Pregenerated sensors for TFAP4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005718Ensembl transcript IDs: ENSMUST00000005862.9, ENSMUST00000229956.2, ENSMUST00000230875.2
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCCAGGGCCGAGGTCCAGCCCTGGAGTCCCGATGCTCCCACGCGTaGTATATACCACCACAACCCCGGGACCTGGGCTCCGGTGGCTTC | + |
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Preference number: 1 (lower is better) Translates to: PQGRGPALESRCSHA*YIPPQPRDLGSGGF Trigger: GAAGCCACCGGAGCCCAGGTCCCGGGGTTGTGGTGGTATATAGCACGCGTGGGAGCATCGGGACTCCAGGGCTGGACCTCGGCCCTGGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| 3UTR GCA 90 bp | CAGCTTCCCTGGCCCCAGGGCCGAGGTCCAGCCCTGGAGTCCCGATaGTCCCACGCGTGCTATATACCACCACAACCCCGGGACCTGGGC | + |
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Preference number: 1 (lower is better) Translates to: QLPWPQGRGPALESR*SHACYIPPQPRDLG Trigger: GCCCAGGTCCCGGGGTTGTGGTGGTATATAGCACGCGTGGGAGCATCGGGACTCCAGGGCTGGACCTCGGCCCTGGGGCCAGGGAAGCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| 3UTR CCA 90 bp | CCCGATGCTCCCACGCGTGCTATATACCACCACAACCCCGGGACCTaGGCTCCGGTGGCTTCGATCAAAGGTCGACTTACAGTATTGAAA | + |
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Preference number: 1 (lower is better) Translates to: PDAPTRAIYHHNPGT*APVASIKGRLTVLK Trigger: TTTCAATACTGTAAGTCGACCTTTGATCGAAGCCACCGGAGCCCAGGTCCCGGGGTTGTGGTGGTATATAGCACGCGTGGGAGCATCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| 3UTR-3UTR TCA 90 bp | CCCAGGGCCGAGGTCCAGCCCTGGAGTCCCGATGCTCCCACGCGTGCTATATACGTCGACTTACAGTATTaGAAAGGAGGTCATAAAAGA | + |
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Preference number: 2 (lower is better) Translates to: PRAEVQPWSPDAPTRAIYVDLQY*KGGHKR Trigger: TCTTTTATGACCTCCTTTTCAATACTGTAAGTCGAC...GTATATAGCACGCGTGGGAGCATCGGGACTCCAGGGCTGGACCTCGGCCCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| 3UTR GCA 72 bp | CGAGGTCCAGCCCTGGAGTCCCGATGCTCCCACGCGTaGTATATACCACCACAACCCCGGGACCTGGGCTCC | + |
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Preference number: 3 (lower is better) Translates to: RGPALESRCSHA*YIPPQPRDLGS Trigger: GGAGCCCAGGTCCCGGGGTTGTGGTGGTATATAGCACGCGTGGGAGCATCGGGACTCCAGGGCTGGACCTCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| 3UTR CCA 72 bp | CCCACGCGTGCTATATACCACCACAACCCCGGGACCTaGGCTCCGGTGGCTTCGATCAAAGGTCGACTTACA | + |
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Preference number: 3 (lower is better) Translates to: PTRAIYHHNPGT*APVASIKGRLT Trigger: TGTAAGTCGACCTTTGATCGAAGCCACCGGAGCCCAGGTCCCGGGGTTGTGGTGGTATATAGCACGCGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| CDS-3UTR CCA 90 bp | GCCCCAGGGCCGAGGTCCAGCCCTGGAGTCCCGATGCTCCCACGCGTGCTATATGGCTCCTCCCGGCTCTaGTCCATGGCGTCGCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: APGPRSSPGVPMLPRVLYGSSRL*SMASLS Trigger: GGACAGCGACGCCATGGACCAGAGCCGGGAGGAGCC...ATATAGCACGCGTGGGAGCATCGGGACTCCAGGGCTGGACCTCGGCCCTGGGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| CDS-3UTR GCA 90 bp | TGTCAGCTTCCCTGGCCCCAGGGCCGAGGTCCAGCCCTGGAGTCCCGATGCTCCACCTGCTCCTGCTGCTaGTGCAGCTGCACCTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: CQLPWPQGRGPALESRCSTCSCC*CSCTCW Trigger: CCAGCAGGTGCAGCTGCAGCAGCAGCAGGAGCAGGT...GGAGCATCGGGACTCCAGGGCTGGACCTCGGCCCTGGGGCCAGGGAAGCTGACA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| CDS-3UTR CCA 90 bp | TGTCAGCTTCCCTGGCCCCAGGGCCGAGGTCCAGCCCTGGAGTCCCGATGCTCCTTTTCCGGGTACATGTaGGCCTCGAGGGAGCGCACC | + |
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Preference number: 4 (lower is better) Translates to: CQLPWPQGRGPALESRCSFSGYM*ASRERT Trigger: GGTGCGCTCCCTCGAGGCCCACATGTACCCGGAAAA...GGAGCATCGGGACTCCAGGGCTGGACCTCGGCCCTGGGGCCAGGGAAGCTGACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| CDS-3UTR CCA 90 bp | GGAAGGGGTGAGGAACGACAGCCTCGGGCTGGCTCTGGGGCGGGAGCAAATACCCAGGCACGATCACTGTaGGGTGGTGGGTGGGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: GRGEERQPRAGSGAGANTQARSL*GGGWGL Trigger: CAGCCCCCACCCACCACCCCACAGTGATCGTGCCTG...GGTATTTGCTCCCGCCCCAGAGCCAGCCCGAGGCTGTCGTTCCTCACCCCTTCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| CDS-3UTR CCA 90 bp | GGAAGGGGTGAGGAACGACAGCCTCGGGCTGGCTCTGGGGCGGGAGCAAATACCCGAATCCGCCTTTCCTaGTCCCTCTGGGTCTCGGGG | + |
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Preference number: 4 (lower is better) Translates to: GRGEERQPRAGSGAGANTRIRLS*SLWVSG Trigger: CCCCGAGACCCAGAGGGACCAGGAAAGGCGGATTCG...GGTATTTGCTCCCGCCCCAGAGCCAGCCCGAGGCTGTCGTTCCTCACCCCTTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| CDS-3UTR CCA 90 bp | AGCTTCCCTGGCCCCAGGGCCGAGGTCCAGCCCTGGAGTCCCGATGCTCCCACGTCCGCTCGTTGCTGTTaGCAATCTCGCGTCGAATCC | + |
