Pregenerated sensors for TFAP2B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025927Ensembl transcript IDs: ENSMUST00000027059.11, ENSMUST00000064976.6, ENSMUST00000187754.7
Found 240 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAATGGCTTTACAGAGCTCTGGCATCCCTCCCCCGCAGCAGCCAGTaGGGCGCCGCCCCTTTACCTACTCGGGAACCGGCCCTTCGCGGC | + |
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Preference number: 1 (lower is better) Translates to: KWLYRALASLPRSSQ*GAAPLPTREPALRG Trigger: GCCGCGAAGGGCCGGTTCCCGAGTAGGTAAAGGGGCGGCGCCCCACTGGCTGCTGCGGGGGAGGGATGCCAGAGCTCTGTAAAGCCATTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
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| 3UTR TCA 90 bp | CCGAGAGCAAGAAGGGCCTGTACGGCTCGCGCCCTCAGCAGCTGCTaGTTCTATGTCCTCAACACCACTGGGCTTCAGTGGCCCACATGT | + |
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Preference number: 1 (lower is better) Translates to: PRARRACTARALSSC*FYVLNTTGLQWPTC Trigger: ACATGTGGGCCACTGAAGCCCAGTGGTGTTGAGGACATAGAATCAGCAGCTGCTGAGGGCGCGAGCCGTACAGGCCCTTCTTGCTCTCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
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| 3UTR GCA 90 bp | ACCCCGGAGATGGGGGAGGGAAGCCTCAAGCCAGGTCTATCTAGCTaGCCCTTCGCTGATGCTCACAGGAACATCAGGGCATCTAAGGGA | + |
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Preference number: 1 (lower is better) Translates to: TPEMGEGSLKPGLSS*PFADAHRNIRASKG Trigger: TCCCTTAGATGCCCTGATGTTCCTGTGAGCATCAGCGAAGGGGCAGCTAGATAGACCTGGCTTGAGGCTTCCCTCCCCCATCTCCGGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
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| 3UTR GCA 90 bp | TCCTCAACACCACTGGGCTTCAGTGGCCCACATGTTCCCAGGACCTaGACAGTAAGAGCAAGGCGCATCCATCGCGTCTCTCGATGTCAC | + |
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Preference number: 1 (lower is better) Translates to: SSTPLGFSGPHVPRT*TVRARRIHRVSRCH Trigger: GTGACATCGAGAGACGCGATGGATGCGCCTTGCTCTTACTGTGCAGGTCCTGGGAACATGTGGGCCACTGAAGCCCAGTGGTGTTGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
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| 3UTR CCA 90 bp | AGTAAGAGCAAGGCGCATCCATCGCGTCTCTCGATGTCACACGCGTaGGGCGCGTTGCCCTGCAAGGAAAGGAGACGATGTTTTTCAATG | + |
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Preference number: 1 (lower is better) Translates to: SKSKAHPSRLSMSHA*GALPCKERRRCFSM Trigger: CATTGAAAAACATCGTCTCCTTTCCTTGCAGGGCAACGCGCCCCACGCGTGTGACATCGAGAGACGCGATGGATGCGCCTTGCTCTTACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
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| 3UTR TCA 90 bp | AAGAACCGAAGTGGAAAATCCGGACGGTTGTCTCCACGTGTATCTTaGAATAGACACCGAGAGCCGGTTTGTTGCTCCGTTGTATGCCTC | + |
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Preference number: 1 (lower is better) Translates to: KNRSGKSGRLSPRVS*NRHREPVCCSVVCL Trigger: GAGGCATACAACGGAGCAACAAACCGGCTCTCGGTGTCTATTTCAAGATACACGTGGAGACAACCGTCCGGATTTTCCACTTCGGTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
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| 3UTR GCA 90 bp | AATATAGGTCCCAAAGCCAAGATACCTTACTCGACTCCCTTAAAATaGATTCTGCAGTGTCCCGCCCCTGCTGGAATTCCTGCGTTGAGG | + |
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Preference number: 1 (lower is better) Translates to: NIGPKAKIPYSTPLK*ILQCPAPAGIPALR Trigger: CCTCAACGCAGGAATTCCAGCAGGGGCGGGACACTGCAGAATGCATTTTAAGGGAGTCGAGTAAGGTATCTTGGCTTTGGGACCTATATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
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| 3UTR CCA 90 bp | CCCAAATCTTCCTTGAAGAAGCTCATAAACCATGCGGGTAAAGCTTaGGGAAACAGAAGAGAGTCAGTGGTACATACCCCTCCGAAGGAA | + |
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Preference number: 1 (lower is better) Translates to: PKSSLKKLINHAGKA*GNRRESVVHTPPKE Trigger: TTCCTTCGGAGGGGTATGTACCACTGACTCTCTTCTGTTTCCCCAAGCTTTACCCGCATGGTTTATGAGCTTCTTCAAGGAAGATTTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
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| 3UTR TCA 90 bp | AGTTGGAAGGTTGGGGTTTCCCATTCGACCAGTTTTCAAAGGTTATaGAATAATTGCTTAAGAGAAAGTTCCTGGCCAAGGCCAACAAAG | + |
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Preference number: 1 (lower is better) Translates to: SWKVGVSHSTSFQRL*NNCLRESSWPRPTK Trigger: CTTTGTTGGCCTTGGCCAGGAACTTTCTCTTAAGCAATTATTTCATAACCTTTGAAAACTGGTCGAATGGGAAACCCCAACCTTCCAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
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| 3UTR-3UTR CCA 90 bp | GCCTTAGCCCTTAGGGTGAGGCCGAGAGCAAGAAGGGCCTGTACGGCTCGCGCCTGTCCTCAACACCACTaGGCTTCAGTGGCCCACATG | + |
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Preference number: 2 (lower is better) Translates to: ALALRVRPRARRACTARACPQHH*ASVAHM Trigger: CATGTGGGCCACTGAAGCCCAGTGGTGTTGAGGACA...GGCGCGAGCCGTACAGGCCCTTCTTGCTCTCGGCCTCACCCTAAGGGCTAAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
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| 3UTR CAA 90 bp | CTCCAGCAGTCACCGGCCTACGCTTCAGTCTTTAGCTATTTGGTTTaGGACCCCCGGCATTTGGTAGGGCTTGGGGGTGGTGGGAGCGGG | + |
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Preference number: 2 (lower is better) Translates to: LQQSPAYASVFSYLV*DPRHLVGLGGGGSG Trigger: CCCGCTCCCACCACCCCCAAGCCCTACCAAATGCCGGGGGTCCAAAACCAAATAGCTAAAGACTGAAGCGTAGGCCGGTGACTGCTGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
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| 3UTR-3UTR CCA 90 bp | CAAGAAGGGCCTGTACGGCTCGCGCCCTCAGCAGCTGCTGATTCTATGTCCTCAGTGTCCCGCCCCTGCTaGAATTCCTGCGTTGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: QEGPVRLAPSAAADSMSSVSRPC*NSCVEV Trigger: CACCTCAACGCAGGAATTCCAGCAGGGGCGGGACAC...TGAGGACATAGAATCAGCAGCTGCTGAGGGCGCGAGCCGTACAGGCCCTTCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
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| 3UTR-3UTR CCA 90 bp | CAAGAAGGGCCTGTACGGCTCGCGCCCTCAGCAGCTGCTGATTCTATGTCCTCAACCACTGGGCTTCAGTaGCCCACATGTTCCCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: QEGPVRLAPSAAADSMSSTTGLQ*PTCSQD Trigger: GTCCTGGGAACATGTGGGCCACTGAAGCCCAGTGGT...TGAGGACATAGAATCAGCAGCTGCTGAGGGCGCGAGCCGTACAGGCCCTTCTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
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| 3UTR-3UTR CCA 90 bp | AGAAGGGGCTCCAAGGACCTTGGGGGAACTCCAGCAGTCACCGGCCTACGCTTCTCGAAAGAACCGAAGTaGAAAATCCGGACGGTTGTC | + |
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Preference number: 2 (lower is better) Translates to: RRGSKDLGGTPAVTGLRFSKEPK*KIRTVV Trigger: GACAACCGTCCGGATTTTCCACTTCGGTTCTTTCGA...GAAGCGTAGGCCGGTGACTGCTGGAGTTCCCCCAAGGTCCTTGGAGCCCCTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
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| 3UTR-3UTR TCA 90 bp | TTCGCTGATGCTCACAGGAACATCAGGGCATCTAAGGGAGCCTACCTACCCAAGGCCCTCAGCAGCTGCTaGTTCTATGTCCTCAACACC | + |
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Preference number: 2 (lower is better) Translates to: FADAHRNIRASKGAYLPKALSSC*FYVLNT Trigger: GGTGTTGAGGACATAGAATCAGCAGCTGCTGAGGGC...CTTGGGTAGGTAGGCTCCCTTAGATGCCCTGATGTTCCTGTGAGCATCAGCGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
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| 3UTR-3UTR CCA 90 bp | TTCGCTGATGCTCACAGGAACATCAGGGCATCTAAGGGAGCCTACCTACCCAAGACAGAAGAGAGTCAGTaGTACATACCCCTCCGAAGG | + |
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Preference number: 2 (lower is better) Translates to: FADAHRNIRASKGAYLPKTEESQ*YIPLRR Trigger: CCTTCGGAGGGGTATGTACCACTGACTCTCTTCTGT...CTTGGGTAGGTAGGCTCCCTTAGATGCCCTGATGTTCCTGTGAGCATCAGCGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
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| 3UTR-3UTR TCA 90 bp | CTTCAAAAGCCCGTTGAGCTCTTTATATGGGGGTGGAGAAAGCTATGGAAGAAGTTTCCGGGATCGCTGTaGGGAAGGGAGAAAGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: LQKPVELFIWGWRKLWKKFPGSL*GREKGK Trigger: CTTCCCTTTCTCCCTTCCTCACAGCGATCCCGGAAA...CTTCTTCCATAGCTTTCTCCACCCCCATATAAAGAGCTCAACGGGCTTTTGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
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| 3UTR CAA 90 bp | AAGTTCCTGGCCAAGGCCAACAAAGGTCGGATCTTCAAAAGCCCGTaGAGCTCTTTATATGGGGGTGGAGAAAGCTATGGAAGAAGGAGT | + |
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Preference number: 2 (lower is better) Translates to: KFLAKANKGRIFKSP*SSLYGGGESYGRRS Trigger: ACTCCTTCTTCCATAGCTTTCTCCACCCCCATATAAAGAGCTCAACGGGCTTTTGAAGATCCGACCTTTGTTGGCCTTGGCCAGGAACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
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| 3UTR-3UTR GCA 90 bp | GCCCCTTCGCTGATGCTCACAGGAACATCAGGGCATCTAAGGGAGCCTACCTACGTGTGTACCATTTTATaGCAAAATACCTGTGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: APSLMLTGTSGHLREPTYVCTIL*QNTCVS Trigger: AGACACACAGGTATTTTGGCATAAAATGGTACACAC...GTAGGTAGGCTCCCTTAGATGCCCTGATGTTCCTGTGAGCATCAGCGAAGGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
