Pregenerated sensors for TFAP2E (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042477Ensembl transcript IDs: ENSMUST00000048194.8
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TACCCATGGCTGCCCAGGCATCTCAGTGGGAAGGGCTCTGTCCCCTaGGCCAGACTTTCCCATGCCAGTTCGCGTTACGAGTCCTTACCA | + |
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Preference number: 1 (lower is better) Translates to: YPWLPRHLSGKGSVP*ARLSHASSRYESLP Trigger: TGGTAAGGACTCGTAACGCGAACTGGCATGGGAAAGTCTGGCTCAGGGGACAGAGCCCTTCCCACTGAGATGCCTGGGCAGCCATGGGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| 3UTR GCA 90 bp | AACAGGACTGTGGTAATGCAGCCTAGGTTCAAGTTCAGTAGTTTGTaGTGTACCATCTCGTTCTTCAGGGGTCTCTCCAGCTTCTCGTCT | + |
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Preference number: 1 (lower is better) Translates to: NRTVVMQPRFKFSSL*CTISFFRGLSSFSS Trigger: AGACGAGAAGCTGGAGAGACCCCTGAAGAACGAGATGGTACAGCACAAACTACTGAACTTGAACCTAGGCTGCATTACCACAGTCCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| 3UTR-3UTR CCA 90 bp | GCTTCTCGTCTCCAAGAGCCTGAAGGATCCAAAGAGCCCACTGGACCCTCCTTCCCCACTCTGGGCTTCTaGAAAAATGTTCTCTCTGGC | + |
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Preference number: 2 (lower is better) Translates to: ASRLQEPEGSKEPTGPSFPTLGF*KNVLSG Trigger: GCCAGAGAGAACATTTTTCCAGAAGCCCAGAGTGGG...GAAGGAGGGTCCAGTGGGCTCTTTGGATCCTTCAGGCTCTTGGAGACGAGAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| 3UTR CAA 90 bp | AGCAACAGGACTGTGGTAATGCAGCCTAGGTTCAAGTTCAGTAGTTaGTGCTGTACCATCTCGTTCTTCAGGGGTCTCTCCAGCTTCTCG | + |
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Preference number: 2 (lower is better) Translates to: SNRTVVMQPRFKFSS*CCTISFFRGLSSFS Trigger: CGAGAAGCTGGAGAGACCCCTGAAGAACGAGATGGTACAGCACAAACTACTGAACTTGAACCTAGGCTGCATTACCACAGTCCTGTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| 3UTR TCA 72 bp | CTGCCCAGGCATCTCAGTGGGAAGGGCTCTGTCCCCTaGGCCAGACTTTCCCATGCCAGTTCGCGTTACGAG | + |
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Preference number: 3 (lower is better) Translates to: LPRHLSGKGSVP*ARLSHASSRYE Trigger: CTCGTAACGCGAACTGGCATGGGAAAGTCTGGCTCAGGGGACAGAGCCCTTCCCACTGAGATGCCTGGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| 3UTR GCA 72 bp | CCTCTGATGTGTTATCAGCCTCGGGGTACCCATGGCTaGCCAGGCATCTCAGTGGGAAGGGCTCTGTCCCCT | + |
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Preference number: 3 (lower is better) Translates to: PLMCYQPRGTHG*PGISVGRALSP Trigger: AGGGGACAGAGCCCTTCCCACTGAGATGCCTGGGCAGCCATGGGTACCCCGAGGCTGATAACACATCAGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| 3UTR CCA 72 bp | AGCACCTCTGATGTGTTATCAGCCTCGGGGTACCCATaGCTGCCCAGGCATCTCAGTGGGAAGGGCTCTGTC | + |
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Preference number: 3 (lower is better) Translates to: STSDVLSASGYP*LPRHLSGKGSV Trigger: GACAGAGCCCTTCCCACTGAGATGCCTGGGCAGCCATGGGTACCCCGAGGCTGATAACACATCAGAGGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| 3UTR TCA 72 bp | TTCAGGGGTCTCTCCAGCTTCTCGTCTCCAAGAGCCTaGAGGATCCAAAGAGCCCACTGGACCCTCCTTCTG | + |
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Preference number: 3 (lower is better) Translates to: FRGLSSFSSPRA*RIQRAHWTLLL Trigger: CAGAAGGAGGGTCCAGTGGGCTCTTTGGATCCTTCAGGCTCTTGGAGACGAGAAGCTGGAGAGACCCCTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| 3UTR GCA 72 bp | GTGGTAATGCAGCCTAGGTTCAAGTTCAGTAGTTTGTaGTGTACCATCTCGTTCTTCAGGGGTCTCTCCAGC | + |