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Preference number: 4 (lower is better) Translates to: SFPGPRAEVQPWSPDAPTSARCC*QSRVES Trigger: GGATTCGACGCGAGATTGCCAACAGCAACGAGCGGA...CGTGGGAGCATCGGGACTCCAGGGCTGGACCTCGGCCCTGGGGCCAGGGAAGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| CDS-3UTR TCA 90 bp | CCCAGGGCCGAGGTCCAGCCCTGGAGTCCCGATGCTCCCACGCGTGCTATATACACTGGAAGCCCGCGTTaGTACTCTGCATGCGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: PRAEVQPWSPDAPTRAIYTGSPR*YSACAS Trigger: GGAGGCGCATGCAGAGTATCAACGCGGGCTTCCAGT...GTATATAGCACGCGTGGGAGCATCGGGACTCCAGGGCTGGACCTCGGCCCTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| CDS-3UTR GCA 90 bp | CCCAGGGCCGAGGTCCAGCCCTGGAGTCCCGATGCTCCCACGCGTGCTATATACTGCGCCTCCGCTCGTTaGTGTTGGCAATCTCGCGTC | + |
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Preference number: 4 (lower is better) Translates to: PRAEVQPWSPDAPTRAIYCASAR*CWQSRV Trigger: GACGCGAGATTGCCAACAGCAACGAGCGGAGGCGCA...GTATATAGCACGCGTGGGAGCATCGGGACTCCAGGGCTGGACCTCGGCCCTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| CDS-3UTR GCA 90 bp | CCCAGGGCCGAGGTCCAGCCCTGGAGTCCCGATGCTCCCACGCGTGCTATATACCCCGCGTTGATACTCTaGATGCGCCTCCGCTCGTTG | + |
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Preference number: 4 (lower is better) Translates to: PRAEVQPWSPDAPTRAIYPALIL*MRLRSL Trigger: CAACGAGCGGAGGCGCATGCAGAGTATCAACGCGGG...GTATATAGCACGCGTGGGAGCATCGGGACTCCAGGGCTGGACCTCGGCCCTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| CDS-3UTR GCA 90 bp | TGTCAGCTTCCCTGGCCCCAGGGCCGAGGTCCAGCCCTGGAGTCCCGATGCTCCTGCTGCAGCTGCACCTaGTGGGCAATCACCTTGAGT | + |
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Preference number: 4 (lower is better) Translates to: CQLPWPQGRGPALESRCSCCSCT*WAITLS Trigger: ACTCAAGGTGATTGCCCAGCAGGTGCAGCTGCAGCA...GGAGCATCGGGACTCCAGGGCTGGACCTCGGCCCTGGGGCCAGGGAAGCTGACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| CDS-3UTR GCA 90 bp | CCCAGGGCCGAGGTCCAGCCCTGGAGTCCCGATGCTCCCACGCGTGCTATATACTGCTGCTGCTGCAGCTaGACCTGCTGGGCAATCACC | + |
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Preference number: 4 (lower is better) Translates to: PRAEVQPWSPDAPTRAIYCCCCS*TCWAIT Trigger: GGTGATTGCCCAGCAGGTGCAGCTGCAGCAGCAGCA...GTATATAGCACGCGTGGGAGCATCGGGACTCCAGGGCTGGACCTCGGCCCTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| CDS-3UTR GCA 90 bp | CCCAGGGCCGAGGTCCAGCCCTGGAGTCCCGATGCTCCCACGCGTGCTATATACTCTAGCTTCTCCTGGTaGAGCAGCCGCACCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: PRAEVQPWSPDAPTRAIYSSFSW*SSRTCS Trigger: GGAGCAGGTGCGGCTGCTGCACCAGGAGAAGCTAGA...GTATATAGCACGCGTGGGAGCATCGGGACTCCAGGGCTGGACCTCGGCCCTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| CDS-3UTR GCA 90 bp | TGTCAGCTTCCCTGGCCCCAGGGCCGAGGTCCAGCCCTGGAGTCCCGATGCTCCTGGGTGCCCTCAATGTaGTGGATGGCCTGCACAATG | + |
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Preference number: 4 (lower is better) Translates to: CQLPWPQGRGPALESRCSWVPSM*WMACTM Trigger: CATTGTGCAGGCCATCCAGCACATTGAGGGCACCCA...GGAGCATCGGGACTCCAGGGCTGGACCTCGGCCCTGGGGCCAGGGAAGCTGACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| CDS-3UTR CCA 90 bp | CCCAGGGCCGAGGTCCAGCCCTGGAGTCCCGATGCTCCCACGCGTGCTATATACCTTTCCTGGTCCCTCTaGGTCTCGGGGGTCAGTGGA | + |
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Preference number: 4 (lower is better) Translates to: PRAEVQPWSPDAPTRAIYLSWSL*VSGVSG Trigger: TCCACTGACCCCCGAGACCCAGAGGGACCAGGAAAG...GTATATAGCACGCGTGGGAGCATCGGGACTCCAGGGCTGGACCTCGGCCCTGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| CDS-3UTR TCA 90 bp | AGCTTCCCTGGCCCCAGGGCCGAGGTCCAGCCCTGGAGTCCCGATGCTCCCACGGCTGGGCAATCACCTTaGGTTTTTCCGGGTACATGT | + |
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Preference number: 4 (lower is better) Translates to: SFPGPRAEVQPWSPDAPTAGQSP*VFPGTC Trigger: ACATGTACCCGGAAAAACTCAAGGTGATTGCCCAGC...CGTGGGAGCATCGGGACTCCAGGGCTGGACCTCGGCCCTGGGGCCAGGGAAGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| CDS-3UTR CCA 90 bp | GCCCCAGGGCCGAGGTCCAGCCCTGGAGTCCCGATGCTCCCACGCGTGCTATATAGGGTCTTGAGGGACTaGAAGCCCGCGTTGATACTC | + |
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Preference number: 4 (lower is better) Translates to: APGPRSSPGVPMLPRVLYRVLRD*KPALIL Trigger: GAGTATCAACGCGGGCTTCCAGTCCCTCAAGACCCT...ATATAGCACGCGTGGGAGCATCGGGACTCCAGGGCTGGACCTCGGCCCTGGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| CDS-3UTR TCA 90 bp | GGAAGGGGTGAGGAACGACAGCCTCGGGCTGGCTCTGGGGCGGGAGCAAATACCGACAGAGTTGATGACTaGGGAGGGACCCATGGTGAC | + |