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| 3UTR-3UTR CCA 90 bp | GCCCCTTCGCTGATGCTCACAGGAACATCAGGGCATCTAAGGGAGCCTACCTACGCAATAAAGAACACATaGAAGTTTCAAATTCCATGG | + |
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Preference number: 2 (lower is better) Translates to: APSLMLTGTSGHLREPTYAIKNT*KFQIPW Trigger: CCATGGAATTTGAAACTTCCATGTGTTCTTTATTGC...GTAGGTAGGCTCCCTTAGATGCCCTGATGTTCCTGTGAGCATCAGCGAAGGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
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| 3UTR CAA 90 bp | GAAACCTATGGGGCTCAGAAGCAGCTAGAGATAGGAGCAGAGATGTaGCCTGACCTCAATTTTTGTTTACAACCTTCATCCTTTGAGCGA | + |
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Preference number: 2 (lower is better) Translates to: ETYGAQKQLEIGAEM*PDLNFCLQPSSFER Trigger: TCGCTCAAAGGATGAAGGTTGTAAACAAAAATTGAGGTCAGGCAACATCTCTGCTCCTATCTCTAGCTGCTTCTGAGCCCCATAGGTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
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| 3UTR CAA 90 bp | AAACTTAACACAGATACCCTCCAGAGTGCCCTCGAGAAGAGGCAGTaGTTACCTCTTGACTGGGTGGTCAAAACAAATGGTACTGAATTA | + |
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Preference number: 2 (lower is better) Translates to: KLNTDTLQSALEKRQ*LPLDWVVKTNGTEL Trigger: TAATTCAGTACCATTTGTTTTGACCACCCAGTCAAGAGGTAACAACTGCCTCTTCTCGAGGGCACTCTGGAGGGTATCTGTGTTAAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
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| 3UTR-3UTR GCA 90 bp | CTCGAGAAGAGGCAGTTGTTACCTCTTGACTGGGTGGTCAAAACAAATGGTACTAGATTTAAAAGTTCGTaGGTCTCAGTCAACCAGCTC | + |
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Preference number: 2 (lower is better) Translates to: LEKRQLLPLDWVVKTNGTRFKSS*VSVNQL Trigger: GAGCTGGTTGACTGAGACGCACGAACTTTTAAATCT...AGTACCATTTGTTTTGACCACCCAGTCAAGAGGTAACAACTGCCTCTTCTCGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
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| 3UTR CAA 90 bp | TGTTTCTCAGTACCTTATAGATTGTGTAGGAAGCCCAAATCTTCCTaGAAGAAGCTCATAAACCATGCGGGTAAAGCTTGGGGAAACAGA | + |
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Preference number: 2 (lower is better) Translates to: CFSVPYRLCRKPKSS*KKLINHAGKAWGNR Trigger: TCTGTTTCCCCAAGCTTTACCCGCATGGTTTATGAGCTTCTTCAAGGAAGATTTGGGCTTCCTACACAATCTATAAGGTACTGAGAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
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| 3UTR CAA 90 bp | CCCAAACTAAATGTGTGCACCAATCAAATACTCTACTCCTTGAACTaGCTAAAGGTGCCGGTTTTACTTCGTGGTAATATTAAGATGGGG | + |
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Preference number: 2 (lower is better) Translates to: PKLNVCTNQILYSLN*LKVPVLLRGNIKMG Trigger: CCCCATCTTAATATTACCACGAAGTAAAACCGGCACCTTTAGCAAGTTCAAGGAGTAGAGTATTTGATTGGTGCACACATTTAGTTTGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
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| 3UTR-3UTR CCA 90 bp | CTCGAGAAGAGGCAGTTGTTACCTCTTGACTGGGTGGTCAAAACAAATGGTACTGTGGTAATATTAAGATaGGGTACAGTAAAAAGTTGG | + |
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Preference number: 2 (lower is better) Translates to: LEKRQLLPLDWVVKTNGTVVILR*GTVKSW Trigger: CCAACTTTTTACTGTACCCCATCTTAATATTACCAC...AGTACCATTTGTTTTGACCACCCAGTCAAGAGGTAACAACTGCCTCTTCTCGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
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| 3UTR CAA 90 bp | AGTGTACCCAAACTAAATGTGTGCACCAATCAAATACTCTACTCCTaGAACTTGCTAAAGGTGCCGGTTTTACTTCGTGGTAATATTAAG | + |
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Preference number: 2 (lower is better) Translates to: SVPKLNVCTNQILYS*NLLKVPVLLRGNIK Trigger: CTTAATATTACCACGAAGTAAAACCGGCACCTTTAGCAAGTTCAAGGAGTAGAGTATTTGATTGGTGCACACATTTAGTTTGGGTACACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
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| 3UTR CCA 72 bp | TACAGAGCTCTGGCATCCCTCCCCCGCAGCAGCCAGTaGGGCGCCGCCCCTTTACCTACTCGGGAACCGGCC | + |
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Preference number: 3 (lower is better) Translates to: YRALASLPRSSQ*GAAPLPTREPA Trigger: GGCCGGTTCCCGAGTAGGTAAAGGGGCGGCGCCCCACTGGCTGCTGCGGGGGAGGGATGCCAGAGCTCTGTA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
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| 3UTR CCA 72 bp | AAGGCGCATCCATCGCGTCTCTCGATGTCACACGCGTaGGGCGCGTTGCCCTGCAAGGAAAGGAGACGATGT | + |
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Preference number: 3 (lower is better) Translates to: KAHPSRLSMSHA*GALPCKERRRC Trigger: ACATCGTCTCCTTTCCTTGCAGGGCAACGCGCCCCACGCGTGTGACATCGAGAGACGCGATGGATGCGCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
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| 3UTR TCA 72 bp | AGAAGGGCCTGTACGGCTCGCGCCCTCAGCAGCTGCTaGTTCTATGTCCTCAACACCACTGGGCTTCAGTGG | + |
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Preference number: 3 (lower is better) Translates to: RRACTARALSSC*FYVLNTTGLQW Trigger: CCACTGAAGCCCAGTGGTGTTGAGGACATAGAATCAGCAGCTGCTGAGGGCGCGAGCCGTACAGGCCCTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
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| 3UTR GCA 72 bp | CCACTGGGCTTCAGTGGCCCACATGTTCCCAGGACCTaGACAGTAAGAGCAAGGCGCATCCATCGCGTCTCT | + |
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Preference number: 3 (lower is better) Translates to: PLGFSGPHVPRT*TVRARRIHRVS Trigger: AGAGACGCGATGGATGCGCCTTGCTCTTACTGTGCAGGTCCTGGGAACATGTGGGCCACTGAAGCCCAGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
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| 3UTR-3UTR CAA 90 bp | GCCTTAGCCCTTAGGGTGAGGCCGAGAGCAAGAAGGGCCTGTACGGCTCGCGCCCAGCTCTCAAAAGCATaGACACCAACGTTTCTCCAA | + |
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Preference number: 3 (lower is better) Translates to: ALALRVRPRARRACTARAQLSKA*TPTFLQ Trigger: TTGGAGAAACGTTGGTGTCAATGCTTTTGAGAGCTG...GGCGCGAGCCGTACAGGCCCTTCTTGCTCTCGGCCTCACCCTAAGGGCTAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
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| 3UTR GCA 72 bp | ATGGGGGAGGGAAGCCTCAAGCCAGGTCTATCTAGCTaGCCCTTCGCTGATGCTCACAGGAACATCAGGGCA | + |
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Preference number: 3 (lower is better) Translates to: MGEGSLKPGLSS*PFADAHRNIRA Trigger: TGCCCTGATGTTCCTGTGAGCATCAGCGAAGGGGCAGCTAGATAGACCTGGCTTGAGGCTTCCCTCCCCCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
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| 3UTR TCA 72 bp | TTCTGCAGTGTCCCGCCCCTGCTGGAATTCCTGCGTTaGGGTGTGTTAGCAAGAAATCCAAAGCCGCTCCCC | + |
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Preference number: 3 (lower is better) Translates to: FCSVPPLLEFLR*GVLARNPKPLP Trigger: GGGGAGCGGCTTTGGATTTCTTGCTAACACACCTCAACGCAGGAATTCCAGCAGGGGCGGGACACTGCAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
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| 3UTR CCA 72 bp | CCTCAGCAGCTGCTGATTCTATGTCCTCAACACCACTaGGCTTCAGTGGCCCACATGTTCCCAGGACCTGCA | + |
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Preference number: 3 (lower is better) Translates to: PQQLLILCPQHH*ASVAHMFPGPA Trigger: TGCAGGTCCTGGGAACATGTGGGCCACTGAAGCCCAGTGGTGTTGAGGACATAGAATCAGCAGCTGCTGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
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| 3UTR GCA 72 bp | CATCGCGTCTCTCGATGTCACACGCGTGGGGCGCGTTaGCCTGCAAGGAAAGGAGACGATGTTTTTCAATGT | + |
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Preference number: 3 (lower is better) Translates to: HRVSRCHTRGAR*PARKGDDVFQC Trigger: ACATTGAAAAACATCGTCTCCTTTCCTTGCAGGGCAACGCGCCCCACGCGTGTGACATCGAGAGACGCGATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
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| 3UTR CCA 72 bp | AATCAACTTATCGGTTTCCTCTCTGCCGCGGGAGCCTaGGCTCTCAAGCCTGGATCAAAAGCTAGAGCCTCC | + |
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Preference number: 3 (lower is better) Translates to: NQLIGFLSAAGA*ALKPGSKARAS Trigger: GGAGGCTCTAGCTTTTGATCCAGGCTTGAGAGCCCAGGCTCCCGCGGCAGAGAGGAAACCGATAAGTTGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
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| 3UTR GCA 72 bp | AGGAACCAAGATGAATCAACTTATCGGTTTCCTCTCTaGCGCGGGAGCCTGGGCTCTCAAGCCTGGATCAAA | + |
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Preference number: 3 (lower is better) Translates to: RNQDESTYRFPL*RGSLGSQAWIK Trigger: TTTGATCCAGGCTTGAGAGCCCAGGCTCCCGCGGCAGAGAGGAAACCGATAAGTTGATTCATCTTGGTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
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| 3UTR-3UTR CAA 90 bp | CTAAATTCGAAAGAACCGAAGTGGAAAATCCGGACGGTTGTCTCCACGTGTATCCCGAGAGCCGGTTTGTaGCTCCGTTGTATGCCTCAG | + |