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Preference number: 3 (lower is better) Translates to: VVMQPRFKFSSL*CTISFFRGLSS Trigger: GCTGGAGAGACCCCTGAAGAACGAGATGGTACAGCACAAACTACTGAACTTGAACCTAGGCTGCATTACCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS-3UTR GCA 90 bp | GTGTTATCAGCCTCGGGGTACCCATGGCTGCCCAGGCATCTCAGTGGGAAGGGCGTGCCGGGCGGCTGTTaGCCAGTGGAGAGCGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: VLSASGYPWLPRHLSGKGVPGGC*PVESGP Trigger: AGGACCGCTCTCCACTGGGCAACAGCCGCCCGGCAC...GCCCTTCCCACTGAGATGCCTGGGCAGCCATGGGTACCCCGAGGCTGATAACAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS-3UTR TCA 90 bp | GTTCTCTCTGGCCTGAATAGAATCCCACATTTTACCCCCAGGAGCCAAGGCCCCGAGGCGGCGGGAGTGTaGCACAGTGGCGGCGCGGGC | + |
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Preference number: 4 (lower is better) Translates to: VLSGLNRIPHFTPRSQGPEAAGV*HSGGAG Trigger: GCCCGCGCCGCCACTGTGTCACACTCCCGCCGCCTC...GGGGCCTTGGCTCCTGGGGGTAAAATGTGGGATTCTATTCAGGCCAGAGAGAAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS-3UTR GCA 90 bp | GGCTGCCCAGGCATCTCAGTGGGAAGGGCTCTGTCCCCTGAGCCAGACTTTCCCCGAGGGTGGAGAGGCTaGCGGCTTTGGAGGGAATGG | + |
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Preference number: 4 (lower is better) Translates to: GCPGISVGRALSPEPDFPRGWRG*RLWREW Trigger: CCATTCCCTCCAAAGCCGGCAGCCTCTCCACCCTCG...GGGAAAGTCTGGCTCAGGGGACAGAGCCCTTCCCACTGAGATGCCTGGGCAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS-3UTR GCA 90 bp | ATGGCTGCCCAGGCATCTCAGTGGGAAGGGCTCTGTCCCCTGAGCCAGACTTTCGCCTTGCTTTCTCCATaGCCACCTCCGGCGCCGCTT | + |
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Preference number: 4 (lower is better) Translates to: MAAQASQWEGLCPLSQTFALLSP*PPPAPL Trigger: AAGCGGCGCCGGAGGTGGGCATGGAGAAAGCAAGGC...GAAAGTCTGGCTCAGGGGACAGAGCCCTTCCCACTGAGATGCCTGGGCAGCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS-3UTR GCA 90 bp | GTGTTATCAGCCTCGGGGTACCCATGGCTGCCCAGGCATCTCAGTGGGAAGGGCTGGCAGCCAGCAGCATaGTCTTGCGGCTGTGTAGCT | + |
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Preference number: 4 (lower is better) Translates to: VLSASGYPWLPRHLSGKGWQPAA*SCGCVA Trigger: AGCTACACAGCCGCAAGAGCATGCTGCTGGCTGCCA...GCCCTTCCCACTGAGATGCCTGGGCAGCCATGGGTACCCCGAGGCTGATAACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS-3UTR GCA 90 bp | GCTTCTCGTCTCCAAGAGCCTGAAGGATCCAAAGAGCCCACTGGACCCTCCTTCAGGCTCCAGGATGAGTaGCGGGCGGCTGTTGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: ASRLQEPEGSKEPTGPSFRLQDE*RAAVAQ Trigger: CTGGGCAACAGCCGCCCGGCACTCATCCTGGAGCCT...GAAGGAGGGTCCAGTGGGCTCTTTGGATCCTTCAGGCTCTTGGAGACGAGAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS-3UTR TCA 90 bp | GCTGCCCAGGCATCTCAGTGGGAAGGGCTCTGTCCCCTGAGCCAGACTTTCCCAAGTGGAGAGCGGTCCTaGGCCATCAAGTCTGCAAAC | + |
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Preference number: 4 (lower is better) Translates to: AAQASQWEGLCPLSQTFPSGERS*AIKSAN Trigger: GTTTGCAGACTTGATGGCTCAGGACCGCTCTCCACT...TGGGAAAGTCTGGCTCAGGGGACAGAGCCCTTCCCACTGAGATGCCTGGGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS-3UTR GCA 90 bp | GGCAGCAACAGGACTGTGGTAATGCAGCCTAGGTTCAAGTTCAGTAGTTTGTGCCCGTCGGCCAGGCTGTaGAGGAGCCGGGGAACCGCG | + |
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Preference number: 4 (lower is better) Translates to: GSNRTVVMQPRFKFSSLCPSARL*RSRGTA Trigger: CGCGGTTCCCCGGCTCCTGCACAGCCTGGCCGACGG...GCACAAACTACTGAACTTGAACCTAGGCTGCATTACCACAGTCCTGTTGCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS-3UTR CCA 90 bp | GCTTCTCGTCTCCAAGAGCCTGAAGGATCCAAAGAGCCCACTGGACCCTCCTTCGATGATAGTCCGCGGTaGCAGAGGCGGCGGGAGTGT | + |