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Preference number: 4 (lower is better) Translates to: GRGEERQPRAGSGAGANTDRVDD*GGTHGD Trigger: GTCACCATGGGTCCCTCCTCAGTCATCAACTCTGTC...GGTATTTGCTCCCGCCCCAGAGCCAGCCCGAGGCTGTCGTTCCTCACCCCTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| CDS-3UTR GCA 90 bp | CCCAGGGCCGAGGTCCAGCCCTGGAGTCCCGATGCTCCCACGCGTGCTATATACTGTCGGGTGAGCCAATaGCCTCATCCTTGTCTTCCG | + |
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Preference number: 4 (lower is better) Translates to: PRAEVQPWSPDAPTRAIYCRVSQ*PHPCLP Trigger: CGGAAGACAAGGATGAGGGCATTGGCTCACCCGACA...GTATATAGCACGCGTGGGAGCATCGGGACTCCAGGGCTGGACCTCGGCCCTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| CDS-3UTR GCA 90 bp | CCCAGGGCCGAGGTCCAGCCCTGGAGTCCCGATGCTCCCACGCGTGCTATATACCCTGTTTGTCCTGGGTaGCCTCAATGTGCTGGATGG | + |
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Preference number: 4 (lower is better) Translates to: PRAEVQPWSPDAPTRAIYPVCPG*PQCAGW Trigger: CCATCCAGCACATTGAGGGCACCCAGGACAAACAGG...GTATATAGCACGCGTGGGAGCATCGGGACTCCAGGGCTGGACCTCGGCCCTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| CDS-3UTR CCA 90 bp | TGTCAGCTTCCCTGGCCCCAGGGCCGAGGTCCAGCCCTGGAGTCCCGATGCTCCTATTCTGCTGTCTGCTaGAGAATGGCTGCCTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: CQLPWPQGRGPALESRCSYSAVC*RMAALL Trigger: CAGCAAGGCAGCCATTCTCCAGCAGACAGCAGAATA...GGAGCATCGGGACTCCAGGGCTGGACCTCGGCCCTGGGGCCAGGGAAGCTGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| CDS-3UTR CCA 90 bp | GGAAGGGGTGAGGAACGACAGCCTCGGGCTGGCTCTGGGGCGGGAGCAAATACCGTGACAACATTGATGTaGTGGGAGGAAGGCGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: GRGEERQPRAGSGAGANTVTTLM*WEEGGA Trigger: AGCCCCGCCTTCCTCCCACCACATCAATGTTGTCAC...GGTATTTGCTCCCGCCCCAGAGCCAGCCCGAGGCTGTCGTTCCTCACCCCTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| CDS-3UTR CCA 90 bp | CCCAGGGCCGAGGTCCAGCCCTGGAGTCCCGATGCTCCCACGCGTGCTATATACAGCTCCTGTTTGTCCTaGGTGCCCTCAATGTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: PRAEVQPWSPDAPTRAIYSSCLS*VPSMCW Trigger: CCAGCACATTGAGGGCACCCAGGACAAACAGGAGCT...GTATATAGCACGCGTGGGAGCATCGGGACTCCAGGGCTGGACCTCGGCCCTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| CDS-3UTR TCA 90 bp | GGAAGGGGTGAGGAACGACAGCCTCGGGCTGGCTCTGGGGCGGGAGCAAATACCGAATGGCTGCCTTGCTaGGCTTCTCTCCATCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: GRGEERQPRAGSGAGANTEWLPC*ASLHLC Trigger: ACACAGATGGAGAGAAGCTCAGCAAGGCAGCCATTC...GGTATTTGCTCCCGCCCCAGAGCCAGCCCGAGGCTGTCGTTCCTCACCCCTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| CDS-3UTR TCA 90 bp | CAACCCCGGGACCTGGGCTCCGGTGGCTTCGATCAAAGGTCGACTTACAGTATTCCGCCGCTTCGGGGATaGGCCACTCAGCTCCTGGAT | + |
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Preference number: 4 (lower is better) Translates to: QPRDLGSGGFDQRSTYSIPPLRG*ATQLLD Trigger: ATCCAGGAGCTGAGTGGCTCATCCCCGAAGCGGCGG...AATACTGTAAGTCGACCTTTGATCGAAGCCACCGGAGCCCAGGTCCCGGGGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| CDS-3UTR GCA 90 bp | TGTCAGCTTCCCTGGCCCCAGGGCCGAGGTCCAGCCCTGGAGTCCCGATGCTCCATGTATTCTGCTGTCTaGTGGAGAATGGCTGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: CQLPWPQGRGPALESRCSMYSAV*WRMAAL Trigger: CAAGGCAGCCATTCTCCAGCAGACAGCAGAATACAT...GGAGCATCGGGACTCCAGGGCTGGACCTCGGCCCTGGGGCCAGGGAAGCTGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| CDS-3UTR GCA 90 bp | TGTCAGCTTCCCTGGCCCCAGGGCCGAGGTCCAGCCCTGGAGTCCCGATGCTCCTTGAGCTGTGTGTTCTaGTGCAGGAGTCTAGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: CQLPWPQGRGPALESRCSLSCVF*CRSLVF Trigger: GAAGACTAGACTCCTGCAGCAGAACACACAGCTCAA...GGAGCATCGGGACTCCAGGGCTGGACCTCGGCCCTGGGGCCAGGGAAGCTGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| CDS-3UTR CCA 90 bp | GACCTGGGCTCCGGTGGCTTCGATCAAAGGTCGACTTACAGTATTGAAAAGGAGCCCGGCTCTGGTCCATaGCGTCGCTGTCCGAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: DLGSGGFDQRSTYSIEKEPGSGP*RRCPRP Trigger: AGGCCTCGGACAGCGACGCCATGGACCAGAGCCGGG...CTCCTTTTCAATACTGTAAGTCGACCTTTGATCGAAGCCACCGGAGCCCAGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| CDS-3UTR GCA 90 bp | GGAAGGGGTGAGGAACGACAGCCTCGGGCTGGCTCTGGGGCGGGAGCAAATACCAGAGAAGATGTATTCTaGTGTCTGCTGGAGAATGGC | + |
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Preference number: 4 (lower is better) Translates to: GRGEERQPRAGSGAGANTREDVF*CLLENG Trigger: GCCATTCTCCAGCAGACAGCAGAATACATCTTCTCT...GGTATTTGCTCCCGCCCCAGAGCCAGCCCGAGGCTGTCGTTCCTCACCCCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| CDS-3UTR CCA 90 bp | GACCTGGGCTCCGGTGGCTTCGATCAAAGGTCGACTTACAGTATTGAAAAGGAGGCGGTATCAGAGGTGTaGGCGTCTGGGCAGCTGCGG | + |
