Pregenerated sensors for TFCP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000009733Ensembl transcript IDs: ENSMUST00000009877.8, ENSMUST00000229265.2, ENSMUST00000229581.2, ENSMUST00000229696.2, ENSMUST00000231174.2
Found 158 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAAGGCCTGCTGGAGCTCAGCTGGAGAAAGTGCCTGCCTAGCACGTaGGGCTCCGAGTTCAAGCCCAGCACTGCAGACAGAAACAGACCA | + |
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Preference number: 1 (lower is better) Translates to: EGLLELSWRKCLPST*GSEFKPSTADRNRP Trigger: TGGTCTGTTTCTGTCTGCAGTGCTGGGCTTGAACTCGGAGCCTCACGTGCTAGGCAGGCACTTTCTCCAGCTGAGCTCCAGCAGGCCTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| 3UTR GCA 90 bp | AGCACTAAAGGGAAGGCCTGCTGGAGCTCAGCTGGAGAAAGTGCCTaGCTAGCACGTGAGGCTCCGAGTTCAAGCCCAGCACTGCAGACA | + |
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Preference number: 1 (lower is better) Translates to: STKGKACWSSAGESA*LAREAPSSSPALQT Trigger: TGTCTGCAGTGCTGGGCTTGAACTCGGAGCCTCACGTGCTAGGCAGGCACTTTCTCCAGCTGAGCTCCAGCAGGCCTTCCCTTTAGTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| 3UTR CCA 90 bp | GCAGAGCCCCAGAAAGACCCAGTGGTGAGCACTGGCAGCAAAGGGTaGCATCTGGTGTTGTCAGAAGCCCCTCCACTTCATCTGCGTCTC | + |
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Preference number: 1 (lower is better) Translates to: AEPQKDPVVSTGSKG*HLVLSEAPPLHLRL Trigger: GAGACGCAGATGAAGTGGAGGGGCTTCTGACAACACCAGATGCCACCCTTTGCTGCCAGTGCTCACCACTGGGTCTTTCTGGGGCTCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| 3UTR GCA 90 bp | CTGTCTGTCTGGGGCTTCATTATCGCTACAGTGGTAAGGTATGGTTaGCTCCTTCAGTGGGAAGTCCGTCAGTTTCCAGCAGAGCCCCAG | + |
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Preference number: 1 (lower is better) Translates to: LSVWGFIIATVVRYG*LLQWEVRQFPAEPQ Trigger: CTGGGGCTCTGCTGGAAACTGACGGACTTCCCACTGAAGGAGGCAACCATACCTTACCACTGTAGCGATAATGAAGCCCCAGACAGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| 3UTR TCA 90 bp | GACACGCTTGTCTCTCTCACCTCTAGCTCTGGGCTGAGGTTAGTGTaGCATTGGGTGTCTGTCTGTCTGGGGCTTCATTATCGCTACAGT | + |
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Preference number: 1 (lower is better) Translates to: DTLVSLTSSSGLRLV*HWVSVCLGLHYRYS Trigger: ACTGTAGCGATAATGAAGCCCCAGACAGACAGACACCCAATGTCACACTAACCTCAGCCCAGAGCTAGAGGTGAGAGAGACAAGCGTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| 3UTR TCA 90 bp | GAGCTCTATATCACAAAACTAAACATCTTCCTAGAAAACATCACATaGCTCCCATTACCACTCTGCCCTCTACAAACCCTAATGACGGGG | + |
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Preference number: 1 (lower is better) Translates to: ELYITKLNIFLENIT*LPLPLCPLQTLMTG Trigger: CCCCGTCATTAGGGTTTGTAGAGGGCAGAGTGGTAATGGGAGTCATGTGATGTTTTCTAGGAAGATGTTTAGTTTTGTGATATAGAGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGTCCGTCAGTTTCCAGCAGAGCCCCAGAAAGACCCAGTGGTGAGCACTGGCCCCCTCCACTTCATCTaGGTCTCCTCACCCTCAAGT | + |
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Preference number: 2 (lower is better) Translates to: EVRQFPAEPQKDPVVSTGPLHFI*VSSPSS Trigger: ACTTGAGGGTGAGGAGACGCAGATGAAGTGGAGGGG...GCCAGTGCTCACCACTGGGTCTTTCTGGGGCTCTGCTGGAAACTGACGGACTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGTCCGTCAGTTTCCAGCAGAGCCCCAGAAAGACCCAGTGGTGAGCACTGGCGACGGGGCTTCTTACTaGTATCAACAGGGGCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: EVRQFPAEPQKDPVVSTGDGASY*YQQGPE Trigger: TTCTGGCCCCTGTTGATACCAGTAAGAAGCCCCGTC...GCCAGTGCTCACCACTGGGTCTTTCTGGGGCTCTGCTGGAAACTGACGGACTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCAGCACTTGGAAGGTGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACAGAGCCCAGTGGTGAGCACTaGCAGCAAAGGGTGGCATCT | + |
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Preference number: 2 (lower is better) Translates to: SQHLEGGFLSLRPAWSTEPSGEH*QQRVAS Trigger: AGATGCCACCCTTTGCTGCCAGTGCTCACCACTGGG...CTCTGTAGACCAGGCTGGCCTCAAACTCAGAAATCCACCTTCCAAGTGCTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| 3UTR-3UTR TCA 90 bp | CTATATTCCCAGCACTTGGAAGGTGGATTTCTGAGTTTGAGGCCAGCCTGGTCTGTCCCCTTCAGAAGGTaGAGAGGGGAAGGCAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: LYSQHLEGGFLSLRPAWSVPFRR*RGEGSS Trigger: GCTGCTGCCTTCCCCTCTTCACCTTCTGAAGGGGAC...AGACCAGGCTGGCCTCAAACTCAGAAATCCACCTTCCAAGTGCTGGGAATATAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| 3UTR-3UTR GCA 90 bp | CTATATTCCCAGCACTTGGAAGGTGGATTTCTGAGTTTGAGGCCAGCCTGGTCTGCTGGAGAAAGTGCCTaGCTAGCACGTGAGGCTCCG | + |
|
Preference number: 2 (lower is better) Translates to: LYSQHLEGGFLSLRPAWSAGESA*LAREAP Trigger: CGGAGCCTCACGTGCTAGGCAGGCACTTTCTCCAGC...AGACCAGGCTGGCCTCAAACTCAGAAATCCACCTTCCAAGTGCTGGGAATATAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| 3UTR-3UTR CCA 90 bp | GCTGAGGTTAGTGTGACATTGGGTGTCTGTCTGTCTGGGGCTTCATTATCGCTATCTGGGATTCCTCCTTaGGACCTGCTCGCCCTGCAC | + |
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Preference number: 2 (lower is better) Translates to: AEVSVTLGVCLSGASLSLSGIPP*DLLALH Trigger: GTGCAGGGCGAGCAGGTCCCAAGGAGGAATCCCAGA...TAGCGATAATGAAGCCCCAGACAGACAGACACCCAATGTCACACTAACCTCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| 3UTR CAA 90 bp | TCTGTCTGTCTGGGGCTTCATTATCGCTACAGTGGTAAGGTATGGTaGCCTCCTTCAGTGGGAAGTCCGTCAGTTTCCAGCAGAGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: SVCLGLHYRYSGKVW*PPSVGSPSVSSRAP Trigger: TGGGGCTCTGCTGGAAACTGACGGACTTCCCACTGAAGGAGGCAACCATACCTTACCACTGTAGCGATAATGAAGCCCCAGACAGACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| 3UTR-3UTR GCA 90 bp | CCTCCTCACAGTTGTGAACAGAGCAGAGCAGAGCTGCCAACAGGCTTGAGGCAACCCAACATTCAGATGTaGCAGGTTCCTGAAGCCCTT | + |
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Preference number: 2 (lower is better) Translates to: PPHSCEQSRAELPTGLRQPNIQM*QVPEAL Trigger: AAGGGCTTCAGGAACCTGGCACATCTGAATGTTGGG...TTGCCTCAAGCCTGTTGGCAGCTCTGCTCTGCTCTGTTCACAACTGTGAGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCAGCACTTGGAAGGTGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACAGAGGACGGGGCTTCTTACTaGTATCAACAGGGGCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: SQHLEGGFLSLRPAWSTEDGASY*YQQGPE Trigger: TTCTGGCCCCTGTTGATACCAGTAAGAAGCCCCGTC...CTCTGTAGACCAGGCTGGCCTCAAACTCAGAAATCCACCTTCCAAGTGCTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| 3UTR-3UTR CCA 90 bp | CATCTGCGTCTCCTCACCCTCAAGTCACTGTGTCCCCAGATGTTTTGGGTTTATCTGCTGGAGCTCAGCTaGAGAAAGTGCCTGCCTAGC | + |
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Preference number: 2 (lower is better) Translates to: HLRLLTLKSLCPQMFWVYLLELS*RKCLPS Trigger: GCTAGGCAGGCACTTTCTCCAGCTGAGCTCCAGCAG...ATAAACCCAAAACATCTGGGGACACAGTGACTTGAGGGTGAGGAGACGCAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| 3UTR-3UTR TCA 90 bp | CATCTGCGTCTCCTCACCCTCAAGTCACTGTGTCCCCAGATGTTTTGGGTTTATAGCTGCCAACAGGCTTaGGGCAAGAGAGAGAGCTTG | + |
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Preference number: 2 (lower is better) Translates to: HLRLLTLKSLCPQMFWVYSCQQA*GKRESL Trigger: CAAGCTCTCTCTCTTGCCTCAAGCCTGTTGGCAGCT...ATAAACCCAAAACATCTGGGGACACAGTGACTTGAGGGTGAGGAGACGCAGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| 3UTR-3UTR GCA 90 bp | CTATATTCCCAGCACTTGGAAGGTGGATTTCTGAGTTTGAGGCCAGCCTGGTCTGTTCAAGCCCAGCACTaGAGACAGAAACAGACCAGG | + |
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Preference number: 2 (lower is better) Translates to: LYSQHLEGGFLSLRPAWSVQAQH*RQKQTR Trigger: CCTGGTCTGTTTCTGTCTGCAGTGCTGGGCTTGAAC...AGACCAGGCTGGCCTCAAACTCAGAAATCCACCTTCCAAGTGCTGGGAATATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| 3UTR-3UTR GCA 90 bp | TCATCTGCGTCTCCTCACCCTCAAGTCACTGTGTCCCCAGATGTTTTGGGTTTAACTAAAGGGAAGGCCTaGTGGAGCTCAGCTGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: SSASPHPQVTVSPDVLGLTKGKA*WSSAGE Trigger: TTCTCCAGCTGAGCTCCAGCAGGCCTTCCCTTTAGT...TAAACCCAAAACATCTGGGGACACAGTGACTTGAGGGTGAGGAGACGCAGATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| 3UTR CAA 90 bp | CCTCCTCACAGTTGTGAACAGAGCAGAGCAGAGCTGCCAACAGGCTaGAGGCAAGAGAGAGAGCTTGGTTTTATGAAGACAGATGTTCAC | + |