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Preference number: 4 (lower is better) Translates to: ASRLQEPEGSKEPTGPSFDDSPR*QRRREC Trigger: ACACTCCCGCCGCCTCTGCCACCGCGGACTATCATC...GAAGGAGGGTCCAGTGGGCTCTTTGGATCCTTCAGGCTCTTGGAGACGAGAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS-3UTR TCA 90 bp | TACCCAACTATGTCCCACTCTGGGCTTCTGGAAAAATGTTCTCTCTGGCCTGAACCCCAGGCTCCAGGATaGGTGCCGGGCGGCTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: YPTMSHSGLLEKCSLWPEPQAPG*VPGGCC Trigger: GCAACAGCCGCCCGGCACTCATCCTGGAGCCTGGGG...TTCAGGCCAGAGAGAACATTTTTCCAGAAGCCCAGAGTGGGACATAGTTGGGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS-3UTR TCA 90 bp | GGGTCTCTCCAGCTTCTCGTCTCCAAGAGCCTGAAGGATCCAAAGAGCCCACTGCTTGTACTTGGATGTTaGGCTGAGCAACGACAGCCG | + |
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Preference number: 4 (lower is better) Translates to: GSLQLLVSKSLKDPKSPLLVLGC*AEQRQP Trigger: CGGCTGTCGTTGCTCAGCTCAACATCCAAGTACAAG...CAGTGGGCTCTTTGGATCCTTCAGGCTCTTGGAGACGAGAAGCTGGAGAGACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS-3UTR CCA 90 bp | TCAGGGGTCTCTCCAGCTTCTCGTCTCCAAGAGCCTGAAGGATCCAAAGAGCCCCCTTACAGATCTGCTTaGCAGCCAGCAGCATGCTCT | + |
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Preference number: 4 (lower is better) Translates to: SGVSPASRLQEPEGSKEPPYRSA*QPAACS Trigger: AGAGCATGCTGCTGGCTGCCAAGCAGATCTGTAAGG...GGGCTCTTTGGATCCTTCAGGCTCTTGGAGACGAGAAGCTGGAGAGACCCCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS-3UTR TCA 90 bp | TGCCAGTTCGCGTTACGAGTCCTTACCAGAAACCACAGAAAAGCCTTCTTCTTTGAGGCACTCAGGAGGTaGGAGTCGCCGCTGCACCTC | + |
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Preference number: 4 (lower is better) Translates to: CQFALRVLTRNHRKAFFFEALRR*ESPLHL Trigger: GAGGTGCAGCGGCGACTCTCACCTCCTGAGTGCCTC...AAAGAAGAAGGCTTTTCTGTGGTTTCTGGTAAGGACTCGTAACGCGAACTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS-3UTR GCA 90 bp | CCTTCTTCTTTTACCCAACTATGTCCCACTCTGGGCTTCTGGAAAAATGTTCTCGGTGAGAGTCGCCGCTaGACCTCCCCCACGGTCACC | + |
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Preference number: 4 (lower is better) Translates to: PSSFTQLCPTLGFWKNVLGESRR*TSPTVT Trigger: GGTGACCGTGGGGGAGGTGCAGCGGCGACTCTCACC...GAGAACATTTTTCCAGAAGCCCAGAGTGGGACATAGTTGGGTAAAAGAAGAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS-3UTR TCA 90 bp | GGCTTCTGGAAAAATGTTCTCTCTGGCCTGAATAGAATCCCACATTTTACCCCCCCAGGAGGGAGGCGTTaGGGCACTCAGGAGGTGAGA | + |
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Preference number: 4 (lower is better) Translates to: GFWKNVLSGLNRIPHFTPPGGRR*GTQEVR Trigger: TCTCACCTCCTGAGTGCCTCAACGCCTCCCTCCTGG...GGGGGTAAAATGTGGGATTCTATTCAGGCCAGAGAGAACATTTTTCCAGAAGCC 53% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS-3UTR GCA 90 bp | GAAACCACAGAAAAGCCTTCTTCTTTTACCCAACTATGTCCCACTCTGGGCTTCCCAGCAGCATGCTCTTaGGGCTGTGTAGCTCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: ETTEKPSSFTQLCPTLGFPAACS*GCVAPQ Trigger: CTGGGGAGCTACACAGCCGCAAGAGCATGCTGCTGG...GAAGCCCAGAGTGGGACATAGTTGGGTAAAAGAAGAAGGCTTTTCTGTGGTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS-3UTR TCA 90 bp | TGCCAGTTCGCGTTACGAGTCCTTACCAGAAACCACAGAAAAGCCTTCTTCTTTACTTGGATGTTGAGCTaGGCAACGACAGCCGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: CQFALRVLTRNHRKAFFFTWMLS*ATTAGQ Trigger: CTGGCCGGCTGTCGTTGCTCAGCTCAACATCCAAGT...AAAGAAGAAGGCTTTTCTGTGGTTTCTGGTAAGGACTCGTAACGCGAACTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS-3UTR GCA 90 bp | GAAACCACAGAAAAGCCTTCTTCTTTTACCCAACTATGTCCCACTCTGGGCTTCAAGTCCCGAGCCAGGTaGACAGCTTCTCCTTCCACC | + |
