Pregenerated sensors for TFAP2C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028640Ensembl transcript IDs: ENSMUST00000030391.9, ENSMUST00000099058.10, ENSMUST00000170744.2
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGGGCGGGCGGGTTGTAACTGCTTCCCTGCTGCTGCTGCTGCTCTaGACACTTCCCGGGCTGCCCCAGTGGAGGGGCCTGGGTCCTCTC | + |
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Preference number: 1 (lower is better) Translates to: VGGRVVTASLLLLLL*TLPGLPQWRGLGPL Trigger: GAGAGGACCCAGGCCCCTCCACTGGGGCAGCCCGGGAAGTGTCCAGAGCAGCAGCAGCAGCAGGGAAGCAGTTACAACCCGCCCGCCCAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| 3UTR GCA 90 bp | CAAGAGGGCAGGTCCAGAGTGCGGTGTGGGCGGGCGGGTTGTAACTaGTTCCCTGCTGCTGCTGCTGCTCTGGACACTTCCCGGGCTGCC | + |
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Preference number: 1 (lower is better) Translates to: QEGRSRVRCGRAGCN*FPAAAAALDTSRAA Trigger: GGCAGCCCGGGAAGTGTCCAGAGCAGCAGCAGCAGCAGGGAAGCAGTTACAACCCGCCCGCCCACACCGCACTCTGGACCTGCCCTCTTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| 3UTR CCA 90 bp | AAGAACCAAACCAAGTGGCTTCAGGATAGCATGTCCAGGGTTAAATaGAAAAGTCACAAAGACTCCAAGAGGGCAGGTCCAGAGTGCGGT | + |
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Preference number: 1 (lower is better) Translates to: KNQTKWLQDSMSRVK*KSHKDSKRAGPECG Trigger: ACCGCACTCTGGACCTGCCCTCTTGGAGTCTTTGTGACTTTTCCATTTAACCCTGGACATGCTATCCTGAAGCCACTTGGTTTGGTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| 3UTR TCA 90 bp | ATGAGATGCCTATTGCTTCCTAAACAGCTCCAATCAAATAATACTTaGCCAGCCAAGAGAGAAAAGCCCAGCTTCATCTTCAGTTTCAAT | + |
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Preference number: 1 (lower is better) Translates to: MRCLLLPKQLQSNNT*PAKREKPSFIFSFN Trigger: ATTGAAACTGAAGATGAAGCTGGGCTTTTCTCTCTTGGCTGGTCAAGTATTATTTGATTGGAGCTGTTTAGGAAGCAATAGGCATCTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| 3UTR TCA 90 bp | AAAGCCAGCTATTATCTTAACACTGAAAAAGAAATAAGTTATGATTaGTCGATCCCTTTATCTGACGACTCCCATGCACCTGCTGTGTTA | + |
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Preference number: 1 (lower is better) Translates to: KASYYLNTEKEISYD*SIPLSDDSHAPAVL Trigger: TAACACAGCAGGTGCATGGGAGTCGTCAGATAAAGGGATCGATCAATCATAACTTATTTCTTTTTCAGTGTTAAGATAATAGCTGGCTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGCACGGACAGGCTTAGAGGTCCAGTCCCAATCCACACGTCACCCACACAAACTGCTGCTGCTGCTCTaGACACTTCCCGGGCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: GARTGLEVQSQSTRHPHKLLLLL*TLPGLP Trigger: GGGCAGCCCGGGAAGTGTCCAGAGCAGCAGCAGCAG...TTTGTGTGGGTGACGTGTGGATTGGGACTGGACCTCTAAGCCTGTCCGTGCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| 3UTR-3UTR GCA 90 bp | AATCTGTACACTCAACAGTTTCTCAGCACGGAGCCTCCTCGGGGACTTAGGGATGGACACTTCCCGGGCTaGCCCAGTGGAGGGGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: NLYTQQFLSTEPPRGLRDGHFPG*PSGGAW Trigger: CCAGGCCCCTCCACTGGGGCAGCCCGGGAAGTGTCC...ATCCCTAAGTCCCCGAGGAGGCTCCGTGCTGAGAAACTGTTGAGTGTACAGATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| 3UTR-3UTR GCA 90 bp | AATCTGTACACTCAACAGTTTCTCAGCACGGAGCCTCCTCGGGGACTTAGGGATAGGGCAGGTCCAGAGTaGGGTGTGGGCGGGCGGGTT | + |
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Preference number: 2 (lower is better) Translates to: NLYTQQFLSTEPPRGLRDRAGPE*GVGGRV Trigger: AACCCGCCCGCCCACACCGCACTCTGGACCTGCCCT...ATCCCTAAGTCCCCGAGGAGGCTCCGTGCTGAGAAACTGTTGAGTGTACAGATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGCACGGACAGGCTTAGAGGTCCAGTCCCAATCCACACGTCACCCACACAAATGGGTCCTCTCCTTCTaGTCTCTGGCCTCCTTGCAG | + |
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Preference number: 2 (lower is better) Translates to: GARTGLEVQSQSTRHPHKWVLSF*SLASLQ Trigger: CTGCAAGGAGGCCAGAGAGCAGAAGGAGAGGACCCA...TTTGTGTGGGTGACGTGTGGATTGGGACTGGACCTCTAAGCCTGTCCGTGCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| 3UTR-3UTR GCA 90 bp | GACCAGCCAAGAGAGAAAAGCCCAGCTTCATCTTCAGTTTCAATACCCTGTGTGGGACACTTCCCGGGCTaGCCCAGTGGAGGGGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: DQPREKSPASSSVSIPCVGHFPG*PSGGAW Trigger: CCAGGCCCCTCCACTGGGGCAGCCCGGGAAGTGTCC...CACACAGGGTATTGAAACTGAAGATGAAGCTGGGCTTTTCTCTCTTGGCTGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| 3UTR-3UTR GCA 90 bp | ATCTCTGACTTCTGCCTCCTACCAGAAGGTGTGATTGACAAGGTGGTGGGGAAAAGGGCAGGTCCAGAGTaGGGTGTGGGCGGGCGGGTT | + |
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Preference number: 2 (lower is better) Translates to: ISDFCLLPEGVIDKVVGKRAGPE*GVGGRV Trigger: AACCCGCCCGCCCACACCGCACTCTGGACCTGCCCT...TTTCCCCACCACCTTGTCAATCACACCTTCTGGTAGGAGGCAGAAGTCAGAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| 3UTR-3UTR CCA 90 bp | AATCTGTACACTCAACAGTTTCTCAGCACGGAGCCTCCTCGGGGACTTAGGGATCCCAGTGGAGGGGCCTaGGTCCTCTCCTTCTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: NLYTQQFLSTEPPRGLRDPSGGA*VLSFCS Trigger: AGAGCAGAAGGAGAGGACCCAGGCCCCTCCACTGGG...ATCCCTAAGTCCCCGAGGAGGCTCCGTGCTGAGAAACTGTTGAGTGTACAGATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| 3UTR-3UTR GCA 90 bp | AGTTTCTTGTCTGCCCAGGGAGTTCTTACAAAGGGTTCTAAAACTCGTAGCACCAGGGCAGGTCCAGAGTaGGGTGTGGGCGGGCGGGTT | + |
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Preference number: 2 (lower is better) Translates to: SFLSAQGVLTKGSKTRSTRAGPE*GVGGRV Trigger: AACCCGCCCGCCCACACCGCACTCTGGACCTGCCCT...GGTGCTACGAGTTTTAGAACCCTTTGTAAGAACTCCCTGGGCAGACAAGAAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| 3UTR-3UTR GCA 90 bp | ATCTCTGACTTCTGCCTCCTACCAGAAGGTGTGATTGACAAGGTGGTGGGGAAACTTCCCTGCTGCTGCTaGTGCTCTGGACACTTCCCG | + |
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Preference number: 2 (lower is better) Translates to: ISDFCLLPEGVIDKVVGKLPCCC*CSGHFP Trigger: CGGGAAGTGTCCAGAGCAGCAGCAGCAGCAGGGAAG...TTTCCCCACCACCTTGTCAATCACACCTTCTGGTAGGAGGCAGAAGTCAGAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| 3UTR-3UTR GCA 90 bp | CCCACACAAACTAAACTCCATTCTCTTCCGGTTCAGCCCGCAGAAATGAGATGCCTTCCCTGCTGCTGCTaGTGCTCTGGACACTTCCCG | + |
