTG Trigger: ACCGGTTTGAGAAACTGCCCAGTGTTTCCCACGCAG...GTTTGTCGTGGCTGAGAAGTCTTGGCAGCCAGAGCATGGGACAGCTGGAAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR-3UTR CCA 90 bp | TCAATTCCCAGCACCCACATGGCAGCTCACACCTGCTTGCAACTCCAGTTCCAGTCTTACTATGTAGGTTaGGCTGGCCTCGGGAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: SIPSTHMAAHTCLQLQFQSYYVG*AGLGSL Trigger: GAGGCTCCCGAGGCCAGCCCAACCTACATAGTAAGA...CTGGAACTGGAGTTGCAAGCAGGTGTGAGCTGCCATGTGGGTGCTGGGAATTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR-3UTR CCA 90 bp | CACCCAGCTGCAGTCAGGGAAAGCCTGGGACTTGGTGAGCAGGCATCCATCCACCCCCAAGACAAGACTTaGAACATTCCATGCCATCTG | + |
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Preference number: 2 (lower is better) Translates to: HPAAVRESLGLGEQASIHPQDKT*NIPCHL Trigger: CAGATGGCATGGAATGTTCCAAGTCTTGTCTTGGGG...GTGGATGGATGCCTGCTCACCAAGTCCCAGGCTTTCCCTGACTGCAGCTGGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR-3UTR TCA 90 bp | TCTCTCATGGAAAGGCTGGGCATAGTCCCTGGGAGCCAAGTGAGGATCAGAACTGAAAGACCAGCTCCTTaGTCATGGACTCTCCCCTGC | + |
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Preference number: 2 (lower is better) Translates to: SLMERLGIVPGSQVRIRTERPAP*SWTLPC Trigger: GCAGGGGAGAGTCCATGATCAAGGAGCTGGTCTTTC...AGTTCTGATCCTCACTTGGCTCCCAGGGACTATGCCCAGCCTTTCCATGAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR-3UTR TCA 90 bp | CACCCAGCTGCAGTCAGGGAAAGCCTGGGACTTGGTGAGCAGGCATCCATCCACGTGTACCTAAGGCAGTaGCCATATTCAATTCCCCTT | + |
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Preference number: 2 (lower is better) Translates to: HPAAVRESLGLGEQASIHVYLRQ*PYSIPL Trigger: AAGGGGAATTGAATATGGTCACTGCCTTAGGTACAC...GTGGATGGATGCCTGCTCACCAAGTCCCAGGCTTTCCCTGACTGCAGCTGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR-3UTR TCA 90 bp | TCAATTCCCAGCACCCACATGGCAGCTCACACCTGCTTGCAACTCCAGTTCCAGAAGCAGGAATCAGGGTaGCATAAGAGAGGAGACAGG | + |
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Preference number: 2 (lower is better) Translates to: SIPSTHMAAHTCLQLQFQKQESG*HKRGDR Trigger: CCTGTCTCCTCTCTTATGTCACCCTGATTCCTGCTT...CTGGAACTGGAGTTGCAAGCAGGTGTGAGCTGCCATGTGGGTGCTGGGAATTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR-3UTR TCA 90 bp | TCAATTCCCAGCACCCACATGGCAGCTCACACCTGCTTGCAACTCCAGTTCCAGACCTCTCTTCCCTGGTaGGGAAGTCACATGTCATCT | + |
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Preference number: 2 (lower is better) Translates to: SIPSTHMAAHTCLQLQFQTSLPW*GSHMSS Trigger: AGATGACATGTGACTTCCTCACCAGGGAAGAGAGGT...CTGGAACTGGAGTTGCAAGCAGGTGTGAGCTGCCATGTGGGTGCTGGGAATTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR-3UTR GCA 90 bp | CTGCTTCCAGCTGTCCCATGCTCTGGCTGCCAAGACTTCTCAGCCACGACAAACCACATCCCCACTATCTaGCCAGGAAACAGAACAAGA | + |
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Preference number: 2 (lower is better) Translates to: LLPAVPCSGCQDFSATTNHIPTI*PGNRTR Trigger: TCTTGTTCTGTTTCCTGGGCAGATAGTGGGGATGTG...GTTTGTCGTGGCTGAGAAGTCTTGGCAGCCAGAGCATGGGACAGCTGGAAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR-3UTR GCA 90 bp | TCTCTCATGGAAAGGCTGGGCATAGTCCCTGGGAGCCAAGTGAGGATCAGAACTACAAACACGTGTAGCTaGGTGGGAAACACTGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: SLMERLGIVPGSQVRIRTTNTCS*VGNTGQ Trigger: CTGCCCAGTGTTTCCCACGCAGCTACACGTGTTTGT...AGTTCTGATCCTCACTTGGCTCCCAGGGACTATGCCCAGCCTTTCCATGAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR-3UTR GCA 90 bp | TCTCTCATGGAAAGGCTGGGCATAGTCCCTGGGAGCCAAGTGAGGATCAGAACTGGGGCTTTTAGAGGATaGAGTCTTGCTGGAGGAAGT | + |
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Preference number: 2 (lower is better) Translates to: SLMERLGIVPGSQVRIRTGAFRG*SLAGGS Trigger: ACTTCCTCCAGCAAGACTGCATCCTCTAAAAGCCCC...AGTTCTGATCCTCACTTGGCTCCCAGGGACTATGCCCAGCCTTTCCATGAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR-3UTR CCA 90 bp | TCCACAGAAAGCCTGTGCCAATATATTCACGACACCAACATCTCAATAAAGCTGACAGCCAGGGATCCATaGGGCAGGGGACAGGTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: STESLCQYIHDTNISIKLTARDP*GRGQVQ Trigger: CTGCACCTGTCCCCTGCCCCATGGATCCCTGGCTGT...CAGCTTTATTGAGATGTTGGTGTCGTGAATATATTGGCACAGGCTTTCTGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR CCA 90 bp | CCTAAGGCAGTGACCATATTCAATTCCCCTTGCCCCCAACAACCTCAACTTTCCGGAGAAGGGAACCGCTaGCTTTCTTCTGTACACCAG | + |
|
Preference number: 2 (lower is better) Translates to: PKAVTIFNSPCPQQPQLSGEGNR*LSSVHQ Trigger: CTGGTGTACAGAAGAAAGCCAGCGGTTCCCTTCTCC...GGAAAGTTGAGGTTGTTGGGGGCAAGGGGAATTGAATATGGTCACTGCCTTAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR CCA 90 bp | GTGGGTTTCCATGACTCCCTTTCCCGTGACCTGCCACACATATTTGACCAGTCTGTAAGTCACTGGGGTTaGTGGTCCTTGAAGGCTTGT | + |
|
Preference number: 2 (lower is better) Translates to: VGFHDSLSRDLPHIFDQSVSHWG*WSLKAC Trigger: ACAAGCCTTCAAGGACCACCAACCCCAGTGACTTAC...AGACTGGTCAAATATGTGTGGCAGGTCACGGGAAAGGGAGTCATGGAAACCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR TCA 90 bp | GTGGGTTTCCATGACTCCCTTTCCCGTGACCTGCCACACATATTTGACCAGTCTTGGCTACCAGGGTCCTaGGAAAGGAAGTCAGTATTA | + |
|
Preference number: 2 (lower is better) Translates to: VGFHDSLSRDLPHIFDQSWLPGS*ERKSVL Trigger: TAATACTGACTTCCTTTCTCAGGACCCTGGTAGCCA...AGACTGGTCAAATATGTGTGGCAGGTCACGGGAAAGGGAGTCATGGAAACCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR TCA 90 bp | CTGCTTCCAGCTGTCCCATGCTCTGGCTGCCAAGACTTCTCAGCCACGACAAACAAACACAGATTTTCCTaGGTTTGCATTAGGTCATGG | + |
|
Preference number: 2 (lower is better) Translates to: LLPAVPCSGCQDFSATTNKHRFS*VCIRSW Trigger: CCATGACCTAATGCAAACTCAGGAAAATCTGTGTTT...GTTTGTCGTGGCTGAGAAGTCTTGGCAGCCAGAGCATGGGACAGCTGGAAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR CAA 90 bp | GCCTTGGGAAAGGAGTCTGGGTACTTCCTAGAGTCTCACTGCTCTTaGGGCCCAGTAGTCCTATCTTCAAAGGACAAAGAGATTGGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: ALGKESGYFLESHCS*GPVVLSSKDKEIGR Trigger: TCTTCCAATCTCTTTGTCCTTTGAAGATAGGACTACTGGGCCCAAAGAGCAGTGAGACTCTAGGAAGTACCCAGACTCCTTTCCCAAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR TCA 90 bp | GTGGGTTTCCATGACTCCCTTTCCCGTGACCTGCCACACATATTTGACCAGTCTCAGATAGACAAGCTATaGAAGATGAACATCCCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: VGFHDSLSRDLPHIFDQSQIDKL*KMNIPG Trigger: CCCAGGGATGTTCATCTTTCATAGCTTGTCTATCTG...AGACTGGTCAAATATGTGTGGCAGGTCACGGGAAAGGGAGTCATGGAAACCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR CCA 90 bp | CTGCTTCCAGCTGTCCCATGCTCTGGCTGCCAAGACTTCTCAGCCACGACAAACGAGAAATGTATCCCATaGGCTTATGTATTTGAACAC | + |
|
Preference number: 2 (lower is better) Translates to: LLPAVPCSGCQDFSATTNEKCIP*AYVFEH Trigger: GTGTTCAAATACATAAGCCCATGGGATACATTTCTC...GTTTGTCGTGGCTGAGAAGTCTTGGCAGCCAGAGCATGGGACAGCTGGAAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR TCA 90 bp | TGCGTGGGAAACACTGGGCAGTTTCTCAAACCGGTGAAAAGTTACCTTATGAGCGTCTACCATAGCTACTaGTCCTCAAATTCCCCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: CVGNTGQFLKPVKSYLMSVYHSY*SSNSPR Trigger: TCTGGGGGAATTTGAGGATCAGTAGCTATGGTAGAC...GCTCATAAGGTAACTTTTCACCGGTTTGAGAAACTGCCCAGTGTTTCCCACGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR TCA 90 bp | CCTAAGGCAGTGACCATATTCAATTCCCCTTGCCCCCAACAACCTCAACTTTCCCAAAAGACAAGGAACTaGGAGCTCATCTTTCCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: PKAVTIFNSPCPQQPQLSQKTRN*ELIFPV Trigger: CACAGGAAAGATGAGCTCTCAGTTCCTTGTCTTTTG...GGAAAGTTGAGGTTGTTGGGGGCAAGGGGAATTGAATATGGTCACTGCCTTAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR TCA 90 bp | TCTCTCATGGAAAGGCTGGGCATAGTCCCTGGGAGCCAAGTGAGGATCAGAACTAATGTGAAGAGACATTaGACATCATTAGCCAGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: SLMERLGIVPGSQVRIRTNVKRH*TSLARD Trigger: GTCTCTGGCTAATGATGTTCAATGTCTCTTCACATT...AGTTCTGATCCTCACTTGGCTCCCAGGGACTATGCCCAGCCTTTCCATGAGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR TCA 90 bp | GTGGGTTTCCATGACTCCCTTTCCCGTGACCTGCCACACATATTTGACCAGTCTACCTCAACTTTCCACTaGCAACAGCTAAAGAGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: VGFHDSLSRDLPHIFDQSTSTFH*QQLKSL Trigger: AAGACTCTTTAGCTGTTGTCAGTGGAAAGTTGAGGT...AGACTGGTCAAATATGTGTGGCAGGTCACGGGAAAGGGAGTCATGGAAACCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR GCA 90 bp | TGCGTGGGAAACACTGGGCAGTTTCTCAAACCGGTGAAAAGTTACCTTATGAGCACCATTTCCTGCTCTTaGTCTTTCTCTCTGTGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: CVGNTGQFLKPVKSYLMSTISCS*SFSLCC Trigger: GCAGCACAGAGAGAAAGAGCAAGAGCAGGAAATGGT...GCTCATAAGGTAACTTTTCACCGGTTTGAGAAACTGCCCAGTGTTTCCCACGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR GCA 90 bp | CTGCTTCCAGCTGTCCCATGCTCTGGCTGCCAAGACTTCTCAGCCACGACAAACCCTCTTAGTACTCTTTaGTCAACAGAAATGAGAATA | + |