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Preference number: 4 (lower is better) Translates to: DLGSGGFDQRSTYSIEKEAVSEV*ASGQLR Trigger: CCGCAGCTGCCCAGACGCCCACACCTCTGATACCGC...CTCCTTTTCAATACTGTAAGTCGACCTTTGATCGAAGCCACCGGAGCCCAGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| CDS-3UTR CCA 90 bp | GACCTGGGCTCCGGTGGCTTCGATCAAAGGTCGACTTACAGTATTGAAAAGGAGGGAGGAAGGCGGGGCTaGTGCAGGCACGATCACTGT | + |
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Preference number: 4 (lower is better) Translates to: DLGSGGFDQRSTYSIEKEGGRRG*CRHDHC Trigger: ACAGTGATCGTGCCTGCACCAGCCCCGCCTTCCTCC...CTCCTTTTCAATACTGTAAGTCGACCTTTGATCGAAGCCACCGGAGCCCAGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| CDS-3UTR GCA 90 bp | GACCTGGGCTCCGGTGGCTTCGATCAAAGGTCGACTTACAGTATTGAAAAGGAGCTGCTGGAGAATGGCTaGCTTGCTGAGCTTCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: DLGSGGFDQRSTYSIEKELLENG*LAELLS Trigger: GGAGAGAAGCTCAGCAAGGCAGCCATTCTCCAGCAG...CTCCTTTTCAATACTGTAAGTCGACCTTTGATCGAAGCCACCGGAGCCCAGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| CDS-3UTR CCA 90 bp | GACCTGGGCTCCGGTGGCTTCGATCAAAGGTCGACTTACAGTATTGAAAAGGAGGGATGGCCTGCACAATaGTGTCCAGATTTTGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: DLGSGGFDQRSTYSIEKEGWPAQ*CPDFAG Trigger: CCCGGCAAAATCTGGACACCATTGTGCAGGCCATCC...CTCCTTTTCAATACTGTAAGTCGACCTTTGATCGAAGCCACCGGAGCCCAGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| CDS-3UTR CCA 90 bp | GACCTGGGCTCCGGTGGCTTCGATCAAAGGTCGACTTACAGTATTGAAAAGGAGGAGCCACTCAGCTCCTaGATAAAGCGCTTGAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: DLGSGGFDQRSTYSIEKEEPLSS*IKRLSC Trigger: ACAGCTCAAGCGCTTTATCCAGGAGCTGAGTGGCTC...CTCCTTTTCAATACTGTAAGTCGACCTTTGATCGAAGCCACCGGAGCCCAGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| CDS-3UTR GCA 90 bp | GACCTGGGCTCCGGTGGCTTCGATCAAAGGTCGACTTACAGTATTGAAAAGGAGATGGTGTCCAGATTTTaGCGGGATGTAGAGACAGAG | + |
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Preference number: 4 (lower is better) Translates to: DLGSGGFDQRSTYSIEKEMVSRF*RDVETE Trigger: CTCTGTCTCTACATCCCGGCAAAATCTGGACACCAT...CTCCTTTTCAATACTGTAAGTCGACCTTTGATCGAAGCCACCGGAGCCCAGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| CDS-3UTR GCA 90 bp | GGCTTCGATCAAAGGTCGACTTACAGTATTGAAAAGGAGGTCATAAAAGAGACCAGCTGTGTGTTCTGCTaGAGGAGTCTAGTCTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: GFDQRSTYSIEKEVIKETSCVFC*RSLVFS Trigger: GGAGAAGACTAGACTCCTGCAGCAGAACACACAGCT...GGTCTCTTTTATGACCTCCTTTTCAATACTGTAAGTCGACCTTTGATCGAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| CDS-3UTR GCA 90 bp | GGCTTCGATCAAAGGTCGACTTACAGTATTGAAAAGGAGGTCATAAAAGAGACCATGTGCTGGATGGCCTaGACAATGGTGTCCAGATTT | + |
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Preference number: 4 (lower is better) Translates to: GFDQRSTYSIEKEVIKETMCWMA*TMVSRF Trigger: AAATCTGGACACCATTGTGCAGGCCATCCAGCACAT...GGTCTCTTTTATGACCTCCTTTTCAATACTGTAAGTCGACCTTTGATCGAAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| CDS CCA 90 bp | AGGGAAGCTCCCCGTCCCCCAAAGGCTCCTCCCGGCTCTGGTCCATaGCGTCGCTGTCCGAGGCCTCGGAGTCCGAGGCGGTATCAGAGG | + |
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Preference number: 5 (lower is better) Translates to: REAPRPPKAPPGSGP*RRCPRPRSPRRYQR Trigger: CCTCTGATACCGCCTCGGACTCCGAGGCCTCGGACAGCGACGCCATGGACCAGAGCCGGGAGGAGCCTTTGGGGGACGGGGAGCTTCCCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| CDS-3UTR CAA 90 bp | AGCTTCCCTGGCCCCAGGGCCGAGGTCCAGCCCTGGAGTCCCGATGCTCCCACGCTCCGCTCGTTGCTGTaGGCAATCTCGCGTCGAATC | + |
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Preference number: 5 (lower is better) Translates to: SFPGPRAEVQPWSPDAPTLRSLL*AISRRI Trigger: GATTCGACGCGAGATTGCCAACAGCAACGAGCGGAG...CGTGGGAGCATCGGGACTCCAGGGCTGGACCTCGGCCCTGGGGCCAGGGAAGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| CDS-3UTR CAA 90 bp | TGTCAGCTTCCCTGGCCCCAGGGCCGAGGTCCAGCCCTGGAGTCCCGATGCTCCGACTGGAAGCCCGCGTaGATACTCTGCATGCGCCTC | + |
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Preference number: 5 (lower is better) Translates to: CQLPWPQGRGPALESRCSDWKPA*ILCMRL Trigger: GAGGCGCATGCAGAGTATCAACGCGGGCTTCCAGTC...GGAGCATCGGGACTCCAGGGCTGGACCTCGGCCCTGGGGCCAGGGAAGCTGACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| CDS CCA 90 bp | GCGTCGCTGTCCGAGGCCTCGGAGTCCGAGGCGGTATCAGAGGTGTaGGCGTCTGGGCAGCTGCGGACAGACTTCACGATAACTGCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: ASLSEASESEAVSEV*ASGQLRTDFTITAR Trigger: GCGAGCAGTTATCGTGAAGTCTGTCCGCAGCTGCCCAGACGCCCACACCTCTGATACCGCCTCGGACTCCGAGGCCTCGGACAGCGACGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
||