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Preference number: 2 (lower is better) Translates to: PTQTKLHSLPVQPAEMRCLPCCC*CSGHFP Trigger: CGGGAAGTGTCCAGAGCAGCAGCAGCAGCAGGGAAG...GCATCTCATTTCTGCGGGCTGAACCGGAAGAGAATGGAGTTTAGTTTGTGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| 3UTR-3UTR GCA 90 bp | AATCTGTACACTCAACAGTTTCTCAGCACGGAGCCTCCTCGGGGACTTAGGGATCTGCTTCCCTGCTGCTaGTGCTGCTCTGGACACTTC | + |
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Preference number: 2 (lower is better) Translates to: NLYTQQFLSTEPPRGLRDLLPCC*CCSGHF Trigger: GAAGTGTCCAGAGCAGCAGCAGCAGCAGGGAAGCAG...ATCCCTAAGTCCCCGAGGAGGCTCCGTGCTGAGAAACTGTTGAGTGTACAGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGCACGGACAGGCTTAGAGGTCCAGTCCCAATCCACACGTCACCCACACAAAAGCATCTCTGACTTCTaGCTCCTACCAGAAGGTGTG | + |
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Preference number: 2 (lower is better) Translates to: GARTGLEVQSQSTRHPHKSISDF*LLPEGV Trigger: CACACCTTCTGGTAGGAGGCAGAAGTCAGAGATGCT...TTTGTGTGGGTGACGTGTGGATTGGGACTGGACCTCTAAGCCTGTCCGTGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| 3UTR-3UTR CCA 90 bp | AGTTTCTTGTCTGCCCAGGGAGTTCTTACAAAGGGTTCTAAAACTCGTAGCACCCTGCTGCTGCTGCTCTaGACACTTCCCGGGCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: SFLSAQGVLTKGSKTRSTLLLLL*TLPGLP Trigger: GGGCAGCCCGGGAAGTGTCCAGAGCAGCAGCAGCAG...GGTGCTACGAGTTTTAGAACCCTTTGTAAGAACTCCCTGGGCAGACAAGAAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| 3UTR-3UTR CCA 90 bp | ATCACACACAACAATTATTTAAGGAGCACGGACAGGCTTAGAGGTCCAGTCCCACTGCTGCTGCTGCTCTaGACACTTCCCGGGCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: ITHNNYLRSTDRLRGPVPLLLLL*TLPGLP Trigger: GGGCAGCCCGGGAAGTGTCCAGAGCAGCAGCAGCAG...TGGGACTGGACCTCTAAGCCTGTCCGTGCTCCTTAAATAATTGTTGTGTGTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| 3UTR-3UTR GCA 90 bp | CCCACACAAACTAAACTCCATTCTCTTCCGGTTCAGCCCGCAGAAATGAGATGCTGGGTCCTCTCCTTCTaGTCTCTGGCCTCCTTGCAG | + |
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Preference number: 2 (lower is better) Translates to: PTQTKLHSLPVQPAEMRCWVLSF*SLASLQ Trigger: CTGCAAGGAGGCCAGAGAGCAGAAGGAGAGGACCCA...GCATCTCATTTCTGCGGGCTGAACCGGAAGAGAATGGAGTTTAGTTTGTGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| 3UTR-3UTR GCA 90 bp | ATCTCTGACTTCTGCCTCCTACCAGAAGGTGTGATTGACAAGGTGGTGGGGAAATGGGTCCTCTCCTTCTaGTCTCTGGCCTCCTTGCAG | + |
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Preference number: 2 (lower is better) Translates to: ISDFCLLPEGVIDKVVGKWVLSF*SLASLQ Trigger: CTGCAAGGAGGCCAGAGAGCAGAAGGAGAGGACCCA...TTTCCCCACCACCTTGTCAATCACACCTTCTGGTAGGAGGCAGAAGTCAGAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| 3UTR-3UTR GCA 90 bp | ATCTCTGACTTCTGCCTCCTACCAGAAGGTGTGATTGACAAGGTGGTGGGGAAACTGCTTCCCTGCTGCTaGTGCTGCTCTGGACACTTC | + |
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Preference number: 2 (lower is better) Translates to: ISDFCLLPEGVIDKVVGKLLPCC*CCSGHF Trigger: GAAGTGTCCAGAGCAGCAGCAGCAGCAGGGAAGCAG...TTTCCCCACCACCTTGTCAATCACACCTTCTGGTAGGAGGCAGAAGTCAGAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| 3UTR-3UTR CCA 90 bp | AGTTTCTTGTCTGCCCAGGGAGTTCTTACAAAGGGTTCTAAAACTCGTAGCACCCCCAGTGGAGGGGCCTaGGTCCTCTCCTTCTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: SFLSAQGVLTKGSKTRSTPSGGA*VLSFCS Trigger: AGAGCAGAAGGAGAGGACCCAGGCCCCTCCACTGGG...GGTGCTACGAGTTTTAGAACCCTTTGTAAGAACTCCCTGGGCAGACAAGAAACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGCACGGACAGGCTTAGAGGTCCAGTCCCAATCCACACGTCACCCACACAAAGTGGAGTTTCTTGTCTaGCCAGGGAGTTCTTACAAA | + |
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Preference number: 2 (lower is better) Translates to: GARTGLEVQSQSTRHPHKVEFLV*PGSSYK Trigger: TTTGTAAGAACTCCCTGGGCAGACAAGAAACTCCAC...TTTGTGTGGGTGACGTGTGGATTGGGACTGGACCTCTAAGCCTGTCCGTGCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| 3UTR-3UTR TCA 90 bp | AATCTGTACACTCAACAGTTTCTCAGCACGGAGCCTCCTCGGGGACTTAGGGATACCAGAAGGTGTGATTaGCAAGGTGGTGGGGAAAAC | + |
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Preference number: 2 (lower is better) Translates to: NLYTQQFLSTEPPRGLRDTRRCD*QGGGEN Trigger: GTTTTCCCCACCACCTTGTCAATCACACCTTCTGGT...ATCCCTAAGTCCCCGAGGAGGCTCCGTGCTGAGAAACTGTTGAGTGTACAGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| 3UTR-3UTR TCA 90 bp | CCCACACAAACTAAACTCCATTCTCTTCCGGTTCAGCCCGCAGAAATGAGATGCGCTAGAGGGGCTACATaGCCCACCACCATTAAAAGG | + |
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Preference number: 2 (lower is better) Translates to: PTQTKLHSLPVQPAEMRCARGAT*PTTIKR Trigger: CCTTTTAATGGTGGTGGGTCATGTAGCCCCTCTAGC...GCATCTCATTTCTGCGGGCTGAACCGGAAGAGAATGGAGTTTAGTTTGTGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| 3UTR-3UTR TCA 90 bp | CCCACACAAACTAAACTCCATTCTCTTCCGGTTCAGCCCGCAGAAATGAGATGCACCAGAAGGTGTGATTaGCAAGGTGGTGGGGAAAAC | + |
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Preference number: 2 (lower is better) Translates to: PTQTKLHSLPVQPAEMRCTRRCD*QGGGEN Trigger: GTTTTCCCCACCACCTTGTCAATCACACCTTCTGGT...GCATCTCATTTCTGCGGGCTGAACCGGAAGAGAATGGAGTTTAGTTTGTGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| 3UTR-3UTR TCA 90 bp | GACCAGCCAAGAGAGAAAAGCCCAGCTTCATCTTCAGTTTCAATACCCTGTGTGACCAGAAGGTGTGATTaGCAAGGTGGTGGGGAAAAC | + |
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Preference number: 2 (lower is better) Translates to: DQPREKSPASSSVSIPCVTRRCD*QGGGEN Trigger: GTTTTCCCCACCACCTTGTCAATCACACCTTCTGGT...CACACAGGGTATTGAAACTGAAGATGAAGCTGGGCTTTTCTCTCTTGGCTGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| 3UTR-3UTR GCA 90 bp | AATCTGTACACTCAACAGTTTCTCAGCACGGAGCCTCCTCGGGGACTTAGGGATGTGGAGTTTCTTGTCTaGCCAGGGAGTTCTTACAAA | + |