|
Preference number: 2 (lower is better) Translates to: LLPAVPCSGCQDFSATTNPLSTL*STEMRI Trigger: TATTCTCATTTCTGTTGAGCAAAGAGTACTAAGAGG...GTTTGTCGTGGCTGAGAAGTCTTGGCAGCCAGAGCATGGGACAGCTGGAAGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR CCA 90 bp | TCTCTCATGGAAAGGCTGGGCATAGTCCCTGGGAGCCAAGTGAGGATCAGAACTCAGAATGGAGCAGAATaGAGAAAAACTGATGAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: SLMERLGIVPGSQVRIRTQNGAE*RKTDEG Trigger: TCCTTCATCAGTTTTTCTCCATTCTGCTCCATTCTG...AGTTCTGATCCTCACTTGGCTCCCAGGGACTATGCCCAGCCTTTCCATGAGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR CCA 90 bp | TTCCATGCAGTCAGGTATAGAATTCTGGATTTGGAAAACAGGATGTGTAACTTCCTATGTAGGTTGGGCTaGCCTCGGGAGCCTCAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: FHAVRYRILDLENRMCNFLCRLG*PREPQL Trigger: CAGCTGAGGCTCCCGAGGCCAGCCCAACCTACATAG...GAAGTTACACATCCTGTTTTCCAAATCCAGAATTCTATACCTGACTGCATGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR TCA 90 bp | CCTAAGGCAGTGACCATATTCAATTCCCCTTGCCCCCAACAACCTCAACTTTCCGAGGAAATGCCTCCATaGGATCCAGAATTTTCTCAA | + |
|
Preference number: 2 (lower is better) Translates to: PKAVTIFNSPCPQQPQLSEEMPP*DPEFSQ Trigger: TTGAGAAAATTCTGGATCTCATGGAGGCATTTCCTC...GGAAAGTTGAGGTTGTTGGGGGCAAGGGGAATTGAATATGGTCACTGCCTTAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR GCA 90 bp | TGCGTGGGAAACACTGGGCAGTTTCTCAAACCGGTGAAAAGTTACCTTATGAGCCATCTACCATGTCAATaGAGAGACTCTGGGCTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: CVGNTGQFLKPVKSYLMSHLPCQ*RDSGLE Trigger: TTCAAGCCCAGAGTCTCTGCATTGACATGGTAGATG...GCTCATAAGGTAACTTTTCACCGGTTTGAGAAACTGCCCAGTGTTTCCCACGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR GCA 90 bp | CCTAAGGCAGTGACCATATTCAATTCCCCTTGCCCCCAACAACCTCAACTTTCCCTTTCCTCCCCAAGTTaGTTCTTGGTCATGATGTTT | + |
|
Preference number: 2 (lower is better) Translates to: PKAVTIFNSPCPQQPQLSLSSPS*FLVMMF Trigger: AAACATCATGACCAAGAAGCAACTTGGGGAGGAAAG...GGAAAGTTGAGGTTGTTGGGGGCAAGGGGAATTGAATATGGTCACTGCCTTAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR CCA 90 bp | TCCACAGAAAGCCTGTGCCAATATATTCACGACACCAACATCTCAATAAAGCTGACACCATACTACCCCTaGGCCACTTGGCAAACAGCA | + |
|
Preference number: 2 (lower is better) Translates to: STESLCQYIHDTNISIKLTPYYP*ATWQTA Trigger: TGCTGTTTGCCAAGTGGCCCAGGGGTAGTATGGTGT...CAGCTTTATTGAGATGTTGGTGTCGTGAATATATTGGCACAGGCTTTCTGTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR CCA 90 bp | TCTCTCATGGAAAGGCTGGGCATAGTCCCTGGGAGCCAAGTGAGGATCAGAACTGTTTGCATTAGGTCATaGTTTCTTAGTATCCACATC | + |
|
Preference number: 2 (lower is better) Translates to: SLMERLGIVPGSQVRIRTVCIRS*FLSIHI Trigger: GATGTGGATACTAAGAAACCATGACCTAATGCAAAC...AGTTCTGATCCTCACTTGGCTCCCAGGGACTATGCCCAGCCTTTCCATGAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR TCA 90 bp | TTCCATGCAGTCAGGTATAGAATTCTGGATTTGGAAAACAGGATGTGTAACTTCATAGCAGCACATCACTaGGGCCCACACCTACACACC | + |
|
Preference number: 2 (lower is better) Translates to: FHAVRYRILDLENRMCNFIAAHH*GPHLHT Trigger: GGTGTGTAGGTGTGGGCCTCAGTGATGTGCTGCTAT...GAAGTTACACATCCTGTTTTCCAAATCCAGAATTCTATACCTGACTGCATGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR TCA 90 bp | TTCCATGCAGTCAGGTATAGAATTCTGGATTTGGAAAACAGGATGTGTAACTTCGTCCTTAGAACAGCCTaGAGGCCCAGGTTAGAGACC | + |
|
Preference number: 2 (lower is better) Translates to: FHAVRYRILDLENRMCNFVLRTA*RPRLET Trigger: GGTCTCTAACCTGGGCCTTCAGGCTGTTCTAAGGAC...GAAGTTACACATCCTGTTTTCCAAATCCAGAATTCTATACCTGACTGCATGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR GCA 90 bp | TTCCATGCAGTCAGGTATAGAATTCTGGATTTGGAAAACAGGATGTGTAACTTCCTTCCAGCTGTCCCATaGTCTGGCTGCCAAGACTTC | + |
|
Preference number: 2 (lower is better) Translates to: FHAVRYRILDLENRMCNFLPAVP*SGCQDF Trigger: GAAGTCTTGGCAGCCAGAGCATGGGACAGCTGGAAG...GAAGTTACACATCCTGTTTTCCAAATCCAGAATTCTATACCTGACTGCATGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR GCA 90 bp | ATATGCTGCACACATGACCCAAGGGTAATTTTGTTTGTAGCATATCCATGTTTTCCACTCGGGTTTACCTaGAGCTGCAGCAGCACTGGT | + |
|
Preference number: 2 (lower is better) Translates to: ICCTHDPRVILFVAYPCFPLGFT*SCSSTG Trigger: ACCAGTGCTGCTGCAGCTGCAGGTAAACCCGAGTGG...AAAACATGGATATGCTACAAACAAAATTACCCTTGGGTCATGTGTGCAGCATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR CCA 90 bp | CCTAAGGCAGTGACCATATTCAATTCCCCTTGCCCCCAACAACCTCAACTTTCCAAGCATGGAAACGTTTaGGAAACGTTTGGTCATTAC | + |
|
Preference number: 2 (lower is better) Translates to: PKAVTIFNSPCPQQPQLSKHGNV*ETFGHY Trigger: GTAATGACCAAACGTTTCCCAAACGTTTCCATGCTT...GGAAAGTTGAGGTTGTTGGGGGCAAGGGGAATTGAATATGGTCACTGCCTTAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR CCA 90 bp | TTCCATGCAGTCAGGTATAGAATTCTGGATTTGGAAAACAGGATGTGTAACTTCAGCTGTCCCATGCTCTaGCTGCCAAGACTTCTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: FHAVRYRILDLENRMCNFSCPML*LPRLLS Trigger: GCTGAGAAGTCTTGGCAGCCAGAGCATGGGACAGCT...GAAGTTACACATCCTGTTTTCCAAATCCAGAATTCTATACCTGACTGCATGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR TCA 90 bp | TGCGTGGGAAACACTGGGCAGTTTCTCAAACCGGTGAAAAGTTACCTTATGAGCGCAAAATGTGTGGCTTaGATGAGAAATGTATCCCAT | + |
|
Preference number: 2 (lower is better) Translates to: CVGNTGQFLKPVKSYLMSAKCVA*MRNVSH Trigger: ATGGGATACATTTCTCATTCAAGCCACACATTTTGC...GCTCATAAGGTAACTTTTCACCGGTTTGAGAAACTGCCCAGTGTTTCCCACGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR TCA 90 bp | TTCCATGCAGTCAGGTATAGAATTCTGGATTTGGAAAACAGGATGTGTAACTTCGCCACAGCATTGCCCTaGGTACTGGGATTACAGGTT | + |
|
Preference number: 2 (lower is better) Translates to: FHAVRYRILDLENRMCNFATALP*VLGLQV Trigger: AACCTGTAATCCCAGTACTCAGGGCAATGCTGTGGC...GAAGTTACACATCCTGTTTTCCAAATCCAGAATTCTATACCTGACTGCATGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR CCA 90 bp | ATATGCTGCACACATGACCCAAGGGTAATTTTGTTTGTAGCATATCCATGTTTTTACCCCTGGGCCACTTaGCAAACAGCAGTGGTTAGC | + |
|
Preference number: 2 (lower is better) Translates to: ICCTHDPRVILFVAYPCFYPWAT*QTAVVS Trigger: GCTAACCACTGCTGTTTGCCAAGTGGCCCAGGGGTA...AAAACATGGATATGCTACAAACAAAATTACCCTTGGGTCATGTGTGCAGCATAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR CCA 90 bp | CCTAAGGCAGTGACCATATTCAATTCCCCTTGCCCCCAACAACCTCAACTTTCCAAAACTAACTCAGACTaGAGCAGAACTCATTGTAAC | + |
|
Preference number: 2 (lower is better) Translates to: PKAVTIFNSPCPQQPQLSKTNSD*SRTHCN Trigger: GTTACAATGAGTTCTGCTCCAGTCTGAGTTAGTTTT...GGAAAGTTGAGGTTGTTGGGGGCAAGGGGAATTGAATATGGTCACTGCCTTAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR CAA 90 bp | TATTCTAAGAGACTCGGTTGCCTCTCTATCCAAGCATGGAAACGTTaGGGAAACGTTTGGTCATTACCTTCCTCTAGAACTAGGAAGTGT | + |
|
Preference number: 2 (lower is better) Translates to: YSKRLGCLSIQAWKR*GNVWSLPSSRTRKC Trigger: ACACTTCCTAGTTCTAGAGGAAGGTAATGACCAAACGTTTCCCAAACGTTTCCATGCTTGGATAGAGAGGCAACCGAGTCTCTTAGAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR TCA 90 bp | AAAGATCCAGGAATCGGAGGTCTCCAGACTACAGAAGCTCCAGTCCTTTCAGTATTAGCTGAGGTTGTCTaGAAAAGAGAATTCAGTAAG | + |
|
Preference number: 2 (lower is better) Translates to: KDPGIGGLQTTEAPVLSVLAEVV*KREFSK Trigger: CTTACTGAATTCTCTTTTTCAGACAACCTCAGCTAA...TACTGAAAGGACTGGAGCTTCTGTAGTCTGGAGACCTCCGATTCCTGGATCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR CCA 90 bp | TTCCATGCAGTCAGGTATAGAATTCTGGATTTGGAAAACAGGATGTGTAACTTCGAGGAAGTAAGTCACTaGGGTTGGTGGTCCTTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: FHAVRYRILDLENRMCNFEEVSH*GWWSLK Trigger: CTTCAAGGACCACCAACCCCAGTGACTTACTTCCTC...GAAGTTACACATCCTGTTTTCCAAATCCAGAATTCTATACCTGACTGCATGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR CCA 90 bp | CCTAAGGCAGTGACCATATTCAATTCCCCTTGCCCCCAACAACCTCAACTTTCCCCAAAGATATACAAATaGCCAATCAATGTGAAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: PKAVTIFNSPCPQQPQLSPKIYK*PINVKR Trigger: TCTCTTCACATTGATTGGCCATTTGTATATCTTTGG...GGAAAGTTGAGGTTGTTGGGGGCAAGGGGAATTGAATATGGTCACTGCCTTAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR CAA 90 bp | CACTTGTGTTTCTGCATATGCTGCACACATGACCCAAGGGTAATTTaGTTTGTAGCATATCCATGTTTTGAATGTGACCCGTTCCATGCA | + |