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Preference number: 4 (lower is better) Translates to: ETTEKPSSFTQLCPTLGFKSRAR*TASPST Trigger: GGTGGAAGGAGAAGCTGTGCACCTGGCTCGGGACTT...GAAGCCCAGAGTGGGACATAGTTGGGTAAAAGAAGAAGGCTTTTCTGTGGTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS-3UTR GCA 90 bp | GAGCCTGAAGGATCCAAAGAGCCCACTGGACCCTCCTTCTGGGTTCTGAGACTACTGAGCCATCAAGTCTaGAAACTCCTTACAGATCTG | + |
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Preference number: 4 (lower is better) Translates to: EPEGSKEPTGPSFWVLRLLSHQV*KLLTDL Trigger: CAGATCTGTAAGGAGTTTGCAGACTTGATGGCTCAG...TAGTCTCAGAACCCAGAAGGAGGGTCCAGTGGGCTCTTTGGATCCTTCAGGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS-3UTR TCA 90 bp | AGTTCGCGTTACGAGTCCTTACCAGAAACCACAGAAAAGCCTTCTTCTTTTACCAGTTCTGGAAGGCAGTaGGAGCAGCGCAGATGGCAG | + |
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Preference number: 4 (lower is better) Translates to: SSRYESLPETTEKPSSFTSSGRQ*EQRRWQ Trigger: CTGCCATCTGCGCTGCTCTCACTGCCTTCCAGAACT...GGTAAAAGAAGAAGGCTTTTCTGTGGTTTCTGGTAAGGACTCGTAACGCGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS-3UTR CCA 90 bp | TCTTCTTTTACCCAACTATGTCCCACTCTGGGCTTCTGGAAAAATGTTCTCTCTCAACCAGGCTGTCTTTaGACAGTGCGAGGGTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: SSFTQLCPTLGFWKNVLSQPGCL*TVRGWR Trigger: TCTCCACCCTCGCACTGTCCAAAGACAGCCTGGTTG...AGAGAGAACATTTTTCCAGAAGCCCAGAGTGGGACATAGTTGGGTAAAAGAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS-3UTR CCA 90 bp | CAGAAAAGCCTTCTTCTTTTACCCAACTATGTCCCACTCTGGGCTTCTGGAAAACTTCCGACGACCAGCTaGCAAGTTGAGCCCAATCTT | + |
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Preference number: 4 (lower is better) Translates to: QKSLLLLPNYVPLWASGKLPTTS*QVEPNL Trigger: AAGATTGGGCTCAACTTGCCAGCTGGTCGTCGGAAG...TTTTCCAGAAGCCCAGAGTGGGACATAGTTGGGTAAAAGAAGAAGGCTTTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS-3UTR GCA 90 bp | AGTTCGCGTTACGAGTCCTTACCAGAAACCACAGAAAAGCCTTCTTCTTTTACCAACTCCTTACAGATCTaGTTGGCAGCCAGCAGCATG | + |
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Preference number: 4 (lower is better) Translates to: SSRYESLPETTEKPSSFTNSLQI*LAASSM Trigger: CATGCTGCTGGCTGCCAAGCAGATCTGTAAGGAGTT...GGTAAAAGAAGAAGGCTTTTCTGTGGTTTCTGGTAAGGACTCGTAACGCGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS-3UTR CCA 90 bp | GAAACCACAGAAAAGCCTTCTTCTTTTACCCAACTATGTCCCACTCTGGGCTTCTTCTTGATCACCGATTaGTCCAGGAGGCTCATTCCA | + |
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Preference number: 4 (lower is better) Translates to: ETTEKPSSFTQLCPTLGFFLITD*SRRLIP Trigger: TGGAATGAGCCTCCTGGACCAATCGGTGATCAAGAA...GAAGCCCAGAGTGGGACATAGTTGGGTAAAAGAAGAAGGCTTTTCTGTGGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS GCA 90 bp | GGCTCCGCCAATCCTGGAAGACCGAGGGGAGCATCGGCCAGGCCGTaGGCGCCGTCGGCCAGGCTGTGCAGGAGCCGGGGAACCGCGGCG | + |
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Preference number: 5 (lower is better) Translates to: GSANPGRPRGASARP*APSARLCRSRGTAA Trigger: CGCCGCGGTTCCCCGGCTCCTGCACAGCCTGGCCGACGGCGCGCACGGCCTGGCCGATGCTCCCCTCGGTCTTCCAGGATTGGCGGAGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS CCA 90 bp | AGGATGATAGTCCGCGGTGGCAGAGGCGGCGGGAGTGTGACACAGTaGCGGCGCGGGCCCGTAGGCCGCCTGGGGCAGGGACGACAGGCG | + |
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Preference number: 5 (lower is better) Translates to: RMIVRGGRGGGSVTQ*RRGPVGRLGQGRQA Trigger: CGCCTGTCGTCCCTGCCCCAGGCGGCCTACGGGCCCGCGCCGCCACTGTGTCACACTCCCGCCGCCTCTGCCACCGCGGACTATCATCCT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS CCA 90 bp | CCTGAGGGTAGGGCGGCGGGAAGTAAGGAGGATGATAGTCCGCGGTaGCAGAGGCGGCGGGAGTGTGACACAGTGGCGGCGCGGGCCCGT | + |