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Preference number: 3 (lower is better) Translates to: LNSKEPKWKIRTVVSTCIPRAGL*LRCMPQ Trigger: CTGAGGCATACAACGGAGCAACAAACCGGCTCTCGG...GATACACGTGGAGACAACCGTCCGGATTTTCCACTTCGGTTCTTTCGAATTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
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| 3UTR GCA 72 bp | CCCAAAGCCAAGATACCTTACTCGACTCCCTTAAAATaGATTCTGCAGTGTCCCGCCCCTGCTGGAATTCCT | + |
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Preference number: 3 (lower is better) Translates to: PKAKIPYSTPLK*ILQCPAPAGIP Trigger: AGGAATTCCAGCAGGGGCGGGACACTGCAGAATGCATTTTAAGGGAGTCGAGTAAGGTATCTTGGCTTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
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| 3UTR-3UTR CAA 90 bp | AAATTCGAAAGAACCGAAGTGGAAAATCCGGACGGTTGTCTCCACGTGTATCTTCCGAGAGCCGGTTTGTaGCTCCGTTGTATGCCTCAG | + |
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Preference number: 3 (lower is better) Translates to: KFERTEVENPDGCLHVYLPRAGL*LRCMPQ Trigger: CTGAGGCATACAACGGAGCAACAAACCGGCTCTCGG...AAGATACACGTGGAGACAACCGTCCGGATTTTCCACTTCGGTTCTTTCGAATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
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| 3UTR TCA 72 bp | AGTGGAAAATCCGGACGGTTGTCTCCACGTGTATCTTaGAATAGACACCGAGAGCCGGTTTGTTGCTCCGTT | + |
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Preference number: 3 (lower is better) Translates to: SGKSGRLSPRVS*NRHREPVCCSV Trigger: AACGGAGCAACAAACCGGCTCTCGGTGTCTATTTCAAGATACACGTGGAGACAACCGTCCGGATTTTCCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
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| 3UTR-3UTR CAA 90 bp | ACCTCAATTTTTGTTTACAACCTTCATCCTTTGAGCGATTCCCTCAGAGGGTCCACACCGAGAGCCGGTTaGTTGCTCCGTTGTATGCCT | + |
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Preference number: 3 (lower is better) Translates to: TSIFVYNLHPLSDSLRGSTPRAG*LLRCMP Trigger: AGGCATACAACGGAGCAACAAACCGGCTCTCGGTGT...GGACCCTCTGAGGGAATCGCTCAAAGGATGAAGGTTGTAAACAAAAATTGAGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
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| 3UTR-3UTR CAA 90 bp | TTCGCTGATGCTCACAGGAACATCAGGGCATCTAAGGGAGCCTACCTACCCAAGAAAAGGATCAGGTTGTaGCTGTTGTTTCTCAGTACC | + |
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Preference number: 3 (lower is better) Translates to: FADAHRNIRASKGAYLPKKRIRL*LLFLST Trigger: GGTACTGAGAAACAACAGCAACAACCTGATCCTTTT...CTTGGGTAGGTAGGCTCCCTTAGATGCCCTGATGTTCCTGTGAGCATCAGCGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
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| 3UTR-3UTR CAA 90 bp | GCCCCTTCGCTGATGCTCACAGGAACATCAGGGCATCTAAGGGAGCCTACCTACTTAAAAAGGATCAGGTaGTTGCTGTTGTTTCTCAGT | + |
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Preference number: 3 (lower is better) Translates to: APSLMLTGTSGHLREPTYLKRIR*LLLFLS Trigger: ACTGAGAAACAACAGCAACAACCTGATCCTTTTTAA...GTAGGTAGGCTCCCTTAGATGCCCTGATGTTCCTGTGAGCATCAGCGAAGGGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
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| 3UTR-3UTR CAA 90 bp | TTCGCTGATGCTCACAGGAACATCAGGGCATCTAAGGGAGCCTACCTACCCAAGATAGGAGCAGAGATGTaGCCTGACCTCAATTTTTGT | + |
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Preference number: 3 (lower is better) Translates to: FADAHRNIRASKGAYLPKIGAEM*PDLNFC Trigger: ACAAAAATTGAGGTCAGGCAACATCTCTGCTCCTAT...CTTGGGTAGGTAGGCTCCCTTAGATGCCCTGATGTTCCTGTGAGCATCAGCGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
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| 3UTR-3UTR CAA 90 bp | CTCGAGAAGAGGCAGTTGTTACCTCTTGACTGGGTGGTCAAAACAAATGGTACTAGAAAAGTTGGAAGGTaGGGGTTTCCCATTCGACCA | + |
|
Preference number: 3 (lower is better) Translates to: LEKRQLLPLDWVVKTNGTRKVGR*GFPIRP Trigger: TGGTCGAATGGGAAACCCCAACCTTCCAACTTTTCT...AGTACCATTTGTTTTGACCACCCAGTCAAGAGGTAACAACTGCCTCTTCTCGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
||
| 3UTR TCA 72 bp | TTGGCTAAGGAAAGCATGGGGGCGAAAGGTCCGACGTaGAGAGAGAGAAAAAGAACAGAAACAGAAGACAAC | + |
|
Preference number: 3 (lower is better) Translates to: LAKESMGAKGPT*RERKRTETEDN Trigger: GTTGTCTTCTGTTTCTGTTCTTTTTCTCTCTCTTCACGTCGGACCTTTCGCCCCCATGCTTTCCTTAGCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| 3UTR-3UTR CAA 90 bp | GAAGTGGAAAATCCGGACGGTTGTCTCCACGTGTATCTTGAAATAGACACCGAGCGGTTTGTTGCTCCGTaGTATGCCTCAGTTTATTTT | + |
|
Preference number: 3 (lower is better) Translates to: EVENPDGCLHVYLEIDTERFVAP*YASVYF Trigger: AAAATAAACTGAGGCATACAACGGAGCAACAAACCG...CTCGGTGTCTATTTCAAGATACACGTGGAGACAACCGTCCGGATTTTCCACTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| 3UTR TCA 72 bp | ATGTATATCAGCAAAGGAGGGAAGCTCTTGTTTCTCTaGGCACTTGAGGCAGAGTCTGATGGTTTGAGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: MYISKGGKLLFL*ALEAESDGLRS Trigger: TGACCTCAAACCATCAGACTCTGCCTCAAGTGCTCAGAGAAACAAGAGCTTCCCTCCTTTGCTGATATACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| 3UTR TCA 72 bp | TGTTTCTCTGAGCACTTGAGGCAGAGTCTGATGGTTTaGGGTCATCAGTTCCTTCCCACAGAATGTATTACA | + |
|
Preference number: 3 (lower is better) Translates to: CFSEHLRQSLMV*GHQFLPTECIT Trigger: TGTAATACATTCTGTGGGAAGGAACTGATGACCTCAAACCATCAGACTCTGCCTCAAGTGCTCAGAGAAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGGCATCTAAGGGAGCCTACCTACCCAAGAATGACAGTTCTTATTTCATGTCGGTTTGTTGCTCCGTaGTATGCCTCAGTTTATTTT | + |
|
Preference number: 3 (lower is better) Translates to: SGHLREPTYPRMTVLISCRFVAP*YASVYF Trigger: AAAATAAACTGAGGCATACAACGGAGCAACAAACCG...ACATGAAATAAGAACTGTCATTCTTGGGTAGGTAGGCTCCCTTAGATGCCCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
||
| 3UTR-3UTR CAA 90 bp | CTCGAGAAGAGGCAGTTGTTACCTCTTGACTGGGTGGTCAAAACAAATGGTACTACTCACCTGTTTGGTTaGAAAACAAAACTCAAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LEKRQLLPLDWVVKTNGTTHLFG*KTKLKG Trigger: CCCTTTGAGTTTTGTTTTCAAACCAAACAGGTGAGT...AGTACCATTTGTTTTGACCACCCAGTCAAGAGGTAACAACTGCCTCTTCTCGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
||
| 3UTR CCA 72 bp | AGTTACTTCGTAGTTGGGATGAAAATTAAAGGTCTCTaGAGAGGGAATCCTCACCTAGGAACAAACTCCATG | + |
|
Preference number: 3 (lower is better) Translates to: SYFVVGMKIKGL*RGNPHLGTNSM Trigger: CATGGAGTTTGTTCCTAGGTGAGGATTCCCTCTCCAGAGACCTTTAATTTTCATCCCAACTACGAAGTAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| 3UTR TCA 72 bp | TCCAGGTTCTTGGACAAATGGGGTGGGCTTCTAAACTaGGGAAAGATGAGAATCTATAGTTCACACATGTAT | + |
|
Preference number: 3 (lower is better) Translates to: SRFLDKWGGLLN*GKMRIYSSHMY Trigger: ATACATGTGTGAACTATAGATTCTCATCTTTCCTCAGTTTAGAAGCCCACCCCATTTGTCCAAGAACCTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
||
| 3UTR TCA 72 bp | GTTGGGGTTTCCCATTCGACCAGTTTTCAAAGGTTATaGAATAATTGCTTAAGAGAAAGTTCCTGGCCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: VGVSHSTSFQRL*NNCLRESSWPR Trigger: CCTTGGCCAGGAACTTTCTCTTAAGCAATTATTTCATAACCTTTGAAAACTGGTCGAATGGGAAACCCCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| 3UTR CCA 72 bp | TTTTTATCTGTATTACTAAATTCGAAAGAACCGAAGTaGAAAATCCGGACGGTTGTCTCCACGTGTATCTTG | + |
|
Preference number: 3 (lower is better) Translates to: FLSVLLNSKEPK*KIRTVVSTCIL Trigger: CAAGATACACGTGGAGACAACCGTCCGGATTTTCCACTTCGGTTCTTTCGAATTTAGTAATACAGATAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
||
| CDS-3UTR TCA 90 bp | CAGCCAGTGGGGCGCCGCCCCTTTACCTACTCGGGAACCGGCCCTTCGCGGCTGCAGCGGCGGGGCGCTTaGGTAGGGTCCTTGGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: QPVGRRPFTYSGTGPSRLQRRGA*VGSLGH Trigger: GTGTCCCAAGGACCCTACTCAAGCGCCCCGCCGCTG...CAGCCGCGAAGGGCCGGTTCCCGAGTAGGTAAAGGGGCGGCGCCCCACTGGCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR TCA 90 bp | CAGCCAGTGGGGCGCCGCCCCTTTACCTACTCGGGAACCGGCCCTTCGCGGCTGCCGGCGTCCAGGCCGTaGTGTGCGGAATGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QPVGRRPFTYSGTGPSRLPASRP*CAECSS Trigger: GCTGCTGCATTCCGCACATCACGGCCTGGACGCCGG...CAGCCGCGAAGGGCCGGTTCCCGAGTAGGTAAAGGGGCGGCGCCCCACTGGCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR GCA 90 bp | CGCAGCAGCCAGTGGGGCGCCGCCCCTTTACCTACTCGGGAACCGGCCCTTCGCGGATGGGGCTGGGCCTaGTGTTTCCGATCGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RSSQWGAAPLPTREPALRGWGWA*CFRSVS Trigger: GGACACCGATCGGAAACAGCAGGCCCAGCCCCATCC...GCGAAGGGCCGGTTCCCGAGTAGGTAAAGGGGCGGCGCCCCACTGGCTGCTGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR GCA 90 bp | GCCTTAGCCCTTAGGGTGAGGCCGAGAGCAAGAAGGGCCTGTACGGCTCGCGCCACGCGTGGGGCGCGTTaGCCTGGGCCTTCCCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ALALRVRPRARRACTARATRGAR*PGPSPD Trigger: GTCTGGGGAAGGCCCAGGGCAACGCGCCCCACGCGT...GGCGCGAGCCGTACAGGCCCTTCTTGCTCTCGGCCTCACCCTAAGGGCTAAGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187754.7 |
||