|
Preference number: 2 (lower is better) Translates to: HLCFCICCTHDPRVI*FVAYPCFECDPFHA Trigger: TGCATGGAACGGGTCACATTCAAAACATGGATATGCTACAAACAAAATTACCCTTGGGTCATGTGTGCAGCATATGCAGAAACACAAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR TCA 90 bp | CTAGACTCTCCCACTACATATCATATATGTAAAACTAACTCAGACTGGAGCAGAGGTGATGTAGTCTGCTaGGGTTATGGGGCTTTTAGA | + |
|
Preference number: 2 (lower is better) Translates to: LDSPTTYHICKTNSDWSRGDVVC*GYGAFR Trigger: TCTAAAAGCCCCATAACCTCAGCAGACTACATCACC...TCTGCTCCAGTCTGAGTTAGTTTTACATATATGATATGTAGTGGGAGAGTCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR TCA 90 bp | TTCCATGCAGTCAGGTATAGAATTCTGGATTTGGAAAACAGGATGTGTAACTTCACAGCAGTGGTTAGCTaGGGTTGTCTGAAAAAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: FHAVRYRILDLENRMCNFTAVVS*GCLKKR Trigger: TCTCTTTTTCAGACAACCTCAGCTAACCACTGCTGT...GAAGTTACACATCCTGTTTTCCAAATCCAGAATTCTATACCTGACTGCATGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR CCA 90 bp | TTCCATGCAGTCAGGTATAGAATTCTGGATTTGGAAAACAGGATGTGTAACTTCCAGACTTTGTGTCCATaGTTGTCTGTAGCTTTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: FHAVRYRILDLENRMCNFQTLCP*LSVAFL Trigger: CAGGAAAGCTACAGACAACCATGGACACAAAGTCTG...GAAGTTACACATCCTGTTTTCCAAATCCAGAATTCTATACCTGACTGCATGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR TCA 90 bp | ATATGCTGCACACATGACCCAAGGGTAATTTTGTTTGTAGCATATCCATGTTTTACAGGCGGGCAAGAATaGGAAATCACAGCAAATGTT | + |
|
Preference number: 2 (lower is better) Translates to: ICCTHDPRVILFVAYPCFTGGQE*EITANV Trigger: AACATTTGCTGTGATTTCTCATTCTTGCCCGCCTGT...AAAACATGGATATGCTACAAACAAAATTACCCTTGGGTCATGTGTGCAGCATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR CCA 90 bp | ATATGCTGCACACATGACCCAAGGGTAATTTTGTTTGTAGCATATCCATGTTTTAAAGAGTTGAAGCACTaGGTGGGCATAATAAAGATG | + |
|
Preference number: 2 (lower is better) Translates to: ICCTHDPRVILFVAYPCFKELKH*VGIIKM Trigger: CATCTTTATTATGCCCACCCAGTGCTTCAACTCTTT...AAAACATGGATATGCTACAAACAAAATTACCCTTGGGTCATGTGTGCAGCATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR CCA 90 bp | TTCCATGCAGTCAGGTATAGAATTCTGGATTTGGAAAACAGGATGTGTAACTTCATTTGCCAAAACCTTTaGCAAATCTTTGAGCTTAGA | + |
|
Preference number: 2 (lower is better) Translates to: FHAVRYRILDLENRMCNFICQNL*QIFELR Trigger: TCTAAGCTCAAAGATTTGCCAAAGGTTTTGGCAAAT...GAAGTTACACATCCTGTTTTCCAAATCCAGAATTCTATACCTGACTGCATGGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR CCA 90 bp | ATATGCTGCACACATGACCCAAGGGTAATTTTGTTTGTAGCATATCCATGTTTTTCTCCACAATGTTATTaGTTTTATGGTACTAGGGAT | + |
|
Preference number: 2 (lower is better) Translates to: ICCTHDPRVILFVAYPCFSPQCY*FYGTRD Trigger: ATCCCTAGTACCATAAAACCAATAACATTGTGGAGA...AAAACATGGATATGCTACAAACAAAATTACCCTTGGGTCATGTGTGCAGCATAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR TCA 72 bp | TTACAGCAGTGCCTGCAGGGGCTCAGAGACTCCTACTaGGGCGGAGAAGCAGCTAAGGAGAGCTGGCCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: LQQCLQGLRDSY*GGEAAKESWPW Trigger: CCAAGGCCAGCTCTCCTTAGCTGCTTCTCCGCCTCAGTAGGAGTCTCTGAGCCCCTGCAGGCACTGCTGTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR CCA 72 bp | ACACCTGCACTCACCCAGCTGCAGTCAGGGAAAGCCTaGGACTTGGTGAGCAGGCATCCATCCACTCGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: TPALTQLQSGKA*DLVSRHPSTRV Trigger: AACCCGAGTGGATGGATGCCTGCTCACCAAGTCCCAGGCTTTCCCTGACTGCAGCTGGGTGAGTGCAGGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR TCA 72 bp | CGGGTTTACCTGCAGCTGCAGCAGCACTGGTGGCACTaGATACCGAGGACAAGCAAAGGTCACCTGTCCACC | + |
|
Preference number: 3 (lower is better) Translates to: RVYLQLQQHWWH*IPRTSKGHLST Trigger: GGTGGACAGGTGACCTTTGCTTGTCCTCGGTATTCAGTGCCACCAGTGCTGCTGCAGCTGCAGGTAAACCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR TCA 72 bp | AAAACGACAGAACAGAGGGGCATCATCCAGTCCTGCTaGCAGGAGGAGAGGAGGGAAGTGGCCGTAAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: KTTEQRGIIQSC*QEERREVAVRA Trigger: TGCTCTTACGGCCACTTCCCTCCTCTCCTCCTGTCAGCAGGACTGGATGATGCCCCTCTGTTCTGTCGTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR GCA 72 bp | CATCTGCCTCTGCTTCCAGCTGTCCCATGCTCTGGCTaGCAAGACTTCTCAGCCACGACAAACTGGACCTTT | + |
|
Preference number: 3 (lower is better) Translates to: HLPLLPAVPCSG*QDFSATTNWTF Trigger: AAAGGTCCAGTTTGTCGTGGCTGAGAAGTCTTGGCAGCCAGAGCATGGGACAGCTGGAAGCAGAGGCAGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR GCA 72 bp | CTCAGTCACCCTTCGTTTACTCCCCGGCCACAGCATTaGCCTGAGTACTGGGATTACAGGTTTGCACCACCA | + |
|
Preference number: 3 (lower is better) Translates to: LSHPSFTPRPQH*PEYWDYRFAPP Trigger: TGGTGGTGCAAACCTGTAATCCCAGTACTCAGGGCAATGCTGTGGCCGGGGAGTAAACGAAGGGTGACTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR CCA 72 bp | AAGCAGCTAAGGAGAGCTGGCCTTGGGAAAGGAGTCTaGGTACTTCCTAGAGTCTCACTGCTCTTTGGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: KQLRRAGLGKGV*VLPRVSLLFGP Trigger: GGGCCCAAAGAGCAGTGAGACTCTAGGAAGTACCCAGACTCCTTTCCCAAGGCCAGCTCTCCTTAGCTGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR TCA 72 bp | AGAGCTATCACTTGGGAACAGGGGCCACAGATAGCCTaGTGGGCTGAAAGTCAGAGGCCCAATGAGTCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: RAITWEQGPQIA*WAESQRPNESC Trigger: ACAGGACTCATTGGGCCTCTGACTTTCAGCCCATCAGGCTATCTGTGGCCCCTGTTCCCAAGTGATAGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR CAA 90 bp | CCTAAGGCAGTGACCATATTCAATTCCCCTTGCCCCCAACAACCTCAACTTTCCGTCTTACTATGTAGGTaGGGCTGGCCTCGGGAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: PKAVTIFNSPCPQQPQLSVLLCR*GWPREP Trigger: AGGCTCCCGAGGCCAGCCCAACCTACATAGTAAGAC...GGAAAGTTGAGGTTGTTGGGGGCAAGGGGAATTGAATATGGTCACTGCCTTAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR CAA 90 bp | GTGGGTTTCCATGACTCCCTTTCCCGTGACCTGCCACACATATTTGACCAGTCTGGAAAGACCAGCTCCTaGATCATGGACTCTCCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: VGFHDSLSRDLPHIFDQSGKTSS*IMDSPL Trigger: CAGGGGAGAGTCCATGATCAAGGAGCTGGTCTTTCC...AGACTGGTCAAATATGTGTGGCAGGTCACGGGAAAGGGAGTCATGGAAACCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR TCA 72 bp | TGCCCAGGGCCTCATACTTGCCAGGGAGGGATCTACTaGGACATACCCCAACCCAAATGTCTAGAATGGATG | + |
|
Preference number: 3 (lower is better) Translates to: CPGPHTCQGGIY*DIPQPKCLEWM Trigger: CATCCATTCTAGACATTTGGGTTGGGGTATGTCTCAGTAGATCCCTCCCTGGCAAGTATGAGGCCCTGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR TCA 72 bp | AACACAGACCTCTTCACTCCAGTCCTTAGAACAGCCTaGAGGCCCAGGTTAGAGACCCTTTACAGCAGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: NTDLFTPVLRTA*RPRLETLYSSA Trigger: GGCACTGCTGTAAAGGGTCTCTAACCTGGGCCTTCAGGCTGTTCTAAGGACTGGAGTGAAGAGGTCTGTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR TCA 72 bp | CAAAGGCCGAGCAGGGTTCCAGGTAACAGGAGCGTTTaGGGAAGAGACCTCTGTACTCTCTCTCATGGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: QRPSRVPGNRSV*GRDLCTLSHGK Trigger: CTTTCCATGAGAGAGAGTACAGAGGTCTCTTCCTCAAACGCTCCTGTTACCTGGAACCCTGCTCGGCCTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR CCA 72 bp | GCAGTCTTGCTGGAGGAAGTAAGTCACTGGGGTTGGTaGTCCTTGAAGGCTTGTACCATTTCCTGCTCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: AVLLEEVSHWGW*SLKACTISCSC Trigger: GCAAGAGCAGGAAATGGTACAAGCCTTCAAGGACCACCAACCCCAGTGACTTACTTCCTCCAGCAAGACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR CCA 72 bp | GAACTGGTGACGTGCTTATGGGTTCTAGCCTTTTCCTaGTTAATAGCTCTCAAGGGGCTCCAGGCAGACTGG | + |
|
Preference number: 3 (lower is better) Translates to: ELVTCLWVLAFS*LIALKGLQADW Trigger: CCAGTCTGCCTGGAGCCCCTTGAGAGCTATTAACCAGGAAAAGGCTAGAACCCATAAGCACGTCACCAGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR CCA 72 bp | AACACCACACTCTGCCCCACAAGTACTGTAGAAATCTaGGTCCAGGGAAGGCAGGAAGCTGCCCAGAAATCA | + |
|