|
Preference number: 2 (lower is better) Translates to: PPHSCEQSRAELPTG*RQERELGFMKTDVH Trigger: GTGAACATCTGTCTTCATAAAACCAAGCTCTCTCTCTTGCCTCAAGCCTGTTGGCAGCTCTGCTCTGCTCTGTTCACAACTGTGAGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| 3UTR-3UTR TCA 90 bp | CATCACATGACTCCCATTACCACTCTGCCCTCTACAAACCCTAATGACGGGGCTTCCATGTATAGCCAGTaGTCAGAGGAGCCAATACAG | + |
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Preference number: 2 (lower is better) Translates to: HHMTPITTLPSTNPNDGASMYSQ*SEEPIQ Trigger: CTGTATTGGCTCCTCTGATCACTGGCTATACATGGA...AGCCCCGTCATTAGGGTTTGTAGAGGGCAGAGTGGTAATGGGAGTCATGTGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| 3UTR-3UTR TCA 90 bp | TCCCAGCACTTGGAAGGTGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACAGAGCTAGAAAACATCACATaGCTCCCATTACCACTCTGC | + |
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Preference number: 2 (lower is better) Translates to: SQHLEGGFLSLRPAWSTELENIT*LPLPLC Trigger: GCAGAGTGGTAATGGGAGTCATGTGATGTTTTCTAG...CTCTGTAGACCAGGCTGGCCTCAAACTCAGAAATCCACCTTCCAAGTGCTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| 3UTR-3UTR CCA 90 bp | CACTCAGCTGTGGTATTGCAGGTGAACCAAATTAGAAATCTGGAGCCTGTCTTACTGCTGGAGCTCAGCTaGAGAAAGTGCCTGCCTAGC | + |
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Preference number: 2 (lower is better) Translates to: HSAVVLQVNQIRNLEPVLLLELS*RKCLPS Trigger: GCTAGGCAGGCACTTTCTCCAGCTGAGCTCCAGCAG...TAAGACAGGCTCCAGATTTCTAATTTGGTTCACCTGCAATACCACAGCTGAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| 3UTR-3UTR TCA 90 bp | CACTCAGCTGTGGTATTGCAGGTGAACCAAATTAGAAATCTGGAGCCTGTCTTAGGTGGCAAAAGCTTGTaGTCCCAGCTCTTGGGAGGT | + |
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Preference number: 2 (lower is better) Translates to: HSAVVLQVNQIRNLEPVLGGKSL*SQLLGG Trigger: ACCTCCCAAGAGCTGGGATCACAAGCTTTTGCCACC...TAAGACAGGCTCCAGATTTCTAATTTGGTTCACCTGCAATACCACAGCTGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| 3UTR-3UTR TCA 90 bp | TCCCAGCACTTGGAAGGTGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACAGAGCTGTGGTATTGCAGGTaGACCAAATTAGAAATCTGG | + |
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Preference number: 2 (lower is better) Translates to: SQHLEGGFLSLRPAWSTELWYCR*TKLEIW Trigger: CCAGATTTCTAATTTGGTTCACCTGCAATACCACAG...CTCTGTAGACCAGGCTGGCCTCAAACTCAGAAATCCACCTTCCAAGTGCTGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGAAAAAGGAGGGCCTAAGTGCTTTACAATTCTGTACATGCACACAGACACAAAAGGGAAGGCCTGCTaGAGCTCAGCTGGAGAAAGT | + |
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Preference number: 2 (lower is better) Translates to: CEKGGPKCFTILYMHTDTKGKAC*SSAGES Trigger: ACTTTCTCCAGCTGAGCTCCAGCAGGCCTTCCCTTT...TGTGTCTGTGTGCATGTACAGAATTGTAAAGCACTTAGGCCCTCCTTTTTCACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGAAAAAGGAGGGCCTAAGTGCTTTACAATTCTGTACATGCACACAGACACAGTGGTAAGGTATGGTTaGCTCCTTCAGTGGGAAGTC | + |
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Preference number: 2 (lower is better) Translates to: CEKGGPKCFTILYMHTDTVVRYG*LLQWEV Trigger: GACTTCCCACTGAAGGAGGCAACCATACCTTACCAC...TGTGTCTGTGTGCATGTACAGAATTGTAAAGCACTTAGGCCCTCCTTTTTCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| 3UTR-3UTR CCA 90 bp | CACTCAGCTGTGGTATTGCAGGTGAACCAAATTAGAAATCTGGAGCCTGTCTTACAGAAACAGACCAGGTaGCAAAAGCTTGTGATCCCA | + |
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Preference number: 2 (lower is better) Translates to: HSAVVLQVNQIRNLEPVLQKQTR*QKLVIP Trigger: TGGGATCACAAGCTTTTGCCACCTGGTCTGTTTCTG...TAAGACAGGCTCCAGATTTCTAATTTGGTTCACCTGCAATACCACAGCTGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGAAAAAGGAGGGCCTAAGTGCTTTACAATTCTGTACATGCACACAGACACAGCAAGAGAGAGAGCTTaGTTTTATGAAGACAGATGT | + |
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Preference number: 2 (lower is better) Translates to: CEKGGPKCFTILYMHTDTARERA*FYEDRC Trigger: ACATCTGTCTTCATAAAACCAAGCTCTCTCTCTTGC...TGTGTCTGTGTGCATGTACAGAATTGTAAAGCACTTAGGCCCTCCTTTTTCACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| 3UTR GCA 72 bp | GGGAAGGCCTGCTGGAGCTCAGCTGGAGAAAGTGCCTaGCTAGCACGTGAGGCTCCGAGTTCAAGCCCAGCA | + |
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Preference number: 3 (lower is better) Translates to: GKACWSSAGESA*LAREAPSSSPA Trigger: TGCTGGGCTTGAACTCGGAGCCTCACGTGCTAGGCAGGCACTTTCTCCAGCTGAGCTCCAGCAGGCCTTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| 3UTR CCA 72 bp | TCAGAGGAGCCAATACAGGACTCTGGGATTCCTCCTTaGGACCTGCTCGCCCTGCACTGGACACGCCTCCCC | + |
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Preference number: 3 (lower is better) Translates to: SEEPIQDSGIPP*DLLALHWTRLP Trigger: GGGGAGGCGTGTCCAGTGCAGGGCGAGCAGGTCCCAAGGAGGAATCCCAGAGTCCTGTATTGGCTCCTCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| 3UTR CCA 72 bp | TCCAGCAGAGCCCCAGAAAGACCCAGTGGTGAGCACTaGCAGCAAAGGGTGGCATCTGGTGTTGTCAGAAGC | + |
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Preference number: 3 (lower is better) Translates to: SSRAPERPSGEH*QQRVASGVVRS Trigger: GCTTCTGACAACACCAGATGCCACCCTTTGCTGCCAGTGCTCACCACTGGGTCTTTCTGGGGCTCTGCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| 3UTR TCA 72 bp | AGCCCTTTAATCTCCAGTCATGTCCCCTTCAGAAGGTaGAGAGGGGAAGGCAGCAGCAGCCGTCGAAGGTCG | + |
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Preference number: 3 (lower is better) Translates to: SPLISSHVPFRR*RGEGSSSRRRS Trigger: CGACCTTCGACGGCTGCTGCTGCCTTCCCCTCTTCACCTTCTGAAGGGGACATGACTGGAGATTAAAGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| 3UTR TCA 72 bp | GTCAGTTTCCAGCAGAGCCCCAGAAAGACCCAGTGGTaGGCACTGGCAGCAAAGGGTGGCATCTGGTGTTGT | + |
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Preference number: 3 (lower is better) Translates to: VSFQQSPRKTQW*ALAAKGGIWCC Trigger: ACAACACCAGATGCCACCCTTTGCTGCCAGTGCTCACCACTGGGTCTTTCTGGGGCTCTGCTGGAAACTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| 3UTR GCA 72 bp | GGCATCTGGTGTTGTCAGAAGCCCCTCCACTTCATCTaGGTCTCCTCACCCTCAAGTCACTGTGTCCCCAGA | + |
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Preference number: 3 (lower is better) Translates to: GIWCCQKPLHFI*VSSPSSHCVPR Trigger: TCTGGGGACACAGTGACTTGAGGGTGAGGAGACGCAGATGAAGTGGAGGGGCTTCTGACAACACCAGATGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| 3UTR CCA 72 bp | TCTGGAGCCTGTCTTAGCACTAAAGGGAAGGCCTGCTaGAGCTCAGCTGGAGAAAGTGCCTGCCTAGCACGT | + |
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Preference number: 3 (lower is better) Translates to: SGACLSTKGKAC*SSAGESACLAR Trigger: ACGTGCTAGGCAGGCACTTTCTCCAGCTGAGCTCCAGCAGGCCTTCCCTTTAGTGCTAAGACAGGCTCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| 3UTR CCA 72 bp | CAGAAAGACCCAGTGGTGAGCACTGGCAGCAAAGGGTaGCATCTGGTGTTGTCAGAAGCCCCTCCACTTCAT | + |
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Preference number: 3 (lower is better) Translates to: QKDPVVSTGSKG*HLVLSEAPPLH Trigger: ATGAAGTGGAGGGGCTTCTGACAACACCAGATGCCACCCTTTGCTGCCAGTGCTCACCACTGGGTCTTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| 3UTR-3UTR CAA 90 bp | TCCCAGCACTTGGAAGGTGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACAGAGGAGCTGCCAACAGGCTaGAGGCAAGAGAGAGAGCTT | + |
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Preference number: 3 (lower is better) Translates to: SQHLEGGFLSLRPAWSTEELPTG*RQEREL Trigger: AAGCTCTCTCTCTTGCCTCAAGCCTGTTGGCAGCTC...CTCTGTAGACCAGGCTGGCCTCAAACTCAGAAATCCACCTTCCAAGTGCTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| 3UTR-3UTR CAA 90 bp | TCCCAGCACTTGGAAGGTGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACAGAGGAGGTTAGTGTGACATaGGGTGTCTGTCTGTCTGGG | + |