| CDS-3UTR GCA 90 bp | GCGCCGCCCCTTTACCTACTCGGGAACCGGCCCTTCGCGGCTGCCTTAGCCCTTAGAGGCTGTCGCCCATaGCGGCGTCCAGGCCGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: APPLYLLGNRPFAAALALRGCRP*RRPGRD Trigger: ATCACGGCCTGGACGCCGGCATGGGCGACAGCCTCT...AAGGGCTAAGGCAGCCGCGAAGGGCCGGTTCCCGAGTAGGTAAAGGGGCGGCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR CCA 90 bp | GCGGCAAAATGGCTTTACAGAGCTCTGGCATCCCTCCCCCGCAGCAGCCAGTGGTCAAGGCCGGAGAGCTaGGGCAAGGCTGCCCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: AAKWLYRALASLPRSSQWSRPES*GKAARG Trigger: GCCCCGGGCAGCCTTGCCCCAGCTCTCCGGCCTTGA...CCACTGGCTGCTGCGGGGGAGGGATGCCAGAGCTCTGTAAAGCCATTTTGCCGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR CCA 90 bp | CAGCCAGTGGGGCGCCGCCCCTTTACCTACTCGGGAACCGGCCCTTCGCGGCTGTGCGTGAGACAGCTTTaGATGCCCGGCTCCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: QPVGRRPFTYSGTGPSRLCVRQL*MPGSRM Trigger: CATCCTGGAGCCGGGCATCCAAAGCTGTCTCACGCA...CAGCCGCGAAGGGCCGGTTCCCGAGTAGGTAAAGGGGCGGCGCCCCACTGGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR TCA 90 bp | CAGCCAGTGGGGCGCCGCCCCTTTACCTACTCGGGAACCGGCCCTTCGCGGCTGATCGGTGTCCGGTCCTaGGCCAGCAGATCCGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QPVGRRPFTYSGTGPSRLIGVRS*ASRSVN Trigger: ATTTACGGATCTGCTGGCTCAGGACCGGACACCGAT...CAGCCGCGAAGGGCCGGTTCCCGAGTAGGTAAAGGGGCGGCGCCCCACTGGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR CCA 90 bp | GCCTTAGCCCTTAGGGTGAGGCCGAGAGCAAGAAGGGCCTGTACGGCTCGCGCCGCTCCAGGATGGGGCTaGGCCTGCTGTTTCCGATCG | + |
|
Preference number: 4 (lower is better) Translates to: ALALRVRPRARRACTARAAPGWG*ACCFRS Trigger: CGATCGGAAACAGCAGGCCCAGCCCCATCCTGGAGC...GGCGCGAGCCGTACAGGCCCTTCTTGCTCTCGGCCTCACCCTAAGGGCTAAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR CCA 90 bp | GCGGCAAAATGGCTTTACAGAGCTCTGGCATCCCTCCCCCGCAGCAGCCAGTGGTGGGGCGCGTTGCCCTaGGCCTTCCCCAGACGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AAKWLYRALASLPRSSQWWGALP*AFPRRV Trigger: CACACGTCTGGGGAAGGCCCAGGGCAACGCGCCCCA...CCACTGGCTGCTGCGGGGGAGGGATGCCAGAGCTCTGTAAAGCCATTTTGCCGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000187754.7 |
||
| CDS-3UTR GCA 90 bp | GCGGCAAAATGGCTTTACAGAGCTCTGGCATCCCTCCCCCGCAGCAGCCAGTGGCCCACTTCTTGGCGTTaGCGTTGCCCCCACGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: AAKWLYRALASLPRSSQWPTSWR*RCPHGC Trigger: GCACCCGTGGGGGCAACGGCAACGCCAAGAAGTGGG...CCACTGGCTGCTGCGGGGGAGGGATGCCAGAGCTCTGTAAAGCCATTTTGCCGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR GCA 90 bp | GCCTTAGCCCTTAGGGTGAGGCCGAGAGCAAGAAGGGCCTGTACGGCTCGCGCCGCCGCCCAGGAGAGATaGATTGAGGCATTCAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ALALRVRPRARRACTARAAAQER*IEAFRG Trigger: CCCCCTGAATGCCTCAATGCATCTCTCCTGGGCGGC...GGCGCGAGCCGTACAGGCCCTTCTTGCTCTCGGCCTCACCCTAAGGGCTAAGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR CCA 90 bp | GCCTTAGCCCTTAGGGTGAGGCCGAGAGCAAGAAGGGCCTGTACGGCTCGCGCCTCTCGAGCTATGGCTTaGGACGCCATCGTGCCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ALALRVRPRARRACTARASRAMA*DAIVPV Trigger: GACCGGCACGATGGCGTCCCAAGCCATAGCTCGAGA...GGCGCGAGCCGTACAGGCCCTTCTTGCTCTCGGCCTCACCCTAAGGGCTAAGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR TCA 90 bp | GCCTTAGCCCTTAGGGTGAGGCCGAGAGCAAGAAGGGCCTGTACGGCTCGCGCCCTCGCCGGTGTTGACTaGCATTCCTCCCAAGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ALALRVRPRARRACTARALAGVD*HSSQEA Trigger: GGCTTCTTGGGAGGAATGTCAGTCAACACCGGCGAG...GGCGCGAGCCGTACAGGCCCTTCTTGCTCTCGGCCTCACCCTAAGGGCTAAGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR TCA 90 bp | GCCTTAGCCCTTAGGGTGAGGCCGAGAGCAAGAAGGGCCTGTACGGCTCGCGCCCCAGGAGAGATGCATTaGGGCATTCAGGGGGCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ALALRVRPRARRACTARAPGEMH*GIQGAR Trigger: TCTCGCCCCCTGAATGCCTCAATGCATCTCTCCTGG...GGCGCGAGCCGTACAGGCCCTTCTTGCTCTCGGCCTCACCCTAAGGGCTAAGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR GCA 90 bp | GCGGCAAAATGGCTTTACAGAGCTCTGGCATCCCTCCCCCGCAGCAGCCAGTGGACTGCACGTCTTCCATaGCGGGATGCCCAAGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: AAKWLYRALASLPRSSQWTARLP*RDAQGR Trigger: ACGGCCTTGGGCATCCCGGCATGGAAGACGTGCAGT...CCACTGGCTGCTGCGGGGGAGGGATGCCAGAGCTCTGTAAAGCCATTTTGCCGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR TCA 90 bp | GCCTTAGCCCTTAGGGTGAGGCCGAGAGCAAGAAGGGCCTGTACGGCTCGCGCCATACCTCGCCGGTGTTaGCTGACATTCCTCCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ALALRVRPRARRACTARAIPRRC*LTFLPR Trigger: TCTTGGGAGGAATGTCAGTCAACACCGGCGAGGTAT...GGCGCGAGCCGTACAGGCCCTTCTTGCTCTCGGCCTCACCCTAAGGGCTAAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR TCA 90 bp | GCGGCAAAATGGCTTTACAGAGCTCTGGCATCCCTCCCCCGCAGCAGCCAGTGGCCAGGAGAGATGCATTaGGGCATTCAGGGGGCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AAKWLYRALASLPRSSQWPGEMH*GIQGAR Trigger: TCTCGCCCCCTGAATGCCTCAATGCATCTCTCCTGG...CCACTGGCTGCTGCGGGGGAGGGATGCCAGAGCTCTGTAAAGCCATTTTGCCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR GCA 90 bp | GCCTTAGCCCTTAGGGTGAGGCCGAGAGCAAGAAGGGCCTGTACGGCTCGCGCCTTGCTGCTTTGCGCCTaGCCGCGGGTAAATTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: ALALRVRPRARRACTARALLLCA*PRVNSN Trigger: GTTTGAATTTACCCGCGGGCAGGCGCAAAGCAGCAA...GGCGCGAGCCGTACAGGCCCTTCTTGCTCTCGGCCTCACCCTAAGGGCTAAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR GCA 90 bp | GCGCCGCCCCTTTACCTACTCGGGAACCGGCCCTTCGCGGCTGCCTTAGCCCTTATATTCTTTCTGGAGTaGAGGTCACTGGGGTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: APPLYLLGNRPFAAALALIFFLE*RSLGSV Trigger: CACGGACCCCAGTGACCTGCACTCCAGAAAGAATAT...AAGGGCTAAGGCAGCCGCGAAGGGCCGGTTCCCGAGTAGGTAAAGGGGCGGCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR CCA 90 bp | ACAGAAACAGAAGACAACCCCGGAGATGGGGGAGGGAAGCCTCAAGCCAGGTCTTCCGATGATGGCGTGTaGGACAGCGGCGGGGCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TETEDNPGDGGGKPQARSSDDGV*DSGGAL Trigger: AAGCGCCCCGCCGCTGTCCCACACGCCATCATCGGA...AGACCTGGCTTGAGGCTTCCCTCCCCCATCTCCGGGGTTGTCTTCTGTTTCTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR CCA 90 bp | TCCAGCAGTCACCGGCCTACGCTTCAGTCTTTAGCTATTTGGTTTTGGACCCCCTCAAGGCCGGAGAGCTaGGGCAAGGCTGCCCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSSHRPTLQSLAIWFWTPSRPES*GKAARG Trigger: GCCCCGGGCAGCCTTGCCCCAGCTCTCCGGCCTTGA...GGGGGTCCAAAACCAAATAGCTAAAGACTGAAGCGTAGGCCGGTGACTGCTGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR TCA 90 bp | CAAGAAGGGCCTGTACGGCTCGCGCCCTCAGCAGCTGCTGATTCTATGTCCTCAGAGAGAGCCGGCTTCTaGGCCCACTTCTTGGCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QEGPVRLAPSAAADSMSSERAGF*AHFLAL Trigger: CAACGCCAAGAAGTGGGCTCAGAAGCCGGCTCTCTC...TGAGGACATAGAATCAGCAGCTGCTGAGGGCGCGAGCCGTACAGGCCCTTCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR GCA 90 bp | ACAGAAACAGAAGACAACCCCGGAGATGGGGGAGGGAAGCCTCAAGCCAGGTCTGGATGGGGCTGGGCCTaGTGTTTCCGATCGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TETEDNPGDGGGKPQARSGWGWA*CFRSVS Trigger: GGACACCGATCGGAAACAGCAGGCCCAGCCCCATCC...AGACCTGGCTTGAGGCTTCCCTCCCCCATCTCCGGGGTTGTCTTCTGTTTCTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR CCA 90 bp | ACAGAAACAGAAGACAACCCCGGAGATGGGGGAGGGAAGCCTCAAGCCAGGTCTGCTCCAGGATGGGGCTaGGCCTGCTGTTTCCGATCG | + |
|
Preference number: 4 (lower is better) Translates to: TETEDNPGDGGGKPQARSAPGWG*ACCFRS Trigger: CGATCGGAAACAGCAGGCCCAGCCCCATCCTGGAGC...AGACCTGGCTTGAGGCTTCCCTCCCCCATCTCCGGGGTTGTCTTCTGTTTCTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR TCA 90 bp | TGGGGGAACTCCAGCAGTCACCGGCCTACGCTTCAGTCTTTAGCTATTTGGTTTCCGGCGTCCAGGCCGTaGTGTGCGGAATGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WGNSSSHRPTLQSLAIWFPASRP*CAECSS Trigger: GCTGCTGCATTCCGCACATCACGGCCTGGACGCCGG...AAACCAAATAGCTAAAGACTGAAGCGTAGGCCGGTGACTGCTGGAGTTCCCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR TCA 90 bp | TTCGCTGATGCTCACAGGAACATCAGGGCATCTAAGGGAGCCTACCTACCCAAGAGTTCTGCAGGGCCGTaGGCGCAGCGCAAATGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: FADAHRNIRASKGAYLPKSSAGP*AQRKWP Trigger: CGGCCATTTGCGCTGCGCTCACGGCCCTGCAGAACT...CTTGGGTAGGTAGGCTCCCTTAGATGCCCTGATGTTCCTGTGAGCATCAGCGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR TCA 90 bp | GCCCCTTCGCTGATGCTCACAGGAACATCAGGGCATCTAAGGGAGCCTACCTACCTCGCCGGTGTTGACTaGCATTCCTCCCAAGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: APSLMLTGTSGHLREPTYLAGVD*HSSQEA Trigger: GGCTTCTTGGGAGGAATGTCAGTCAACACCGGCGAG...GTAGGTAGGCTCCCTTAGATGCCCTGATGTTCCTGTGAGCATCAGCGAAGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR TCA 90 bp | CAAGAAGGGCCTGTACGGCTCGCGCCCTCAGCAGCTGCTGATTCTATGTCCTCAATCGGTGTCCGGTCCTaGGCCAGCAGATCCGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QEGPVRLAPSAAADSMSSIGVRS*ASRSVN Trigger: ATTTACGGATCTGCTGGCTCAGGACCGGACACCGAT...TGAGGACATAGAATCAGCAGCTGCTGAGGGCGCGAGCCGTACAGGCCCTTCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR TCA 90 bp | CAAGAAGGGCCTGTACGGCTCGCGCCCTCAGCAGCTGCTGATTCTATGTCCTCAATACCTCGCCGGTGTTaGCTGACATTCCTCCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QEGPVRLAPSAAADSMSSIPRRC*LTFLPR