| CDS-3UTR CAA 90 bp | TGTCAGCTTCCCTGGCCCCAGGGCCGAGGTCCAGCCCTGGAGTCCCGATGCTCCCTCCTTGTCCAGCTGTaGTCGCAGCTCGATCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: CQLPWPQGRGPALESRCSLLVQL*SQLDHL Trigger: GAGATGATCGAGCTGCGACAACAGCTGGACAAGGAG...GGAGCATCGGGACTCCAGGGCTGGACCTCGGCCCTGGGGCCAGGGAAGCTGACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
||
| CDS CCA 90 bp | GTCCGAGGCCTCGGAGTCCGAGGCGGTATCAGAGGTGTGGGCGTCTaGGCAGCTGCGGACAGACTTCACGATAACTGCTCGCCTCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: VRGLGVRGGIRGVGV*AAADRLHDNCSPLF Trigger: GAACAGAGGCGAGCAGTTATCGTGAAGTCTGTCCGCAGCTGCCCAGACGCCCACACCTCTGATACCGCCTCGGACTCCGAGGCCTCGGAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
||
| CDS-3UTR CAA 90 bp | GCCCCAGGGCCGAGGTCCAGCCCTGGAGTCCCGATGCTCCCACGCGTGCTATATCCCATGGTGACAACATaGATGTGGTGGGAGGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: APGPRSSPGVPMLPRVLYPMVTT*MWWEEG Trigger: GCCTTCCTCCCACCACATCAATGTTGTCACCATGGG...ATATAGCACGCGTGGGAGCATCGGGACTCCAGGGCTGGACCTCGGCCCTGGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
||
| CDS TCA 90 bp | CTCTCTCCTAAGGTCCTCAGCCTTCTCATCCTCCCAGATGTCGGGTaGGCCAATGCCCTCATCCTTGTCTTCCGCCCGCCGCCGCTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: LSPKVLSLLILPDVG*ANALILVFRPPPLR Trigger: CCGAAGCGGCGGCGGGCGGAAGACAAGGATGAGGGCATTGGCTCACCCGACATCTGGGAGGATGAGAAGGCTGAGGACCTTAGGAGAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005862.9 ENSMUST00000229956.2 ENSMUST00000230875.2 |
||
| CDS TCA 90 bp | CCTGCTCCTGCTGCTGCTGCAGCTGCACCTGCTGGGCAATCACCTTaGGTTTTTCCGGGTACATGTGGGCCTCGAGGGAGCGCACCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PAPAAAAAAPAGQSP*VFPGTCGPRGSAPA Trigger: AGCAGGTGCGCTCCCTCGAGGCCCACATGTACCCGGAAAAACTCAAGGTGATTGCCCAGCAGGTGCAGCTGCAGCAGCAGCAGGAGCAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000005862.9 ENSMUST00000229956.2 ENSMUST00000230875.2 |
||
| CDS-3UTR CAA 90 bp | CCCAGGGCCGAGGTCCAGCCCTGGAGTCCCGATGCTCCCACGCGTGCTATATACTCCTGGATAAAGCGCTaGAGCTGTGTGTTCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PRAEVQPWSPDAPTRAIYSWIKR*SCVFCC Trigger: GCAGCAGAACACACAGCTCAAGCGCTTTATCCAGGA...GTATATAGCACGCGTGGGAGCATCGGGACTCCAGGGCTGGACCTCGGCCCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
||
| CDS CCA 90 bp | CTCCGCTCGTTGCTGTTGGCAATCTCGCGTCGAATCCGCCTTTCCTaGTCCCTCTGGGTCTCGGGGGTCAGTGGAATGTTGGCTAGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: LRSLLLAISRRIRLS*SLWVSGVSGMLARL Trigger: TAGCCTAGCCAACATTCCACTGACCCCCGAGACCCAGAGGGACCAGGAAAGGCGGATTCGACGCGAGATTGCCAACAGCAACGAGCGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
||
| CDS CCA 90 bp | TTGTCTTCCGCCCGCCGCCGCTTCGGGGATGAGCCACTCAGCTCCTaGATAAAGCGCTTGAGCTGTGTGTTCTGCTGCAGGAGTCTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LSSARRRFGDEPLSS*IKRLSCVFCCRSLV Trigger: GACTAGACTCCTGCAGCAGAACACACAGCTCAAGCGCTTTATCCAGGAGCTGAGTGGCTCATCCCCGAAGCGGCGGCGGGCGGAAGACAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005862.9 ENSMUST00000229956.2 ENSMUST00000230875.2 |
||
| CDS CCA 90 bp | GAGTTGATGACTGAGGAGGGACCCATGGTGACAACATTGATGTGGTaGGAGGAAGGCGGGGCTGGTGCAGGCACGATCACTGTGGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ELMTEEGPMVTTLMW*EEGGAGAGTITVGW Trigger: CCACCCCACAGTGATCGTGCCTGCACCAGCCCCGCCTTCCTCCCACCACATCAATGTTGTCACCATGGGTCCCTCCTCAGTCATCAACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
||
| CDS CCA 90 bp | CTCCGCTCGTTGCTGTTGGCAATCTCGCGTCGAATCCGCCTTTCCTaGTCCCTCTGGGTCTCGGGGGTCAGTGGAATGTTGGCTAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LRSLLLAISRRIRLS*SLWVSGVSGMLARS Trigger: AGACCTAGCCAACATTCCACTGACCCCCGAGACCCAGAGGGACCAGGAAAGGCGGATTCGACGCGAGATTGCCAACAGCAACGAGCGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229956.2 |
||
| CDS-3UTR CAA 90 bp | CAACCCCGGGACCTGGGCTCCGGTGGCTTCGATCAAAGGTCGACTTACAGTATTTGGGGAATGAGGGTCTaGAGGGACTGGAAGCCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: QPRDLGSGGFDQRSTYSIWGMRV*RDWKPA Trigger: CGCGGGCTTCCAGTCCCTCAAGACCCTCATTCCCCA...AATACTGTAAGTCGACCTTTGATCGAAGCCACCGGAGCCCAGGTCCCGGGGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
||
| CDS GCA 90 bp | TGGGGAATGAGGGTCTTGAGGGACTGGAAGCCCGCGTTGATACTCTaGATGCGCCTCCGCTCGTTGCTGTTGGCAATCTCGCGTCGAATC | + |
|
Preference number: 5 (lower is better) Translates to: WGMRVLRDWKPALIL*MRLRSLLLAISRRI Trigger: GATTCGACGCGAGATTGCCAACAGCAACGAGCGGAGGCGCATGCAGAGTATCAACGCGGGCTTCCAGTCCCTCAAGACCCTCATTCCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005862.9 ENSMUST00000229956.2 |
||
| CDS CCA 90 bp | TTGCTGTTGGCAATCTCGCGTCGAATCCGCCTTTCCTGGTCCCTCTaGGTCTCGGGGGTCAGTGGAATGTTGGCTAGGCTACAGAGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LLLAISRRIRLSWSL*VSGVSGMLARLQSP Trigger: AGGGCTCTGTAGCCTAGCCAACATTCCACTGACCCCCGAGACCCAGAGGGACCAGGAAAGGCGGATTCGACGCGAGATTGCCAACAGCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