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Preference number: 5 (lower is better) Translates to: PEGRAAGSKEDDSPR*QRRRECDTVAARAR Trigger: ACGGGCCCGCGCCGCCACTGTGTCACACTCCCGCCGCCTCTGCCACCGCGGACTATCATCCTCCTTACTTCCCGCCGCCCTACCCTCAGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS CCA 90 bp | ATCTATCGCCTGCAATTCCTCCAGACCGGGCGGCTCCGCCAATCCTaGAAGACCGAGGGGAGCATCGGCCAGGCCGTGCGCGCCGTCGGC | + |
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Preference number: 5 (lower is better) Translates to: IYRLQFLQTGRLRQS*KTEGSIGQAVRAVG Trigger: GCCGACGGCGCGCACGGCCTGGCCGATGCTCCCCTCGGTCTTCCAGGATTGGCGGAGCCGCCCGGTCTGGAGGAATTGCAGGCGATAGAT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS-3UTR CAA 90 bp | GCCTCGGGGTACCCATGGCTGCCCAGGCATCTCAGTGGGAAGGGCTCTGTCCCCCCCAGGAGGGAGGCGTaGAGGCACTCAGGAGGTGAG | + |
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Preference number: 5 (lower is better) Translates to: ASGYPWLPRHLSGKGSVPPRREA*RHSGGE Trigger: CTCACCTCCTGAGTGCCTCAACGCCTCCCTCCTGGG...GGGGACAGAGCCCTTCCCACTGAGATGCCTGGGCAGCCATGGGTACCCCGAGGC 68% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS-3UTR CAA 90 bp | GCCTCGGGGTACCCATGGCTGCCCAGGCATCTCAGTGGGAAGGGCTCTGTCCCCCACCGGCCTCCATTTTaGGACTTGGCCCTTCGGAGG | + |
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Preference number: 5 (lower is better) Translates to: ASGYPWLPRHLSGKGSVPHRPPF*DLALRR Trigger: CCTCCGAAGGGCCAAGTCCAAAAATGGAGGCCGGTG...GGGGACAGAGCCCTTCCCACTGAGATGCCTGGGCAGCCATGGGTACCCCGAGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS GCA 90 bp | GCCAGCAGCATGCTCTTGCGGCTGTGTAGCTCCCCAGGGTCGGCATaGTGTCGGCATAGGTACTCAGCAGCCGCCTTGGCTGGAAACTCA | + |
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Preference number: 5 (lower is better) Translates to: ASSMLLRLCSSPGSA*CRHRYSAAALAGNS Trigger: TGAGTTTCCAGCCAAGGCGGCTGCTGAGTACCTATGCCGACAGCATGCCGACCCTGGGGAGCTACACAGCCGCAAGAGCATGCTGCTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS CCA 90 bp | CAGCGAGGTCAGCAGAGTCACGTTGGCTGCCTTCCGACGACCAGCTaGCAAGTTGAGCCCAATCTTCTCCAGCCGTTCCCGCAGACACCG | + |
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Preference number: 5 (lower is better) Translates to: QRGQQSHVGCLPTTS*QVEPNLLQPFPQTP Trigger: CGGTGTCTGCGGGAACGGCTGGAGAAGATTGGGCTCAACTTGCCAGCTGGTCGTCGGAAGGCAGCCAACGTGACTCTGCTGACCTCGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS TCA 90 bp | TCCAGGATGAGTGCCGGGCGGCTGTTGCCCAGTGGAGAGCGGTCCTaGGCCATCAAGTCTGCAAACTCCTTACAGATCTGCTTGGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: SRMSAGRLLPSGERS*AIKSANSLQICLAA Trigger: GGCTGCCAAGCAGATCTGTAAGGAGTTTGCAGACTTGATGGCTCAGGACCGCTCTCCACTGGGCAACAGCCGCCCGGCACTCATCCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS GCA 90 bp | CACAGCTTCTCCTTCCACCAGCGAGGTCAGCAGAGTCACGTTGGCTaGCTTCCGACGACCAGCTGGCAAGTTGAGCCCAATCTTCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: HSFSFHQRGQQSHVG*LPTTSWQVEPNLLQ Trigger: CTGGAGAAGATTGGGCTCAACTTGCCAGCTGGTCGTCGGAAGGCAGCCAACGTGACTCTGCTGACCTCGCTGGTGGAAGGAGAAGCTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS-3UTR CAA 90 bp | GGCTGCCCAGGCATCTCAGTGGGAAGGGCTCTGTCCCCTGAGCCAGACTTTCCCTTTCTTGATCACCGATaGGTCCAGGAGGCTCATTCC | + |