Trigger: TCTTGGGAGGAATGTCAGTCAACACCGGCGAGGTAT...TGAGGACATAGAATCAGCAGCTGCTGAGGGCGCGAGCCGTACAGGCCCTTCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR GCA 90 bp | AATCCGGACGGTTGTCTCCACGTGTATCTTGAAATAGACACCGAGAGCCGGTTTAGAGGCTGTCGCCCATaGCGGCGTCCAGGCCGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: NPDGCLHVYLEIDTESRFRGCRP*RRPGRD Trigger: ATCACGGCCTGGACGCCGGCATGGGCGACAGCCTCT...AAACCGGCTCTCGGTGTCTATTTCAAGATACACGTGGAGACAACCGTCCGGATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR CCA 90 bp | TCCAGCAGTCACCGGCCTACGCTTCAGTCTTTAGCTATTTGGTTTTGGACCCCCTCTGAGCCCACTTCTTaGCGTTGCCGTTGCCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSSHRPTLQSLAIWFWTPSEPTS*RCRCPH Trigger: GTGGGGGCAACGGCAACGCCAAGAAGTGGGCTCAGA...GGGGGTCCAAAACCAAATAGCTAAAGACTGAAGCGTAGGCCGGTGACTGCTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR CCA 90 bp | AGAACCGAAGTGGAAAATCCGGACGGTTGTCTCCACGTGTATCTTGAAATAGACTCAAGGCCGGAGAGCTaGGGCAAGGCTGCCCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RTEVENPDGCLHVYLEIDSRPES*GKAARG Trigger: GCCCCGGGCAGCCTTGCCCCAGCTCTCCGGCCTTGA...GTCTATTTCAAGATACACGTGGAGACAACCGTCCGGATTTTCCACTTCGGTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| 3UTR CAA 72 bp | CCATCGCGTCTCTCGATGTCACACGCGTGGGGCGCGTaGCCCTGCAAGGAAAGGAGACGATGTTTTTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: PSRLSMSHAWGA*PCKERRRCFSM Trigger: CATTGAAAAACATCGTCTCCTTTCCTTGCAGGGCAACGCGCCCCACGCGTGTGACATCGAGAGACGCGATGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
||
| CDS-3UTR TCA 90 bp | CTTCAAAAGCCCGTTGAGCTCTTTATATGGGGGTGGAGAAAGCTATGGAAGAAGCAGCGGCGGGGCGCTTaGGTAGGGTCCTTGGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: LQKPVELFIWGWRKLWKKQRRGA*VGSLGH Trigger: GTGTCCCAAGGACCCTACTCAAGCGCCCCGCCGCTG...CTTCTTCCATAGCTTTCTCCACCCCCATATAAAGAGCTCAACGGGCTTTTGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR TCA 90 bp | CTAAATTCGAAAGAACCGAAGTGGAAAATCCGGACGGTTGTCTCCACGTGTATCCCGGCGTCCAGGCCGTaGTGTGCGGAATGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LNSKEPKWKIRTVVSTCIPASRP*CAECSS Trigger: GCTGCTGCATTCCGCACATCACGGCCTGGACGCCGG...GATACACGTGGAGACAACCGTCCGGATTTTCCACTTCGGTTCTTTCGAATTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR TCA 90 bp | GCGGCAAAATGGCTTTACAGAGCTCTGGCATCCCTCCCCCGCAGCAGCCAGTGGGAACTTCGCCCACAGTaGCTTTGTACTTTGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: AAKWLYRALASLPRSSQWELRPQ*LCTLKL Trigger: CAACTTCAAAGTACAAAGTCACTGTGGGCGAAGTTC...CCACTGGCTGCTGCGGGGGAGGGATGCCAGAGCTCTGTAAAGCCATTTTGCCGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR GCA 90 bp | TGGGGGAACTCCAGCAGTCACCGGCCTACGCTTCAGTCTTTAGCTATTTGGTTTGTCCAGGCCGTGATGTaGGGAATGCAGCAGCACGTC | + |
|
Preference number: 4 (lower is better) Translates to: WGNSSSHRPTLQSLAIWFVQAVM*GMQQHV Trigger: GACGTGCTGCTGCATTCCGCACATCACGGCCTGGAC...AAACCAAATAGCTAAAGACTGAAGCGTAGGCCGGTGACTGCTGGAGTTCCCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR GCA 90 bp | TGGGGGAACTCCAGCAGTCACCGGCCTACGCTTCAGTCTTTAGCTATTTGGTTTGGGGCACCGAAGCCGTaGGTGATGAGACTGAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: WGNSSSHRPTLQSLAIWFGAPKP*VMRLKC Trigger: GCACTTCAGTCTCATCACGCACGGCTTCGGTGCCCC...AAACCAAATAGCTAAAGACTGAAGCGTAGGCCGGTGACTGCTGGAGTTCCCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| 3UTR CAA 72 bp | ATTCTGCAGTGTCCCGCCCCTGCTGGAATTCCTGCGTaGAGGTGTGTTAGCAAGAAATCCAAAGCCGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ILQCPAPAGIPA*RCVSKKSKAAP Trigger: GGGAGCGGCTTTGGATTTCTTGCTAACACACCTCAACGCAGGAATTCCAGCAGGGGCGGGACACTGCAGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
||
| 3UTR CAA 72 bp | TCACCGGCCTACGCTTCAGTCTTTAGCTATTTGGTTTaGGACCCCCGGCATTTGGTAGGGCTTGGGGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SPAYASVFSYLV*DPRHLVGLGGG Trigger: ACCACCCCCAAGCCCTACCAAATGCCGGGGGTCCAAAACCAAATAGCTAAAGACTGAAGCGTAGGCCGGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR TCA 90 bp | GAAATAGACACCGAGAGCCGGTTTGTTGCTCCGTTGTATGCCTCAGTTTATTTTCAGCGGCGGGGCGCTTaGGTAGGGTCCTTGGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: EIDTESRFVAPLYASVYFQRRGA*VGSLGH Trigger: GTGTCCCAAGGACCCTACTCAAGCGCCCCGCCGCTG...AAAATAAACTGAGGCATACAACGGAGCAACAAACCGGCTCTCGGTGTCTATTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR TCA 90 bp | CTAAATTCGAAAGAACCGAAGTGGAAAATCCGGACGGTTGTCTCCACGTGTATCAGTTCTGCAGGGCCGTaGGCGCAGCGCAAATGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LNSKEPKWKIRTVVSTCISSAGP*AQRKWP Trigger: CGGCCATTTGCGCTGCGCTCACGGCCCTGCAGAACT...GATACACGTGGAGACAACCGTCCGGATTTTCCACTTCGGTTCTTTCGAATTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR GCA 90 bp | AGAACCGAAGTGGAAAATCCGGACGGTTGTCTCCACGTGTATCTTGAAATAGACCCCACTTCTTGGCGTTaGCGTTGCCCCCACGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RTEVENPDGCLHVYLEIDPTSWR*RCPHGC Trigger: GCACCCGTGGGGGCAACGGCAACGCCAAGAAGTGGG...GTCTATTTCAAGATACACGTGGAGACAACCGTCCGGATTTTCCACTTCGGTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR CCA 90 bp | ACAGAAACAGAAGACAACCCCGGAGATGGGGGAGGGAAGCCTCAAGCCAGGTCTGCAGCATATTCTTTCTaGAGTGCAGGTCACTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TETEDNPGDGGGKPQARSAAYSF*SAGHWG Trigger: ACCCCAGTGACCTGCACTCCAGAAAGAATATGCTGC...AGACCTGGCTTGAGGCTTCCCTCCCCCATCTCCGGGGTTGTCTTCTGTTTCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR TCA 90 bp | TCAGGGCATCTAAGGGAGCCTACCTACCCAAGAATGACAGTTCTTATTTCATGTAGTTCTGCAGGGCCGTaGGCGCAGCGCAAATGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SGHLREPTYPRMTVLISCSSAGP*AQRKWP Trigger: CGGCCATTTGCGCTGCGCTCACGGCCCTGCAGAACT...ACATGAAATAAGAACTGTCATTCTTGGGTAGGTAGGCTCCCTTAGATGCCCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR GCA 90 bp | ATCTTCAAAAGCCCGTTGAGCTCTTTATATGGGGGTGGAGAAAGCTATGGAAGACCCACTTCTTGGCGTTaGCGTTGCCCCCACGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: IFKSPLSSLYGGGESYGRPTSWR*RCPHGC Trigger: GCACCCGTGGGGGCAACGGCAACGCCAAGAAGTGGG...TCTTCCATAGCTTTCTCCACCCCCATATAAAGAGCTCAACGGGCTTTTGAAGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR GCA 90 bp | CTAAATTCGAAAGAACCGAAGTGGAAAATCCGGACGGTTGTCTCCACGTGTATCGGATGGGGCTGGGCCTaGTGTTTCCGATCGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LNSKEPKWKIRTVVSTCIGWGWA*CFRSVS Trigger: GGACACCGATCGGAAACAGCAGGCCCAGCCCCATCC...GATACACGTGGAGACAACCGTCCGGATTTTCCACTTCGGTTCTTTCGAATTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR CCA 90 bp | GAAATAGACACCGAGAGCCGGTTTGTTGCTCCGTTGTATGCCTCAGTTTATTTTTCCGATGATGGCGTGTaGGACAGCGGCGGGGCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: EIDTESRFVAPLYASVYFSDDGV*DSGGAL Trigger: AAGCGCCCCGCCGCTGTCCCACACGCCATCATCGGA...AAAATAAACTGAGGCATACAACGGAGCAACAAACCGGCTCTCGGTGTCTATTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR CCA 90 bp | AGAAGGGGCTCCAAGGACCTTGGGGGAACTCCAGCAGTCACCGGCCTACGCTTCTTTTTAATGACTGACTaGTCCAATAGGTTCATGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RRGSKDLGGTPAVTGLRFFLMTD*SNRFMP Trigger: CGGCATGAACCTATTGGACCAGTCAGTCATTAAAAA...GAAGCGTAGGCCGGTGACTGCTGGAGTTCCCCCAAGGTCCTTGGAGCCCCTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR GCA 90 bp | AATTCGAAAGAACCGAAGTGGAAAATCCGGACGGTTGTCTCCACGTGTATCTTGGTCCAGGCCGTGATGTaGGGAATGCAGCAGCACGTC | + |
|
Preference number: 4 (lower is better) Translates to: NSKEPKWKIRTVVSTCILVQAVM*GMQQHV Trigger: GACGTGCTGCTGCATTCCGCACATCACGGCCTGGAC...CAAGATACACGTGGAGACAACCGTCCGGATTTTCCACTTCGGTTCTTTCGAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR GCA 90 bp | AATTCGAAAGAACCGAAGTGGAAAATCCGGACGGTTGTCTCCACGTGTATCTTGACTGCACGTCTTCCATaGCGGGATGCCCAAGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: NSKEPKWKIRTVVSTCILTARLP*RDAQGR Trigger: ACGGCCTTGGGCATCCCGGCATGGAAGACGTGCAGT...CAAGATACACGTGGAGACAACCGTCCGGATTTTCCACTTCGGTTCTTTCGAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR GCA 90 bp | AATTCGAAAGAACCGAAGTGGAAAATCCGGACGGTTGTCTCCACGTGTATCTTGGCCGCCCAGGAGAGATaGATTGAGGCATTCAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NSKEPKWKIRTVVSTCILAAQER*IEAFRG Trigger: CCCCCTGAATGCCTCAATGCATCTCTCCTGGGCGGC...CAAGATACACGTGGAGACAACCGTCCGGATTTTCCACTTCGGTTCTTTCGAATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR GCA 90 bp | CCGGACGGTTGTCTCCACGTGTATCTTGAAATAGACACCGAGAGCCGGTTTGTTTTGCTGCTTTGCGCCTaGCCGCGGGTAAATTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PDGCLHVYLEIDTESRFVLLLCA*PRVNSN Trigger: GTTTGAATTTACCCGCGGGCAGGCGCAAAGCAGCAA...AACAAACCGGCTCTCGGTGTCTATTTCAAGATACACGTGGAGACAACCGTCCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR GCA 90 bp | TCCAGCAGTCACCGGCCTACGCTTCAGTCTTTAGCTATTTGGTTTTGGACCCCCATATTCTTTCTGGAGTaGAGGTCACTGGGGTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSSHRPTLQSLAIWFWTPIFFLE*RSLGSV Trigger: CACGGACCCCAGTGACCTGCACTCCAGAAAGAATAT...GGGGGTCCAAAACCAAATAGCTAAAGACTGAAGCGTAGGCCGGTGACTGCTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR GCA 90 bp | AATTCGAAAGAACCGAAGTGGAAAATCCGGACGGTTGTCTCCACGTGTATCTTGGGGGCACCGAAGCCGTaGGTGATGAGACTGAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: NSKEPKWKIRTVVSTCILGAPKP*VMRLKC Trigger: GCACTTCAGTCTCATCACGCACGGCTTCGGTGCCCC...CAAGATACACGTGGAGACAACCGTCCGGATTTTCCACTTCGGTTCTTTCGAATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR GCA 90 bp | TGGGGGAACTCCAGCAGTCACCGGCCTACGCTTCAGTCTTTAGCTATTTGGTTTCCTTCCCCAGACGTGTaGCTGTTAGTGGTGTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: WGNSSSHRPTLQSLAIWFPSPDV*LLVVLF Trigger: GAACAACACCACTAACAGGCACACGTCTGGGGAAGG...AAACCAAATAGCTAAAGACTGAAGCGTAGGCCGGTGACTGCTGGAGTTCCCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR CCA 90 bp | CATTTTCTAAAAGGAACCAAGATGAATCAACTTATCGGTTTCCTCTCTGCCGCGTCCGATGATGGCGTGTaGGACAGCGGCGGGGCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HFLKGTKMNQLIGFLSAASDDGV*DSGGAL Trigger: AAGCGCCCCGCCGCTGTCCCACACGCCATCATCGGA...CGCGGCAGAGAGGAAACCGATAAGTTGATTCATCTTGGTTCCTTTTAGAAAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