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Preference number: 2 (lower is better) Translates to: NLYTQQFLSTEPPRGLRDVEFLV*PGSSYK Trigger: TTTGTAAGAACTCCCTGGGCAGACAAGAAACTCCAC...ATCCCTAAGTCCCCGAGGAGGCTCCGTGCTGAGAAACTGTTGAGTGTACAGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| 3UTR-3UTR GCA 90 bp | GACCAGCCAAGAGAGAAAAGCCCAGCTTCATCTTCAGTTTCAATACCCTGTGTGAGCATCTCTGACTTCTaGCTCCTACCAGAAGGTGTG | + |
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Preference number: 2 (lower is better) Translates to: DQPREKSPASSSVSIPCVSISDF*LLPEGV Trigger: CACACCTTCTGGTAGGAGGCAGAAGTCAGAGATGCT...CACACAGGGTATTGAAACTGAAGATGAAGCTGGGCTTTTCTCTCTTGGCTGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| 3UTR-3UTR GCA 90 bp | CCCACACAAACTAAACTCCATTCTCTTCCGGTTCAGCCCGCAGAAATGAGATGCGTGGAGTTTCTTGTCTaGCCAGGGAGTTCTTACAAA | + |
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Preference number: 2 (lower is better) Translates to: PTQTKLHSLPVQPAEMRCVEFLV*PGSSYK Trigger: TTTGTAAGAACTCCCTGGGCAGACAAGAAACTCCAC...GCATCTCATTTCTGCGGGCTGAACCGGAAGAGAATGGAGTTTAGTTTGTGTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| 3UTR-3UTR CCA 90 bp | AATCTGTACACTCAACAGTTTCTCAGCACGGAGCCTCCTCGGGGACTTAGGGATATGTCCAGGGTTAAATaGAAAAGTCACAAAGACTCC | + |
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Preference number: 2 (lower is better) Translates to: NLYTQQFLSTEPPRGLRDMSRVK*KSHKDS Trigger: GGAGTCTTTGTGACTTTTCCATTTAACCCTGGACAT...ATCCCTAAGTCCCCGAGGAGGCTCCGTGCTGAGAAACTGTTGAGTGTACAGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| 3UTR-3UTR CCA 90 bp | GACCAGCCAAGAGAGAAAAGCCCAGCTTCATCTTCAGTTTCAATACCCTGTGTGAAGAACCAAACCAAGTaGCTTCAGGATAGCATGTCC | + |
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Preference number: 2 (lower is better) Translates to: DQPREKSPASSSVSIPCVKNQTK*LQDSMS Trigger: GGACATGCTATCCTGAAGCCACTTGGTTTGGTTCTT...CACACAGGGTATTGAAACTGAAGATGAAGCTGGGCTTTTCTCTCTTGGCTGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| 3UTR-3UTR CCA 90 bp | CCCACACAAACTAAACTCCATTCTCTTCCGGTTCAGCCCGCAGAAATGAGATGCATGTCCAGGGTTAAATaGAAAAGTCACAAAGACTCC | + |
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Preference number: 2 (lower is better) Translates to: PTQTKLHSLPVQPAEMRCMSRVK*KSHKDS Trigger: GGAGTCTTTGTGACTTTTCCATTTAACCCTGGACAT...GCATCTCATTTCTGCGGGCTGAACCGGAAGAGAATGGAGTTTAGTTTGTGTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| 3UTR-3UTR CCA 90 bp | ATCACACACAACAATTATTTAAGGAGCACGGACAGGCTTAGAGGTCCAGTCCCAATGTCCAGGGTTAAATaGAAAAGTCACAAAGACTCC | + |
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Preference number: 2 (lower is better) Translates to: ITHNNYLRSTDRLRGPVPMSRVK*KSHKDS Trigger: GGAGTCTTTGTGACTTTTCCATTTAACCCTGGACAT...TGGGACTGGACCTCTAAGCCTGTCCGTGCTCCTTAAATAATTGTTGTGTGTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| 3UTR CCA 72 bp | CGGGTTGTAACTGCTTCCCTGCTGCTGCTGCTGCTCTaGACACTTCCCGGGCTGCCCCAGTGGAGGGGCCTG | + |
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Preference number: 3 (lower is better) Translates to: RVVTASLLLLLL*TLPGLPQWRGL Trigger: CAGGCCCCTCCACTGGGGCAGCCCGGGAAGTGTCCAGAGCAGCAGCAGCAGCAGGGAAGCAGTTACAACCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| 3UTR CCA 72 bp | ACCAAGTGGCTTCAGGATAGCATGTCCAGGGTTAAATaGAAAAGTCACAAAGACTCCAAGAGGGCAGGTCCA | + |
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Preference number: 3 (lower is better) Translates to: TKWLQDSMSRVK*KSHKDSKRAGP Trigger: TGGACCTGCCCTCTTGGAGTCTTTGTGACTTTTCCATTTAACCCTGGACATGCTATCCTGAAGCCACTTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| 3UTR TCA 72 bp | CTAAACTCCATTCTCTTCCGGTTCAGCCCGCAGAAATaGGATGCCTATTGCTTCCTAAACAGCTCCAATCAA | + |
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Preference number: 3 (lower is better) Translates to: LNSILFRFSPQK*DAYCFLNSSNQ Trigger: TTGATTGGAGCTGTTTAGGAAGCAATAGGCATCTCATTTCTGCGGGCTGAACCGGAAGAGAATGGAGTTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| 3UTR TCA 72 bp | CTATTGCTTCCTAAACAGCTCCAATCAAATAATACTTaGCCAGCCAAGAGAGAAAAGCCCAGCTTCATCTTC | + |
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Preference number: 3 (lower is better) Translates to: LLLPKQLQSNNT*PAKREKPSFIF Trigger: GAAGATGAAGCTGGGCTTTTCTCTCTTGGCTGGTCAAGTATTATTTGATTGGAGCTGTTTAGGAAGCAATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| 3UTR TCA 72 bp | TATTATCTTAACACTGAAAAAGAAATAAGTTATGATTaGTCGATCCCTTTATCTGACGACTCCCATGCACCT | + |
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Preference number: 3 (lower is better) Translates to: YYLNTEKEISYD*SIPLSDDSHAP Trigger: AGGTGCATGGGAGTCGTCAGATAAAGGGATCGATCAATCATAACTTATTTCTTTTTCAGTGTTAAGATAATA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| CDS-3UTR CCA 90 bp | GGAGCACGGACAGGCTTAGAGGTCCAGTCCCAATCCACACGTCACCCACACAAACCGGTGGCCGCAGGCTaGTGCAGGGGGTTCATGGCG | + |
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Preference number: 4 (lower is better) Translates to: GARTGLEVQSQSTRHPHKPVAAG*CRGFMA Trigger: CGCCATGAACCCCCTGCACCAGCCTGCGGCCACCGG...TTTGTGTGGGTGACGTGTGGATTGGGACTGGACCTCTAAGCCTGTCCGTGCTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| CDS-3UTR GCA 90 bp | GGAGCACGGACAGGCTTAGAGGTCCAGTCCCAATCCACACGTCACCCACACAAAGCAGAGCGGCTGTGGTaGGAGGCCAGGCTAGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: GARTGLEVQSQSTRHPHKAERLW*EARLEP Trigger: GGGCTCTAGCCTGGCCTCGCACCACAGCCGCTCTGC...TTTGTGTGGGTGACGTGTGGATTGGGACTGGACCTCTAAGCCTGTCCGTGCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| CDS-3UTR TCA 90 bp | GGAGCACGGACAGGCTTAGAGGTCCAGTCCCAATCCACACGTCACCCACACAAAAGGCTAGAGCCCTCCTaGCTCTGTCGACCCGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GARTGLEVQSQSTRHPHKRLEPS*LCRPGQ Trigger: CTGGCCGGGTCGACAGAGTCAGGAGGGCTCTAGCCT...TTTGTGTGGGTGACGTGTGGATTGGGACTGGACCTCTAAGCCTGTCCGTGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR GCA 90 bp | AATCTGTACACTCAACAGTTTCTCAGCACGGAGCCTCCTCGGGGACTTAGGGATCCCGGCCAGGCCTGTTaGTGGCTGCCGGTGGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: NLYTQQFLSTEPPRGLRDPGQAC*WLPVAA Trigger: TGCGGCCACCGGCAGCCAGCAACAGGCCTGGCCGGG...ATCCCTAAGTCCCCGAGGAGGCTCCGTGCTGAGAAACTGTTGAGTGTACAGATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR GCA 90 bp | CCCACACAAACTAAACTCCATTCTCTTCCGGTTCAGCCCGCAGAAATGAGATGCCCCGGCCAGGCCTGTTaGTGGCTGCCGGTGGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: PTQTKLHSLPVQPAEMRCPGQAC*WLPVAA Trigger: TGCGGCCACCGGCAGCCAGCAACAGGCCTGGCCGGG...GCATCTCATTTCTGCGGGCTGAACCGGAAGAGAATGGAGTTTAGTTTGTGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR CCA 90 bp | GGAGCACGGACAGGCTTAGAGGTCCAGTCCCAATCCACACGTCACCCACACAAAGGTGCAGGGGGTTCATaGCGGCAGCGTAAGCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GARTGLEVQSQSTRHPHKGAGGS*RQRKPL Trigger: GAGAGGCTTACGCTGCCGCCATGAACCCCCTGCACC...TTTGTGTGGGTGACGTGTGGATTGGGACTGGACCTCTAAGCCTGTCCGTGCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR CCA 90 bp | CCCACACAAACTAAACTCCATTCTCTTCCGGTTCAGCCCGCAGAAATGAGATGCGTTGCTGGCTGCCGGTaGCCGCAGGCTGGTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PTQTKLHSLPVQPAEMRCVAGCR*PQAGAG Trigger: CCCTGCACCAGCCTGCGGCCACCGGCAGCCAGCAAC...GCATCTCATTTCTGCGGGCTGAACCGGAAGAGAATGGAGTTTAGTTTGTGTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR CCA 90 bp | ATCTCTGACTTCTGCCTCCTACCAGAAGGTGTGATTGACAAGGTGGTGGGGAAAGTTGCTGGCTGCCGGTaGCCGCAGGCTGGTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ISDFCLLPEGVIDKVVGKVAGCR*PQAGAG Trigger: CCCTGCACCAGCCTGCGGCCACCGGCAGCCAGCAAC...TTTCCCCACCACCTTGTCAATCACACCTTCTGGTAGGAGGCAGAAGTCAGAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR CCA 90 bp | GGAGCACGGACAGGCTTAGAGGTCCAGTCCCAATCCACACGTCACCCACACAAAAGACCGCCGCACAGATaGCCTGGCTGCCAAAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GARTGLEVQSQSTRHPHKRPPHR*PGCQSH Trigger: ATGGCTTTGGCAGCCAGGCCATCTGTGCGGCGGTCT...TTTGTGTGGGTGACGTGTGGATTGGGACTGGACCTCTAAGCCTGTCCGTGCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR GCA 90 bp | ATCTCTGACTTCTGCCTCCTACCAGAAGGTGTGATTGACAAGGTGGTGGGGAAAGCAGAGCGGCTGTGGTaGGAGGCCAGGCTAGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ISDFCLLPEGVIDKVVGKAERLW*EARLEP Trigger: GGGCTCTAGCCTGGCCTCGCACCACAGCCGCTCTGC...TTTCCCCACCACCTTGTCAATCACACCTTCTGGTAGGAGGCAGAAGTCAGAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR CCA 90 bp | ATCACACACAACAATTATTTAAGGAGCACGGACAGGCTTAGAGGTCCAGTCCCACCGGTGGCCGCAGGCTaGTGCAGGGGGTTCATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: ITHNNYLRSTDRLRGPVPPVAAG*CRGFMA Trigger: CGCCATGAACCCCCTGCACCAGCCTGCGGCCACCGG...TGGGACTGGACCTCTAAGCCTGTCCGTGCTCCTTAAATAATTGTTGTGTGTGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR CCA 90 bp | ATCACACACAACAATTATTTAAGGAGCACGGACAGGCTTAGAGGTCCAGTCCCAGTTGCTGGCTGCCGGTaGCCGCAGGCTGGTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ITHNNYLRSTDRLRGPVPVAGCR*PQAGAG Trigger: CCCTGCACCAGCCTGCGGCCACCGGCAGCCAGCAAC...TGGGACTGGACCTCTAAGCCTGTCCGTGCTCCTTAAATAATTGTTGTGTGTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR TCA 90 bp | GACCAGCCAAGAGAGAAAAGCCCAGCTTCATCTTCAGTTTCAATACCCTGTGTGCCCGGAGAGGAGAGGTaGGGGATGCGAGGGTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: DQPREKSPASSSVSIPCVPGEER*GMRGLP Trigger: TGGCAACCCTCGCATCCCTCACCTCTCCTCTCCGGG...CACACAGGGTATTGAAACTGAAGATGAAGCTGGGCTTTTCTCTCTTGGCTGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR GCA 90 bp | ATCACACACAACAATTATTTAAGGAGCACGGACAGGCTTAGAGGTCCAGTCCCAGCAGAGCGGCTGTGGTaGGAGGCCAGGCTAGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ITHNNYLRSTDRLRGPVPAERLW*EARLEP Trigger: GGGCTCTAGCCTGGCCTCGCACCACAGCCGCTCTGC...TGGGACTGGACCTCTAAGCCTGTCCGTGCTCCTTAAATAATTGTTGTGTGTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR CCA 90 bp | ATCTCTGACTTCTGCCTCCTACCAGAAGGTGTGATTGACAAGGTGGTGGGGAAAGGTGCAGGGGGTTCATaGCGGCAGCGTAAGCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ISDFCLLPEGVIDKVVGKGAGGS*RQRKPL Trigger: GAGAGGCTTACGCTGCCGCCATGAACCCCCTGCACC...TTTCCCCACCACCTTGTCAATCACACCTTCTGGTAGGAGGCAGAAGTCAGAGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR CCA 90 bp | CCCACACAAACTAAACTCCATTCTCTTCCGGTTCAGCCCGCAGAAATGAGATGCCTTGCAGAGCGGCTGTaGTGCGAGGCCAGGCTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PTQTKLHSLPVQPAEMRCLAERL*CEARLE Trigger: CTCTAGCCTGGCCTCGCACCACAGCCGCTCTGCAAG...GCATCTCATTTCTGCGGGCTGAACCGGAAGAGAATGGAGTTTAGTTTGTGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR CCA 90 bp | ATCTCTGACTTCTGCCTCCTACCAGAAGGTGTGATTGACAAGGTGGTGGGGAAACTTGCAGAGCGGCTGTaGTGCGAGGCCAGGCTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ISDFCLLPEGVIDKVVGKLAERL*CEARLE Trigger: CTCTAGCCTGGCCTCGCACCACAGCCGCTCTGCAAG...TTTCCCCACCACCTTGTCAATCACACCTTCTGGTAGGAGGCAGAAGTCAGAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR CCA 90 bp | AATCTGTACACTCAACAGTTTCTCAGCACGGAGCCTCCTCGGGGACTTAGGGATAGACCGCCGCACAGATaGCCTGGCTGCCAAAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NLYTQQFLSTEPPRGLRDRPPHR*PGCQSH Trigger: ATGGCTTTGGCAGCCAGGCCATCTGTGCGGCGGTCT...ATCCCTAAGTCCCCGAGGAGGCTCCGTGCTGAGAAACTGTTGAGTGTACAGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR TCA 90 bp | AGTTTCTTGTCTGCCCAGGGAGTTCTTACAAAGGGTTCTAAAACTCGTAGCACCCCCGGAGAGGAGAGGTaGGGGATGCGAGGGTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SFLSAQGVLTKGSKTRSTPGEER*GMRGLP Trigger: TGGCAACCCTCGCATCCCTCACCTCTCCTCTCCGGG...GGTGCTACGAGTTTTAGAACCCTTTGTAAGAACTCCCTGGGCAGACAAGAAACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR TCA 90 bp | AGTTTCTTGTCTGCCCAGGGAGTTCTTACAAAGGGTTCTAAAACTCGTAGCACCAGGCTAGAGCCCTCCTaGCTCTGTCGACCCGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SFLSAQGVLTKGSKTRSTRLEPS*LCRPGQ Trigger: CTGGCCGGGTCGACAGAGTCAGGAGGGCTCTAGCCT...GGTGCTACGAGTTTTAGAACCCTTTGTAAGAACTCCCTGGGCAGACAAGAAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR TCA 90 bp | ATCACACACAACAATTATTTAAGGAGCACGGACAGGCTTAGAGGTCCAGTCCCAAGGCTAGAGCCCTCCTaGCTCTGTCGACCCGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ITHNNYLRSTDRLRGPVPRLEPS*LCRPGQ Trigger: CTGGCCGGGTCGACAGAGTCAGGAGGGCTCTAGCCT...TGGGACTGGACCTCTAAGCCTGTCCGTGCTCCTTAAATAATTGTTGTGTGTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR TCA 90 bp | GGAGCACGGACAGGCTTAGAGGTCCAGTCCCAATCCACACGTCACCCACACAAATTGCGAATGACAGTCTaGTCGTGTAGGAGCAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GARTGLEVQSQSTRHPHKLRMTV*SCRSKC Trigger: GCACTTGCTCCTACACGATCAGACTGTCATTCGCAA...TTTGTGTGGGTGACGTGTGGATTGGGACTGGACCTCTAAGCCTGTCCGTGCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR TCA 90 bp | ATCTCTGACTTCTGCCTCCTACCAGAAGGTGTGATTGACAAGGTGGTGGGGAAACCTCACTGGGGTTCATaGCCACTCCCACCAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ISDFCLLPEGVIDKVVGKPHWGS*PLPPGP Trigger: AGGACCTGGTGGGAGTGGTCATGAACCCCAGTGAGG...TTTCCCCACCACCTTGTCAATCACACCTTCTGGTAGGAGGCAGAAGTCAGAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR GCA 90 bp | GGAGCACGGACAGGCTTAGAGGTCCAGTCCCAATCCACACGTCACCCACACAAACACAGATGGCCTGGCTaGCAAAGCCATGAGTTATCA | + |
|
Preference number: 4 (lower is better) Translates to: GARTGLEVQSQSTRHPHKHRWPG*QSHELS Trigger: TGATAACTCATGGCTTTGGCAGCCAGGCCATCTGTG...TTTGTGTGGGTGACGTGTGGATTGGGACTGGACCTCTAAGCCTGTCCGTGCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR CCA 90 bp | GACCAGCCAAGAGAGAAAAGCCCAGCTTCATCTTCAGTTTCAATACCCTGTGTGCTTGCAGAGCGGCTGTaGTGCGAGGCCAGGCTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: DQPREKSPASSSVSIPCVLAERL*CEARLE Trigger: CTCTAGCCTGGCCTCGCACCACAGCCGCTCTGCAAG...CACACAGGGTATTGAAACTGAAGATGAAGCTGGGCTTTTCTCTCTTGGCTGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR TCA 90 bp | GACCAGCCAAGAGAGAAAAGCCCAGCTTCATCTTCAGTTTCAATACCCTGTGTGCCTCACTGGGGTTCATaGCCACTCCCACCAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DQPREKSPASSSVSIPCVPHWGS*PLPPGP Trigger: AGGACCTGGTGGGAGTGGTCATGAACCCCAGTGAGG...CACACAGGGTATTGAAACTGAAGATGAAGCTGGGCTTTTCTCTCTTGGCTGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR GCA 90 bp | GGAGCACGGACAGGCTTAGAGGTCCAGTCCCAATCCACACGTCACCCACACAAACTTGCACACCTGCTGTaGAGCCAACAACATACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GARTGLEVQSQSTRHPHKLAHLL*SQQHTL Trigger: AAGAGTATGTTGTTGGCTGCACAGCAGGTGTGCAAG...TTTGTGTGGGTGACGTGTGGATTGGGACTGGACCTCTAAGCCTGTCCGTGCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR GCA 90 bp | GGAGCACGGACAGGCTTAGAGGTCCAGTCCCAATCCACACGTCACCCACACAAAAACTCCTTGCACACCTaGTGTGCAGCCAACAACATA | + |
|
Preference number: 4 (lower is better) Translates to: GARTGLEVQSQSTRHPHKNSLHT*CAANNI Trigger: TATGTTGTTGGCTGCACAGCAGGTGTGCAAGGAGTT...TTTGTGTGGGTGACGTGTGGATTGGGACTGGACCTCTAAGCCTGTCCGTGCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR CCA 90 bp | ATCACACACAACAATTATTTAAGGAGCACGGACAGGCTTAGAGGTCCAGTCCCAGGTGCAGGGGGTTCATaGCGGCAGCGTAAGCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ITHNNYLRSTDRLRGPVPGAGGS*RQRKPL Trigger: GAGAGGCTTACGCTGCCGCCATGAACCCCCTGCACC...TGGGACTGGACCTCTAAGCCTGTCCGTGCTCCTTAAATAATTGTTGTGTGTGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR TCA 90 bp | ATCACACACAACAATTATTTAAGGAGCACGGACAGGCTTAGAGGTCCAGTCCCACCTCACTGGGGTTCATaGCCACTCCCACCAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ITHNNYLRSTDRLRGPVPPHWGS*PLPPGP Trigger: AGGACCTGGTGGGAGTGGTCATGAACCCCAGTGAGG...TGGGACTGGACCTCTAAGCCTGTCCGTGCTCCTTAAATAATTGTTGTGTGTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR CCA 90 bp | ATCACACACAACAATTATTTAAGGAGCACGGACAGGCTTAGAGGTCCAGTCCCAAGACCGCCGCACAGATaGCCTGGCTGCCAAAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ITHNNYLRSTDRLRGPVPRPPHR*PGCQSH Trigger: ATGGCTTTGGCAGCCAGGCCATCTGTGCGGCGGTCT...TGGGACTGGACCTCTAAGCCTGTCCGTGCTCCTTAAATAATTGTTGTGTGTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR TCA 90 bp | CCCACACAAACTAAACTCCATTCTCTTCCGGTTCAGCCCGCAGAAATGAGATGCTTGCGAATGACAGTCTaGTCGTGTAGGAGCAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PTQTKLHSLPVQPAEMRCLRMTV*SCRSKC Trigger: GCACTTGCTCCTACACGATCAGACTGTCATTCGCAA...GCATCTCATTTCTGCGGGCTGAACCGGAAGAGAATGGAGTTTAGTTTGTGTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR GCA 90 bp | CCCACACAAACTAAACTCCATTCTCTTCCGGTTCAGCCCGCAGAAATGAGATGCCACAGATGGCCTGGCTaGCAAAGCCATGAGTTATCA | + |
|
Preference number: 4 (lower is better) Translates to: PTQTKLHSLPVQPAEMRCHRWPG*QSHELS Trigger: TGATAACTCATGGCTTTGGCAGCCAGGCCATCTGTG...GCATCTCATTTCTGCGGGCTGAACCGGAAGAGAATGGAGTTTAGTTTGTGTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR TCA 90 bp | GACCAGCCAAGAGAGAAAAGCCCAGCTTCATCTTCAGTTTCAATACCCTGTGTGTGGGTCCTTTGCGAATaGCAGTCTGATCGTGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: DQPREKSPASSSVSIPCVWVLCE*QSDRVG Trigger: TCCTACACGATCAGACTGTCATTCGCAAAGGACCCA...CACACAGGGTATTGAAACTGAAGATGAAGCTGGGCTTTTCTCTCTTGGCTGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR GCA 90 bp | CCCACACAAACTAAACTCCATTCTCTTCCGGTTCAGCCCGCAGAAATGAGATGCAACTCCTTGCACACCTaGTGTGCAGCCAACAACATA | + |
|