||
| CDS-3UTR CAA 90 bp | CCCAGGGCCGAGGTCCAGCCCTGGAGTCCCGATGCTCCCACGCGTGCTATATACAATGGTGTCCAGATTTaGCCGGGATGTAGAGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: PRAEVQPWSPDAPTRAIYNGVQI*PGCRDR Trigger: TCTGTCTCTACATCCCGGCAAAATCTGGACACCATT...GTATATAGCACGCGTGGGAGCATCGGGACTCCAGGGCTGGACCTCGGCCCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
||
| CDS-3UTR CAA 90 bp | GACCTGGGCTCCGGTGGCTTCGATCAAAGGTCGACTTACAGTATTGAAAAGGAGTCTTCCAGCTCCTGTTaGTCCTGGGTGCCCTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: DLGSGGFDQRSTYSIEKESSSSC*SWVPSM Trigger: CATTGAGGGCACCCAGGACAAACAGGAGCTGGAAGA...CTCCTTTTCAATACTGTAAGTCGACCTTTGATCGAAGCCACCGGAGCCCAGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
||
| CDS-3UTR CAA 90 bp | GACCTGGGCTCCGGTGGCTTCGATCAAAGGTCGACTTACAGTATTGAAAAGGAGTGGAGAATGGCTGCCTaGCTGAGCTTCTCTCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: DLGSGGFDQRSTYSIEKEWRMAA*LSFSPS Trigger: AGATGGAGAGAAGCTCAGCAAGGCAGCCATTCTCCA...CTCCTTTTCAATACTGTAAGTCGACCTTTGATCGAAGCCACCGGAGCCCAGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
||
| CDS TCA 90 bp | AATGGTGTCCAGATTTTGCCGGGATGTAGAGACAGAGTTGATGACTaGGGAGGGACCCATGGTGACAACATTGATGTGGTGGGAGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: NGVQILPGCRDRVDD*GGTHGDNIDVVGGR Trigger: CCTTCCTCCCACCACATCAATGTTGTCACCATGGGTCCCTCCTCAGTCATCAACTCTGTCTCTACATCCCGGCAAAATCTGGACACCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
||
| CDS-3UTR CAA 90 bp | GGCTTCGATCAAAGGTCGACTTACAGTATTGAAAAGGAGGTCATAAAAGAGACCTGCTGGGCAATCACCTaGAGTTTTTCCGGGTACATG | + |
|
Preference number: 5 (lower is better) Translates to: GFDQRSTYSIEKEVIKETCWAIT*SFSGYM Trigger: CATGTACCCGGAAAAACTCAAGGTGATTGCCCAGCA...GGTCTCTTTTATGACCTCCTTTTCAATACTGTAAGTCGACCTTTGATCGAAGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
||
| CDS CCA 72 bp | CCCCGTCCCCCAAAGGCTCCTCCCGGCTCTGGTCCATaGCGTCGCTGTCCGAGGCCTCGGAGTCCGAGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: PRPPKAPPGSGP*RRCPRPRSPRR Trigger: CCGCCTCGGACTCCGAGGCCTCGGACAGCGACGCCATGGACCAGAGCCGGGAGGAGCCTTTGGGGGACGGGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
||
| CDS CCA 72 bp | GGAAGCTCCCCGTCCCCCAAAGGCTCCTCCCGGCTCTaGTCCATGGCGTCGCTGTCCGAGGCCTCGGAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: GSSPSPKGSSRL*SMASLSEASES Trigger: GGACTCCGAGGCCTCGGACAGCGACGCCATGGACCAGAGCCGGGAGGAGCCTTTGGGGGACGGGGAGCTTCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
||
| CDS CAA 72 bp | TCCTCCCAGATGTCGGGTGAGCCAATGCCCTCATCCTaGTCTTCCGCCCGCCGCCGCTTCGGGGATGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SSQMSGEPMPSS*SSARRRFGDEP Trigger: TGGCTCATCCCCGAAGCGGCGGCGGGCGGAAGACAAGGATGAGGGCATTGGCTCACCCGACATCTGGGAGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005862.9 ENSMUST00000229956.2 ENSMUST00000230875.2 |
||
| CDS CAA 90 bp | GCCTTCTCATCCTCCCAGATGTCGGGTGAGCCAATGCCCTCATCCTaGTCTTCCGCCCGCCGCCGCTTCGGGGATGAGCCACTCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: AFSSSQMSGEPMPSS*SSARRRFGDEPLSS Trigger: GGAGCTGAGTGGCTCATCCCCGAAGCGGCGGCGGGCGGAAGACAAGGATGAGGGCATTGGCTCACCCGACATCTGGGAGGATGAGAAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005862.9 ENSMUST00000229956.2 ENSMUST00000230875.2 |
||
| CDS GCA 72 bp | CAGCCTTCTCATCCTCCCAGATGTCGGGTGAGCCAATaGCCTCATCCTTGTCTTCCGCCCGCCGCCGCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: QPSHPPRCRVSQ*PHPCLPPAAAS Trigger: CGAAGCGGCGGCGGGCGGAAGACAAGGATGAGGGCATTGGCTCACCCGACATCTGGGAGGATGAGAAGGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005862.9 ENSMUST00000229956.2 ENSMUST00000230875.2 |
||
| CDS CCA 72 bp | TCCGAGGCCTCGGAGTCCGAGGCGGTATCAGAGGTGTaGGCGTCTGGGCAGCTGCGGACAGACTTCACGATA | + |
|
Preference number: 6 (lower is better) Translates to: SEASESEAVSEV*ASGQLRTDFTI Trigger: TATCGTGAAGTCTGTCCGCAGCTGCCCAGACGCCCACACCTCTGATACCGCCTCGGACTCCGAGGCCTCGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
||
| CDS CAA 90 bp | ACCTGCTCCTGCTGCTGCTGCAGCTGCACCTGCTGGGCAATCACCTaGAGTTTTTCCGGGTACATGTGGGCCTCGAGGGAGCGCACCTGC | + |
|
Preference number: 6 (lower is better) Translates to: TCSCCCCSCTCWAIT*SFSGYMWASRERTC Trigger: GCAGGTGCGCTCCCTCGAGGCCCACATGTACCCGGAAAAACTCAAGGTGATTGCCCAGCAGGTGCAGCTGCAGCAGCAGCAGGAGCAGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000005862.9 ENSMUST00000229956.2 ENSMUST00000230875.2 |
||
| CDS TCA 72 bp | CTCATCCTTGTCTTCCGCCCGCCGCCGCTTCGGGGATaGGCCACTCAGCTCCTGGATAAAGCGCTTGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LILVFRPPPLRG*ATQLLDKALEL Trigger: CAGCTCAAGCGCTTTATCCAGGAGCTGAGTGGCTCATCCCCGAAGCGGCGGCGGGCGGAAGACAAGGATGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005862.9 ENSMUST00000229956.2 ENSMUST00000230875.2 |