Preference number: 3 (lower is better) Translates to: NTTLCPTSTVEI*VQGRQEAAQKS Trigger: TGATTTCTGGGCAGCTTCCTGCCTTCCCTGGACCCAGATTTCTACAGTACTTGTGGGGCAGAGTGTGGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR TCA 72 bp | GGCCCAATGAGTCCTGTTTCTCCCAGTGGCTCGCCTTaGGCATATTATTCTAAGAGACTCGGTTGCCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: GPMSPVSPSGSP*AYYSKRLGCLS Trigger: AGAGAGGCAACCGAGTCTCTTAGAATAATATGCTCAAGGCGAGCCACTGGGAGAAACAGGACTCATTGGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR GCA 72 bp | AGGACCCTCCAACTGCAGGGCTCAGAGTTTAAGAGATaGACATCCCCACTATCTGCCCAGGAAACAGAACAA | + |
|
Preference number: 3 (lower is better) Translates to: RTLQLQGSEFKR*TSPLSAQETEQ Trigger: TTGTTCTGTTTCCTGGGCAGATAGTGGGGATGTGCATCTCTTAAACTCTGAGCCCTGCAGTTGGAGGGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR GCA 72 bp | AGGTTGTCTGAAAAAGAGAATTCAGTAAGTACCTCCTaGTGTAGCGCTGGGATGGTGCCCAGGGCCTCATAC | + |
|
Preference number: 3 (lower is better) Translates to: RLSEKENSVSTS*CSAGMVPRASY Trigger: GTATGAGGCCCTGGGCACCATCCCAGCGCTACAGCAGGAGGTACTTACTGAATTCTCTTTTTCAGACAACCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR GCA 72 bp | TCCTCCATTGCTGGTGGTAATACAAACACGTGTAGCTaGGTGGGAAACACTGGGCAGTTTCTCAAACCGGTG | + |
|
Preference number: 3 (lower is better) Translates to: SSIAGGNTNTCS*VGNTGQFLKPV Trigger: CACCGGTTTGAGAAACTGCCCAGTGTTTCCCACGCAGCTACACGTGTTTGTATTACCACCAGCAATGGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR GCA 72 bp | CAATTCCCAGCACCCACATGGCAGCTCACACCTGCTTaGAACTCCAGTTCCAGAAGATCTAACACCCTTACA | + |
|
Preference number: 3 (lower is better) Translates to: QFPAPTWQLTPA*NSSSRRSNTLT Trigger: TGTAAGGGTGTTAGATCTTCTGGAACTGGAGTTGCAAGCAGGTGTGAGCTGCCATGTGGGTGCTGGGAATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR GCA 72 bp | ACAACGTGGGTTTCCATGACTCCCTTTCCCGTGACCTaGCACACATATTTGACCAGTCTGGACTACCACCTA | + |
|
Preference number: 3 (lower is better) Translates to: TTWVSMTPFPVT*HTYLTSLDYHL Trigger: TAGGTGGTAGTCCAGACTGGTCAAATATGTGTGGCAGGTCACGGGAAAGGGAGTCATGGAAACCCACGTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR CCA 72 bp | TGTACTCTCTCTCATGGAAAGGCTGGGCATAGTCCCTaGGAGCCAAGTGAGGATCAGAACTTTCCAGAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: CTLSHGKAGHSP*EPSEDQNFPEV Trigger: CACTTCTGGAAAGTTCTGATCCTCACTTGGCTCCCAGGGACTATGCCCAGCCTTTCCATGAGAGAGAGTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR CAA 90 bp | TCAATTCCCAGCACCCACATGGCAGCTCACACCTGCTTGCAACTCCAGTTCCAGAAATCACAGCAAATGTaGATGAGGAGGTGGAGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: SIPSTHMAAHTCLQLQFQKSQQM*MRRWRN Trigger: GTTTCTCCACCTCCTCATCAACATTTGCTGTGATTT...CTGGAACTGGAGTTGCAAGCAGGTGTGAGCTGCCATGTGGGTGCTGGGAATTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR GCA 72 bp | TTGGGAAAGGAGTCTGGGTACTTCCTAGAGTCTCACTaGTCTTTGGGCCCAGTAGTCCTATCTTCAAAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: LGKESGYFLESH*SLGPVVLSSKD Trigger: GTCCTTTGAAGATAGGACTACTGGGCCCAAAGAGCAGTGAGACTCTAGGAAGTACCCAGACTCCTTTCCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR CCA 72 bp | TTAGAGGATGCAGTCTTGCTGGAGGAAGTAAGTCACTaGGGTTGGTGGTCCTTGAAGGCTTGTACCATTTCC | + |
|
Preference number: 3 (lower is better) Translates to: LEDAVLLEEVSH*GWWSLKACTIS Trigger: GGAAATGGTACAAGCCTTCAAGGACCACCAACCCCAGTGACTTACTTCCTCCAGCAAGACTGCATCCTCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR CCA 72 bp | CAGACCAAGAAGGTAAAAGGAACAAGAGATCAGCAATaGTCCCGCCGTGCTCACAAAGATCCAGGAATCGGA | + |
|
Preference number: 3 (lower is better) Translates to: QTKKVKGTRDQQ*SRRAHKDPGIG Trigger: TCCGATTCCTGGATCTTTGTGAGCACGGCGGGACCATTGCTGATCTCTTGTTCCTTTTACCTTCTTGGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR CAA 90 bp | CCTAAGGCAGTGACCATATTCAATTCCCCTTGCCCCCAACAACCTCAACTTTCCAGGATTAGGAAAGAGTaGAAGCACTGGGTGGGCATA | + |
|
Preference number: 3 (lower is better) Translates to: PKAVTIFNSPCPQQPQLSRIRKE*KHWVGI Trigger: TATGCCCACCCAGTGCTTCAACTCTTTCCTAATCCT...GGAAAGTTGAGGTTGTTGGGGGCAAGGGGAATTGAATATGGTCACTGCCTTAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR TCA 72 bp | AAATACAGCACAAAAGTCCTTTCTTCTATCAAACCCTaGCCAGAGGACCAGGACAAAGGCCGAGCAGGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: KYSTKVLSSIKP*PEDQDKGRAGF Trigger: GAACCCTGCTCGGCCTTTGTCCTGGTCCTCTGGTCAGGGTTTGATAGAAGAAAGGACTTTTGTGCTGTATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR GCA 72 bp | GACCCCAAGACAAGACTTGGAACATTCCATGCCATCTaGTCTTTTTACAGTGTGCCATCTTTGGCTCTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: DPKTRLGTFHAI*SFYSVPSLALQ Trigger: CTGGAGAGCCAAAGATGGCACACTGTAAAAAGAGCAGATGGCATGGAATGTTCCAAGTCTTGTCTTGGGGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR GCA 72 bp | AGAGATGGTAAGATAAACATTGTATCCATCTGCCTCTaGTTCCAGCTGTCCCATGCTCTGGCTGCCAAGACT | + |
|
Preference number: 3 (lower is better) Translates to: RDGKINIVSICL*FQLSHALAAKT Trigger: AGTCTTGGCAGCCAGAGCATGGGACAGCTGGAAGCAGAGGCAGATGGATACAATGTTTATCTTACCATCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR GCA 72 bp | AGTGTACCTAAGGCAGTGACCATATTCAATTCCCCTTaGCCCCAACAACCTCAACTTTCCACTGACAACAGC | + |
|
Preference number: 3 (lower is better) Translates to: SVPKAVTIFNSP*PQQPQLSTDNS Trigger: GCTGTTGTCAGTGGAAAGTTGAGGTTGTTGGGGGCAAGGGGAATTGAATATGGTCACTGCCTTAGGTACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR GCA 72 bp | GGAAGAGATAGGTCAGTGCTTGAAATGGTCCCCCTTTaGTTGTCTCTAATACTAGCCCCACAAAGCTCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: GRDRSVLEMVPL*LSLILAPQSSL Trigger: GAGAGAGCTTTGTGGGGCTAGTATTAGAGACAAGCAAAGGGGGACCATTTCAAGCACTGACCTATCTCTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR CCA 72 bp | AACCTAAAAGCCAAGAGGAAAGGAGAAGGGAACCGCTaGCTTTCTTCTGTACACCAGACTTTGTGTCCATGG | + |
|
Preference number: 3 (lower is better) Translates to: NLKAKRKGEGNR*LSSVHQTLCPW Trigger: CCATGGACACAAAGTCTGGTGTACAGAAGAAAGCCAGCGGTTCCCTTCTCCTTTCCTCTTGGCTTTTAGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR CAA 90 bp | ATACATCAAAGGACCCTCCAACTGCAGGGCTCAGAGTTTAAGAGATGCACATCCACTTTGTGTCCATGGTaGTCTGTAGCTTTCCTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: IHQRTLQLQGSEFKRCTSTLCPW*SVAFLV Trigger: GACCAGGAAAGCTACAGACAACCATGGACACAAAGT...GGATGTGCATCTCTTAAACTCTGAGCCCTGCAGTTGGAGGGTCCTTTGATGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR CAA 90 bp | TGCGTGGGAAACACTGGGCAGTTTCTCAAACCGGTGAAAAGTTACCTTATGAGCTTAGAGGATGCAGTCTaGCTGGAGGAAGTAAGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: CVGNTGQFLKPVKSYLMSLEDAV*LEEVSH Trigger: GTGACTTACTTCCTCCAGCAAGACTGCATCCTCTAA...GCTCATAAGGTAACTTTTCACCGGTTTGAGAAACTGCCCAGTGTTTCCCACGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR CAA 90 bp | TCTCTCATGGAAAGGCTGGGCATAGTCCCTGGGAGCCAAGTGAGGATCAGAACTACCTTTGGCAAATCTTaGAGCTTAGAAGTAACTCAC | + |
|
Preference number: 3 (lower is better) Translates to: SLMERLGIVPGSQVRIRTTFGKS*SLEVTH Trigger: GTGAGTTACTTCTAAGCTCAAAGATTTGCCAAAGGT...AGTTCTGATCCTCACTTGGCTCCCAGGGACTATGCCCAGCCTTTCCATGAGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR CAA 90 bp | GTGGGTTTCCATGACTCCCTTTCCCGTGACCTGCCACACATATTTGACCAGTCTTCCCCAAGTTGCTTCTaGGTCATGATGTTTTGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: VGFHDSLSRDLPHIFDQSSPSCF*VMMFCK Trigger: TTTACAAAACATCATGACCAAGAAGCAACTTGGGGA...AGACTGGTCAAATATGTGTGGCAGGTCACGGGAAAGGGAGTCATGGAAACCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR TCA 72 bp | CATGTACACCCCAAGGAGCATCAACCATTAAGAGGGTaGAGACAGCCTACAGAATGGAGCAGAATGGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: HVHPKEHQPLRG*RQPTEWSRMEK Trigger: TTTCTCCATTCTGCTCCATTCTGTAGGCTGTCTTCACCCTCTTAATGGTTGATGCTCCTTGGGGTGTACATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR TCA 72 bp | ACAGGGAAAGGAGCCTCCCCTGAGGAAATGCCTCCATaGGATCCAGAATTTTCTCAATTAGTGATCAAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: TGKGASPEEMPP*DPEFSQLVIKG Trigger: GCCTTTGATCACTAATTGAGAAAATTCTGGATCTCATGGAGGCATTTCCTCAGGGGAGGCTCCTTTCCCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR TCA 72 bp | ACAAGCTGTAGTTATCACAGGGAAAGGAGCCTCCCCTaGGGAAATGCCTCCATGAGATCCAGAATTTTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: TSCSYHRERSLP*GNASMRSRIFS Trigger: TGAGAAAATTCTGGATCTCATGGAGGCATTTCCTCAGGGGAGGCTCCTTTCCCTGTGATAACTACAGCTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR GCA 72 bp | GGTCACATAGGTACACTGTGCCATCTACCATGTCAATaGAGAGACTCTGGGCTTGAATGTAGCAGATCCTTA | + |