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Preference number: 5 (lower is better) Translates to: GCPGISVGRALSPEPDFPFLDHR*VQEAHS Trigger: GGAATGAGCCTCCTGGACCAATCGGTGATCAAGAAA...GGGAAAGTCTGGCTCAGGGGACAGAGCCCTTCCCACTGAGATGCCTGGGCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS-3UTR CAA 90 bp | GCTTCTCGTCTCCAAGAGCCTGAAGGATCCAAAGAGCCCACTGGACCCTCCTTCCGACCAGCTGGCAAGTaGAGCCCAATCTTCTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: ASRLQEPEGSKEPTGPSFRPAGK*SPIFSS Trigger: GCTGGAGAAGATTGGGCTCAACTTGCCAGCTGGTCG...GAAGGAGGGTCCAGTGGGCTCTTTGGATCCTTCAGGCTCTTGGAGACGAGAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS-3UTR CAA 90 bp | GGGTCTCTCCAGCTTCTCGTCTCCAAGAGCCTGAAGGATCCAAAGAGCCCACTGTCCTTCTCCGAGGCCTaGCTTTCTCCATGCCCACCT | + |
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Preference number: 5 (lower is better) Translates to: GSLQLLVSKSLKDPKSPLSFSEA*LSPCPP Trigger: AGGTGGGCATGGAGAAAGCAAGGCCTCGGAGAAGGA...CAGTGGGCTCTTTGGATCCTTCAGGCTCTTGGAGACGAGAAGCTGGAGAGACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS TCA 90 bp | TGGAAGGCAGTGAGAGCAGCGCAGATGGCAGGCCCTCCAAAGCCATaGGTGATGAGACTAAAATGTGTCAGACAGCTCTGCACCCCAGGC | + |
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Preference number: 5 (lower is better) Translates to: WKAVRAAQMAGPPKP*VMRLKCVRQLCTPG Trigger: GCCTGGGGTGCAGAGCTGTCTGACACATTTTAGTCTCATCACTCATGGCTTTGGAGGGCCTGCCATCTGCGCTGCTCTCACTGCCTTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS-3UTR CAA 90 bp | GTTCTCTCTGGCCTGAATAGAATCCCACATTTTACCCCCAGGAGCCAAGGCCCCCCTCCATTTTTGGACTaGGCCCTTCGGAGGACACCC | + |
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Preference number: 5 (lower is better) Translates to: VLSGLNRIPHFTPRSQGPPPFLD*ALRRTP Trigger: GGGTGTCCTCCGAAGGGCCAAGTCCAAAAATGGAGG...GGGGCCTTGGCTCCTGGGGGTAAAATGTGGGATTCTATTCAGGCCAGAGAGAAC 57% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS-3UTR CAA 90 bp | TTTACCCCCAGGAGCCAAGGCCCCATCTCAGGCTCTGGGAGTCATTTAGCTAGGTACTCAGCAGCCGCCTaGGCTGGAAACTCAGTCTCA | + |
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Preference number: 5 (lower is better) Translates to: FTPRSQGPISGSGSHLARYSAAA*AGNSVS Trigger: TGAGACTGAGTTTCCAGCCAAGGCGGCTGCTGAGTA...CCTAGCTAAATGACTCCCAGAGCCTGAGATGGGGCCTTGGCTCCTGGGGGTAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS-3UTR CAA 90 bp | CCACAGAAAAGCCTTCTTCTTTTACCCAACTATGTCCCACTCTGGGCTTCTGGAGCCAGCAGCATGCTCTaGCGGCTGTGTAGCTCCCCA | + |
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Preference number: 5 (lower is better) Translates to: PQKSLLLLPNYVPLWASGASSML*RLCSSP Trigger: TGGGGAGCTACACAGCCGCAAGAGCATGCTGCTGGC...TCCAGAAGCCCAGAGTGGGACATAGTTGGGTAAAAGAAGAAGGCTTTTCTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS-3UTR CAA 90 bp | TACCCAACTATGTCCCACTCTGGGCTTCTGGAAAAATGTTCTCTCTGGCCTGAAGAGAGGCTGCCGGCTTaGGAGGGAATGGGGACTTTC | + |
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Preference number: 5 (lower is better) Translates to: YPTMSHSGLLEKCSLWPEERLPA*EGMGTF Trigger: GAAAGTCCCCATTCCCTCCAAAGCCGGCAGCCTCTC...TTCAGGCCAGAGAGAACATTTTTCCAGAAGCCCAGAGTGGGACATAGTTGGGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS-3UTR CAA 90 bp | TCTTCTTTTACCCAACTATGTCCCACTCTGGGCTTCTGGAAAAATGTTCTCTCTTCCTTACAGATCTGCTaGGCAGCCAGCAGCATGCTC | + |
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Preference number: 5 (lower is better) Translates to: SSFTQLCPTLGFWKNVLSSLQIC*AASSML Trigger: GAGCATGCTGCTGGCTGCCAAGCAGATCTGTAAGGA...AGAGAGAACATTTTTCCAGAAGCCCAGAGTGGGACATAGTTGGGTAAAAGAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS-3UTR CAA 90 bp | TACGAGTCCTTACCAGAAACCACAGAAAAGCCTTCTTCTTTTACCCAACTATGTACGGTCACCTTGTACTaGGATGTTGAGCTGAGCAAC | + |