||
| CDS CCA 72 bp | CTCGGAGTCCGAGGCGGTATCAGAGGTGTGGGCGTCTaGGCAGCTGCGGACAGACTTCACGATAACTGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: LGVRGGIRGVGV*AAADRLHDNCS Trigger: CGAGCAGTTATCGTGAAGTCTGTCCGCAGCTGCCCAGACGCCCACACCTCTGATACCGCCTCGGACTCCGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
||
| CDS CAA 90 bp | TGGAAGCCCGCGTTGATACTCTGCATGCGCCTCCGCTCGTTGCTGTaGGCAATCTCGCGTCGAATCCGCCTTTCCTGGTCCCTCTGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: WKPALILCMRLRSLL*AISRRIRLSWSLWV Trigger: GACCCAGAGGGACCAGGAAAGGCGGATTCGACGCGAGATTGCCAACAGCAACGAGCGGAGGCGCATGCAGAGTATCAACGCGGGCTTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005862.9 ENSMUST00000229956.2 |
||
| CDS CAA 90 bp | AGGGACTGGAAGCCCGCGTTGATACTCTGCATGCGCCTCCGCTCGTaGCTGTTGGCAATCTCGCGTCGAATCCGCCTTTCCTGGTCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: RDWKPALILCMRLRS*LLAISRRIRLSWSL Trigger: GAGGGACCAGGAAAGGCGGATTCGACGCGAGATTGCCAACAGCAACGAGCGGAGGCGCATGCAGAGTATCAACGCGGGCTTCCAGTCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005862.9 ENSMUST00000229956.2 |
||
| CDS TCA 72 bp | AAGGTCCTCAGCCTTCTCATCCTCCCAGATGTCGGGTaGGCCAATGCCCTCATCCTTGTCTTCCGCCCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: KVLSLLILPDVG*ANALILVFRPP Trigger: CGGCGGGCGGAAGACAAGGATGAGGGCATTGGCTCACCCGACATCTGGGAGGATGAGAAGGCTGAGGACCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005862.9 ENSMUST00000229956.2 ENSMUST00000230875.2 |
||
| CDS CAA 90 bp | AGGGAGCGCACCTGCTCTTCCAGCATCATCCGCACGGAGCGCTCCTaGTCCAGCTGTTGTCGCAGCTCGATCATCTCTCTCCTAAGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RERTCSSSIIRTERS*SSCCRSSIISLLRS Trigger: GGACCTTAGGAGAGAGATGATCGAGCTGCGACAACAGCTGGACAAGGAGCGCTCCGTGCGGATGATGCTGGAAGAGCAGGTGCGCTCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005862.9 ENSMUST00000229956.2 ENSMUST00000230875.2 |
||
| CDS GCA 72 bp | AGGGTCTTGAGGGACTGGAAGCCCGCGTTGATACTCTaGATGCGCCTCCGCTCGTTGCTGTTGGCAATCTCG | + |
|
Preference number: 6 (lower is better) Translates to: RVLRDWKPALIL*MRLRSLLLAIS Trigger: CGAGATTGCCAACAGCAACGAGCGGAGGCGCATGCAGAGTATCAACGCGGGCTTCCAGTCCCTCAAGACCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005862.9 ENSMUST00000229956.2 |
||
| CDS CCA 72 bp | GCAATCTCGCGTCGAATCCGCCTTTCCTGGTCCCTCTaGGTCTCGGGGGTCAGTGGAATGTTGGCTAGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: AISRRIRLSWSL*VSGVSGMLARL Trigger: TAGCCTAGCCAACATTCCACTGACCCCCGAGACCCAGAGGGACCAGGAAAGGCGGATTCGACGCGAGATTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
||
| CDS CCA 72 bp | CGCACCTGCTCCTGCTGCTGCTGCAGCTGCACCTGCTaGGCAATCACCTTGAGTTTTTCCGGGTACATGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RTCSCCCCSCTC*AITLSFSGYMW Trigger: CCACATGTACCCGGAAAAACTCAAGGTGATTGCCCAGCAGGTGCAGCTGCAGCAGCAGCAGGAGCAGGTGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000005862.9 ENSMUST00000229956.2 ENSMUST00000230875.2 |
||
| CDS CCA 72 bp | ACTGAGGAGGGACCCATGGTGACAACATTGATGTGGTaGGAGGAAGGCGGGGCTGGTGCAGGCACGATCACT | + |
|
Preference number: 6 (lower is better) Translates to: TEEGPMVTTLMW*EEGGAGAGTIT Trigger: AGTGATCGTGCCTGCACCAGCCCCGCCTTCCTCCCACCACATCAATGTTGTCACCATGGGTCCCTCCTCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005862.9 ENSMUST00000230875.2 |
||
| CDS CCA 72 bp | GCAATCTCGCGTCGAATCCGCCTTTCCTGGTCCCTCTaGGTCTCGGGGGTCAGTGGAATGTTGGCTAGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: AISRRIRLSWSL*VSGVSGMLARS Trigger: AGACCTAGCCAACATTCCACTGACCCCCGAGACCCAGAGGGACCAGGAAAGGCGGATTCGACGCGAGATTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229956.2 |
||
| CDS CAA 72 bp | GCGTTGATACTCTGCATGCGCCTCCGCTCGTTGCTGTaGGCAATCTCGCGTCGAATCCGCCTTTCCTGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: ALILCMRLRSLL*AISRRIRLSWS Trigger: GGACCAGGAAAGGCGGATTCGACGCGAGATTGCCAACAGCAACGAGCGGAGGCGCATGCAGAGTATCAACGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005862.9 ENSMUST00000229956.2 |
||
| CDS CAA 72 bp | AAGCCCGCGTTGATACTCTGCATGCGCCTCCGCTCGTaGCTGTTGGCAATCTCGCGTCGAATCCGCCTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: KPALILCMRLRS*LLAISRRIRLS Trigger: GGAAAGGCGGATTCGACGCGAGATTGCCAACAGCAACGAGCGGAGGCGCATGCAGAGTATCAACGCGGGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005862.9 ENSMUST00000229956.2 |
||
| CDS CAA 72 bp | TGGGGAATGAGGGTCTTGAGGGACTGGAAGCCCGCGTaGATACTCTGCATGCGCCTCCGCTCGTTGCTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: WGMRVLRDWKPA*ILCMRLRSLLL Trigger: CAACAGCAACGAGCGGAGGCGCATGCAGAGTATCAACGCGGGCTTCCAGTCCCTCAAGACCCTCATTCCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005862.9 ENSMUST00000229956.2 |