|
Preference number: 3 (lower is better) Translates to: GHIGTLCHLPCQ*RDSGLECSRSL Trigger: TAAGGATCTGCTACATTCAAGCCCAGAGTCTCTGCATTGACATGGTAGATGGCACAGTGTACCTATGTGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR GCA 72 bp | AAAAACAGAGATGGTAAGATAAACATTGTATCCATCTaGCTCTGCTTCCAGCTGTCCCATGCTCTGGCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: KNRDGKINIVSI*LCFQLSHALAA Trigger: GGCAGCCAGAGCATGGGACAGCTGGAAGCAGAGGCAGATGGATACAATGTTTATCTTACCATCTCTGTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR GCA 72 bp | CGAAACCAGTGGACAGCACTGAGTTTAGTTCCTGTCTaGAAATATAAAGGGAGGGCACTCTTTGGAAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: RNQWTALSLVPV*KYKGRALFGRK Trigger: CTTCCTTCCAAAGAGTGCCCTCCCTTTATATTTGCAGACAGGAACTAAACTCAGTGCTGTCCACTGGTTTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR CCA 72 bp | TTTCAGGTACAAAAACAACATGGCATTATGACAACGTaGGTTTCCATGACTCCCTTTCCCGTGACCTGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: FQVQKQHGIMTT*VSMTPFPVTCH Trigger: GTGGCAGGTCACGGGAAAGGGAGTCATGGAAACCCACGTTGTCATAATGCCATGTTGTTTTTGTACCTGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR CAA 90 bp | TGCGTGGGAAACACTGGGCAGTTTCTCAAACCGGTGAAAAGTTACCTTATGAGCGGCAAAATGTGTGGCTaGAATGAGAAATGTATCCCA | + |
|
Preference number: 3 (lower is better) Translates to: CVGNTGQFLKPVKSYLMSGKMCG*NEKCIP Trigger: TGGGATACATTTCTCATTCAAGCCACACATTTTGCC...GCTCATAAGGTAACTTTTCACCGGTTTGAGAAACTGCCCAGTGTTTCCCACGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR GCA 72 bp | TTGGAACATTCCATGCCATCTGCTCTTTTTACAGTGTaGCATCTTTGGCTCTCCAGTTTAGACCGACTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: LEHSMPSALFTV*HLWLSSLDRLW Trigger: CCAAAGTCGGTCTAAACTGGAGAGCCAAAGATGGCACACTGTAAAAAGAGCAGATGGCATGGAATGTTCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR CCA 72 bp | GACTCGGTTGCCTCTCTATCCAAGCATGGAAACGTTTaGGAAACGTTTGGTCATTACCTTCCTCTAGAACTA | + |
|
Preference number: 3 (lower is better) Translates to: DSVASLSKHGNV*ETFGHYLPLEL Trigger: TAGTTCTAGAGGAAGGTAATGACCAAACGTTTCCCAAACGTTTCCATGCTTGGATAGAGAGGCAACCGAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR-3UTR CAA 90 bp | TTCCATGCAGTCAGGTATAGAATTCTGGATTTGGAAAACAGGATGTGTAACTTCTGGGGTTGGTGGTCCTaGAAGGCTTGTACCATTTCC | + |
|
Preference number: 3 (lower is better) Translates to: FHAVRYRILDLENRMCNFWGWWS*KACTIS Trigger: GGAAATGGTACAAGCCTTCAAGGACCACCAACCCCA...GAAGTTACACATCCTGTTTTCCAAATCCAGAATTCTATACCTGACTGCATGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR TCA 72 bp | AGAAAAGAATCACCCCACCTAGAGGAAGAAGGTAGGTaGGAACACCTCAAGAAAGAGTCACATCAAAGCATG | + |
|
Preference number: 3 (lower is better) Translates to: RKESPHLEEEGR*EHLKKESHQSM Trigger: CATGCTTTGATGTGACTCTTTCTTGAGGTGTTCTCACCTACCTTCTTCCTCTAGGTGGGGTGATTCTTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR CCA 72 bp | GGCAAAATGTGTGGCTTGAATGAGAAATGTATCCCATaGGCTTATGTATTTGAACACGTGGTCCCAGTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: GKMCGLNEKCIP*AYVFEHVVPVG Trigger: ACCAACTGGGACCACGTGTTCAAATACATAAGCCCATGGGATACATTTCTCATTCAAGCCACACATTTTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR TCA 72 bp | AATGGTAAAGTTTTCCCGAAGCTCAGATTCACCTACTaGCTAGTTTCCAGGTTCTCAGGTCTCCAGATCAAT | + |
|
Preference number: 3 (lower is better) Translates to: NGKVFPKLRFTY*LVSRFSGLQIN Trigger: ATTGATCTGGAGACCTGAGAACCTGGAAACTAGTCAGTAGGTGAATCTGAGCTTCGGGAAAACTTTACCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR CCA 72 bp | GTTTGCACCACCATACCCAGCTCTCCACAATGTTATTaGTTTTATGGTACTAGGGATAGAACTCAGAACCTT | + |
|
Preference number: 3 (lower is better) Translates to: VCTTIPSSPQCY*FYGTRDRTQNL Trigger: AAGGTTCTGAGTTCTATCCCTAGTACCATAAAACCAATAACATTGTGGAGAGCTGGGTATGGTGGTGCAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR CCA 72 bp | GGTGAGAACACCTCAAGAAAGAGTCACATCAAAGCATaGAAGAACATGGTAAGTAAGCAAGACTTTACCCAG | + |
|
Preference number: 3 (lower is better) Translates to: GENTSRKSHIKA*KNMVSKQDFTQ Trigger: CTGGGTAAAGTCTTGCTTACTTACCATGTTCTTCCATGCTTTGATGTGACTCTTTCTTGAGGTGTTCTCACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR TCA 72 bp | CAAGATCCACTTGTGTTTCTGCATATGCTGCACACATaGCCCAAGGGTAATTTTGTTTGTAGCATATCCATG | + |
|
Preference number: 3 (lower is better) Translates to: QDPLVFLHMLHT*PKGNFVCSISM Trigger: CATGGATATGCTACAAACAAAATTACCCTTGGGTCATGTGTGCAGCATATGCAGAAACACAAGTGGATCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR TCA 72 bp | GAAGAGACATTGAACATCATTAGCCAGAGACATGCATaGCACCAGCAGGATATTGTAATAAAAGACAGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: EETLNIISQRHA*HQQDIVIKDRS Trigger: TGACCTGTCTTTTATTACAATATCCTGCTGGTGTCATGCATGTCTCTGGCTAATGATGTTCAATGTCTCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| CDS-3UTR TCA 90 bp | CACCCAGCTGCAGTCAGGGAAAGCCTGGGACTTGGTGAGCAGGCATCCATCCACGCGGCTCTTCCTGCTTaGAGATGGGCAGAGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HPAAVRESLGLGEQASIHAALPA*RWAEPA Trigger: TGCTGGCTCTGCCCATCTTCAAGCAGGAAGAGCCGC...GTGGATGGATGCCTGCTCACCAAGTCCCAGGCTTTCCCTGACTGCAGCTGGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| CDS-3UTR GCA 90 bp | CACCCAGCTGCAGTCAGGGAAAGCCTGGGACTTGGTGAGCAGGCATCCATCCACGAGAAGCGGTTGCGATaGAGCCACTGCTGTGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: HPAAVRESLGLGEQASIHEKRLR*SHCCAS Trigger: GGATGCACAGCAGTGGCTGCATCGCAACCGCTTCTC...GTGGATGGATGCCTGCTCACCAAGTCCCAGGCTTTCCCTGACTGCAGCTGGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR CAA 72 bp | TGCTGTAGCGCTGGGATGGTGCCCAGGGCCTCATACTaGCCAGGGAGGGATCTACTGAGACATACCCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: CCSAGMVPRASY*PGRDLLRHTPT Trigger: GGTTGGGGTATGTCTCAGTAGATCCCTCCCTGGCAAGTATGAGGCCCTGGGCACCATCCCAGCGCTACAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR CAA 72 bp | GCACTCACCCAGCTGCAGTCAGGGAAAGCCTGGGACTaGGTGAGCAGGCATCCATCCACTCGGGTTTACCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALTQLQSGKAWD*VSRHPSTRVYL Trigger: CAGGTAAACCCGAGTGGATGGATGCCTGCTCACCAAGTCCCAGGCTTTCCCTGACTGCAGCTGGGTGAGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| CDS-3UTR CCA 90 bp | CTGCTTCCAGCTGTCCCATGCTCTGGCTGCCAAGACTTCTCAGCCACGACAAACGCGGTGTATATGCTGTaGGGGGATGCTGTACAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLPAVPCSGCQDFSATTNAVYML*GDAVQA Trigger: AGCCTGTACAGCATCCCCCCACAGCATATACACCGC...GTTTGTCGTGGCTGAGAAGTCTTGGCAGCCAGAGCATGGGACAGCTGGAAGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| CDS-3UTR GCA 90 bp | CACCCAGCTGCAGTCAGGGAAAGCCTGGGACTTGGTGAGCAGGCATCCATCCACGTGCACCTGAATGAATaGAGATGCTCTCTTCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: HPAAVRESLGLGEQASIHVHLNE*RCSLRW Trigger: CCATCGAAGAGAGCATCTGCATTCATTCAGGTGCAC...GTGGATGGATGCCTGCTCACCAAGTCCCAGGCTTTCCCTGACTGCAGCTGGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| CDS-3UTR CCA 90 bp | CACCCAGCTGCAGTCAGGGAAAGCCTGGGACTTGGTGAGCAGGCATCCATCCACAGATGCTCTCTTCGATaGGTCCCACAAAAACTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HPAAVRESLGLGEQASIHRCSLR*VPQKLH Trigger: GTGGAGTTTTTGTGGGACCCATCGAAGAGAGCATCT...GTGGATGGATGCCTGCTCACCAAGTCCCAGGCTTTCCCTGACTGCAGCTGGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| CDS-3UTR GCA 90 bp | GTGGGTTTCCATGACTCCCTTTCCCGTGACCTGCCACACATATTTGACCAGTCTCCCTTCTCACCCCCATaGTTCCTGGGGGTGAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: VGFHDSLSRDLPHIFDQSPFSPP*FLGVNS Trigger: GGAATTCACCCCCAGGAAGCATGGGGGTGAGAAGGG...AGACTGGTCAAATATGTGTGGCAGGTCACGGGAAAGGGAGTCATGGAAACCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| CDS-3UTR GCA 90 bp | CACCCAGCTGCAGTCAGGGAAAGCCTGGGACTTGGTGAGCAGGCATCCATCCACTCCCCACTCTCATTCTaGTTAAACGTGTCAATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HPAAVRESLGLGEQASIHSPLSF*LNVSIC Trigger: GCAGATTGACACGTTTAAGCAGAATGAGAGTGGGGA...GTGGATGGATGCCTGCTCACCAAGTCCCAGGCTTTCCCTGACTGCAGCTGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| CDS-3UTR GCA 90 bp | TCAATTCCCAGCACCCACATGGCAGCTCACACCTGCTTGCAACTCCAGTTCCAGTTGCGATGCAGCCACTaGTGTGCATCCTGGATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SIPSTHMAAHTCLQLQFQLRCSH*CASWIE