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Preference number: 3 (lower is better) Translates to: SQHLEGGFLSLRPAWSTEEVSVT*GVCLSG Trigger: CCCAGACAGACAGACACCCAATGTCACACTAACCTC...CTCTGTAGACCAGGCTGGCCTCAAACTCAGAAATCCACCTTCCAAGTGCTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| 3UTR CCA 72 bp | ATCGCTACAGTGGTAAGGTATGGTTGCCTCCTTCAGTaGGAAGTCCGTCAGTTTCCAGCAGAGCCCCAGAAA | + |
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Preference number: 3 (lower is better) Translates to: IATVVRYGCLLQ*EVRQFPAEPQK Trigger: TTTCTGGGGCTCTGCTGGAAACTGACGGACTTCCCACTGAAGGAGGCAACCATACCTTACCACTGTAGCGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| 3UTR TCA 72 bp | ACTGCAGACAGAAACAGACCAGGTGGCAAAAGCTTGTaGTCCCAGCTCTTGGGAGGTAGAGGCAAGAACATG | + |
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Preference number: 3 (lower is better) Translates to: TADRNRPGGKSL*SQLLGGRGKNM Trigger: CATGTTCTTGCCTCTACCTCCCAAGAGCTGGGATCACAAGCTTTTGCCACCTGGTCTGTTTCTGTCTGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| 3UTR GCA 72 bp | TGGGGCTTCATTATCGCTACAGTGGTAAGGTATGGTTaGCTCCTTCAGTGGGAAGTCCGTCAGTTTCCAGCA | + |
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Preference number: 3 (lower is better) Translates to: WGFIIATVVRYG*LLQWEVRQFPA Trigger: TGCTGGAAACTGACGGACTTCCCACTGAAGGAGGCAACCATACCTTACCACTGTAGCGATAATGAAGCCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| 3UTR-3UTR CAA 90 bp | GCTGAGGTTAGTGTGACATTGGGTGTCTGTCTGTCTGGGGCTTCATTATCGCTAAGTGGTAAGGTATGGTaGCCTCCTTCAGTGGGAAGT | + |
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Preference number: 3 (lower is better) Translates to: AEVSVTLGVCLSGASLSLSGKVW*PPSVGS Trigger: ACTTCCCACTGAAGGAGGCAACCATACCTTACCACT...TAGCGATAATGAAGCCCCAGACAGACAGACACCCAATGTCACACTAACCTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| 3UTR-3UTR CAA 90 bp | CACTCAGCTGTGGTATTGCAGGTGAACCAAATTAGAAATCTGGAGCCTGTCTTAGAGCTGCCAACAGGCTaGAGGCAAGAGAGAGAGCTT | + |
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Preference number: 3 (lower is better) Translates to: HSAVVLQVNQIRNLEPVLELPTG*RQEREL Trigger: AAGCTCTCTCTCTTGCCTCAAGCCTGTTGGCAGCTC...TAAGACAGGCTCCAGATTTCTAATTTGGTTCACCTGCAATACCACAGCTGAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| 3UTR TCA 72 bp | GAGCAGGGCGGAATAGCTCATTTACTTAAACAGTTTTaGGAATATCATTCACGAACAACGAAGCCTGGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: EQGGIAHLLKQF*EYHSRTTKPGV Trigger: GACCCCAGGCTTCGTTGTTCGTGAATGATATTCTCAAAACTGTTTAAGTAAATGAGCTATTCCGCCCTGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| 3UTR TCA 72 bp | ATCACAAAACTAAACATCTTCCTAGAAAACATCACATaGCTCCCATTACCACTCTGCCCTCTACAAACCCTA | + |
|
Preference number: 3 (lower is better) Translates to: ITKLNIFLENIT*LPLPLCPLQTL Trigger: TAGGGTTTGTAGAGGGCAGAGTGGTAATGGGAGTCATGTGATGTTTTCTAGGAAGATGTTTAGTTTTGTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR CCA 90 bp | ACAGGACTCTGGGATTCCTCCTTGGGACCTGCTCGCCCTGCACTGGACACGCCTCGTGACTGGAGGGGGTaGTTCTGGCTGGTGGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TGLWDSSLGPARPALDTPRDWRG*FWLVVG Trigger: CCCAACCACCAGCCAGAACCACCCCCTCCAGTCACG...AGGCGTGTCCAGTGCAGGGCGAGCAGGTCCCAAGGAGGAATCCCAGAGTCCTGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR CCA 90 bp | ACAGGACTCTGGGATTCCTCCTTGGGACCTGCTCGCCCTGCACTGGACACGCCTGTCAGGGTCTCGTCGTaGAGCTTCACCGCTGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: TGLWDSSLGPARPALDTPVRVSS*SFTAGD Trigger: GTCTCCAGCGGTGAAGCTCCACGACGAGACCCTGAC...AGGCGTGTCCAGTGCAGGGCGAGCAGGTCCCAAGGAGGAATCCCAGAGTCCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR GCA 90 bp | CTGCTGGCTCCATGTATAGCCAGTGATCAGAGGAGCCAATACAGGACTCTGGGAGGCTGCGGCTGCGGCTaGGGCTGCTGCTCCCTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LLAPCIASDQRSQYRTLGGCGCG*GCCSLN Trigger: GTTGAGGGAGCAGCAGCCGCAGCCGCAGCCGCAGCC...TCCCAGAGTCCTGTATTGGCTCCTCTGATCACTGGCTATACATGGAGCCAGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR CCA 90 bp | AATCTCCAGTCATGTCCCCTTCAGAAGGTGAAGAGGGGAAGGCAGCAGCAGCCGTGGAGGGGGTGGTTCTaGCTGGTGGTTGGGCGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NLQSCPLQKVKRGRQQQPWRGWF*LVVGRA Trigger: GGCTCGCCCAACCACCAGCCAGAACCACCCCCTCCA...CGGCTGCTGCTGCCTTCCCCTCTTCACCTTCTGAAGGGGACATGACTGGAGATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| 3UTR CAA 72 bp | ATCAGAGGAGCCAATACAGGACTCTGGGATTCCTCCTaGGGACCTGCTCGCCCTGCACTGGACACGCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: IRGANTGLWDSS*GPARPALDTPP Trigger: GGGAGGCGTGTCCAGTGCAGGGCGAGCAGGTCCCAAGGAGGAATCCCAGAGTCCTGTATTGGCTCCTCTGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR TCA 90 bp | GGAGCCAATACAGGACTCTGGGATTCCTCCTTGGGACCTGCTCGCCCTGCACTGGCAAGAGGTTATCCGTaGCTGGAGGGGGTGGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GANTGLWDSSLGPARPALARGYP*LEGVVL Trigger: CAGAACCACCCCCTCCAGTCACGGATAACCTCTTGC...CAGTGCAGGGCGAGCAGGTCCCAAGGAGGAATCCCAGAGTCCTGTATTGGCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR CCA 90 bp | AATCTCCAGTCATGTCCCCTTCAGAAGGTGAAGAGGGGAAGGCAGCAGCAGCCGCGTGACTGGAGGGGGTaGTTCTGGCTGGTGGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NLQSCPLQKVKRGRQQQPRDWRG*FWLVVG Trigger: CCCAACCACCAGCCAGAACCACCCCCTCCAGTCACG...CGGCTGCTGCTGCCTTCCCCTCTTCACCTTCTGAAGGGGACATGACTGGAGATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR TCA 90 bp | AATCTCCAGTCATGTCCCCTTCAGAAGGTGAAGAGGGGAAGGCAGCAGCAGCCGCATTGCTGGGCTTCCTaGGGCGTGGTTGTCGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: NLQSCPLQKVKRGRQQQPHCWAS*GVVVGK Trigger: CTTGCCGACAACCACGCCTCAGGAAGCCCAGCAATG...CGGCTGCTGCTGCCTTCCCCTCTTCACCTTCTGAAGGGGACATGACTGGAGATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR GCA 90 bp | GGAGCCAATACAGGACTCTGGGATTCCTCCTTGGGACCTGCTCGCCCTGCACTGTGCTGCTCCCTCAACTaGAACGACTCCTGGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: GANTGLWDSSLGPARPALCCSLN*NDSWQT Trigger: TGTCTGCCAGGAGTCGTTGCAGTTGAGGGAGCAGCA...CAGTGCAGGGCGAGCAGGTCCCAAGGAGGAATCCCAGAGTCCTGTATTGGCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR TCA 90 bp | GGAGCCAATACAGGACTCTGGGATTCCTCCTTGGGACCTGCTCGCCCTGCACTGCACAGATGTCCTCTTTaGAGGGTCCCACAGGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: GANTGLWDSSLGPARPALHRCPL*RVPQEL Trigger: GAGTTCCTGTGGGACCCTTCAAAGAGGACATCTGTG...CAGTGCAGGGCGAGCAGGTCCCAAGGAGGAATCCCAGAGTCCTGTATTGGCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR TCA 90 bp | GGAGCCAATACAGGACTCTGGGATTCCTCCTTGGGACCTGCTCGCCCTGCACTGCGTTCCCGTTCTCCTTaGAGGTATCGATCTGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: GANTGLWDSSLGPARPALRSRSP*RYRSAL Trigger: GAGTGCAGATCGATACCTTCAAGGAGAACGGGAACG...CAGTGCAGGGCGAGCAGGTCCCAAGGAGGAATCCCAGAGTCCTGTATTGGCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR GCA 90 bp | TCCCAGCACTTGGAAGGTGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACAGAGTGCGGCTGCGGCTGCTaGTCCCTCAACTGCAACGAC | + |
|
Preference number: 4 (lower is better) Translates to: SQHLEGGFLSLRPAWSTECGCGC*SLNCND Trigger: GTCGTTGCAGTTGAGGGAGCAGCAGCCGCAGCCGCA...CTCTGTAGACCAGGCTGGCCTCAAACTCAGAAATCCACCTTCCAAGTGCTGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR CCA 90 bp | ACAGGACTCTGGGATTCCTCCTTGGGACCTGCTCGCCCTGCACTGGACACGCCTGTTGAAGCCAGGGGATaGGGAATTGTTGACGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TGLWDSSLGPARPALDTPVEARG*GIVDVG Trigger: ACCTACGTCAACAATTCCCCATCCCCTGGCTTCAAC...AGGCGTGTCCAGTGCAGGGCGAGCAGGTCCCAAGGAGGAATCCCAGAGTCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR TCA 90 bp | ACAGGACTCTGGGATTCCTCCTTGGGACCTGCTCGCCCTGCACTGGACACGCCTATCTGGCTGATCTGGTaGGGAGAAATGCTGAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TGLWDSSLGPARPALDTPIWLIW*GEMLKS Trigger: GCTTTTCAGCATTTCTCCTCACCAGATCAGCCAGAT...AGGCGTGTCCAGTGCAGGGCGAGCAGGTCCCAAGGAGGAATCCCAGAGTCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR TCA 90 bp | ACAGGACTCTGGGATTCCTCCTTGGGACCTGCTCGCCCTGCACTGGACACGCCTGCTTGTAAATCTGGCTaGTCTGGTGAGGAGAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: TGLWDSSLGPARPALDTPACKSG*SGEEKC Trigger: GCATTTCTCCTCACCAGATCAGCCAGATTTACAAGC...AGGCGTGTCCAGTGCAGGGCGAGCAGGTCCCAAGGAGGAATCCCAGAGTCCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR CCA 90 bp | GGAGCCAATACAGGACTCTGGGATTCCTCCTTGGGACCTGCTCGCCCTGCACTGTTGAAGACTTTGATCTaGCAGCTGGCCGAGTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GANTGLWDSSLGPARPALLKTLI*QLAECK Trigger: CTTGCACTCGGCCAGCTGCCAGATCAAAGTCTTCAA...CAGTGCAGGGCGAGCAGGTCCCAAGGAGGAATCCCAGAGTCCTGTATTGGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR GCA 90 bp | CTATATTCCCAGCACTTGGAAGGTGGATTTCTGAGTTTGAGGCCAGCCTGGTCTTGCGGCTGCGGCTGCTaGTCCCTCAACTGCAACGAC | + |