||
| CDS-3UTR CCA 90 bp | CTTCAAAAGCCCGTTGAGCTCTTTATATGGGGGTGGAGAAAGCTATGGAAGAAGTCTGAGCCCACTTCTTaGCGTTGCCGTTGCCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LQKPVELFIWGWRKLWKKSEPTS*RCRCPH Trigger: GTGGGGGCAACGGCAACGCCAAGAAGTGGGCTCAGA...CTTCTTCCATAGCTTTCTCCACCCCCATATAAAGAGCTCAACGGGCTTTTGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR CCA 90 bp | ACAGAAACAGAAGACAACCCCGGAGATGGGGGAGGGAAGCCTCAAGCCAGGTCTTCATGCCGCTGTTATTaGCATCTTCAACTGACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TETEDNPGDGGGKPQARSSCRCY*HLQLTA Trigger: TGCAGTCAGTTGAAGATGCCAATAACAGCGGCATGA...AGACCTGGCTTGAGGCTTCCCTCCCCCATCTCCGGGGTTGTCTTCTGTTTCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR CCA 90 bp | CAAGAAGGGCCTGTACGGCTCGCGCCCTCAGCAGCTGCTGATTCTATGTCCTCAGAGAAGTCACAGATTTaGGAGGGACAGGAACTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QEGPVRLAPSAAADSMSSEKSQI*EGQELF Trigger: AAAAAGTTCCTGTCCCTCCCAAATCTGTGACTTCTC...TGAGGACATAGAATCAGCAGCTGCTGAGGGCGCGAGCCGTACAGGCCCTTCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR CCA 90 bp | GAAATAGACACCGAGAGCCGGTTTGTTGCTCCGTTGTATGCCTCAGTTTATTTTGCTCCAGGATGGGGCTaGGCCTGCTGTTTCCGATCG | + |
|
Preference number: 4 (lower is better) Translates to: EIDTESRFVAPLYASVYFAPGWG*ACCFRS Trigger: CGATCGGAAACAGCAGGCCCAGCCCCATCCTGGAGC...AAAATAAACTGAGGCATACAACGGAGCAACAAACCGGCTCTCGGTGTCTATTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR CCA 90 bp | AATCCGGACGGTTGTCTCCACGTGTATCTTGAAATAGACACCGAGAGCCGGTTTGCCAGTTTTACTACCTaGGCCTTCCCCAGACGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: NPDGCLHVYLEIDTESRFASFTT*AFPRRV Trigger: CACACGTCTGGGGAAGGCCCAGGTAGTAAAACTGGC...AAACCGGCTCTCGGTGTCTATTTCAAGATACACGTGGAGACAACCGTCCGGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR GCA 90 bp | ACCTCAATTTTTGTTTACAACCTTCATCCTTTGAGCGATTCCCTCAGAGGGTCCACTGCACGTCTTCCATaGCGGGATGCCCAAGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: TSIFVYNLHPLSDSLRGSTARLP*RDAQGR Trigger: ACGGCCTTGGGCATCCCGGCATGGAAGACGTGCAGT...GGACCCTCTGAGGGAATCGCTCAAAGGATGAAGGTTGTAAACAAAAATTGAGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
||
| CDS-3UTR GCA 90 bp | AAATTCGAAAGAACCGAAGTGGAAAATCCGGACGGTTGTCTCCACGTGTATCTTGCCGCCCAGGAGAGATaGATTGAGGCATTCAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KFERTEVENPDGCLHVYLAAQER*IEAFRG Trigger: CCCCCTGAATGCCTCAATGCATCTCTCCTGGGCGGC...AAGATACACGTGGAGACAACCGTCCGGATTTTCCACTTCGGTTCTTTCGAATTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR GCA 90 bp | TGGGGGAACTCCAGCAGTCACCGGCCTACGCTTCAGTCTTTAGCTATTTGGTTTTCACTGGGGTCCGTGTaGTGTCTGTTCAAATACTCG | + |
|
Preference number: 4 (lower is better) Translates to: WGNSSSHRPTLQSLAIWFSLGSV*CLFKYS Trigger: CGAGTATTTGAACAGACAGCACACGGACCCCAGTGA...AAACCAAATAGCTAAAGACTGAAGCGTAGGCCGGTGACTGCTGGAGTTCCCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR GCA 90 bp | TTCGCTGATGCTCACAGGAACATCAGGGCATCTAAGGGAGCCTACCTACCCAAGGTGATGAGACTGAAGTaGGTGAGACAGCTTTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: FADAHRNIRASKGAYLPKVMRLK*VRQLWM Trigger: CATCCAAAGCTGTCTCACGCACTTCAGTCTCATCAC...CTTGGGTAGGTAGGCTCCCTTAGATGCCCTGATGTTCCTGTGAGCATCAGCGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR GCA 90 bp | CATCTAAGGGAGCCTACCTACCCAAGAATGACAGTTCTTATTTCATGTCCACACGGGGCACCGAAGCCGTaGGTGATGAGACTGAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: HLREPTYPRMTVLISCPHGAPKP*VMRLKC Trigger: GCACTTCAGTCTCATCACGCACGGCTTCGGTGCCCC...GTGTGGACATGAAATAAGAACTGTCATTCTTGGGTAGGTAGGCTCCCTTAGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR CCA 90 bp | AAATTCGAAAGAACCGAAGTGGAAAATCCGGACGGTTGTCTCCACGTGTATCTTTCTCGAGCTATGGCTTaGGACGCCATCGTGCCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KFERTEVENPDGCLHVYLSRAMA*DAIVPV Trigger: GACCGGCACGATGGCGTCCCAAGCCATAGCTCGAGA...AAGATACACGTGGAGACAACCGTCCGGATTTTCCACTTCGGTTCTTTCGAATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR CCA 90 bp | TCAGGGCATCTAAGGGAGCCTACCTACCCAAGAATGACAGTTCTTATTTCATGTTCTCGAGCTATGGCTTaGGACGCCATCGTGCCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SGHLREPTYPRMTVLISCSRAMA*DAIVPV Trigger: GACCGGCACGATGGCGTCCCAAGCCATAGCTCGAGA...ACATGAAATAAGAACTGTCATTCTTGGGTAGGTAGGCTCCCTTAGATGCCCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR CCA 90 bp | AAATTCGAAAGAACCGAAGTGGAAAATCCGGACGGTTGTCTCCACGTGTATCTTTCTGAGCCCACTTCTTaGCGTTGCCGTTGCCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KFERTEVENPDGCLHVYLSEPTS*RCRCPH Trigger: GTGGGGGCAACGGCAACGCCAAGAAGTGGGCTCAGA...AAGATACACGTGGAGACAACCGTCCGGATTTTCCACTTCGGTTCTTTCGAATTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR CCA 90 bp | GGGATGAAAATTAAAGGTCTCTGGAGAGGGAATCCTCACCTAGGAACAAACTCCTGGAGTGCAGGTCACTaGGGTCCGTGTGCTGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GMKIKGLWRGNPHLGTNSWSAGH*GPCAVC Trigger: ACAGACAGCACACGGACCCCAGTGACCTGCACTCCA...GGAGTTTGTTCCTAGGTGAGGATTCCCTCTCCAGAGACCTTTAATTTTCATCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR CCA 90 bp | CTTCAAAAGCCCGTTGAGCTCTTTATATGGGGGTGGAGAAAGCTATGGAAGAAGTGGAGTGCAGGTCACTaGGGTCCGTGTGCTGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LQKPVELFIWGWRKLWKKWSAGH*GPCAVC Trigger: ACAGACAGCACACGGACCCCAGTGACCTGCACTCCA...CTTCTTCCATAGCTTTCTCCACCCCCATATAAAGAGCTCAACGGGCTTTTGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR CCA 90 bp | CCGGACGGTTGTCTCCACGTGTATCTTGAAATAGACACCGAGAGCCGGTTTGTTGCAGCATATTCTTTCTaGAGTGCAGGTCACTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PDGCLHVYLEIDTESRFVAAYSF*SAGHWG Trigger: ACCCCAGTGACCTGCACTCCAGAAAGAATATGCTGC...AACAAACCGGCTCTCGGTGTCTATTTCAAGATACACGTGGAGACAACCGTCCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR CCA 90 bp | AGAACCGAAGTGGAAAATCCGGACGGTTGTCTCCACGTGTATCTTGAAATAGACTGCGTGAGACAGCTTTaGATGCCCGGCTCCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: RTEVENPDGCLHVYLEIDCVRQL*MPGSRM Trigger: CATCCTGGAGCCGGGCATCCAAAGCTGTCTCACGCA...GTCTATTTCAAGATACACGTGGAGACAACCGTCCGGATTTTCCACTTCGGTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR TCA 90 bp | TTCGCTGATGCTCACAGGAACATCAGGGCATCTAAGGGAGCCTACCTACCCAAGAGATGTCTTCGTACTTaGCATTCTCCACGAGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FADAHRNIRASKGAYLPKRCLRT*HSPRVS Trigger: GGAAACTCGTGGAGAATGTCAAGTACGAAGACATCT...CTTGGGTAGGTAGGCTCCCTTAGATGCCCTGATGTTCCTGTGAGCATCAGCGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR TCA 90 bp | AAATTCGAAAGAACCGAAGTGGAAAATCCGGACGGTTGTCTCCACGTGTATCTTCTCGCCGGTGTTGACTaGCATTCCTCCCAAGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KFERTEVENPDGCLHVYLLAGVD*HSSQEA Trigger: GGCTTCTTGGGAGGAATGTCAGTCAACACCGGCGAG...AAGATACACGTGGAGACAACCGTCCGGATTTTCCACTTCGGTTCTTTCGAATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR TCA 90 bp | GAAATAGACACCGAGAGCCGGTTTGTTGCTCCGTTGTATGCCTCAGTTTATTTTCCAGGAGAGATGCATTaGGGCATTCAGGGGGCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: EIDTESRFVAPLYASVYFPGEMH*GIQGAR Trigger: TCTCGCCCCCTGAATGCCTCAATGCATCTCTCCTGG...AAAATAAACTGAGGCATACAACGGAGCAACAAACCGGCTCTCGGTGTCTATTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR TCA 90 bp | TTCGAAAGAACCGAAGTGGAAAATCCGGACGGTTGTCTCCACGTGTATCTTGAAATCGGTGTCCGGTCCTaGGCCAGCAGATCCGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: FERTEVENPDGCLHVYLEIGVRS*ASRSVN Trigger: ATTTACGGATCTGCTGGCTCAGGACCGGACACCGAT...TTCAAGATACACGTGGAGACAACCGTCCGGATTTTCCACTTCGGTTCTTTCGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR CCA 90 bp | AAATTCGAAAGAACCGAAGTGGAAAATCCGGACGGTTGTCTCCACGTGTATCTTTGGAGTGCAGGTCACTaGGGTCCGTGTGCTGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KFERTEVENPDGCLHVYLWSAGH*GPCAVC Trigger: ACAGACAGCACACGGACCCCAGTGACCTGCACTCCA...AAGATACACGTGGAGACAACCGTCCGGATTTTCCACTTCGGTTCTTTCGAATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR CCA 90 bp | TTCAGTGGCCCACATGTTCCCAGGACCTGCACAGTAAGAGCAAGGCGCATCCATTACAAAGTTGCTTGGTaGCCAGCAGCATATTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FSGPHVPRTCTVRARRIHYKVAW*PAAYSF Trigger: GAAAGAATATGCTGCTGGCCACCAAGCAACTTTGTA...ATGGATGCGCCTTGCTCTTACTGTGCAGGTCCTGGGAACATGTGGGCCACTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR CCA 90 bp | CTAAATTCGAAAGAACCGAAGTGGAAAATCCGGACGGTTGTCTCCACGTGTATCGCCAGTTTTACTACCTaGGCCTTCCCCAGACGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LNSKEPKWKIRTVVSTCIASFTT*AFPRRV Trigger: CACACGTCTGGGGAAGGCCCAGGTAGTAAAACTGGC...GATACACGTGGAGACAACCGTCCGGATTTTCCACTTCGGTTCTTTCGAATTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| 3UTR CAA 72 bp | GCCAAGGCCAACAAAGGTCGGATCTTCAAAAGCCCGTaGAGCTCTTTATATGGGGGTGGAGAAAGCTATGGA | + |