||
| CDS CAA 72 bp | GAGTTGATGACTGAGGAGGGACCCATGGTGACAACATaGATGTGGTGGGAGGAAGGCGGGGCTGGTGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: ELMTEEGPMVTT*MWWEEGGAGAG Trigger: GCCTGCACCAGCCCCGCCTTCCTCCCACCACATCAATGTTGTCACCATGGGTCCCTCCTCAGTCATCAACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
||
| CDS CAA 90 bp | CCATCTGTGTGGGGAATGAGGGTCTTGAGGGACTGGAAGCCCGCGTaGATACTCTGCATGCGCCTCCGCTCGTTGCTGTTGGCAATCTCG | + |
|
Preference number: 6 (lower is better) Translates to: PSVWGMRVLRDWKPA*ILCMRLRSLLLAIS Trigger: CGAGATTGCCAACAGCAACGAGCGGAGGCGCATGCAGAGTATCAACGCGGGCTTCCAGTCCCTCAAGACCCTCATTCCCCACACAGATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005862.9 ENSMUST00000229956.2 |
||
| CDS CAA 90 bp | CTGCTCTTCCAGCATCATCCGCACGGAGCGCTCCTTGTCCAGCTGTaGTCGCAGCTCGATCATCTCTCTCCTAAGGTCCTCAGCCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LLFQHHPHGALLVQL*SQLDHLSPKVLSLL Trigger: GAGAAGGCTGAGGACCTTAGGAGAGAGATGATCGAGCTGCGACAACAGCTGGACAAGGAGCGCTCCGTGCGGATGATGCTGGAAGAGCAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005862.9 ENSMUST00000229956.2 ENSMUST00000230875.2 |
||
| CDS CCA 72 bp | TGCTGGGCAATCACCTTGAGTTTTTCCGGGTACATGTaGGCCTCGAGGGAGCGCACCTGCTCTTCCAGCATC | + |
|
Preference number: 6 (lower is better) Translates to: CWAITLSFSGYM*ASRERTCSSSI Trigger: GATGCTGGAAGAGCAGGTGCGCTCCCTCGAGGCCCACATGTACCCGGAAAAACTCAAGGTGATTGCCCAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000005862.9 ENSMUST00000229956.2 ENSMUST00000230875.2 |
||
| CDS CAA 72 bp | CAGCATCATCCGCACGGAGCGCTCCTTGTCCAGCTGTaGTCGCAGCTCGATCATCTCTCTCCTAAGGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: QHHPHGALLVQL*SQLDHLSPKVL Trigger: GAGGACCTTAGGAGAGAGATGATCGAGCTGCGACAACAGCTGGACAAGGAGCGCTCCGTGCGGATGATGCTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005862.9 ENSMUST00000229956.2 ENSMUST00000230875.2 |
||
| CDS CAA 90 bp | GTAGAGACAGAGTTGATGACTGAGGAGGGACCCATGGTGACAACATaGATGTGGTGGGAGGAAGGCGGGGCTGGTGCAGGCACGATCACT | + |
|
Preference number: 6 (lower is better) Translates to: VETELMTEEGPMVTT*MWWEEGGAGAGTIT Trigger: AGTGATCGTGCCTGCACCAGCCCCGCCTTCCTCCCACCACATCAATGTTGTCACCATGGGTCCCTCCTCAGTCATCAACTCTGTCTCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
||
| CDS CAA 72 bp | TTCGGGGATGAGCCACTCAGCTCCTGGATAAAGCGCTaGAGCTGTGTGTTCTGCTGCAGGAGTCTAGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: FGDEPLSSWIKR*SCVFCCRSLVF Trigger: GAAGACTAGACTCCTGCAGCAGAACACACAGCTCAAGCGCTTTATCCAGGAGCTGAGTGGCTCATCCCCGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005862.9 ENSMUST00000229956.2 ENSMUST00000230875.2 |
||
| CDS CAA 90 bp | GCCTGCACAATGGTGTCCAGATTTTGCCGGGATGTAGAGACAGAGTaGATGACTGAGGAGGGACCCATGGTGACAACATTGATGTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: ACTMVSRFCRDVETE*MTEEGPMVTTLMWW Trigger: CCACCACATCAATGTTGTCACCATGGGTCCCTCCTCAGTCATCAACTCTGTCTCTACATCCCGGCAAAATCTGGACACCATTGTGCAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| CDS GCA 72 bp | CTCAGCTCCTGGATAAAGCGCTTGAGCTGTGTGTTCTaGTGCAGGAGTCTAGTCTTCTCCTGTTCAAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: LSSWIKRLSCVF*CRSLVFSCSRE Trigger: CTCTCTTGAACAGGAGAAGACTAGACTCCTGCAGCAGAACACACAGCTCAAGCGCTTTATCCAGGAGCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005862.9 ENSMUST00000229956.2 ENSMUST00000230875.2 |
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| CDS GCA 72 bp | ATGTGCTGGATGGCCTGCACAATGGTGTCCAGATTTTaGCGGGATGTAGAGACAGAGTTGATGACTGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: MCWMACTMVSRF*RDVETELMTEE Trigger: CTCCTCAGTCATCAACTCTGTCTCTACATCCCGGCAAAATCTGGACACCATTGTGCAGGCCATCCAGCACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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| CDS GCA 72 bp | AGCTCCTGGATAAAGCGCTTGAGCTGTGTGTTCTGCTaGAGGAGTCTAGTCTTCTCCTGTTCAAGAGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: SSWIKRLSCVFC*RSLVFSCSREK Trigger: CTTCTCTCTTGAACAGGAGAAGACTAGACTCCTGCAGCAGAACACACAGCTCAAGCGCTTTATCCAGGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005862.9 ENSMUST00000229956.2 ENSMUST00000230875.2 |
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| CDS CAA 72 bp | ATGGTGTCCAGATTTTGCCGGGATGTAGAGACAGAGTaGATGACTGAGGAGGGACCCATGGTGACAACATTG | + |
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Preference number: 6 (lower is better) Translates to: MVSRFCRDVETE*MTEEGPMVTTL Trigger: CAATGTTGTCACCATGGGTCCCTCCTCAGTCATCAACTCTGTCTCTACATCCCGGCAAAATCTGGACACCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005862.9 |
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