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Preference number: 5 (lower is better) Translates to: YESLPETTEKPSSFTQLCTVTLY*DVELSN Trigger: GTTGCTCAGCTCAACATCCAAGTACAAGGTGACCGT...ACATAGTTGGGTAAAAGAAGAAGGCTTTTCTGTGGTTTCTGGTAAGGACTCGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS GCA 72 bp | CTGGGGCAGGGACGACAGGCGGGTCCCGCCAGCCGCTaGGCCCAGCCCGTCGGGGCGCTCCATGGCGGAGTA | + |
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Preference number: 6 (lower is better) Translates to: LGQGRQAGPASR*AQPVGALHGGV Trigger: TACTCCGCCATGGAGCGCCCCGACGGGCTGGGCGCAGCGGCTGGCGGGACCCGCCTGTCGTCCCTGCCCCAG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS CCA 72 bp | GTCCGCGGTGGCAGAGGCGGCGGGAGTGTGACACAGTaGCGGCGCGGGCCCGTAGGCCGCCTGGGGCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: VRGGRGGGSVTQ*RRGPVGRLGQG Trigger: TCCCTGCCCCAGGCGGCCTACGGGCCCGCGCCGCCACTGTGTCACACTCCCGCCGCCTCTGCCACCGCGGAC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS CCA 72 bp | CTGCAATTCCTCCAGACCGGGCGGCTCCGCCAATCCTaGAAGACCGAGGGGAGCATCGGCCAGGCCGTGCGC | + |
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Preference number: 6 (lower is better) Translates to: LQFLQTGRLRQS*KTEGSIGQAVR Trigger: GCGCACGGCCTGGCCGATGCTCCCCTCGGTCTTCCAGGATTGGCGGAGCCGCCCGGTCTGGAGGAATTGCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS CCA 72 bp | AGGGCGGCGGGAAGTAAGGAGGATGATAGTCCGCGGTaGCAGAGGCGGCGGGAGTGTGACACAGTGGCGGCG | + |
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Preference number: 6 (lower is better) Translates to: RAAGSKEDDSPR*QRRRECDTVAA Trigger: CGCCGCCACTGTGTCACACTCCCGCCGCCTCTGCCACCGCGGACTATCATCCTCCTTACTTCCCGCCGCCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS GCA 72 bp | ATGCTCTTGCGGCTGTGTAGCTCCCCAGGGTCGGCATaGTGTCGGCATAGGTACTCAGCAGCCGCCTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: MLLRLCSSPGSA*CRHRYSAAALA Trigger: AGCCAAGGCGGCTGCTGAGTACCTATGCCGACAGCATGCCGACCCTGGGGAGCTACACAGCCGCAAGAGCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS TCA 72 bp | TCACGTTGGCTGCCTTCCGACGACCAGCTGGCAAGTTaGGCCCAATCTTCTCCAGCCGTTCCCGCAGACACC | + |
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Preference number: 6 (lower is better) Translates to: SRWLPSDDQLAS*AQSSPAVPADT Trigger: GGTGTCTGCGGGAACGGCTGGAGAAGATTGGGCTCAACTTGCCAGCTGGTCGTCGGAAGGCAGCCAACGTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS GCA 72 bp | TGGTCCAGGAGGCTCATTCCAGGGTCATCTATCGCCTaGAATTCCTCCAGACCGGGCGGCTCCGCCAATCCT | + |
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Preference number: 6 (lower is better) Translates to: WSRRLIPGSSIA*NSSRPGGSANP Trigger: AGGATTGGCGGAGCCGCCCGGTCTGGAGGAATTGCAGGCGATAGATGACCCTGGAATGAGCCTCCTGGACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS CCA 72 bp | CAGCAGAGTCACGTTGGCTGCCTTCCGACGACCAGCTaGCAAGTTGAGCCCAATCTTCTCCAGCCGTTCCCG | + |
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Preference number: 6 (lower is better) Translates to: QQSHVGCLPTTS*QVEPNLLQPFP Trigger: CGGGAACGGCTGGAGAAGATTGGGCTCAACTTGCCAGCTGGTCGTCGGAAGGCAGCCAACGTGACTCTGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS CAA 72 bp | TCACTGGGATTGCTGATGCCGCCAACCAGGCTGTCTTaGGACAGTGCGAGGGTGGAGAGGCTGCCGGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: SLGLLMPPTRLS*DSARVERLPAL Trigger: CAAAGCCGGCAGCCTCTCCACCCTCGCACTGTCCAAAGACAGCCTGGTTGGCGGCATCAGCAATCCCAGTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS CAA 72 bp | GCTTCTCCTTCCACCAGCGAGGTCAGCAGAGTCACGTaGGCTGCCTTCCGACGACCAGCTGGCAAGTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: ASPSTSEVSRVT*AAFRRPAGKLS Trigger: GCTCAACTTGCCAGCTGGTCGTCGGAAGGCAGCCAACGTGACTCTGCTGACCTCGCTGGTGGAAGGAGAAGC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS CAA 90 bp | CAGAAGACCTCACTGGGATTGCTGATGCCGCCAACCAGGCTGTCTTaGGACAGTGCGAGGGTGGAGAGGCTGCCGGCTTTGGAGGGAATG | + |