Preference number: 4 (lower is better) Translates to: PTQTKLHSLPVQPAEMRCNSLHT*CAANNI Trigger: TATGTTGTTGGCTGCACAGCAGGTGTGCAAGGAGTT...GCATCTCATTTCTGCGGGCTGAACCGGAAGAGAATGGAGTTTAGTTTGTGTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR CCA 90 bp | AATCTGTACACTCAACAGTTTCTCAGCACGGAGCCTCCTCGGGGACTTAGGGATTCCAGCCCTGAAATATaGGGTATTAGACTTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: NLYTQQFLSTEPPRGLRDSSPEI*GIRLAE Trigger: CTCTGCAAGTCTAATACCCCATATTTCAGGGCTGGA...ATCCCTAAGTCCCCGAGGAGGCTCCGTGCTGAGAAACTGTTGAGTGTACAGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR TCA 90 bp | AGTTTCTTGTCTGCCCAGGGAGTTCTTACAAAGGGTTCTAAAACTCGTAGCACCTTGCGAATGACAGTCTaGTCGTGTAGGAGCAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SFLSAQGVLTKGSKTRSTLRMTV*SCRSKC Trigger: GCACTTGCTCCTACACGATCAGACTGTCATTCGCAA...GGTGCTACGAGTTTTAGAACCCTTTGTAAGAACTCCCTGGGCAGACAAGAAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR TCA 90 bp | AGTTTCTTGTCTGCCCAGGGAGTTCTTACAAAGGGTTCTAAAACTCGTAGCACCTGGGTCCTTTGCGAATaGCAGTCTGATCGTGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SFLSAQGVLTKGSKTRSTWVLCE*QSDRVG Trigger: TCCTACACGATCAGACTGTCATTCGCAAAGGACCCA...GGTGCTACGAGTTTTAGAACCCTTTGTAAGAACTCCCTGGGCAGACAAGAAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR TCA 90 bp | ATCACACACAACAATTATTTAAGGAGCACGGACAGGCTTAGAGGTCCAGTCCCATGGGTCCTTTGCGAATaGCAGTCTGATCGTGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ITHNNYLRSTDRLRGPVPWVLCE*QSDRVG Trigger: TCCTACACGATCAGACTGTCATTCGCAAAGGACCCA...TGGGACTGGACCTCTAAGCCTGTCCGTGCTCCTTAAATAATTGTTGTGTGTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR GCA 90 bp | GACCAGCCAAGAGAGAAAAGCCCAGCTTCATCTTCAGTTTCAATACCCTGTGTGAACTCCTTGCACACCTaGTGTGCAGCCAACAACATA | + |
|
Preference number: 4 (lower is better) Translates to: DQPREKSPASSSVSIPCVNSLHT*CAANNI Trigger: TATGTTGTTGGCTGCACAGCAGGTGTGCAAGGAGTT...CACACAGGGTATTGAAACTGAAGATGAAGCTGGGCTTTTCTCTCTTGGCTGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR GCA 90 bp | AGTTTCTTGTCTGCCCAGGGAGTTCTTACAAAGGGTTCTAAAACTCGTAGCACCCACAGATGGCCTGGCTaGCAAAGCCATGAGTTATCA | + |
|
Preference number: 4 (lower is better) Translates to: SFLSAQGVLTKGSKTRSTHRWPG*QSHELS Trigger: TGATAACTCATGGCTTTGGCAGCCAGGCCATCTGTG...GGTGCTACGAGTTTTAGAACCCTTTGTAAGAACTCCCTGGGCAGACAAGAAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR CCA 90 bp | ATCTCTGACTTCTGCCTCCTACCAGAAGGTGTGATTGACAAGGTGGTGGGGAAATCCAGCCCTGAAATATaGGGTATTAGACTTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ISDFCLLPEGVIDKVVGKSSPEI*GIRLAE Trigger: CTCTGCAAGTCTAATACCCCATATTTCAGGGCTGGA...TTTCCCCACCACCTTGTCAATCACACCTTCTGGTAGGAGGCAGAAGTCAGAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR CCA 90 bp | GACCAGCCAAGAGAGAAAAGCCCAGCTTCATCTTCAGTTTCAATACCCTGTGTGTCCAGCCCTGAAATATaGGGTATTAGACTTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: DQPREKSPASSSVSIPCVSSPEI*GIRLAE Trigger: CTCTGCAAGTCTAATACCCCATATTTCAGGGCTGGA...CACACAGGGTATTGAAACTGAAGATGAAGCTGGGCTTTTCTCTCTTGGCTGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR TCA 90 bp | ATCTCTGACTTCTGCCTCCTACCAGAAGGTGTGATTGACAAGGTGGTGGGGAAACATGAGTTATCAGGCTaGAATGAGACAAACAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ISDFCLLPEGVIDKVVGKHELSG*NETNSF Trigger: AAAACTGTTTGTCTCATTTCAGCCTGATAACTCATG...TTTCCCCACCACCTTGTCAATCACACCTTCTGGTAGGAGGCAGAAGTCAGAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR TCA 90 bp | CCCACACAAACTAAACTCCATTCTCTTCCGGTTCAGCCCGCAGAAATGAGATGCCATGAGTTATCAGGCTaGAATGAGACAAACAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PTQTKLHSLPVQPAEMRCHELSG*NETNSF Trigger: AAAACTGTTTGTCTCATTTCAGCCTGATAACTCATG...GCATCTCATTTCTGCGGGCTGAACCGGAAGAGAATGGAGTTTAGTTTGTGTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR TCA 90 bp | AGTTTCTTGTCTGCCCAGGGAGTTCTTACAAAGGGTTCTAAAACTCGTAGCACCCATGAGTTATCAGGCTaGAATGAGACAAACAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SFLSAQGVLTKGSKTRSTHELSG*NETNSF Trigger: AAAACTGTTTGTCTCATTTCAGCCTGATAACTCATG...GGTGCTACGAGTTTTAGAACCCTTTGTAAGAACTCCCTGGGCAGACAAGAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS CCA 90 bp | CCTCCTGACTCTGTCGACCCGGCCAGGCCTGTTGCTGGCTGCCGGTaGCCGCAGGCTGGTGCAGGGGGTTCATGGCGGCAGCGTAAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PPDSVDPARPVAGCR*PQAGAGGSWRQRKP Trigger: AGGCTTACGCTGCCGCCATGAACCCCCTGCACCAGCCTGCGGCCACCGGCAGCCAGCAACAGGCCTGGCCGGGTCGACAGAGTCAGGAGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| CDS TCA 90 bp | AGGAGCAAGTGCGCGTCGTCCACATTCTGCACCTCCTCTATGGGGTaGGCCATCTCGTGCAGCCCCAGGTTCTCAGCCAGGCCGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RSKCASSTFCTSSMG*AISCSPRFSARPAS Trigger: GGAAGCCGGCCTGGCTGAGAACCTGGGGCTGCACGAGATGGCTCACCCCATAGAGGAGGTGCAGAATGTGGACGACGCGCACTTGCTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| CDS CCA 90 bp | CGTGTAGGAGCAAGTGCGCGTCGTCCACATTCTGCACCTCCTCTATaGGGTGAGCCATCTCGTGCAGCCCCAGGTTCTCAGCCAGGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RVGASARRPHSAPPL*GEPSRAAPGSQPGR Trigger: CCGGCCTGGCTGAGAACCTGGGGCTGCACGAGATGGCTCACCCCATAGAGGAGGTGCAGAATGTGGACGACGCGCACTTGCTCCTACACG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| CDS TCA 90 bp | GGGACAGTCTTCCAGGGACCGAGCAGAAGACCTCACTGGGGTTCATaGCCACTCCCACCAGGTCCTTCTGGCAAGGGAGCCCCAAAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: GTVFQGPSRRPHWGS*PLPPGPSGKGAPKG Trigger: ACCCTTTGGGGCTCCCTTGCCAGAAGGACCTGGTGGGAGTGGTCATGAACCCCAGTGAGGTCTTCTGCTCGGTCCCTGGAAGACTGTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| CDS GCA 90 bp | GTTGTCCCGGAGAGGAGAGGTGAGGGATGCGAGGGTTGCCATTACTaGTCGAGTCGTGGCGATCCTGAGGGGACGAATCCTTCGAGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: VVPERRGEGCEGCHY*SSRGDPEGTNPSSP Trigger: AGGGCTCGAAGGATTCGTCCCCTCAGGATCGCCACGACTCGAGCAGTAATGGCAACCCTCGCATCCCTCACCTCTCCTCTCCGGGACAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR CAA 90 bp | ATCTCTGACTTCTGCCTCCTACCAGAAGGTGTGATTGACAAGGTGGTGGGGAAAACCCGGCCAGGCCTGTaGCTGGCTGCCGGTGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: ISDFCLLPEGVIDKVVGKTRPGL*LAAGGR Trigger: GCGGCCACCGGCAGCCAGCAACAGGCCTGGCCGGGT...TTTCCCCACCACCTTGTCAATCACACCTTCTGGTAGGAGGCAGAAGTCAGAGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR CAA 90 bp | CCCACACAAACTAAACTCCATTCTCTTCCGGTTCAGCCCGCAGAAATGAGATGCACCCGGCCAGGCCTGTaGCTGGCTGCCGGTGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: PTQTKLHSLPVQPAEMRCTRPGL*LAAGGR Trigger: GCGGCCACCGGCAGCCAGCAACAGGCCTGGCCGGGT...GCATCTCATTTCTGCGGGCTGAACCGGAAGAGAATGGAGTTTAGTTTGTGTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| CDS GCA 90 bp | TGTAGAGATGTTGTCCCGGAGAGGAGAGGTGAGGGATGCGAGGGTTaGCATTACTGCTCGAGTCGTGGCGATCCTGAGGGGACGAATCCT | + |