|
Preference number: 4 (lower is better) Translates to: LYSQHLEGGFLSLRPAWSCGCGC*SLNCND Trigger: GTCGTTGCAGTTGAGGGAGCAGCAGCCGCAGCCGCA...AGACCAGGCTGGCCTCAAACTCAGAAATCCACCTTCCAAGTGCTGGGAATATAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR GCA 90 bp | CACTCAGCTGTGGTATTGCAGGTGAACCAAATTAGAAATCTGGAGCCTGTCTTAGGCTGCGGCTGCGGCTaGGGCTGCTGCTCCCTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: HSAVVLQVNQIRNLEPVLGCGCG*GCCSLN Trigger: GTTGAGGGAGCAGCAGCCGCAGCCGCAGCCGCAGCC...TAAGACAGGCTCCAGATTTCTAATTTGGTTCACCTGCAATACCACAGCTGAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR CCA 90 bp | CCTCCTCACAGTTGTGAACAGAGCAGAGCAGAGCTGCCAACAGGCTTGAGGCAAGGGCTTCCTGAGGCGTaGTTGTCGGCAAGAGGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: PPHSCEQSRAELPTGLRQGLPEA*LSARGY Trigger: ATAACCTCTTGCCGACAACCACGCCTCAGGAAGCCC...TTGCCTCAAGCCTGTTGGCAGCTCTGCTCTGCTCTGTTCACAACTGTGAGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR CCA 90 bp | AATCTCCAGTCATGTCCCCTTCAGAAGGTGAAGAGGGGAAGGCAGCAGCAGCCGCCTGGCAGACATAAATaGTTAGCCTTGGCCGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: NLQSCPLQKVKRGRQQQPPGRHK*LALAAP Trigger: TGGTGCGGCCAAGGCTAACCATTTATGTCTGCCAGG...CGGCTGCTGCTGCCTTCCCCTCTTCACCTTCTGAAGGGGACATGACTGGAGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR TCA 90 bp | CTATATTCCCAGCACTTGGAAGGTGGATTTCTGAGTTTGAGGCCAGCCTGGTCTCATTGCTGGGCTTCCTaGGGCGTGGTTGTCGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LYSQHLEGGFLSLRPAWSHCWAS*GVVVGK Trigger: CTTGCCGACAACCACGCCTCAGGAAGCCCAGCAATG...AGACCAGGCTGGCCTCAAACTCAGAAATCCACCTTCCAAGTGCTGGGAATATAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR GCA 90 bp | TCCCAGCACTTGGAAGGTGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACAGAGTTGAAGGTATCGATCTaGACTCGGAACGGCACCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SQHLEGGFLSLRPAWSTELKVSI*TRNGTP Trigger: GGGGGTGCCGTTCCGAGTGCAGATCGATACCTTCAA...CTCTGTAGACCAGGCTGGCCTCAAACTCAGAAATCCACCTTCCAAGTGCTGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR CCA 90 bp | TCATCTGCGTCTCCTCACCCTCAAGTCACTGTGTCCCCAGATGTTTTGGGTTTACCAGCACCCAGTTCCTaGCCAATGCCGGACAGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SSASPHPQVTVSPDVLGLPAPSS*PMPDRL Trigger: TAGCCTGTCCGGCATTGGCCAGGAACTGGGTGCTGG...TAAACCCAAAACATCTGGGGACACAGTGACTTGAGGGTGAGGAGACGCAGATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR CCA 90 bp | GCTTCTTACTGGTATCAACAGGGGCCAGAAAGTAAGGAAACTGCTGGCTCCATGGTGGAGCTTCACCGCTaGAGACGTGGCAGCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ASYWYQQGPESKETAGSMVELHR*RRGSTE Trigger: CTCTGTGCTGCCACGTCTCCAGCGGTGAAGCTCCAC...CATGGAGCCAGCAGTTTCCTTACTTTCTGGCCCCTGTTGATACCAGTAAGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR CCA 90 bp | CATCTGCGTCTCCTCACCCTCAAGTCACTGTGTCCCCAGATGTTTTGGGTTTATGTGGAGCTTCACCGCTaGAGACGTGGCAGCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HLRLLTLKSLCPQMFWVYVELHR*RRGSTE Trigger: CTCTGTGCTGCCACGTCTCCAGCGGTGAAGCTCCAC...ATAAACCCAAAACATCTGGGGACACAGTGACTTGAGGGTGAGGAGACGCAGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR CCA 90 bp | GGAGCCAATACAGGACTCTGGGATTCCTCCTTGGGACCTGCTCGCCCTGCACTGCATGATAGCTGTCACTaGTTTCTGCTTCCATCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GANTGLWDSSLGPARPALHDSCH*FLLPSC Trigger: ACACGATGGAAGCAGAAACCAGTGACAGCTATCATG...CAGTGCAGGGCGAGCAGGTCCCAAGGAGGAATCCCAGAGTCCTGTATTGGCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR TCA 90 bp | AATCTCCAGTCATGTCCCCTTCAGAAGGTGAAGAGGGGAAGGCAGCAGCAGCCGCTGATGCAGTGCACCTaGATAAACACAGATGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: NLQSCPLQKVKRGRQQQPLMQCT*INTDVL Trigger: GAGGACATCTGTGTTTATTCAGGTGCACTGCATCAG...CGGCTGCTGCTGCCTTCCCCTCTTCACCTTCTGAAGGGGACATGACTGGAGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR TCA 90 bp | CTATATTCCCAGCACTTGGAAGGTGGATTTCTGAGTTTGAGGCCAGCCTGGTCTGCAAGAGGTTATCCGTaGCTGGAGGGGGTGGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LYSQHLEGGFLSLRPAWSARGYP*LEGVVL Trigger: CAGAACCACCCCCTCCAGTCACGGATAACCTCTTGC...AGACCAGGCTGGCCTCAAACTCAGAAATCCACCTTCCAAGTGCTGGGAATATAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR TCA 90 bp | AATCTCCAGTCATGTCCCCTTCAGAAGGTGAAGAGGGGAAGGCAGCAGCAGCCGATCTGGCTGATCTGGTaGGGAGAAATGCTGAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: NLQSCPLQKVKRGRQQQPIWLIW*GEMLKS Trigger: GCTTTTCAGCATTTCTCCTCACCAGATCAGCCAGAT...CGGCTGCTGCTGCCTTCCCCTCTTCACCTTCTGAAGGGGACATGACTGGAGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR CCA 90 bp | CCTCCTCACAGTTGTGAACAGAGCAGAGCAGAGCTGCCAACAGGCTTGAGGCAAGTTGAAGCCAGGGGATaGGGAATTGTTGACGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PPHSCEQSRAELPTGLRQVEARG*GIVDVG Trigger: ACCTACGTCAACAATTCCCCATCCCCTGGCTTCAAC...TTGCCTCAAGCCTGTTGGCAGCTCTGCTCTGCTCTGTTCACAACTGTGAGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR CCA 90 bp | GAAGTCCGTCAGTTTCCAGCAGAGCCCCAGAAAGACCCAGTGGTGAGCACTGGCAAGCAGGCTTCTTCCTaGAAGTTCTGTACCATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: EVRQFPAEPQKDPVVSTGKQASS*KFCTIS Trigger: TGAGATGGTACAGAACTTCCAGGAAGAAGCCTGCTT...GCCAGTGCTCACCACTGGGTCTTTCTGGGGCTCTGCTGGAAACTGACGGACTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| 3UTR CAA 72 bp | CTGGGGCTTCATTATCGCTACAGTGGTAAGGTATGGTaGCCTCCTTCAGTGGGAAGTCCGTCAGTTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LGLHYRYSGKVW*PPSVGSPSVSS Trigger: GCTGGAAACTGACGGACTTCCCACTGAAGGAGGCAACCATACCTTACCACTGTAGCGATAATGAAGCCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR GCA 90 bp | CTATATTCCCAGCACTTGGAAGGTGGATTTCTGAGTTTGAGGCCAGCCTGGTCTTGGTGCTCAGTGTACTaGAGTCGCCTGTCGTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LYSQHLEGGFLSLRPAWSWCSVY*SRLSWN Trigger: GTTCCACGACAGGCGACTGCAGTACACTGAGCACCA...AGACCAGGCTGGCCTCAAACTCAGAAATCCACCTTCCAAGTGCTGGGAATATAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR GCA 90 bp | TCCCAGCACTTGGAAGGTGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACAGAGGAGTCTGATTCCATCTaGAGGGCCGCAGATTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SQHLEGGFLSLRPAWSTEESDSI*RAADLD Trigger: ATCCAAATCTGCGGCCCTGCAGATGGAATCAGACTC...CTCTGTAGACCAGGCTGGCCTCAAACTCAGAAATCCACCTTCCAAGTGCTGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR GCA 90 bp | CATCTGCGTCTCCTCACCCTCAAGTCACTGTGTCCCCAGATGTTTTGGGTTTATTGCTGCTCCCTCAACTaGAACGACTCCTGGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: HLRLLTLKSLCPQMFWVYCCSLN*NDSWQT Trigger: TGTCTGCCAGGAGTCGTTGCAGTTGAGGGAGCAGCA...ATAAACCCAAAACATCTGGGGACACAGTGACTTGAGGGTGAGGAGACGCAGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR CCA 90 bp | TCCCAGCACTTGGAAGGTGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACAGAGAGAGAGAAACTGCTATaGGAGCTGTTGAAGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SQHLEGGFLSLRPAWSTEREKLL*ELLKPG Trigger: CCCTGGCTTCAACAGCTCCCATAGCAGTTTCTCTCT...CTCTGTAGACCAGGCTGGCCTCAAACTCAGAAATCCACCTTCCAAGTGCTGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR CCA 90 bp | TGTGAAAAAGGAGGGCCTAAGTGCTTTACAATTCTGTACATGCACACAGACACATGGAGGGGGTGGTTCTaGCTGGTGGTTGGGCGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CEKGGPKCFTILYMHTDTWRGWF*LVVGRA Trigger: GGCTCGCCCAACCACCAGCCAGAACCACCCCCTCCA...TGTGTCTGTGTGCATGTACAGAATTGTAAAGCACTTAGGCCCTCCTTTTTCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR CCA 90 bp | TCATCTGCGTCTCCTCACCCTCAAGTCACTGTGTCCCCAGATGTTTTGGGTTTAGGGCTTCCTGAGGCGTaGTTGTCGGCAAGAGGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: SSASPHPQVTVSPDVLGLGLPEA*LSARGY Trigger: ATAACCTCTTGCCGACAACCACGCCTCAGGAAGCCC...TAAACCCAAAACATCTGGGGACACAGTGACTTGAGGGTGAGGAGACGCAGATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR TCA 90 bp | GAAGTCCGTCAGTTTCCAGCAGAGCCCCAGAAAGACCCAGTGGTGAGCACTGGCATCGGGAGGCAAACTTaGCTCTTCTTGCTTAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: EVRQFPAEPQKDPVVSTGIGRQT*LFLLKN Trigger: ATTTTTAAGCAAGAAGAGTCAAGTTTGCCTCCCGAT...GCCAGTGCTCACCACTGGGTCTTTCTGGGGCTCTGCTGGAAACTGACGGACTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR TCA 90 bp | GCTGAGGTTAGTGTGACATTGGGTGTCTGTCTGTCTGGGGCTTCATTATCGCTACGTTCCCGTTCTCCTTaGAGGTATCGATCTGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: AEVSVTLGVCLSGASLSLRSRSP*RYRSAL Trigger: GAGTGCAGATCGATACCTTCAAGGAGAACGGGAACG...TAGCGATAATGAAGCCCCAGACAGACAGACACCCAATGTCACACTAACCTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR TCA 90 bp | CTGCTGGCTCCATGTATAGCCAGTGATCAGAGGAGCCAATACAGGACTCTGGGAGAAGAAAGTACCGTTTaGATCCCCATCCTCCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLAPCIASDQRSQYRTLGEESTV*IPILLL Trigger: AAGCAGGAGGATGGGGATTCAAACGGTACTTTCTTC...TCCCAGAGTCCTGTATTGGCTCCTCTGATCACTGGCTATACATGGAGCCAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR TCA 90 bp | CTGCTGGCTCCATGTATAGCCAGTGATCAGAGGAGCCAATACAGGACTCTGGGAGCTTGTAAATCTGGCTaGTCTGGTGAGGAGAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: LLAPCIASDQRSQYRTLGACKSG*SGEEKC Trigger: GCATTTCTCCTCACCAGATCAGCCAGATTTACAAGC...TCCCAGAGTCCTGTATTGGCTCCTCTGATCACTGGCTATACATGGAGCCAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR CCA 90 bp | CACTCAGCTGTGGTATTGCAGGTGAACCAAATTAGAAATCTGGAGCCTGTCTTACCAGCACCCAGTTCCTaGCCAATGCCGGACAGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: HSAVVLQVNQIRNLEPVLPAPSS*PMPDRL Trigger: TAGCCTGTCCGGCATTGGCCAGGAACTGGGTGCTGG...TAAGACAGGCTCCAGATTTCTAATTTGGTTCACCTGCAATACCACAGCTGAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| CDS-3UTR CCA 90 bp | TCATCTGCGTCTCCTCACCCTCAAGTCACTGTGTCCCCAGATGTTTTGGGTTTACCTGGCAGACATAAATaGTTAGCCTTGGCCGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SSASPHPQVTVSPDVLGLPGRHK*LALAAP Trigger: TGGTGCGGCCAAGGCTAACCATTTATGTCTGCCAGG...TAAACCCAAAACATCTGGGGACACAGTGACTTGAGGGTGAGGAGACGCAGATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| CDS-3UTR GCA 90 bp | AATCTCCAGTCATGTCCCCTTCAGAAGGTGAAGAGGGGAAGGCAGCAGCAGCCGCTTAAAAATGGGCAATaGGAGGACATCACTCATACT | + |
|
Preference number: 4 (lower is better) Translates to: NLQSCPLQKVKRGRQQQPLKNGQ*EDITHT Trigger: AGTATGAGTGATGTCCTCGCATTGCCCATTTTTAAG...CGGCTGCTGCTGCCTTCCCCTCTTCACCTTCTGAAGGGGACATGACTGGAGATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| CDS-3UTR CCA 90 bp | GCTGAGGTTAGTGTGACATTGGGTGTCTGTCTGTCTGGGGCTTCATTATCGCTATTGAAGACTTTGATCTaGCAGCTGGCCGAGTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: AEVSVTLGVCLSGASLSLLKTLI*QLAECK Trigger: CTTGCACTCGGCCAGCTGCCAGATCAAAGTCTTCAA...TAGCGATAATGAAGCCCCAGACAGACAGACACCCAATGTCACACTAACCTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| CDS-3UTR TCA 90 bp | CATCTGCGTCTCCTCACCCTCAAGTCACTGTGTCCCCAGATGTTTTGGGTTTATGCACAGAGCACATACTaGAAAGGCAGAATCTCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HLRLLTLKSLCPQMFWVYAQSTY*KGRISF Trigger: GAACGAGATTCTGCCTTTTCAGTATGTGCTCTGTGC...ATAAACCCAAAACATCTGGGGACACAGTGACTTGAGGGTGAGGAGACGCAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| CDS-3UTR CCA 90 bp | TCATCTGCGTCTCCTCACCCTCAAGTCACTGTGTCCCCAGATGTTTTGGGTTTACTTGCCGTTGAGTTCTaGAAGCTCTCCCAGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSASPHPQVTVSPDVLGLLAVEF*KLSQFS Trigger: AGAAAACTGGGAGAGCTTCCAGAACTCAACGGCAAG...TAAACCCAAAACATCTGGGGACACAGTGACTTGAGGGTGAGGAGACGCAGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| CDS-3UTR CCA 90 bp | GCTGAGGTTAGTGTGACATTGGGTGTCTGTCTGTCTGGGGCTTCATTATCGCTACTTGCCGTTGAGTTCTaGAAGCTCTCCCAGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AEVSVTLGVCLSGASLSLLAVEF*KLSQFS Trigger: AGAAAACTGGGAGAGCTTCCAGAACTCAACGGCAAG...TAGCGATAATGAAGCCCCAGACAGACAGACACCCAATGTCACACTAACCTCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR CCA 90 bp | CCTCCTCACAGTTGTGAACAGAGCAGAGCAGAGCTGCCAACAGGCTTGAGGCAATATTTCTCTTTTTCATaGGGCGTCCGTTTCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: PPHSCEQSRAELPTGLRQYFSFS*GVRFSI Trigger: AATGGAGAAACGGACGCCCCATGAAAAAGAGAAATA...TTGCCTCAAGCCTGTTGGCAGCTCTGCTCTGCTCTGTTCACAACTGTGAGGAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR TCA 90 bp | TCCCAGCACTTGGAAGGTGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACAGAGATCGGGAGGCAAACTTaGCTCTTCTTGCTTAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SQHLEGGFLSLRPAWSTEIGRQT*LFLLKN Trigger: ATTTTTAAGCAAGAAGAGTCAAGTTTGCCTCCCGAT...CTCTGTAGACCAGGCTGGCCTCAAACTCAGAAATCCACCTTCCAAGTGCTGGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR GCA 90 bp | TGTGAAAAAGGAGGGCCTAAGTGCTTTACAATTCTGTACATGCACACAGACACATTGAAGGTATCGATCTaGACTCGGAACGGCACCCCC | + |
|
Preference number: 4 (lower is better) Translates to: CEKGGPKCFTILYMHTDTLKVSI*TRNGTP Trigger: GGGGGTGCCGTTCCGAGTGCAGATCGATACCTTCAA...TGTGTCTGTGTGCATGTACAGAATTGTAAAGCACTTAGGCCCTCCTTTTTCACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| CDS-3UTR GCA 90 bp | CTGCTGGCTCCATGTATAGCCAGTGATCAGAGGAGCCAATACAGGACTCTGGGATTTTTGTTTTCTGTCTaGACCCTTAGGCTTGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LLAPCIASDQRSQYRTLGFLFSV*TLRLED Trigger: GTCTTCAAGCCTAAGGGTGCAGACAGAAAACAAAAA...TCCCAGAGTCCTGTATTGGCTCCTCTGATCACTGGCTATACATGGAGCCAGCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| CDS-3UTR CCA 90 bp | CTGCTGGCTCCATGTATAGCCAGTGATCAGAGGAGCCAATACAGGACTCTGGGATATTTCTCTTTTTCATaGGGCGTCCGTTTCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: LLAPCIASDQRSQYRTLGYFSFS*GVRFSI Trigger: AATGGAGAAACGGACGCCCCATGAAAAAGAGAAATA...TCCCAGAGTCCTGTATTGGCTCCTCTGATCACTGGCTATACATGGAGCCAGCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| CDS-3UTR CCA 90 bp | GCTTCTTACTGGTATCAACAGGGGCCAGAAAGTAAGGAAACTGCTGGCTCCATGAAGCAGGCTTCTTCCTaGAAGTTCTGTACCATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ASYWYQQGPESKETAGSMKQASS*KFCTIS Trigger: TGAGATGGTACAGAACTTCCAGGAAGAAGCCTGCTT...CATGGAGCCAGCAGTTTCCTTACTTTCTGGCCCCTGTTGATACCAGTAAGAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR GCA 90 bp | CTGCTGGCTCCATGTATAGCCAGTGATCAGAGGAGCCAATACAGGACTCTGGGAAAACTTGACTCTTCTTaGTTAAAAATGGGCAATGCG | + |
|
Preference number: 4 (lower is better) Translates to: LLAPCIASDQRSQYRTLGKLDSS*LKMGNA Trigger: CGCATTGCCCATTTTTAAGCAAGAAGAGTCAAGTTT...TCCCAGAGTCCTGTATTGGCTCCTCTGATCACTGGCTATACATGGAGCCAGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| CDS-3UTR CCA 90 bp | CACTCAGCTGTGGTATTGCAGGTGAACCAAATTAGAAATCTGGAGCCTGTCTTAAGAGAGAAACTGCTATaGGAGCTGTTGAAGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HSAVVLQVNQIRNLEPVLREKLL*ELLKPG Trigger: CCCTGGCTTCAACAGCTCCCATAGCAGTTTCTCTCT...TAAGACAGGCTCCAGATTTCTAATTTGGTTCACCTGCAATACCACAGCTGAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| CDS-3UTR TCA 90 bp | CACTCAGCTGTGGTATTGCAGGTGAACCAAATTAGAAATCTGGAGCCTGTCTTAGAAGAAAGTACCGTTTaGATCCCCATCCTCCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HSAVVLQVNQIRNLEPVLEESTV*IPILLL Trigger: AAGCAGGAGGATGGGGATTCAAACGGTACTTTCTTC...TAAGACAGGCTCCAGATTTCTAATTTGGTTCACCTGCAATACCACAGCTGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| CDS-3UTR TCA 90 bp | TGTGAAAAAGGAGGGCCTAAGTGCTTTACAATTCTGTACATGCACACAGACACAGCACAGAGCACATACTaGAAAGGCAGAATCTCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CEKGGPKCFTILYMHTDTAQSTY*KGRISF Trigger: GAACGAGATTCTGCCTTTTCAGTATGTGCTCTGTGC...TGTGTCTGTGTGCATGTACAGAATTGTAAAGCACTTAGGCCCTCCTTTTTCACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| CDS-3UTR GCA 90 bp | GCTTCTTACTGGTATCAACAGGGGCCAGAAAGTAAGGAAACTGCTGGCTCCATGAAACTTGACTCTTCTTaGTTAAAAATGGGCAATGCG | + |