Trigger: CTCTATCCAGGATGCACAGCAGTGGCTGCATCGCAA...CTGGAACTGGAGTTGCAAGCAGGTGTGAGCTGCCATGTGGGTGCTGGGAATTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| CDS-3UTR CCA 90 bp | CTGCTTCCAGCTGTCCCATGCTCTGGCTGCCAAGACTTCTCAGCCACGACAAACCAGCACCTGAGAAGCTaGCAAAGAGCCAGCAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: LLPAVPCSGCQDFSATTNQHLRS*QRASRI Trigger: AATTCTGCTGGCTCTTTGCCAGCTTCTCAGGTGCTG...GTTTGTCGTGGCTGAGAAGTCTTGGCAGCCAGAGCATGGGACAGCTGGAAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| CDS-3UTR GCA 90 bp | CTGCTTCCAGCTGTCCCATGCTCTGGCTGCCAAGACTTCTCAGCCACGACAAACCTGAATGAATGCAGATaGTCTCTTCGATGGGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLPAVPCSGCQDFSATTNLNECR*SLRWVP Trigger: TGGGACCCATCGAAGAGAGCATCTGCATTCATTCAG...GTTTGTCGTGGCTGAGAAGTCTTGGCAGCCAGAGCATGGGACAGCTGGAAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| CDS-3UTR CCA 90 bp | TCTCTCATGGAAAGGCTGGGCATAGTCCCTGGGAGCCAAGTGAGGATCAGAACTGGAGGCCAAAGCTGTTaGGAGAGCCATTGTAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLMERLGIVPGSQVRIRTGGQSC*ESHCSL Trigger: CAAGCTACAATGGCTCTCCCAACAGCTTTGGCCTCC...AGTTCTGATCCTCACTTGGCTCCCAGGGACTATGCCCAGCCTTTCCATGAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR CAA 72 bp | GAGGGACCAGGAGAGATGGTTCAGGGGTTAGGAGCATaGGCTTCTCTTCCAAAGGACCAAGCTTCAATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: EGPGEMVQGLGA*ASLPKDQASIP Trigger: GGGAATTGAAGCTTGGTCCTTTGGAAGAGAAGCCAATGCTCCTAACCCCTGAACCATCTCTCCTGGTCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR CAA 72 bp | TTAACAAAGCCTCAGGGCAGCCACGTGGGAAGAAGCTaGTCCACGTACTTCACAGATGTGGCCTTCGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LTKPQGSHVGRS*STYFTDVAFVG Trigger: TCCTACGAAGGCCACATCTGTGAAGTACGTGGACAAGCTTCTTCCCACGTGGCTGCCCTGAGGCTTTGTTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| CDS-3UTR TCA 90 bp | AAAGATCCAGGAATCGGAGGTCTCCAGACTACAGAAGCTCCAGTCCTTTCAGTACAGGAGGTCAGCACCTaGGAAGCTGGCAAAGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KDPGIGGLQTTEAPVLSVQEVST*EAGKEP Trigger: TGGCTCTTTGCCAGCTTCTCAGGTGCTGACCTCCTG...TACTGAAAGGACTGGAGCTTCTGTAGTCTGGAGACCTCCGATTCCTGGATCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| CDS-3UTR TCA 90 bp | TCTCTCATGGAAAGGCTGGGCATAGTCCCTGGGAGCCAAGTGAGGATCAGAACTGTCCACACTTCAGGATaGTGTGGTAGCCATCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLMERLGIVPGSQVRIRTVHTSG*CGSHHC Trigger: GCAATGATGGCTACCACATCATCCTGAAGTGTGGAC...AGTTCTGATCCTCACTTGGCTCCCAGGGACTATGCCCAGCCTTTCCATGAGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| CDS-3UTR GCA 90 bp | AAAGATCCAGGAATCGGAGGTCTCCAGACTACAGAAGCTCCAGTCCTTTCAGTAAGCTGCGGCTCTTCCTaGTTGAAGATGGGCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KDPGIGGLQTTEAPVLSVSCGSS*LKMGRA Trigger: GGCTCTGCCCATCTTCAAGCAGGAAGAGCCGCAGCT...TACTGAAAGGACTGGAGCTTCTGTAGTCTGGAGACCTCCGATTCCTGGATCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| CDS-3UTR CCA 90 bp | CCTAAGGCAGTGACCATATTCAATTCCCCTTGCCCCCAACAACCTCAACTTTCCTGCAGCCGGCGGTCATaGAAAACGACACGGATGATG | + |
|
Preference number: 4 (lower is better) Translates to: PKAVTIFNSPCPQQPQLSCSRRS*KTTRMM Trigger: CATCATCCGTGTCGTTTTCCATGACCGCCGGCTGCA...GGAAAGTTGAGGTTGTTGGGGGCAAGGGGAATTGAATATGGTCACTGCCTTAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| CDS-3UTR CCA 90 bp | GTGGGTTTCCATGACTCCCTTTCCCGTGACCTGCCACACATATTTGACCAGTCTATTGTAGCTTGGGGATaGGGTGTTGTTCGCCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: VGFHDSLSRDLPHIFDQSIVAWG*GVVRLV Trigger: TACCAGGCGAACAACACCCCATCCCCAAGCTACAAT...AGACTGGTCAAATATGTGTGGCAGGTCACGGGAAAGGGAGTCATGGAAACCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| CDS-3UTR CCA 90 bp | ATACATCAAAGGACCCTCCAACTGCAGGGCTCAGAGTTTAAGAGATGCACATCCCACTGCTGTGCATCCTaGATAGAGGCTGATGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: IHQRTLQLQGSEFKRCTSHCCAS*IEADGS Trigger: GCTCCCATCAGCCTCTATCCAGGATGCACAGCAGTG...GGATGTGCATCTCTTAAACTCTGAGCCCTGCAGTTGGAGGGTCCTTTGATGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| CDS-3UTR TCA 90 bp | GTGGGTTTCCATGACTCCCTTTCCCGTGACCTGCCACACATATTTGACCAGTCTCTGATACAGTGCACCTaGATGAATGCAGATGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VGFHDSLSRDLPHIFDQSLIQCT*MNADAL Trigger: GAGAGCATCTGCATTCATTCAGGTGCACTGTATCAG...AGACTGGTCAAATATGTGTGGCAGGTCACGGGAAAGGGAGTCATGGAAACCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| CDS-3UTR CCA 90 bp | ATACATCAAAGGACCCTCCAACTGCAGGGCTCAGAGTTTAAGAGATGCACATCCAGAGCCATTGTAGCTTaGGGATGGGGTGTTGTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: IHQRTLQLQGSEFKRCTSRAIVA*GWGVVR Trigger: GCGAACAACACCCCATCCCCAAGCTACAATGGCTCT...GGATGTGCATCTCTTAAACTCTGAGCCCTGCAGTTGGAGGGTCCTTTGATGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR CAA 72 bp | TGGCTTTCTTCTGTACACCAGACTTTGTGTCCATGGTaGTCTGTAGCTTTCCTGGTCTGGGTAGAGTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: WLSSVHQTLCPW*SVAFLVWVESL Trigger: GAGGGACTCTACCCAGACCAGGAAAGCTACAGACAACCATGGACACAAAGTCTGGTGTACAGAAGAAAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR CAA 72 bp | ATTAGGAGGAGAACTGTGTGTGGAGCCCTTGTGAGATaGGCAGAGCTAGCCATGAAGCCAGTGACTCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: IRRRTVCGALVR*AELAMKPVTQE Trigger: TTCTTGAGTCACTGGCTTCATGGCTAGCTCTGCCAATCTCACAAGGGCTCCACACACAGTTCTCCTCCTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR CAA 72 bp | TTGCTGGAGGAAGTAAGTCACTGGGGTTGGTGGTCCTaGAAGGCTTGTACCATTTCCTGCTCTTGCTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLEEVSHWGWWS*KACTISCSCSF Trigger: GAAAGAGCAAGAGCAGGAAATGGTACAAGCCTTCAAGGACCACCAACCCCAGTGACTTACTTCCTCCAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| CDS-3UTR TCA 90 bp | TCAATTCCCAGCACCCACATGGCAGCTCACACCTGCTTGCAACTCCAGTTCCAGTCATCTTGGAAATTCTaGACCATCTCATTGCTTACC | + |
|
Preference number: 4 (lower is better) Translates to: SIPSTHMAAHTCLQLQFQSSWKF*TISLLT Trigger: GGTAAGCAATGAGATGGTTCAGAATTTCCAAGATGA...CTGGAACTGGAGTTGCAAGCAGGTGTGAGCTGCCATGTGGGTGCTGGGAATTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| CDS-3UTR GCA 90 bp | ATACATCAAAGGACCCTCCAACTGCAGGGCTCAGAGTTTAAGAGATGCACATCCCATCACGCAAGTAGCTaGCAGAGTTGTGCTGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: IHQRTLQLQGSEFKRCTSHHASS*QSCAGC Trigger: ACAACCAGCACAACTCTGGCAGCTACTTGCGTGATG...GGATGTGCATCTCTTAAACTCTGAGCCCTGCAGTTGGAGGGTCCTTTGATGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| CDS-3UTR GCA 90 bp | CCTAAGGCAGTGACCATATTCAATTCCCCTTGCCCCCAACAACCTCAACTTTCCTTAAACGTGTCAATCTaGACCCGAAAAGGCACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PKAVTIFNSPCPQQPQLSLNVSI*TRKGTP Trigger: GGGAGTGCCTTTTCGGGTGCAGATTGACACGTTTAA...GGAAAGTTGAGGTTGTTGGGGGCAAGGGGAATTGAATATGGTCACTGCCTTAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| CDS-3UTR GCA 90 bp | TCAATTCCCAGCACCCACATGGCAGCTCACACCTGCTTGCAACTCCAGTTCCAGTGTGGTAGCCATCATTaGTTTCTGCTTTTAATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SIPSTHMAAHTCLQLQFQCGSHH*FLLLMC Trigger: GCACATTAAAAGCAGAAAGCAATGATGGCTACCACA...CTGGAACTGGAGTTGCAAGCAGGTGTGAGCTGCCATGTGGGTGCTGGGAATTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| CDS-3UTR CCA 90 bp | CCTAAGGCAGTGACCATATTCAATTCCCCTTGCCCCCAACAACCTCAACTTTCCTTGAACACCTTGATCTaGCAGCTGGCAGAGTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: PKAVTIFNSPCPQQPQLSLNTLI*QLAECR Trigger: TCTACACTCTGCCAGCTGCCAGATCAAGGTGTTCAA...GGAAAGTTGAGGTTGTTGGGGGCAAGGGGAATTGAATATGGTCACTGCCTTAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| CDS-3UTR CCA 90 bp | TCTCTCATGGAAAGGCTGGGCATAGTCCCTGGGAGCCAAGTGAGGATCAGAACTTCCAGGAAGATAGCATaGTATACACACAGGCTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: SLMERLGIVPGSQVRIRTSRKIA*YTHRLL Trigger: TAACAGCCTGTGTGTATACCATGCTATCTTCCTGGA...AGTTCTGATCCTCACTTGGCTCCCAGGGACTATGCCCAGCCTTTCCATGAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR CAA 72 bp | AAGGAGTCTGGGTACTTCCTAGAGTCTCACTGCTCTTaGGGCCCAGTAGTCCTATCTTCAAAGGACAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KESGYFLESHCS*GPVVLSSKDKE Trigger: CTCTTTGTCCTTTGAAGATAGGACTACTGGGCCCAAAGAGCAGTGAGACTCTAGGAAGTACCCAGACTCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| CDS-3UTR