|
Preference number: 4 (lower is better) Translates to: AKANKGRIFKSP*SSLYGGGESYG Trigger: TCCATAGCTTTCTCCACCCCCATATAAAGAGCTCAACGGGCTTTTGAAGATCCGACCTTTGTTGGCCTTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR TCA 90 bp | CTAAATTCGAAAGAACCGAAGTGGAAAATCCGGACGGTTGTCTCCACGTGTATCATACCTCGCCGGTGTTaGCTGACATTCCTCCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LNSKEPKWKIRTVVSTCIIPRRC*LTFLPR Trigger: TCTTGGGAGGAATGTCAGTCAACACCGGCGAGGTAT...GATACACGTGGAGACAACCGTCCGGATTTTCCACTTCGGTTCTTTCGAATTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR GCA 90 bp | CCAATAAATCAAGACAGGAATTCAAAGTTGAAATACAATCTCGTTCCCTTTGCCAGAGGCTGTCGCCCATaGCGGCGTCCAGGCCGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PINQDRNSKLKYNLVPFARGCRP*RRPGRD Trigger: ATCACGGCCTGGACGCCGGCATGGGCGACAGCCTCT...GGCAAAGGGAACGAGATTGTATTTCAACTTTGAATTCCTGTCTTGATTTATTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
||
| CDS-3UTR GCA 90 bp | GAAGTGGAAAATCCGGACGGTTGTCTCCACGTGTATCTTGAAATAGACACCGAGTCACTGGGGTCCGTGTaGTGTCTGTTCAAATACTCG | + |
|
Preference number: 4 (lower is better) Translates to: EVENPDGCLHVYLEIDTESLGSV*CLFKYS Trigger: CGAGTATTTGAACAGACAGCACACGGACCCCAGTGA...CTCGGTGTCTATTTCAAGATACACGTGGAGACAACCGTCCGGATTTTCCACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR GCA 90 bp | TTCGAAAGAACCGAAGTGGAAAATCCGGACGGTTGTCTCCACGTGTATCTTGAACCTTCCCCAGACGTGTaGCTGTTAGTGGTGTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FERTEVENPDGCLHVYLEPSPDV*LLVVLF Trigger: GAACAACACCACTAACAGGCACACGTCTGGGGAAGG...TTCAAGATACACGTGGAGACAACCGTCCGGATTTTCCACTTCGGTTCTTTCGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR CCA 90 bp | TCAGGGCATCTAAGGGAGCCTACCTACCCAAGAATGACAGTTCTTATTTCATGTAGCATGATCGCAGCCTaGTCTCTAGGAGGTGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SGHLREPTYPRMTVLISCSMIAA*SLGGEC Trigger: GCACTCACCTCCTAGAGACCAGGCTGCGATCATGCT...ACATGAAATAAGAACTGTCATTCTTGGGTAGGTAGGCTCCCTTAGATGCCCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR CCA 90 bp | GAAGTGGAAAATCCGGACGGTTGTCTCCACGTGTATCTTGAAATAGACACCGAGCATCGTGCCGGTCCATaGATGAATAGGTGTGGACTA | + |
|
Preference number: 4 (lower is better) Translates to: EVENPDGCLHVYLEIDTEHRAGP*MNRCGL Trigger: TAGTCCACACCTATTCATCCATGGACCGGCACGATG...CTCGGTGTCTATTTCAAGATACACGTGGAGACAACCGTCCGGATTTTCCACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064976.6 |
||
| CDS-3UTR GCA 90 bp | AATCCGGACGGTTGTCTCCACGTGTATCTTGAAATAGACACCGAGAGCCGGTTTGGTCCAATAGGTTCATaGCGCTGTTATTGGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: NPDGCLHVYLEIDTESRFGPIGS*RCYWHL Trigger: AAGATGCCAATAACAGCGGCATGAACCTATTGGACC...AAACCGGCTCTCGGTGTCTATTTCAAGATACACGTGGAGACAACCGTCCGGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR GCA 90 bp | CATCTAAGGGAGCCTACCTACCCAAGAATGACAGTTCTTATTTCATGTCCACACTTGCTGCTTTGCGCCTaGCCGCGGGTAAATTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: HLREPTYPRMTVLISCPHLLLCA*PRVNSN Trigger: GTTTGAATTTACCCGCGGGCAGGCGCAAAGCAGCAA...GTGTGGACATGAAATAAGAACTGTCATTCTTGGGTAGGTAGGCTCCCTTAGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR GCA 90 bp | TTCGAAAGAACCGAAGTGGAAAATCCGGACGGTTGTCTCCACGTGTATCTTGAAATATTCTTTCTGGAGTaGAGGTCACTGGGGTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: FERTEVENPDGCLHVYLEIFFLE*RSLGSV Trigger: CACGGACCCCAGTGACCTGCACTCCAGAAAGAATAT...TTCAAGATACACGTGGAGACAACCGTCCGGATTTTCCACTTCGGTTCTTTCGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR CCA 90 bp | CATTTTCTAAAAGGAACCAAGATGAATCAACTTATCGGTTTCCTCTCTGCCGCGAGCATGATCGCAGCCTaGTCTCTAGGAGGTGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: HFLKGTKMNQLIGFLSAASMIAA*SLGGEC Trigger: GCACTCACCTCCTAGAGACCAGGCTGCGATCATGCT...CGCGGCAGAGAGGAAACCGATAAGTTGATTCATCTTGGTTCCTTTTAGAAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
||
| CDS-3UTR CCA 90 bp | AATCCGGACGGTTGTCTCCACGTGTATCTTGAAATAGACACCGAGAGCCGGTTTTCATGCCGCTGTTATTaGCATCTTCAACTGACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NPDGCLHVYLEIDTESRFSCRCY*HLQLTA Trigger: TGCAGTCAGTTGAAGATGCCAATAACAGCGGCATGA...AAACCGGCTCTCGGTGTCTATTTCAAGATACACGTGGAGACAACCGTCCGGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR CCA 90 bp | TGGGGGAACTCCAGCAGTCACCGGCCTACGCTTCAGTCTTTAGCTATTTGGTTTGAGAAGTCACAGATTTaGGAGGGACAGGAACTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: WGNSSSHRPTLQSLAIWFEKSQI*EGQELF Trigger: AAAAAGTTCCTGTCCCTCCCAAATCTGTGACTTCTC...AAACCAAATAGCTAAAGACTGAAGCGTAGGCCGGTGACTGCTGGAGTTCCCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR CCA 90 bp | GGGATGAAAATTAAAGGTCTCTGGAGAGGGAATCCTCACCTAGGAACAAACTCCGCAGCATATTCTTTCTaGAGTGCAGGTCACTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GMKIKGLWRGNPHLGTNSAAYSF*SAGHWG Trigger: ACCCCAGTGACCTGCACTCCAGAAAGAATATGCTGC...GGAGTTTGTTCCTAGGTGAGGATTCCCTCTCCAGAGACCTTTAATTTTCATCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR GCA 90 bp | TCAGGGCATCTAAGGGAGCCTACCTACCCAAGAATGACAGTTCTTATTTCATGTTCACTGGGGTCCGTGTaGTGTCTGTTCAAATACTCG | + |
|
Preference number: 4 (lower is better) Translates to: SGHLREPTYPRMTVLISCSLGSV*CLFKYS Trigger: CGAGTATTTGAACAGACAGCACACGGACCCCAGTGA...ACATGAAATAAGAACTGTCATTCTTGGGTAGGTAGGCTCCCTTAGATGCCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR GCA 90 bp | AGAACCGAAGTGGAAAATCCGGACGGTTGTCTCCACGTGTATCTTGAAATAGACGTGATGAGACTGAAGTaGGTGAGACAGCTTTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: RTEVENPDGCLHVYLEIDVMRLK*VRQLWM Trigger: CATCCAAAGCTGTCTCACGCACTTCAGTCTCATCAC...GTCTATTTCAAGATACACGTGGAGACAACCGTCCGGATTTTCCACTTCGGTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR CCA 90 bp | AATCCGGACGGTTGTCTCCACGTGTATCTTGAAATAGACACCGAGAGCCGGTTTTACAAAGTTGCTTGGTaGCCAGCAGCATATTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NPDGCLHVYLEIDTESRFYKVAW*PAAYSF Trigger: GAAAGAATATGCTGCTGGCCACCAAGCAACTTTGTA...AAACCGGCTCTCGGTGTCTATTTCAAGATACACGTGGAGACAACCGTCCGGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR TCA 90 bp | CTAAATTCGAAAGAACCGAAGTGGAAAATCCGGACGGTTGTCTCCACGTGTATCACTTTGAAGTTGAACTaGGTAGAGATAAACGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LNSKEPKWKIRTVVSTCITLKLN*VEINGP Trigger: CGGGCCGTTTATCTCTACTCAGTTCAACTTCAAAGT...GATACACGTGGAGACAACCGTCCGGATTTTCCACTTCGGTTCTTTCGAATTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR TCA 90 bp | GGGATGAAAATTAAAGGTCTCTGGAGAGGGAATCCTCACCTAGGAACAAACTCCACTTTGAAGTTGAACTaGGTAGAGATAAACGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GMKIKGLWRGNPHLGTNSTLKLN*VEINGP Trigger: CGGGCCGTTTATCTCTACTCAGTTCAACTTCAAAGT...GGAGTTTGTTCCTAGGTGAGGATTCCCTCTCCAGAGACCTTTAATTTTCATCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR TCA 90 bp | CTAAATTCGAAAGAACCGAAGTGGAAAATCCGGACGGTTGTCTCCACGTGTATCGAACTTCGCCCACAGTaGCTTTGTACTTTGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LNSKEPKWKIRTVVSTCIELRPQ*LCTLKL Trigger: CAACTTCAAAGTACAAAGTCACTGTGGGCGAAGTTC...GATACACGTGGAGACAACCGTCCGGATTTTCCACTTCGGTTCTTTCGAATTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR GCA 90 bp | GAAATAGACACCGAGAGCCGGTTTGTTGCTCCGTTGTATGCCTCAGTTTATTTTGTGATGAGACTGAAGTaGGTGAGACAGCTTTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: EIDTESRFVAPLYASVYFVMRLK*VRQLWM Trigger: CATCCAAAGCTGTCTCACGCACTTCAGTCTCATCAC...AAAATAAACTGAGGCATACAACGGAGCAACAAACCGGCTCTCGGTGTCTATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR CCA 90 bp | AATTCGAAAGAACCGAAGTGGAAAATCCGGACGGTTGTCTCCACGTGTATCTTGTCATGCCGCTGTTATTaGCATCTTCAACTGACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NSKEPKWKIRTVVSTCILSCRCY*HLQLTA Trigger: TGCAGTCAGTTGAAGATGCCAATAACAGCGGCATGA...CAAGATACACGTGGAGACAACCGTCCGGATTTTCCACTTCGGTTCTTTCGAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR CCA 90 bp | AATCCGGACGGTTGTCTCCACGTGTATCTTGAAATAGACACCGAGAGCCGGTTTTTTTTAATGACTGACTaGTCCAATAGGTTCATGCCG | + |
|