|
Preference number: 4 (lower is better) Translates to: ASYWYQQGPESKETAGSMKLDSS*LKMGNA Trigger: CGCATTGCCCATTTTTAAGCAAGAAGAGTCAAGTTT...CATGGAGCCAGCAGTTTCCTTACTTTCTGGCCCCTGTTGATACCAGTAAGAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| CDS-3UTR TCA 90 bp | GGGTTTATTAAGGGGATAAAAGAAGATTATCCGTCCGTGGGATTTATCATTCGGCTGATGCAGTGCACCTaGATAAACACAGATGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GFIKGIKEDYPSVGFIIRLMQCT*INTDVL Trigger: GAGGACATCTGTGTTTATTCAGGTGCACTGCATCAG...CCGAATGATAAATCCCACGGACGGATAATCTTCTTTTATCCCCTTAATAAACCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| CDS-3UTR CCA 90 bp | TGTGAAAAAGGAGGGCCTAAGTGCTTTACAATTCTGTACATGCACACAGACACACATGATAGCTGTCACTaGTTTCTGCTTCCATCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: CEKGGPKCFTILYMHTDTHDSCH*FLLPSC Trigger: ACACGATGGAAGCAGAAACCAGTGACAGCTATCATG...TGTGTCTGTGTGCATGTACAGAATTGTAAAGCACTTAGGCCCTCCTTTTTCACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| CDS-3UTR GCA 90 bp | CACTCAGCTGTGGTATTGCAGGTGAACCAAATTAGAAATCTGGAGCCTGTCTTACTTAAAAATGGGCAATaGGAGGACATCACTCATACT | + |
|
Preference number: 4 (lower is better) Translates to: HSAVVLQVNQIRNLEPVLLKNGQ*EDITHT Trigger: AGTATGAGTGATGTCCTCGCATTGCCCATTTTTAAG...TAAGACAGGCTCCAGATTTCTAATTTGGTTCACCTGCAATACCACAGCTGAGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| CDS-3UTR GCA 90 bp | TGTGAAAAAGGAGGGCCTAAGTGCTTTACAATTCTGTACATGCACACAGACACATTTTTGTTTTCTGTCTaGACCCTTAGGCTTGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: CEKGGPKCFTILYMHTDTFLFSV*TLRLED Trigger: GTCTTCAAGCCTAAGGGTGCAGACAGAAAACAAAAA...TGTGTCTGTGTGCATGTACAGAATTGTAAAGCACTTAGGCCCTCCTTTTTCACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| CDS-3UTR CCA 90 bp | TGTGAAAAAGGAGGGCCTAAGTGCTTTACAATTCTGTACATGCACACAGACACATACACCCACAGACATTaGGATATCTATGTCGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: CEKGGPKCFTILYMHTDTYTHRH*DIYVEN Trigger: ATTCTCGACATAGATATCCCAATGTCTGTGGGTGTA...TGTGTCTGTGTGCATGTACAGAATTGTAAAGCACTTAGGCCCTCCTTTTTCACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| CDS-3UTR CCA 90 bp | GGGTTTATTAAGGGGATAAAAGAAGATTATCCGTCCGTGGGATTTATCATTCGGTACACCCACAGACATTaGGATATCTATGTCGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GFIKGIKEDYPSVGFIIRYTHRH*DIYVEN Trigger: ATTCTCGACATAGATATCCCAATGTCTGTGGGTGTA...CCGAATGATAAATCCCACGGACGGATAATCTTCTTTTATCCCCTTAATAAACCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| CDS CCA 90 bp | CTGAGGCGTGGTTGTCGGCAAGAGGTTATCCGTGACTGGAGGGGGTaGTTCTGGCTGGTGGTTGGGCGAGCCGTTTCCTTCCCCAAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LRRGCRQEVIRDWRG*FWLVVGRAVSFPKR Trigger: TCTCTTGGGGAAGGAAACGGCTCGCCCAACCACCAGCCAGAACCACCCCCTCCAGTCACGGATAACCTCTTGCCGACAACCACGCCTCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000009877.8 ENSMUST00000229581.2 ENSMUST00000229696.2 |
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| CDS GCA 90 bp | ATAGCATGGTACACGAAGAAAGTACCGTTTGAATCCCCATCCTCCTaGTTCTGCGGCTGCGGCTGCGGCTGCGGCTGCTGCTCCCTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: IAWYTKKVPFESPSS*FCGCGCGCGCCSLN Trigger: GTTGAGGGAGCAGCAGCCGCAGCCGCAGCCGCAGCCGCAGAAGCAGGAGGATGGGGATTCAAACGGTACTTTCTTCGTGTACCATGCTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009877.8 ENSMUST00000229581.2 ENSMUST00000229696.2 |
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| CDS CCA 90 bp | CGTGGTTGTCGGCAAGAGGTTATCCGTGACTGGAGGGGGTGGTTCTaGCTGGTGGTTGGGCGAGCCGTTTCCTTCCCCAAGAGAGAAACT | + |
|
Preference number: 5 (lower is better) Translates to: RGCRQEVIRDWRGWF*LVVGRAVSFPKRET Trigger: AGTTTCTCTCTTGGGGAAGGAAACGGCTCGCCCAACCACCAGCCAGAACCACCCCCTCCAGTCACGGATAACCTCTTGCCGACAACCACG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000009877.8 ENSMUST00000229581.2 ENSMUST00000229696.2 |
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| CDS TCA 90 bp | CAGCTCCTCGAGATAGATAGCATGGTACACGAAGAAAGTACCGTTTaGATCCCCATCCTCCTGCTTCTGCGGCTGCGGCTGCGGCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: QLLEIDSMVHEESTV*IPILLLLRLRLRLR Trigger: CCGCAGCCGCAGCCGCAGCCGCAGAAGCAGGAGGATGGGGATTCAAACGGTACTTTCTTCGTGTACCATGCTATCTATCTCGAGGAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009877.8 ENSMUST00000229581.2 ENSMUST00000229696.2 |
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| CDS GCA 90 bp | TGCTCTGTGTACTCTCCGTTCCCGTTCTCCTTGAAGGTATCGATCTaGACTCGGAACGGCACCCCCTTCTCCCCGCCATGCTTCCTCATG | + |
|
Preference number: 5 (lower is better) Translates to: CSVYSPFPFSLKVSI*TRNGTPFSPPCFLM Trigger: CATGAGGAAGCATGGCGGGGAGAAGGGGGTGCCGTTCCGAGTGCAGATCGATACCTTCAAGGAGAACGGGAACGGAGAGTACACAGAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000009877.8 ENSMUST00000229581.2 ENSMUST00000229696.2 |
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| CDS CCA 90 bp | GTTGTCGGCAAGAGGTTATCCGTGACTGGAGGGGGTGGTTCTGGCTaGTGGTTGGGCGAGCCGTTTCCTTCCCCAAGAGAGAAACTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: VVGKRLSVTGGGGSG*WLGEPFPSPREKLL Trigger: TAGCAGTTTCTCTCTTGGGGAAGGAAACGGCTCGCCCAACCACCAGCCAGAACCACCCCCTCCAGTCACGGATAACCTCTTGCCGACAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000009877.8 ENSMUST00000229581.2 ENSMUST00000229696.2 |
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| CDS-3UTR CAA 90 bp | GAAGTCCGTCAGTTTCCAGCAGAGCCCCAGAAAGACCCAGTGGTGAGCACTGGCTGCAGGGCCGCAGATTaGGATCACGTCGTCTCTAGT | + |
|
Preference number: 5 (lower is better) Translates to: EVRQFPAEPQKDPVVSTGCRAAD*DHVVSS Trigger: ACTAGAGACGACGTGATCCAAATCTGCGGCCCTGCA...GCCAGTGCTCACCACTGGGTCTTTCTGGGGCTCTGCTGGAAACTGACGGACTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| CDS-3UTR CAA 90 bp | GGAGCCAATACAGGACTCTGGGATTCCTCCTTGGGACCTGCTCGCCCTGCACTGACACAGATGTCCTCTTaGAAGGGTCCCACAGGAACT | + |
|
Preference number: 5 (lower is better) Translates to: GANTGLWDSSLGPARPALTQMSS*KGPTGT Trigger: AGTTCCTGTGGGACCCTTCAAAGAGGACATCTGTGT...CAGTGCAGGGCGAGCAGGTCCCAAGGAGGAATCCCAGAGTCCTGTATTGGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| CDS-3UTR CAA 90 bp | GGAGCCAATACAGGACTCTGGGATTCCTCCTTGGGACCTGCTCGCCCTGCACTGTTTAGCTGGGTAGGATaGGCCCTGGGATCAATTACA | + |
|
Preference number: 5 (lower is better) Translates to: GANTGLWDSSLGPARPALFSWVG*ALGSIT Trigger: TGTAATTGATCCCAGGGCCAATCCTACCCAGCTAAA...CAGTGCAGGGCGAGCAGGTCCCAAGGAGGAATCCCAGAGTCCTGTATTGGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| CDS-3UTR CAA 90 bp | ACAGGACTCTGGGATTCCTCCTTGGGACCTGCTCGCCCTGCACTGGACACGCCTTTACACCCACAGACATaGGGATATCTATGTCGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: TGLWDSSLGPARPALDTPLHPQT*GYLCRE Trigger: TTCTCGACATAGATATCCCAATGTCTGTGGGTGTAA...AGGCGTGTCCAGTGCAGGGCGAGCAGGTCCCAAGGAGGAATCCCAGAGTCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| CDS-3UTR CAA 90 bp | AATCTCCAGTCATGTCCCCTTCAGAAGGTGAAGAGGGGAAGGCAGCAGCAGCCGACACAGATGTCCTCTTaGAAGGGTCCCACAGGAACT | + |
|
Preference number: 5 (lower is better) Translates to: NLQSCPLQKVKRGRQQQPTQMSS*KGPTGT Trigger: AGTTCCTGTGGGACCCTTCAAAGAGGACATCTGTGT...CGGCTGCTGCTGCCTTCCCCTCTTCACCTTCTGAAGGGGACATGACTGGAGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| CDS CCA 90 bp | TTCCCCAAGAGAGAAACTGCTATGGGAGCTGTTGAAGCCAGGGGATaGGGAATTGTTGACGTAGGTGATCTCAGGCCACGGAGAACACTC | + |
|
Preference number: 5 (lower is better) Translates to: FPKRETAMGAVEARG*GIVDVGDLRPRRTL Trigger: GAGTGTTCTCCGTGGCCTGAGATCACCTACGTCAACAATTCCCCATCCCCTGGCTTCAACAGCTCCCATAGCAGTTTCTCTCTTGGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000009877.8 ENSMUST00000229581.2 ENSMUST00000229696.2 |