CCA 90 bp | AAAGATCCAGGAATCGGAGGTCTCCAGACTACAGAAGCTCCAGTCCTTTCAGTATTCGTGTTCAGATCTTaGAAGTCCCCTAGCTTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: KDPGIGGLQTTEAPVLSVFVFRS*KSPSFR Trigger: TCGGAAGCTAGGGGACTTCCAAGATCTGAACACGAA...TACTGAAAGGACTGGAGCTTCTGTAGTCTGGAGACCTCCGATTCCTGGATCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| CDS-3UTR CCA 90 bp | TGCGTGGGAAACACTGGGCAGTTTCTCAAACCGGTGAAAAGTTACCTTATGAGCGGACCAAATCATCTCTaGACATCTTCAGGAGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: CVGNTGQFLKPVKSYLMSGPNHL*TSSGGQ Trigger: CTGACCTCCTGAAGATGTCCAGAGATGATTTGGTCC...GCTCATAAGGTAACTTTTCACCGGTTTGAGAAACTGCCCAGTGTTTCCCACGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| CDS-3UTR CCA 90 bp | CCTAAGGCAGTGACCATATTCAATTCCCCTTGCCCCCAACAACCTCAACTTTCCCCTGACAGACATAGATaGTCATCTTTGGCCTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: PKAVTIFNSPCPQQPQLSPDRHR*SSLASH Trigger: ATGTGAGGCCAAAGATGACCATCTATGTCTGTCAGG...GGAAAGTTGAGGTTGTTGGGGGCAAGGGGAATTGAATATGGTCACTGCCTTAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| CDS-3UTR CCA 90 bp | ATATGCTGCACACATGACCCAAGGGTAATTTTGTTTGTAGCATATCCATGTTTTGGGTTGGGCTGGCCCTaGGGTCCAAGATACCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: ICCTHDPRVILFVAYPCFGLGWP*GPRYQQ Trigger: CTGTTGGTATCTTGGACCCCAGGGCCAGCCCAACCC...AAAACATGGATATGCTACAAACAAAATTACCCTTGGGTCATGTGTGCAGCATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| CDS-3UTR CCA 90 bp | CCTAAGGCAGTGACCATATTCAATTCCCCTTGCCCCCAACAACCTCAACTTTCCATAGATGGTCATCTTTaGCCTCACATTCCTGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PKAVTIFNSPCPQQPQLSIDGHL*PHIPAF Trigger: AAAGGCAGGAATGTGAGGCCAAAGATGACCATCTAT...GGAAAGTTGAGGTTGTTGGGGGCAAGGGGAATTGAATATGGTCACTGCCTTAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| 3UTR CAA 72 bp | ATGGGGTTTACATCCACACACACACACAAGATCCACTaGTGTTTCTGCATATGCTGCACACATGACCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: MGFTSTHTHKIH*CFCICCTHDPR Trigger: CCTTGGGTCATGTGTGCAGCATATGCAGAAACACAAGTGGATCTTGTGTGTGTGTGTGGATGTAAACCCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| CDS-3UTR TCA 90 bp | TTCCATGCAGTCAGGTATAGAATTCTGGATTTGGAAAACAGGATGTGTAACTTCGAGCCAGCAGAATTGTaGGAAGCGGTTGCGATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FHAVRYRILDLENRMCNFEPAEL*EAVAMQ Trigger: CTGCATCGCAACCGCTTCTCACAATTCTGCTGGCTC...GAAGTTACACATCCTGTTTTCCAAATCCAGAATTCTATACCTGACTGCATGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| CDS-3UTR TCA 90 bp | TTCCATGCAGTCAGGTATAGAATTCTGGATTTGGAAAACAGGATGTGTAACTTCATCCTGGATAGAGGCTaGTGGGAGCAGGTGATCACT | + |
|
Preference number: 4 (lower is better) Translates to: FHAVRYRILDLENRMCNFILDRG*WEQVIT Trigger: AGTGATCACCTGCTCCCATCAGCCTCTATCCAGGAT...GAAGTTACACATCCTGTTTTCCAAATCCAGAATTCTATACCTGACTGCATGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| CDS-3UTR CCA 90 bp | TGCGTGGGAAACACTGGGCAGTTTCTCAAACCGGTGAAAAGTTACCTTATGAGCGATACCAACAGACAGTaGAATATCAATGTCCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: CVGNTGQFLKPVKSYLMSDTNRQ*NINVQD Trigger: ATCCTGGACATTGATATTCCACTGTCTGTTGGTATC...GCTCATAAGGTAACTTTTCACCGGTTTGAGAAACTGCCCAGTGTTTCCCACGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| CDS-3UTR CCA 90 bp | CTAGACTCTCCCACTACATATCATATATGTAAAACTAACTCAGACTGGAGCAGAGGATGCTGTACAGGCTaGCGATCTTCTCAGTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LDSPTTYHICKTNSDWSRGCCTG*RSSQSA Trigger: AGCTGACTGAGAAGATCGCCAGCCTGTACAGCATCC...TCTGCTCCAGTCTGAGTTAGTTTTACATATATGATATGTAGTGGGAGAGTCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| CDS-3UTR GCA 90 bp | ATATGCTGCACACATGACCCAAGGGTAATTTTGTTTGTAGCATATCCATGTTTTTGGTACTCTGTGTACTaGAGCCGGCGGTCATGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: ICCTHDPRVILFVAYPCFWYSVY*SRRSWK Trigger: TTTCCATGACCGCCGGCTGCAGTACACAGAGTACCA...AAAACATGGATATGCTACAAACAAAATTACCCTTGGGTCATGTGTGCAGCATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
||
| CDS-3UTR GCA 90 bp | ATATGCTGCACACATGACCCAAGGGTAATTTTGTTTGTAGCATATCCATGTTTTTCCCCACTGTCATCCTaGTTCTGTGGCAAGGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: ICCTHDPRVILFVAYPCFSPLSS*FCGKGS Trigger: ACTACCCTTGCCACAGAAGCAGGATGACAGTGGGGA...AAAACATGGATATGCTACAAACAAAATTACCCTTGGGTCATGTGTGCAGCATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| CDS-3UTR TCA 90 bp | TTCCATGCAGTCAGGTATAGAATTCTGGATTTGGAAAACAGGATGTGTAACTTCTACAGTGCACCTGAATaGATGCAGATGCTCTCTTCG | + |
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Preference number: 4 (lower is better) Translates to: FHAVRYRILDLENRMCNFYSAPE*MQMLSS Trigger: CGAAGAGAGCATCTGCATTCATTCAGGTGCACTGTA...GAAGTTACACATCCTGTTTTCCAAATCCAGAATTCTATACCTGACTGCATGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR CAA 72 bp | GAAAATGTGGGAGGTCACATGGGCAAAATGTGTGGCTaGAATGAGAAATGTATCCCATGGGCTTATGTATTT | + |
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Preference number: 4 (lower is better) Translates to: ENVGGHMGKMCG*NEKCIPWAYVF Trigger: AAATACATAAGCCCATGGGATACATTTCTCATTCAAGCCACACATTTTGCCCATGTGACCTCCCACATTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR CAA 72 bp | TCTAGACCCCCACAATGGCTAATCTTGATTGTCAACTaGATGGGACTTAGTATCACCATGGAAATAAACCTC | + |
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Preference number: 4 (lower is better) Translates to: SRPPQWLILIVN*MGLSITMEINL Trigger: GAGGTTTATTTCCATGGTGATACTAAGTCCCATCAAGTTGACAATCAAGATTAGCCATTGTGGGGGTCTAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| 3UTR CAA 72 bp | TTCTGCATATGCTGCACACATGACCCAAGGGTAATTTaGTTTGTAGCATATCCATGTTTTGAATGTGACCCG | + |
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Preference number: 4 (lower is better) Translates to: FCICCTHDPRVI*FVAYPCFECDP Trigger: CGGGTCACATTCAAAACATGGATATGCTACAAACAAAATTACCCTTGGGTCATGTGTGCAGCATATGCAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| CDS TCA 90 bp | GCAAGCGGGCCCCATTCTCAGGAGATAGCTGCGGCTCTTCCTGCTTaGAGATGGGCAGAGCCAGCACATCACGCAAGTAGCTGCCAGAGT | + |
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Preference number: 5 (lower is better) Translates to: ASGPHSQEIAAALPA*RWAEPAHHASSCQS Trigger: ACTCTGGCAGCTACTTGCGTGATGTGCTGGCTCTGCCCATCTTCAAGCAGGAAGAGCCGCAGCTATCTCCTGAGAATGGGGCCCGCTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| CDS CCA 90 bp | GTTACCTTCACGGAGGCCAAAGCTGTTGGGAGAGCCATTGTAGCTTaGGGATGGGGTGTTGTTCGCCTGGTAGGGGACGTCAGGCCATGG | + |
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Preference number: 5 (lower is better) Translates to: VTFTEAKAVGRAIVA*GWGVVRLVGDVRPW Trigger: CCATGGCCTGACGTCCCCTACCAGGCGAACAACACCCCATCCCCAAGCTACAATGGCTCTCCCAACAGCTTTGGCCTCCGTGAAGGTAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| CDS GCA 90 bp | GGCCGACTCCACCGCCAACCCTCCAACTGTTGGTACTCTGTGTACTaGAGCCGGCGGTCATGGAAAACGACACGGATGATGCTCTTCACA | + |
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Preference number: 5 (lower is better) Translates to: GRLHRQPSNCWYSVY*SRRSWKTTRMMLFT Trigger: TGTGAAGAGCATCATCCGTGTCGTTTTCCATGACCGCCGGCTGCAGTACACAGAGTACCAACAGTTGGAGGGTTGGCGGTGGAGTCGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| CDS CCA 90 bp | TTCACGGAGGCCAAAGCTGTTGGGAGAGCCATTGTAGCTTGGGGATaGGGTGTTGTTCGCCTGGTAGGGGACGTCAGGCCATGGAGAACA | + |
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Preference number: 5 (lower is better) Translates to: FTEAKAVGRAIVAWG*GVVRLVGDVRPWRT Trigger: TGTTCTCCATGGCCTGACGTCCCCTACCAGGCGAACAACACCCCATCCCCAAGCTACAATGGCTCTCCCAACAGCTTTGGCCTCCGTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| CDS GCA 90 bp | GAGAAGCTGGCAAAGAGCCAGCAGAATTGTGAGAAGCGGTTGCGATaGAGCCACTGCTGTGCATCCTGGATAGAGGCTGATGGGAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: EKLAKSQQNCEKRLR*SHCCASWIEADGSR Trigger: CCTGCTCCCATCAGCCTCTATCCAGGATGCACAGCAGTGGCTGCATCGCAACCGCTTCTCACAATTCTGCTGGCTCTTTGCCAGCTTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| CDS-3UTR CAA 90 bp | CTGCTTCCAGCTGTCCCATGCTCTGGCTGCCAAGACTTCTCAGCCACGACAAACCTCACATTCCTGCCTTaGATGGCATTGAAGAGCCGA | + |