|
Preference number: 5 (lower is better) Translates to: CRDVVPERRGEGCEG*HYCSSRGDPEGTNP Trigger: AGGATTCGTCCCCTCAGGATCGCCACGACTCGAGCAGTAATGGCAACCCTCGCATCCCTCACCTCTCCTCTCCGGGACAACATCTCTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR CAA 90 bp | GGAGCACGGACAGGCTTAGAGGTCCAGTCCCAATCCACACGTCACCCACACAAAGGGACTGTAGAGATGTaGTCCCGGAGAGGAGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GARTGLEVQSQSTRHPHKGTVEM*SRRGEV Trigger: CACCTCTCCTCTCCGGGACAACATCTCTACAGTCCC...TTTGTGTGGGTGACGTGTGGATTGGGACTGGACCTCTAAGCCTGTCCGTGCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| CDS TCA 90 bp | CCCCCGGGTTCATGTAGGACTTATCGATGGCGATTAGAGCCTCCTTaGTATAATTCTGCACTGCGGAGACCGCCGCACAGATGGCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PPGSCRTYRWRLEPP*YNSALRRPPHRWPG Trigger: GCCAGGCCATCTGTGCGGCGGTCTCCGCAGTGCAGAATTATATCAAGGAGGCTCTAATCGCCATCGATAAGTCCTACATGAACCCGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS CCA 90 bp | CAGAAGACCTCACTGGGGTTCATGACCACTCCCACCAGGTCCTTCTaGCAAGGGAGCCCCAAAGGGTTCTTGGTCATCGAAATGGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: QKTSLGFMTTPTRSF*QGSPKGFLVIEMGP Trigger: AGGACCCATTTCGATGACCAAGAACCCTTTGGGGCTCCCTTGCCAGAAGGACCTGGTGGGAGTGGTCATGAACCCCAGTGAGGTCTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| CDS GCA 90 bp | TGTAGAGATGTTGTCCCGGAGAGGAGAGGTGAGGGATGCGAGGGTTaGCATTACTGCTCGAGTCGTGGCGATCCTCGCAATCCTCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: CRDVVPERRGEGCEG*HYCSSRGDPRNPLH Trigger: ATGAAGAGGATTGCGAGGATCGCCACGACTCGAGCAGTAATGGCAACCCTCGCATCCCTCACCTCTCCTCTCCGGGACAACATCTCTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030391.9 |
||
| CDS-3UTR CAA 90 bp | GGAGCACGGACAGGCTTAGAGGTCCAGTCCCAATCCACACGTCACCCACACAAAGACCGGCCTCCATTTTaGGACTTTGCTCTTCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GARTGLEVQSQSTRHPHKDRPPF*DFALLS Trigger: GCTCAGAAGAGCAAAGTCCAAAAATGGAGGCCGGTC...TTTGTGTGGGTGACGTGTGGATTGGGACTGGACCTCTAAGCCTGTCCGTGCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS GCA 90 bp | CCGATCTTGATGGAGAAGGTCAGTGAACTCCTTGCACACCTGCTGTaGAGCCAACAACATACTCTTCCGCGTGGCCATCTCATTCCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PILMEKVSELLAHLL*SQQHTLPRGHLIPS Trigger: GGACGGAATGAGATGGCCACGCGGAAGAGTATGTTGTTGGCTGCACAGCAGGTGTGCAAGGAGTTCACTGACCTTCTCCATCAAGATCGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR CAA 90 bp | GGAGCACGGACAGGCTTAGAGGTCCAGTCCCAATCCACACGTCACCCACACAAAGTTGGGTGTCCGATCTaGATGGAGAAGGTCAGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: GARTGLEVQSQSTRHPHKVGCPI*MEKVSE Trigger: TTCACTGACCTTCTCCATCAAGATCGGACACCCAAC...TTTGTGTGGGTGACGTGTGGATTGGGACTGGACCTCTAAGCCTGTCCGTGCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR CAA 90 bp | ATCTCTGACTTCTGCCTCCTACCAGAAGGTGTGATTGACAAGGTGGTGGGGAAAGGGACTGTAGAGATGTaGTCCCGGAGAGGAGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ISDFCLLPEGVIDKVVGKGTVEM*SRRGEV Trigger: CACCTCTCCTCTCCGGGACAACATCTCTACAGTCCC...TTTCCCCACCACCTTGTCAATCACACCTTCTGGTAGGAGGCAGAAGTCAGAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| CDS CCA 90 bp | ACTCCTTGCACACCTGCTGTGCAGCCAACAACATACTCTTCCGCGTaGCCATCTCATTCCGTCCCCCAAGATGTGGTCTCGTTAAATAGT | + |
|
Preference number: 5 (lower is better) Translates to: TPCTPAVQPTTYSSA*PSHSVPQDVVSLNS Trigger: ACTATTTAACGAGACCACATCTTGGGGGACGGAATGAGATGGCCACGCGGAAGAGTATGTTGTTGGCTGCACAGCAGGTGTGCAAGGAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| CDS-3UTR CAA 90 bp | AATCTGTACACTCAACAGTTTCTCAGCACGGAGCCTCCTCGGGGACTTAGGGATGACCGGCCTCCATTTTaGGACTTTGCTCTTCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: NLYTQQFLSTEPPRGLRDDRPPF*DFALLS Trigger: GCTCAGAAGAGCAAAGTCCAAAAATGGAGGCCGGTC...ATCCCTAAGTCCCCGAGGAGGCTCCGTGCTGAGAAACTGTTGAGTGTACAGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR CAA 90 bp | ATCACACACAACAATTATTTAAGGAGCACGGACAGGCTTAGAGGTCCAGTCCCAGGGACTGTAGAGATGTaGTCCCGGAGAGGAGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ITHNNYLRSTDRLRGPVPGTVEM*SRRGEV Trigger: CACCTCTCCTCTCCGGGACAACATCTCTACAGTCCC...TGGGACTGGACCTCTAAGCCTGTCCGTGCTCCTTAAATAATTGTTGTGTGTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| CDS-3UTR CAA 90 bp | CCCACACAAACTAAACTCCATTCTCTTCCGGTTCAGCCCGCAGAAATGAGATGCGACCGGCCTCCATTTTaGGACTTTGCTCTTCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PTQTKLHSLPVQPAEMRCDRPPF*DFALLS Trigger: GCTCAGAAGAGCAAAGTCCAAAAATGGAGGCCGGTC...GCATCTCATTTCTGCGGGCTGAACCGGAAGAGAATGGAGTTTAGTTTGTGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| CDS-3UTR CAA 90 bp | GGAGCACGGACAGGCTTAGAGGTCCAGTCCCAATCCACACGTCACCCACACAAAAGGTTCAATCCAATTTaGTCCAACTTCTCCCTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GARTGLEVQSQSTRHPHKRFNPI*SNFSLK Trigger: CTTGAGGGAGAAGTTGGACAAAATTGGATTGAACCT...TTTGTGTGGGTGACGTGTGGATTGGGACTGGACCTCTAAGCCTGTCCGTGCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| CDS-3UTR CAA 90 bp | CCCACACAAACTAAACTCCATTCTCTTCCGGTTCAGCCCGCAGAAATGAGATGCTCAGCCACAGTTACTTaGTACTTCGACGTGGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PTQTKLHSLPVQPAEMRCSATVT*YFDVEL Trigger: CAGCTCCACGTCGAAGTACAAAGTAACTGTGGCTGA...GCATCTCATTTCTGCGGGCTGAACCGGAAGAGAATGGAGTTTAGTTTGTGTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR CAA 90 bp | ATCTCTGACTTCTGCCTCCTACCAGAAGGTGTGATTGACAAGGTGGTGGGGAAAGTTGGGTGTCCGATCTaGATGGAGAAGGTCAGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: ISDFCLLPEGVIDKVVGKVGCPI*MEKVSE Trigger: TTCACTGACCTTCTCCATCAAGATCGGACACCCAAC...TTTCCCCACCACCTTGTCAATCACACCTTCTGGTAGGAGGCAGAAGTCAGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| CDS-3UTR CAA 90 bp | GACCAGCCAAGAGAGAAAAGCCCAGCTTCATCTTCAGTTTCAATACCCTGTGTGTCAGCCACAGTTACTTaGTACTTCGACGTGGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: DQPREKSPASSSVSIPCVSATVT*YFDVEL Trigger: CAGCTCCACGTCGAAGTACAAAGTAACTGTGGCTGA...CACACAGGGTATTGAAACTGAAGATGAAGCTGGGCTTTTCTCTCTTGGCTGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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| CDS-3UTR CAA 90 bp | ATCACACACAACAATTATTTAAGGAGCACGGACAGGCTTAGAGGTCCAGTCCCAGTTGGGTGTCCGATCTaGATGGAGAAGGTCAGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: ITHNNYLRSTDRLRGPVPVGCPI*MEKVSE Trigger: TTCACTGACCTTCTCCATCAAGATCGGACACCCAAC...TGGGACTGGACCTCTAAGCCTGTCCGTGCTCCTTAAATAATTGTTGTGTGTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS-3UTR CAA 90 bp | ATCACACACAACAATTATTTAAGGAGCACGGACAGGCTTAGAGGTCCAGTCCCAAGGTTCAATCCAATTTaGTCCAACTTCTCCCTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: ITHNNYLRSTDRLRGPVPRFNPI*SNFSLK Trigger: CTTGAGGGAGAAGTTGGACAAAATTGGATTGAACCT...TGGGACTGGACCTCTAAGCCTGTCCGTGCTCCTTAAATAATTGTTGTGTGTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS GCA 72 bp | GTAAGGCGGCGGGAAGTAAGGAGGCGGCTGGTACTCTaGAACCCCGGTGTGCGAGAGAGGCGGCGCGGGACT | + |
|
Preference number: 6 (lower is better) Translates to: VRRREVRRRLVL*NPGVRERRRGT Trigger: AGTCCCGCGCCGCCTCTCTCGCACACCGGGGTTGCAGAGTACCAGCCGCCTCCTTACTTCCCGCCGCCTTAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS CAA 72 bp | GGTGTGCGAGAGAGGCGGCGCGGGACTGTAGAGATGTaGTCCCGGAGAGGAGAGGTGAGGGATGCGAGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: GVRERRRGTVEM*SRRGEVRDARV Trigger: AACCCTCGCATCCCTCACCTCTCCTCTCCGGGACAACATCTCTACAGTCCCGCGCCGCCTCTCTCGCACACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS CAA 90 bp | TGCAACCCCGGTGTGCGAGAGAGGCGGCGCGGGACTGTAGAGATGTaGTCCCGGAGAGGAGAGGTGAGGGATGCGAGGGTTGCCATTACT | + |
|
Preference number: 6 (lower is better) Translates to: CNPGVRERRRGTVEM*SRRGEVRDARVAIT Trigger: AGTAATGGCAACCCTCGCATCCCTCACCTCTCCTCTCCGGGACAACATCTCTACAGTCCCGCGCCGCCTCTCTCGCACACCGGGGTTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS GCA 72 bp | GTTGTCCCGGAGAGGAGAGGTGAGGGATGCGAGGGTTaGCATTACTGCTCGAGTCGTGGCGATCCTGAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: VVPERRGEGCEG*HYCSSRGDPEG Trigger: CCCCTCAGGATCGCCACGACTCGAGCAGTAATGGCAACCCTCGCATCCCTCACCTCTCCTCTCCGGGACAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS TCA 72 bp | TTCCAGGGACCGAGCAGAAGACCTCACTGGGGTTCATaGCCACTCCCACCAGGTCCTTCTGGCAAGGGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: FQGPSRRPHWGS*PLPPGPSGKGA Trigger: GGCTCCCTTGCCAGAAGGACCTGGTGGGAGTGGTCATGAACCCCAGTGAGGTCTTCTGCTCGGTCCCTGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS TCA 72 bp | CGAGGGTTGCCATTACTGCTCGAGTCGTGGCGATCCTaGGGGGACGAATCCTTCGAGCCCTCTGGCGAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: RGLPLLLESWRS*GDESFEPSGEG Trigger: ACCTTCGCCAGAGGGCTCGAAGGATTCGTCCCCTCAGGATCGCCACGACTCGAGCAGTAATGGCAACCCTCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS CCA 72 bp | GCAAGTGCGCGTCGTCCACATTCTGCACCTCCTCTATaGGGTGAGCCATCTCGTGCAGCCCCAGGTTCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: ASARRPHSAPPL*GEPSRAAPGSQ Trigger: CTGAGAACCTGGGGCTGCACGAGATGGCTCACCCCATAGAGGAGGTGCAGAATGTGGACGACGCGCACTTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS GCA 72 bp | GTTGTCCCGGAGAGGAGAGGTGAGGGATGCGAGGGTTaGCATTACTGCTCGAGTCGTGGCGATCCTCGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: VVPERRGEGCEG*HYCSSRGDPRN Trigger: ATTGCGAGGATCGCCACGACTCGAGCAGTAATGGCAACCCTCGCATCCCTCACCTCTCCTCTCCGGGACAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030391.9 |
||
| CDS CAA 90 bp | CTCCAAGACCTGGGCGGGCCTGTTGTTCCCGTTGGGTGTCCGATCTaGATGGAGAAGGTCAGTGAACTCCTTGCACACCTGCTGTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LQDLGGPVVPVGCPI*MEKVSELLAHLLCS Trigger: GCTGCACAGCAGGTGTGCAAGGAGTTCACTGACCTTCTCCATCAAGATCGGACACCCAACGGGAACAACAGGCCCGCCCAGGTCTTGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS CAA 72 bp | CTGGGCGGGCCTGTTGTTCCCGTTGGGTGTCCGATCTaGATGGAGAAGGTCAGTGAACTCCTTGCACACCTG | + |
|
Preference number: 6 (lower is better) Translates to: LGGPVVPVGCPI*MEKVSELLAHL Trigger: CAGGTGTGCAAGGAGTTCACTGACCTTCTCCATCAAGATCGGACACCCAACGGGAACAACAGGCCCGCCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS CCA 72 bp | TCACTGGGGTTCATGACCACTCCCACCAGGTCCTTCTaGCAAGGGAGCCCCAAAGGGTTCTTGGTCATCGAA | + |
|
Preference number: 6 (lower is better) Translates to: SLGFMTTPTRSF*QGSPKGFLVIE Trigger: TTCGATGACCAAGAACCCTTTGGGGCTCCCTTGCCAGAAGGACCTGGTGGGAGTGGTCATGAACCCCAGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS CCA 72 bp | ACACCTGCTGTGCAGCCAACAACATACTCTTCCGCGTaGCCATCTCATTCCGTCCCCCAAGATGTGGTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: TPAVQPTTYSSA*PSHSVPQDVVS Trigger: CGAGACCACATCTTGGGGGACGGAATGAGATGGCCACGCGGAAGAGTATGTTGTTGGCTGCACAGCAGGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS GCA 72 bp | ATGGAGAAGGTCAGTGAACTCCTTGCACACCTGCTGTaGAGCCAACAACATACTCTTCCGCGTGGCCATCTC | + |
|
Preference number: 6 (lower is better) Translates to: MEKVSELLAHLL*SQQHTLPRGHL Trigger: GAGATGGCCACGCGGAAGAGTATGTTGTTGGCTGCACAGCAGGTGTGCAAGGAGTTCACTGACCTTCTCCAT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
||
| CDS TCA 72 bp | TTGGTCATCGAAATGGGTCCTTTGCGAATGACAGTCTaGTCGTGTAGGAGCAAGTGCGCGTCGTCCACATTC | + |
|
Preference number: 6 (lower is better) Translates to: LVIEMGPLRMTV*SCRSKCASSTF Trigger: GAATGTGGACGACGCGCACTTGCTCCTACACGATCAGACTGTCATTCGCAAAGGACCCATTTCGATGACCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030391.9 ENSMUST00000099058.10 ENSMUST00000170744.2 |
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