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| CDS CCA 90 bp | GTTAAGGGTGCCTGCTGTTCTCCCAGAGGACCAGAGTTCAGTTCCTaGCAGTATCAGGCAGCTCAAAACTACCTCATCGCTGATGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: VKGACCSPRGPEFSS*QYQAAQNYLIADDH Trigger: GTGGTCATCAGCGATGAGGTAGTTTTGAGCTGCCTGATACTGCCAGGAACTGAACTCTGGTCCTCTGGGAGAACAGCAGGCACCCTTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229581.2 |
||
| CDS CCA 90 bp | AGAGATGGACTGGTGGCTGTCCTGCTGCTGAGTAATCCAAAGAGATaGACTGGTGGCTGTCCTGCTGCTGAATGGTTCAGACTGCAATGT | + |
|
Preference number: 5 (lower is better) Translates to: RDGLVAVLLLSNPKR*TGGCPAAEWFRLQC Trigger: ACATTGCAGTCTGAACCATTCAGCAGCAGGACAGCCACCAGTCCATCTCTTTGGATTACTCAGCAGCAGGACAGCCACCAGTCCATCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231174.2 |
||
| CDS-3UTR CAA 90 bp | CCTCCTCACAGTTGTGAACAGAGCAGAGCAGAGCTGCCAACAGGCTTGAGGCAATTTAGCTGGGTAGGATaGGCCCTGGGATCAATTACA | + |
|
Preference number: 5 (lower is better) Translates to: PPHSCEQSRAELPTGLRQFSWVG*ALGSIT Trigger: TGTAATTGATCCCAGGGCCAATCCTACCCAGCTAAA...TTGCCTCAAGCCTGTTGGCAGCTCTGCTCTGCTCTGTTCACAACTGTGAGGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR CAA 90 bp | GCTTCTTACTGGTATCAACAGGGGCCAGAAAGTAAGGAAACTGCTGGCTCCATGTGCAGGGCCGCAGATTaGGATCACGTCGTCTCTAGT | + |
|
Preference number: 5 (lower is better) Translates to: ASYWYQQGPESKETAGSMCRAAD*DHVVSS Trigger: ACTAGAGACGACGTGATCCAAATCTGCGGCCCTGCA...CATGGAGCCAGCAGTTTCCTTACTTTCTGGCCCCTGTTGATACCAGTAAGAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR CAA 90 bp | GCTTCTTACTGGTATCAACAGGGGCCAGAAAGTAAGGAAACTGCTGGCTCCATGCATAAATGGTTAGCCTaGGCCGCACCATCCGGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: ASYWYQQGPESKETAGSMHKWLA*AAPSGL Trigger: AAGGCCGGATGGTGCGGCCAAGGCTAACCATTTATG...CATGGAGCCAGCAGTTTCCTTACTTTCTGGCCCCTGTTGATACCAGTAAGAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR CAA 90 bp | TCATCTGCGTCTCCTCACCCTCAAGTCACTGTGTCCCCAGATGTTTTGGGTTTACATAAATGGTTAGCCTaGGCCGCACCATCCGGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SSASPHPQVTVSPDVLGLHKWLA*AAPSGL Trigger: AAGGCCGGATGGTGCGGCCAAGGCTAACCATTTATG...TAAACCCAAAACATCTGGGGACACAGTGACTTGAGGGTGAGGAGACGCAGATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR CAA 90 bp | TCCCAGCACTTGGAAGGTGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACAGAGCGAAGAAAGTACCGTTaGAATCCCCATCCTCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SQHLEGGFLSLRPAWSTERRKYR*NPHPPA Trigger: AGCAGGAGGATGGGGATTCAAACGGTACTTTCTTCG...CTCTGTAGACCAGGCTGGCCTCAAACTCAGAAATCCACCTTCCAAGTGCTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
||
| CDS-3UTR CAA 90 bp | CCTCCTCACAGTTGTGAACAGAGCAGAGCAGAGCTGCCAACAGGCTTGAGGCAATTCATAAGACTGTCCTaGATTGAGGTACGTCAGGGT | + |
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Preference number: 5 (lower is better) Translates to: PPHSCEQSRAELPTGLRQFIRLS*IEVRQG Trigger: ACCCTGACGTACCTCAATCAAGGACAGTCTTATGAA...TTGCCTCAAGCCTGTTGGCAGCTCTGCTCTGCTCTGTTCACAACTGTGAGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| CDS-3UTR CAA 90 bp | AATCTCCAGTCATGTCCCCTTCAGAAGGTGAAGAGGGGAAGGCAGCAGCAGCCGAGTAAATCTGAGAAGTaGGTGAAAAGCCTCGTGAAT | + |
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Preference number: 5 (lower is better) Translates to: NLQSCPLQKVKRGRQQQPSKSEK*VKSLVN Trigger: ATTCACGAGGCTTTTCACCAACTTCTCAGATTTACT...CGGCTGCTGCTGCCTTCCCCTCTTCACCTTCTGAAGGGGACATGACTGGAGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000009877.8 |
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| CDS-3UTR CAA 90 bp | CTATATTCCCAGCACTTGGAAGGTGGATTTCTGAGTTTGAGGCCAGCCTGGTCTCGAAGAAAGTACCGTTaGAATCCCCATCCTCCTGCT | + |
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Preference number: 5 (lower is better) Translates to: LYSQHLEGGFLSLRPAWSRRKYR*NPHPPA Trigger: AGCAGGAGGATGGGGATTCAAACGGTACTTTCTTCG...AGACCAGGCTGGCCTCAAACTCAGAAATCCACCTTCCAAGTGCTGGGAATATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| CDS TCA 90 bp | TGTCGTGGAACACTACGCGGAATATGCTCTTCACCAGCTTGCCGTTaGGTTCTGGAAGCTCTCCCAGTTTTCTATTGTCTAGCATTCGGA | + |
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Preference number: 5 (lower is better) Translates to: CRGTLRGICSSPACR*VLEALPVFYCLAFG Trigger: TCCGAATGCTAGACAATAGAAAACTGGGAGAGCTTCCAGAACTCAACGGCAAGCTGGTGAAGAGCATATTCCGCGTAGTGTTCCACGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009877.8 ENSMUST00000229581.2 ENSMUST00000229696.2 |
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| CDS-3UTR CAA 90 bp | TCATCTGCGTCTCCTCACCCTCAAGTCACTGTGTCCCCAGATGTTTTGGGTTTATTCATAAGACTGTCCTaGATTGAGGTACGTCAGGGT | + |
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Preference number: 5 (lower is better) Translates to: SSASPHPQVTVSPDVLGLFIRLS*IEVRQG Trigger: ACCCTGACGTACCTCAATCAAGGACAGTCTTATGAA...TAAACCCAAAACATCTGGGGACACAGTGACTTGAGGGTGAGGAGACGCAGATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| CDS-3UTR CAA 90 bp | TCATCTGCGTCTCCTCACCCTCAAGTCACTGTGTCCCCAGATGTTTTGGGTTTATCTCCCAGTTTTCTATaGTCTAGCATTCGGATTTCA | + |
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Preference number: 5 (lower is better) Translates to: SSASPHPQVTVSPDVLGLSPSFL*SSIRIS Trigger: TGAAATCCGAATGCTAGACAATAGAAAACTGGGAGA...TAAACCCAAAACATCTGGGGACACAGTGACTTGAGGGTGAGGAGACGCAGATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| CDS CCA 90 bp | TTTAATGCATTAAAGAGTCTGATTCCATCTGCAGGGCCGCAGATTTaGATCACGTCGTCTCTAGTTAGTTTCAGTAAATCTGCCCCTGAG | + |
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Preference number: 5 (lower is better) Translates to: FNALKSLIPSAGPQI*ITSSLVSFSKSAPE Trigger: CTCAGGGGCAGATTTACTGAAACTAACTAGAGACGACGTGATCCAAATCTGCGGCCCTGCAGATGGAATCAGACTCTTTAATGCATTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229581.2 ENSMUST00000229696.2 |
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| CDS CCA 90 bp | TTTAATGCATTAAAGAGTCTGATTCCATCTGCAGGGCCGCAGATTTaGATCACGTCGTCTCTAGTTAGTTTCAGTAAATCTGAGAAGTTG | + |
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Preference number: 5 (lower is better) Translates to: FNALKSLIPSAGPQI*ITSSLVSFSKSEKL Trigger: CAACTTCTCAGATTTACTGAAACTAACTAGAGACGACGTGATCCAAATCTGCGGCCCTGCAGATGGAATCAGACTCTTTAATGCATTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009877.8 |
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| CDS-3UTR CAA 90 bp | TGTGAAAAAGGAGGGCCTAAGTGCTTTACAATTCTGTACATGCACACAGACACATCTCCCAGTTTTCTATaGTCTAGCATTCGGATTTCA | + |
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Preference number: 5 (lower is better) Translates to: CEKGGPKCFTILYMHTDTSPSFL*SSIRIS Trigger: TGAAATCCGAATGCTAGACAATAGAAAACTGGGAGA...TGTGTCTGTGTGCATGTACAGAATTGTAAAGCACTTAGGCCCTCCTTTTTCACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 |
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| CDS CCA 72 bp | CTGAGGCGTGGTTGTCGGCAAGAGGTTATCCGTGACTaGAGGGGGTGGTTCTGGCTGGTGGTTGGGCGAGCC | + |
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Preference number: 6 (lower is better) Translates to: LRRGCRQEVIRD*RGWFWLVVGRA Trigger: GGCTCGCCCAACCACCAGCCAGAACCACCCCCTCCAGTCACGGATAACCTCTTGCCGACAACCACGCCTCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000009877.8 ENSMUST00000229581.2 ENSMUST00000229696.2 |
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| CDS TCA 72 bp | CTTCCTGAGGCGTGGTTGTCGGCAAGAGGTTATCCGTaGCTGGAGGGGGTGGTTCTGGCTGGTGGTTGGGCG | + |
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Preference number: 6 (lower is better) Translates to: LPEAWLSARGYP*LEGVVLAGGWA Trigger: CGCCCAACCACCAGCCAGAACCACCCCCTCCAGTCACGGATAACCTCTTGCCGACAACCACGCCTCAGGAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000009877.8 ENSMUST00000229581.2 ENSMUST00000229696.2 |