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Preference number: 5 (lower is better) Translates to: LLPAVPCSGCQDFSATTNLTFLP*MALKSR Trigger: TCGGCTCTTCAATGCCATCAAAGGCAGGAATGTGAG...GTTTGTCGTGGCTGAGAAGTCTTGGCAGCCAGAGCATGGGACAGCTGGAAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| CDS GCA 90 bp | CATCTTGGAAATTCTGAACCATCTCATTGCTTACCACCACGTGGATaGCAGCGGGACCCTGTCGATAGACGCGGTGTATATGCTGTGGGG | + |
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Preference number: 5 (lower is better) Translates to: HLGNSEPSHCLPPRG*QRDPVDRRGVYAVG Trigger: CCCCACAGCATATACACCGCGTCTATCGACAGGGTCCCGCTGGCATCCACGTGGTGGTAAGCAATGAGATGGTTCAGAATTTCCAAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| CDS CCA 90 bp | GGTCCCACAAAAACTCCACAGCATTCAGCTGGGTTGGGCTGGCCCTaGGGTCCAAGATACCAACAGACAGTGGAATATCAATGTCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: GPTKTPQHSAGLGWP*GPRYQQTVEYQCPG Trigger: TCCTGGACATTGATATTCCACTGTCTGTTGGTATCTTGGACCCCAGGGCCAGCCCAACCCAGCTGAATGCTGTGGAGTTTTTGTGGGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| CDS-3UTR CAA 90 bp | CCTAAGGCAGTGACCATATTCAATTCCCCTTGCCCCCAACAACCTCAACTTTCCTCAGCTCCCTTGGGCTaGAACACCTTGATCTGGCAG | + |
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Preference number: 5 (lower is better) Translates to: PKAVTIFNSPCPQQPQLSSAPLG*NTLIWQ Trigger: CTGCCAGATCAAGGTGTTCAAGCCCAAGGGAGCTGA...GGAAAGTTGAGGTTGTTGGGGGCAAGGGGAATTGAATATGGTCACTGCCTTAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| CDS-3UTR CAA 90 bp | TGCGTGGGAAACACTGGGCAGTTTCTCAAACCGGTGAAAAGTTACCTTATGAGCGAGAGCCATTGTAGCTaGGGGATGGGGTGTTGTTCG | + |
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Preference number: 5 (lower is better) Translates to: CVGNTGQFLKPVKSYLMSESHCS*GMGCCS Trigger: CGAACAACACCCCATCCCCAAGCTACAATGGCTCTC...GCTCATAAGGTAACTTTTCACCGGTTTGAGAAACTGCCCAGTGTTTCCCACGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| CDS-3UTR CAA 90 bp | GTGGGTTTCCATGACTCCCTTTCCCGTGACCTGCCACACATATTTGACCAGTCTCTGCCTTTGATGGCATaGAAGAGCCGAATCCCATCT | + |
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Preference number: 5 (lower is better) Translates to: VGFHDSLSRDLPHIFDQSLPLMA*KSRIPS Trigger: AGATGGGATTCGGCTCTTCAATGCCATCAAAGGCAG...AGACTGGTCAAATATGTGTGGCAGGTCACGGGAAAGGGAGTCATGGAAACCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| CDS CCA 90 bp | TTCTCAGTCAGCTCCAGGGTAGTCAGCTCTTCCAGGAAGATAGCATaGTATACACACAGGCTGTTATCCCCACTGTCATCCTGCTTCTGT | + |
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Preference number: 5 (lower is better) Translates to: FSVSSRVVSSSRKIA*YTHRLLSPLSSCFC Trigger: ACAGAAGCAGGATGACAGTGGGGATAACAGCCTGTGTGTATACCATGCTATCTTCCTGGAAGAGCTGACTACCCTGGAGCTGACTGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| CDS TCA 90 bp | GCTTTTAATGTGCTGAGGATAAAACAAGACTCATCTTGGAAATTCTaGACCATCTCATTGCTTACCACCACGTGGATGCCAGCGGGACCC | + |
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Preference number: 5 (lower is better) Translates to: AFNVLRIKQDSSWKF*TISLLTTTWMPAGP Trigger: GGGTCCCGCTGGCATCCACGTGGTGGTAAGCAATGAGATGGTTCAGAATTTCCAAGATGAGTCTTGTTTTATCCTCAGCACATTAAAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| CDS CCA 90 bp | AAAACGACACGGATGATGCTCTTCACATATTTCGTGTTCAGATCTTaGAAGTCCCCTAGCTTCCGATTCTCCAGCAGCCGGATTTCATAC | + |
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Preference number: 5 (lower is better) Translates to: KTTRMMLFTYFVFRS*KSPSFRFSSSRISY Trigger: GTATGAAATCCGGCTGCTGGAGAATCGGAAGCTAGGGGACTTCCAAGATCTGAACACGAAATATGTGAAGAGCATCATCCGTGTCGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| CDS-3UTR CAA 90 bp | TCCACAGAAAGCCTGTGCCAATATATTCACGACACCAACATCTCAATAAAGCTGCATAGATGGTCATCTTaGGCCTCACATTCCTGCCTT | + |
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Preference number: 5 (lower is better) Translates to: STESLCQYIHDTNISIKLHRWSS*ASHSCL Trigger: AAGGCAGGAATGTGAGGCCAAAGATGACCATCTATG...CAGCTTTATTGAGATGTTGGTGTCGTGAATATATTGGCACAGGCTTTCTGTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| CDS CCA 72 bp | GCCAAAGCTGTTGGGAGAGCCATTGTAGCTTGGGGATaGGGTGTTGTTCGCCTGGTAGGGGACGTCAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: AKAVGRAIVAWG*GVVRLVGDVRP Trigger: TGGCCTGACGTCCCCTACCAGGCGAACAACACCCCATCCCCAAGCTACAATGGCTCTCCCAACAGCTTTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| CDS CCA 72 bp | ACGGAGGCCAAAGCTGTTGGGAGAGCCATTGTAGCTTaGGGATGGGGTGTTGTTCGCCTGGTAGGGGACGTC | + |
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Preference number: 6 (lower is better) Translates to: TEAKAVGRAIVA*GWGVVRLVGDV Trigger: GACGTCCCCTACCAGGCGAACAACACCCCATCCCCAAGCTACAATGGCTCTCCCAACAGCTTTGGCCTCCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| CDS CAA 90 bp | GCACCTGAGAAGCTGGCAAAGAGCCAGCAGAATTGTGAGAAGCGGTaGCGATGCAGCCACTGCTGTGCATCCTGGATAGAGGCTGATGGG | + |
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Preference number: 6 (lower is better) Translates to: APEKLAKSQQNCEKR*RCSHCCASWIEADG Trigger: CCCATCAGCCTCTATCCAGGATGCACAGCAGTGGCTGCATCGCAACCGCTTCTCACAATTCTGCTGGCTCTTTGCCAGCTTCTCAGGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| CDS TCA 72 bp | CCCCATTCTCAGGAGATAGCTGCGGCTCTTCCTGCTTaGAGATGGGCAGAGCCAGCACATCACGCAAGTAGC | + |
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Preference number: 6 (lower is better) Translates to: PHSQEIAAALPA*RWAEPAHHASS Trigger: GCTACTTGCGTGATGTGCTGGCTCTGCCCATCTTCAAGCAGGAAGAGCCGCAGCTATCTCCTGAGAATGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| CDS GCA 72 bp | CACCGCCAACCCTCCAACTGTTGGTACTCTGTGTACTaGAGCCGGCGGTCATGGAAAACGACACGGATGATG | + |
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Preference number: 6 (lower is better) Translates to: HRQPSNCWYSVY*SRRSWKTTRMM Trigger: CATCATCCGTGTCGTTTTCCATGACCGCCGGCTGCAGTACACAGAGTACCAACAGTTGGAGGGTTGGCGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| CDS GCA 72 bp | CAGCAGAATTGTGAGAAGCGGTTGCGATGCAGCCACTaGTGTGCATCCTGGATAGAGGCTGATGGGAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: QQNCEKRLRCSH*CASWIEADGSR Trigger: CCTGCTCCCATCAGCCTCTATCCAGGATGCACAGCAGTGGCTGCATCGCAACCGCTTCTCACAATTCTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| CDS CCA 72 bp | CCCACAAAAACTCCACAGCATTCAGCTGGGTTGGGCTaGCCCTGGGGTCCAAGATACCAACAGACAGTGGAA | + |
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Preference number: 6 (lower is better) Translates to: PTKTPQHSAGLG*PWGPRYQQTVE Trigger: TTCCACTGTCTGTTGGTATCTTGGACCCCAGGGCCAGCCCAACCCAGCTGAATGCTGTGGAGTTTTTGTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| CDS GCA 72 bp | GCAAAGAGCCAGCAGAATTGTGAGAAGCGGTTGCGATaGAGCCACTGCTGTGCATCCTGGATAGAGGCTGAT | + |
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Preference number: 6 (lower is better) Translates to: AKSQQNCEKRLR*SHCCASWIEAD Trigger: ATCAGCCTCTATCCAGGATGCACAGCAGTGGCTGCATCGCAACCGCTTCTCACAATTCTGCTGGCTCTTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| CDS CAA 72 bp | AAGCTGGCAAAGAGCCAGCAGAATTGTGAGAAGCGGTaGCGATGCAGCCACTGCTGTGCATCCTGGATAGAG | + |
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Preference number: 6 (lower is better) Translates to: KLAKSQQNCEKR*RCSHCCASWIE Trigger: CTCTATCCAGGATGCACAGCAGTGGCTGCATCGCAACCGCTTCTCACAATTCTGCTGGCTCTTTGCCAGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| CDS CCA 72 bp | CGGATGATGCTCTTCACATATTTCGTGTTCAGATCTTaGAAGTCCCCTAGCTTCCGATTCTCCAGCAGCCGG | + |
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Preference number: 6 (lower is better) Translates to: RMMLFTYFVFRS*KSPSFRFSSSR Trigger: CCGGCTGCTGGAGAATCGGAAGCTAGGGGACTTCCAAGATCTGAACACGAAATATGTGAAGAGCATCATCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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| CDS CCA 72 bp | AGCTCCAGGGTAGTCAGCTCTTCCAGGAAGATAGCATaGTATACACACAGGCTGTTATCCCCACTGTCATCC | + |
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Preference number: 6 (lower is better) Translates to: SSRVVSSSRKIA*YTHRLLSPLSS Trigger: GGATGACAGTGGGGATAACAGCCTGTGTGTATACCATGCTATCTTCCTGGAAGAGCTGACTACCCTGGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027629.10 |
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