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Preference number: 6 (lower is better) Translates to: QKTSLGLLMPPTRLS*DSARVERLPALEGM Trigger: CATTCCCTCCAAAGCCGGCAGCCTCTCCACCCTCGCACTGTCCAAAGACAGCCTGGTTGGCGGCATCAGCAATCCCAGTGAGGTCTTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS TCA 72 bp | AGTGCCGGGCGGCTGTTGCCCAGTGGAGAGCGGTCCTaGGCCATCAAGTCTGCAAACTCCTTACAGATCTGC | + |
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Preference number: 6 (lower is better) Translates to: SAGRLLPSGERS*AIKSANSLQIC Trigger: GCAGATCTGTAAGGAGTTTGCAGACTTGATGGCTCAGGACCGCTCTCCACTGGGCAACAGCCGCCCGGCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS GCA 72 bp | TCCTTCCACCAGCGAGGTCAGCAGAGTCACGTTGGCTaGCTTCCGACGACCAGCTGGCAAGTTGAGCCCAAT | + |
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Preference number: 6 (lower is better) Translates to: SFHQRGQQSHVG*LPTTSWQVEPN Trigger: ATTGGGCTCAACTTGCCAGCTGGTCGTCGGAAGGCAGCCAACGTGACTCTGCTGACCTCGCTGGTGGAAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS CAA 72 bp | TCCTTACAGATCTGCTTGGCAGCCAGCAGCATGCTCTaGCGGCTGTGTAGCTCCCCAGGGTCGGCATGCTGT | + |
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Preference number: 6 (lower is better) Translates to: SLQICLAASSML*RLCSSPGSACC Trigger: ACAGCATGCCGACCCTGGGGAGCTACACAGCCGCAAGAGCATGCTGCTGGCTGCCAAGCAGATCTGTAAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS CAA 90 bp | AGGTGCACAGCTTCTCCTTCCACCAGCGAGGTCAGCAGAGTCACGTaGGCTGCCTTCCGACGACCAGCTGGCAAGTTGAGCCCAATCTTC | + |
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Preference number: 6 (lower is better) Translates to: RCTASPSTSEVSRVT*AAFRRPAGKLSPIF Trigger: GAAGATTGGGCTCAACTTGCCAGCTGGTCGTCGGAAGGCAGCCAACGTGACTCTGCTGACCTCGCTGGTGGAAGGAGAAGCTGTGCACCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS GCA 72 bp | CAAACTCCTTACAGATCTGCTTGGCAGCCAGCAGCATaGTCTTGCGGCTGTGTAGCTCCCCAGGGTCGGCAT | + |
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Preference number: 6 (lower is better) Translates to: QTPYRSAWQPAA*SCGCVAPQGRH Trigger: ATGCCGACCCTGGGGAGCTACACAGCCGCAAGAGCATGCTGCTGGCTGCCAAGCAGATCTGTAAGGAGTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS TCA 72 bp | GTGAGAGCAGCGCAGATGGCAGGCCCTCCAAAGCCATaGGTGATGAGACTAAAATGTGTCAGACAGCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: VRAAQMAGPPKP*VMRLKCVRQLC Trigger: GCAGAGCTGTCTGACACATTTTAGTCTCATCACTCATGGCTTTGGAGGGCCTGCCATCTGCGCTGCTCTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS CCA 72 bp | GCTTTGGAGGGAATGGGGACTTTCTTGATCACCGATTaGTCCAGGAGGCTCATTCCAGGGTCATCTATCGCC | + |
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Preference number: 6 (lower is better) Translates to: ALEGMGTFLITD*SRRLIPGSSIA Trigger: GGCGATAGATGACCCTGGAATGAGCCTCCTGGACCAATCGGTGATCAAGAAAGTCCCCATTCCCTCCAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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| CDS CAA 72 bp | GGCTTTGGAGGGAATGGGGACTTTCTTGATCACCGATaGGTCCAGGAGGCTCATTCCAGGGTCATCTATCGC | + |
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Preference number: 6 (lower is better) Translates to: GFGGNGDFLDHR*VQEAHSRVIYR Trigger: GCGATAGATGACCCTGGAATGAGCCTCCTGGACCAATCGGTGATCAAGAAAGTCCCCATTCCCTCCAAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048194.8 |
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