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| CDS GCA 72 bp | TACACGAAGAAAGTACCGTTTGAATCCCCATCCTCCTaGTTCTGCGGCTGCGGCTGCGGCTGCGGCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: YTKKVPFESPSS*FCGCGCGCGCC Trigger: GCAGCAGCCGCAGCCGCAGCCGCAGCCGCAGAAGCAGGAGGATGGGGATTCAAACGGTACTTTCTTCGTGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009877.8 ENSMUST00000229581.2 ENSMUST00000229696.2 |
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| CDS CCA 72 bp | GGTTGTCGGCAAGAGGTTATCCGTGACTGGAGGGGGTaGTTCTGGCTGGTGGTTGGGCGAGCCGTTTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: GCRQEVIRDWRG*FWLVVGRAVSF Trigger: GAAGGAAACGGCTCGCCCAACCACCAGCCAGAACCACCCCCTCCAGTCACGGATAACCTCTTGCCGACAACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000009877.8 ENSMUST00000229581.2 ENSMUST00000229696.2 |
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| CDS GCA 72 bp | TACTCTCCGTTCCCGTTCTCCTTGAAGGTATCGATCTaGACTCGGAACGGCACCCCCTTCTCCCCGCCATGC | + |
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Preference number: 6 (lower is better) Translates to: YSPFPFSLKVSI*TRNGTPFSPPC Trigger: GCATGGCGGGGAGAAGGGGGTGCCGTTCCGAGTGCAGATCGATACCTTCAAGGAGAACGGGAACGGAGAGTA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000009877.8 ENSMUST00000229265.2 ENSMUST00000229581.2 ENSMUST00000229696.2 |
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| CDS CAA 72 bp | CCTCGTGAATGTGGAGAACCGGTTTCGATGCAGCCATaGCTGGGCTTCCTGAGGCGTGGTTGTCGGCAAGAG | + |
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Preference number: 6 (lower is better) Translates to: PRECGEPVSMQP*LGFLRRGCRQE Trigger: CTCTTGCCGACAACCACGCCTCAGGAAGCCCAGCAATGGCTGCATCGAAACCGGTTCTCCACATTCACGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009877.8 ENSMUST00000229581.2 ENSMUST00000229696.2 |
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| CDS TCA 72 bp | GCAAGTGCTCTGTGTACTCTCCGTTCCCGTTCTCCTTaGAGGTATCGATCTGCACTCGGAACGGCACCCCCT | + |
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Preference number: 6 (lower is better) Translates to: ASALCTLRSRSP*RYRSALGTAPP Trigger: AGGGGGTGCCGTTCCGAGTGCAGATCGATACCTTCAAGGAGAACGGGAACGGAGAGTACACAGAGCACTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000009877.8 ENSMUST00000229265.2 ENSMUST00000229581.2 ENSMUST00000229696.2 |
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| CDS TCA 72 bp | GAGAACCGGTTTCGATGCAGCCATTGCTGGGCTTCCTaGGGCGTGGTTGTCGGCAAGAGGTTATCCGTGACT | + |
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Preference number: 6 (lower is better) Translates to: ENRFRCSHCWAS*GVVVGKRLSVT Trigger: AGTCACGGATAACCTCTTGCCGACAACCACGCCTCAGGAAGCCCAGCAATGGCTGCATCGAAACCGGTTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009877.8 ENSMUST00000229581.2 ENSMUST00000229696.2 |
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| CDS CAA 90 bp | GGTGAAAAGCCTCGTGAATGTGGAGAACCGGTTTCGATGCAGCCATaGCTGGGCTTCCTGAGGCGTGGTTGTCGGCAAGAGGTTATCCGT | + |
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Preference number: 6 (lower is better) Translates to: GEKPRECGEPVSMQP*LGFLRRGCRQEVIR Trigger: ACGGATAACCTCTTGCCGACAACCACGCCTCAGGAAGCCCAGCAATGGCTGCATCGAAACCGGTTCTCCACATTCACGAGGCTTTTCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009877.8 ENSMUST00000229581.2 ENSMUST00000229696.2 |
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| CDS CCA 72 bp | AGAGAAACTGCTATGGGAGCTGTTGAAGCCAGGGGATaGGGAATTGTTGACGTAGGTGATCTCAGGCCACGG | + |
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Preference number: 6 (lower is better) Translates to: RETAMGAVEARG*GIVDVGDLRPR Trigger: CCGTGGCCTGAGATCACCTACGTCAACAATTCCCCATCCCCTGGCTTCAACAGCTCCCATAGCAGTTTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009877.8 ENSMUST00000229581.2 ENSMUST00000229696.2 |
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| CDS CCA 72 bp | CTGGTGGCTGTCCTGCTGCTGAGTAATCCAAAGAGATaGACTGGTGGCTGTCCTGCTGCTGAATGGTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: LVAVLLLSNPKR*TGGCPAAEWFR Trigger: TCTGAACCATTCAGCAGCAGGACAGCCACCAGTCCATCTCTTTGGATTACTCAGCAGCAGGACAGCCACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231174.2 |
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| CDS TCA 72 bp | GAGATAGATAGCATGGTACACGAAGAAAGTACCGTTTaGATCCCCATCCTCCTGCTTCTGCGGCTGCGGCTG | + |
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Preference number: 6 (lower is better) Translates to: EIDSMVHEESTV*IPILLLLRLRL Trigger: CAGCCGCAGCCGCAGAAGCAGGAGGATGGGGATTCAAACGGTACTTTCTTCGTGTACCATGCTATCTATCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009877.8 ENSMUST00000229581.2 ENSMUST00000229696.2 |
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| CDS CAA 90 bp | AGTCGCCTGTCGTGGAACACTACGCGGAATATGCTCTTCACCAGCTaGCCGTTGAGTTCTGGAAGCTCTCCCAGTTTTCTATTGTCTAGC | + |
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Preference number: 6 (lower is better) Translates to: SRLSWNTTRNMLFTS*PLSSGSSPSFLLSS Trigger: GCTAGACAATAGAAAACTGGGAGAGCTTCCAGAACTCAACGGCAAGCTGGTGAAGAGCATATTCCGCGTAGTGTTCCACGACAGGCGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009877.8 ENSMUST00000229581.2 ENSMUST00000229696.2 |
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| CDS CCA 72 bp | TTTCTGTCTGCACCCTTAGGCTTGAAGACTTTGATCTaGCAGCTGGCCGAGTGCAAGTGCTCTGTGTACTCT | + |
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Preference number: 6 (lower is better) Translates to: FLSAPLGLKTLI*QLAECKCSVYS Trigger: AGAGTACACAGAGCACTTGCACTCGGCCAGCTGCCAGATCAAAGTCTTCAAGCCTAAGGGTGCAGACAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009877.8 ENSMUST00000229581.2 ENSMUST00000229696.2 |
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| CDS CAA 90 bp | CTGTCGTGGAACACTACGCGGAATATGCTCTTCACCAGCTTGCCGTaGAGTTCTGGAAGCTCTCCCAGTTTTCTATTGTCTAGCATTCGG | + |
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Preference number: 6 (lower is better) Translates to: LSWNTTRNMLFTSLP*SSGSSPSFLLSSIR Trigger: CCGAATGCTAGACAATAGAAAACTGGGAGAGCTTCCAGAACTCAACGGCAAGCTGGTGAAGAGCATATTCCGCGTAGTGTTCCACGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009877.8 ENSMUST00000229581.2 ENSMUST00000229696.2 |
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| CDS CAA 90 bp | CTGTACCATCTCATCGCTGATGACCACATGGATCCCTGTCGGCCCTaGCTTGTAAATCTGGCTGATCTGGTGAGGAGAAATGCTGAAAAG | + |
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Preference number: 6 (lower is better) Translates to: LYHLIADDHMDPCRP*LVNLADLVRRNAEK Trigger: CTTTTCAGCATTTCTCCTCACCAGATCAGCCAGATTTACAAGCAAGGGCCGACAGGGATCCATGTGGTCATCAGCGATGAGATGGTACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009877.8 ENSMUST00000229696.2 ENSMUST00000231174.2 |
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| CDS CAA 90 bp | CAAAACTACCTCATCGCTGATGACCACATGGATCCCTGTCGGCCCTaGCTTGTAAATCTGGCTGATCTGGTGAGGAGAAATGCTGAAAAG | + |
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Preference number: 6 (lower is better) Translates to: QNYLIADDHMDPCRP*LVNLADLVRRNAEK Trigger: CTTTTCAGCATTTCTCCTCACCAGATCAGCCAGATTTACAAGCAAGGGCCGACAGGGATCCATGTGGTCATCAGCGATGAGGTAGTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229581.2 |
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| CDS CCA 72 bp | TTAAAGAGTCTGATTCCATCTGCAGGGCCGCAGATTTaGATCACGTCGTCTCTAGTTAGTTTCAGTAAATCT | + |
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Preference number: 6 (lower is better) Translates to: LKSLIPSAGPQI*ITSSLVSFSKS Trigger: AGATTTACTGAAACTAACTAGAGACGACGTGATCCAAATCTGCGGCCCTGCAGATGGAATCAGACTCTTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009877.8 ENSMUST00000229581.2 ENSMUST00000229696.2 |
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