Preference number: 4 (lower is better) Translates to: NPDGCLHVYLEIDTESRFFLMTD*SNRFMP Trigger: CGGCATGAACCTATTGGACCAGTCAGTCATTAAAAA...AAACCGGCTCTCGGTGTCTATTTCAAGATACACGTGGAGACAACCGTCCGGATT 46% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR TCA 90 bp | GAAATAGACACCGAGAGCCGGTTTGTTGCTCCGTTGTATGCCTCAGTTTATTTTACTTTGAAGTTGAACTaGGTAGAGATAAACGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: EIDTESRFVAPLYASVYFTLKLN*VEINGP Trigger: CGGGCCGTTTATCTCTACTCAGTTCAACTTCAAAGT...AAAATAAACTGAGGCATACAACGGAGCAACAAACCGGCTCTCGGTGTCTATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR TCA 90 bp | TCAGGGCATCTAAGGGAGCCTACCTACCCAAGAATGACAGTTCTTATTTCATGTGAACTTCGCCCACAGTaGCTTTGTACTTTGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SGHLREPTYPRMTVLISCELRPQ*LCTLKL Trigger: CAACTTCAAAGTACAAAGTCACTGTGGGCGAAGTTC...ACATGAAATAAGAACTGTCATTCTTGGGTAGGTAGGCTCCCTTAGATGCCCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR GCA 90 bp | CATCTAAGGGAGCCTACCTACCCAAGAATGACAGTTCTTATTTCATGTCCACACGGTCCAATAGGTTCATaGCGCTGTTATTGGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: HLREPTYPRMTVLISCPHGPIGS*RCYWHL Trigger: AAGATGCCAATAACAGCGGCATGAACCTATTGGACC...GTGTGGACATGAAATAAGAACTGTCATTCTTGGGTAGGTAGGCTCCCTTAGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR CCA 90 bp | AATTCGAAAGAACCGAAGTGGAAAATCCGGACGGTTGTCTCCACGTGTATCTTGTACAAAGTTGCTTGGTaGCCAGCAGCATATTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NSKEPKWKIRTVVSTCILYKVAW*PAAYSF Trigger: GAAAGAATATGCTGCTGGCCACCAAGCAACTTTGTA...CAAGATACACGTGGAGACAACCGTCCGGATTTTCCACTTCGGTTCTTTCGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR GCA 90 bp | CATTTTCTAAAAGGAACCAAGATGAATCAACTTATCGGTTTCCTCTCTGCCGCGGGTCCAATAGGTTCATaGCGCTGTTATTGGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: HFLKGTKMNQLIGFLSAAGPIGS*RCYWHL Trigger: AAGATGCCAATAACAGCGGCATGAACCTATTGGACC...CGCGGCAGAGAGGAAACCGATAAGTTGATTCATCTTGGTTCCTTTTAGAAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
||
| CDS-3UTR CCA 90 bp | GAAATAGACACCGAGAGCCGGTTTGTTGCTCCGTTGTATGCCTCAGTTTATTTTGAGAAGTCACAGATTTaGGAGGGACAGGAACTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: EIDTESRFVAPLYASVYFEKSQI*EGQELF Trigger: AAAAAGTTCCTGTCCCTCCCAAATCTGTGACTTCTC...AAAATAAACTGAGGCATACAACGGAGCAACAAACCGGCTCTCGGTGTCTATTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| 3UTR CAA 72 bp | GTACCTTATAGATTGTGTAGGAAGCCCAAATCTTCCTaGAAGAAGCTCATAAACCATGCGGGTAAAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VPYRLCRKPKSS*KKLINHAGKAW Trigger: CCAAGCTTTACCCGCATGGTTTATGAGCTTCTTCAAGGAAGATTTGGGCTTCCTACACAATCTATAAGGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
||
| CDS-3UTR CCA 90 bp | TCAGGGCATCTAAGGGAGCCTACCTACCCAAGAATGACAGTTCTTATTTCATGTTTTTTAATGACTGACTaGTCCAATAGGTTCATGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SGHLREPTYPRMTVLISCFLMTD*SNRFMP Trigger: CGGCATGAACCTATTGGACCAGTCAGTCATTAAAAA...ACATGAAATAAGAACTGTCATTCTTGGGTAGGTAGGCTCCCTTAGATGCCCTGA 42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| 3UTR CAA 72 bp | TCAGGTTGTTGCTGTTGTTTCTCAGTACCTTATAGATaGTGTAGGAAGCCCAAATCTTCCTTGAAGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SGCCCCFSVPYR*CRKPKSSLKKL Trigger: GAGCTTCTTCAAGGAAGATTTGGGCTTCCTACACAATCTATAAGGTACTGAGAAACAACAGCAACAACCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
||
| 3UTR CAA 72 bp | AATTCAAAGTTGAAATACAATCTCGTTCCCTTTGCCTaGTGTTTCTGGTGTGTGTGTGTGTGTGTGTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: NSKLKYNLVPFA*CFWCVCVCVCV Trigger: CACACACACACACACACACACACACCAGAAACACAAGGCAAAGGGAACGAGATTGTATTTCAACTTTGAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
||
| 3UTR CAA 72 bp | AAACTAAATGTGTGCACCAATCAAATACTCTACTCCTaGAACTTGCTAAAGGTGCCGGTTTTACTTCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KLNVCTNQILYS*NLLKVPVLLRG Trigger: ACCACGAAGTAAAACCGGCACCTTTAGCAAGTTCAAGGAGTAGAGTATTTGATTGGTGCACACATTTAGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
||
| 3UTR CAA 72 bp | AATGTGTGCACCAATCAAATACTCTACTCCTTGAACTaGCTAAAGGTGCCGGTTTTACTTCGTGGTAATATT | + |
|
Preference number: 4 (lower is better) Translates to: NVCTNQILYSLN*LKVPVLLRGNI Trigger: AATATTACCACGAAGTAAAACCGGCACCTTTAGCAAGTTCAAGGAGTAGAGTATTTGATTGGTGCACACATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
||
| CDS TCA 90 bp | AGGCCGTGCAACGAGAGGCTGTCGCCCATGCCGGCGTCCAGGCCGTaGTGTGCGGAATGCAGCAGCACGTCCGGCCGGCGGACAGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RPCNERLSPMPASRP*CAECSSTSGRRTEW Trigger: CCACTCTGTCCGCCGGCCGGACGTGCTGCTGCATTCCGCACATCACGGCCTGGACGCCGGCATGGGCGACAGCCTCTCGTTGCACGGCCT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 ENSMUST00000187754.7 |
||
| CDS GCA 90 bp | CCATGCCGGGATGCCCAAGGCCGTGCAACGAGAGGCTGTCGCCCATaGCGGCGTCCAGGCCGTGATGTGCGGAATGCAGCAGCACGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: PCRDAQGRATRGCRP*RRPGRDVRNAAARP Trigger: CGGACGTGCTGCTGCATTCCGCACATCACGGCCTGGACGCCGGCATGGGCGACAGCCTCTCGTTGCACGGCCTTGGGCATCCCGGCATGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 ENSMUST00000187754.7 |
||
| CDS-3UTR CAA 90 bp | CGCAGCAGCCAGTGGGGCGCCGCCCCTTTACCTACTCGGGAACCGGCCCTTCGCGTCTCGAGCTATGGCTaGGGACGCCATCGTGCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: RSSQWGAAPLPTREPALRVSSYG*GRHRAG Trigger: ACCGGCACGATGGCGTCCCAAGCCATAGCTCGAGAC...GCGAAGGGCCGGTTCCCGAGTAGGTAAAGGGGCGGCGCCCCACTGGCTGCTGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS GCA 90 bp | GTGCAACGAGAGGCTGTCGCCCATGCCGGCGTCCAGGCCGTGATGTaGGGAATGCAGCAGCACGTCCGGCCGGCGGACAGAGTGGTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: VQREAVAHAGVQAVM*GMQQHVRPADRVVV Trigger: GACTACCACTCTGTCCGCCGGCCGGACGTGCTGCTGCATTCCGCACATCACGGCCTGGACGCCGGCATGGGCGACAGCCTCTCGTTGCAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 ENSMUST00000187754.7 |
||
| CDS-3UTR CAA 90 bp | CAGCCAGTGGGGCGCCGCCCCTTTACCTACTCGGGAACCGGCCCTTCGCGGCTGCCCCCATTTTTCGATTaGGCTCTTCTGAGGACGCCG | + |
|
Preference number: 5 (lower is better) Translates to: QPVGRRPFTYSGTGPSRLPPFFD*ALLRTP Trigger: CGGCGTCCTCAGAAGAGCCAAATCGAAAAATGGGGG...CAGCCGCGAAGGGCCGGTTCCCGAGTAGGTAAAGGGGCGGCGCCCCACTGGCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR CAA 90 bp | GCGGCAAAATGGCTTTACAGAGCTCTGGCATCCCTCCCCCGCAGCAGCCAGTGGGTCTCGAGCTATGGCTaGGGACGCCATCGTGCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: AAKWLYRALASLPRSSQWVSSYG*GRHRAG Trigger: ACCGGCACGATGGCGTCCCAAGCCATAGCTCGAGAC...CCACTGGCTGCTGCGGGGGAGGGATGCCAGAGCTCTGTAAAGCCATTTTGCCGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR CAA 90 bp | GCCTTAGCCCTTAGGGTGAGGCCGAGAGCAAGAAGGGCCTGTACGGCTCGCGCCGTGACATTTGCTGCTTaGCGCCTGCCCGCGGGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: ALALRVRPRARRACTARAVTFAA*RLPAGK Trigger: TTTACCCGCGGGCAGGCGCAAAGCAGCAAATGTCAC...GGCGCGAGCCGTACAGGCCCTTCTTGCTCTCGGCCTCACCCTAAGGGCTAAGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR CAA 90 bp | GCGCCGCCCCTTTACCTACTCGGGAACCGGCCCTTCGCGGCTGCCTTAGCCCTTAATACCTCGCCGGTGTaGACTGACATTCCTCCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: APPLYLLGNRPFAAALALNTSPV*TDIPPK Trigger: CTTGGGAGGAATGTCAGTCAACACCGGCGAGGTATT...AAGGGCTAAGGCAGCCGCGAAGGGCCGGTTCCCGAGTAGGTAAAGGGGCGGCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR CAA 90 bp | CGCAGCAGCCAGTGGGGCGCCGCCCCTTTACCTACTCGGGAACCGGCCCTTCGCTTGTTCAAGAACATCTaGTCCATGCCTTTGAGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: RSSQWGAAPLPTREPALRLFKNI*SMPLSA Trigger: GGCGCTCAAAGGCATGGACAAGATGTTCTTGAACAA...GCGAAGGGCCGGTTCCCGAGTAGGTAAAGGGGCGGCGCCCCACTGGCTGCTGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR CAA 90 bp | TTCGCTGATGCTCACAGGAACATCAGGGCATCTAAGGGAGCCTACCTACCCAAGCACGCGTGGGGCGCGTaGCCCTGGGCCTTCCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: FADAHRNIRASKGAYLPKHAWGA*PWAFPR Trigger: TCTGGGGAAGGCCCAGGGCAACGCGCCCCACGCGTG...CTTGGGTAGGTAGGCTCCCTTAGATGCCCTGATGTTCCTGTGAGCATCAGCGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187754.7 |
||
| CDS-3UTR CAA 90 bp | TTCAGTGGCCCACATGTTCCCAGGACCTGCACAGTAAGAGCAAGGCGCATCCATGCCCACTTCTTGGCGTaGCCGTTGCCCCCACGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: FSGPHVPRTCTVRARRIHAHFLA*PLPPRV Trigger: CACCCGTGGGGGCAACGGCAACGCCAAGAAGTGGGC...ATGGATGCGCCTTGCTCTTACTGTGCAGGTCCTGGGAACATGTGGGCCACTGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR CAA 90 bp | AGAAGGGGCTCCAAGGACCTTGGGGGAACTCCAGCAGTCACCGGCCTACGCTTCGTGACATTTGCTGCTTaGCGCCTGCCCGCGGGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: RRGSKDLGGTPAVTGLRFVTFAA*RLPAGK Trigger: TTTACCCGCGGGCAGGCGCAAAGCAGCAAATGTCAC...GAAGCGTAGGCCGGTGACTGCTGGAGTTCCCCCAAGGTCCTTGGAGCCCCTTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR CAA 90 bp | CAAGAAGGGCCTGTACGGCTCGCGCCCTCAGCAGCTGCTGATTCTATGTCCTCAGTGCGTGAGACAGCTTaGGATGCCCGGCTCCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: QEGPVRLAPSAAADSMSSVRETA*DARLQD Trigger: ATCCTGGAGCCGGGCATCCAAAGCTGTCTCACGCAC...TGAGGACATAGAATCAGCAGCTGCTGAGGGCGCGAGCCGTACAGGCCCTTCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR CAA 90 bp | TTCGCTGATGCTCACAGGAACATCAGGGCATCTAAGGGAGCCTACCTACCCAAGCCCAGGAGAGATGCATaGAGGCATTCAGGGGGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: FADAHRNIRASKGAYLPKPRRDA*RHSGGE Trigger: CTCGCCCCCTGAATGCCTCAATGCATCTCTCCTGGG...CTTGGGTAGGTAGGCTCCCTTAGATGCCCTGATGTTCCTGTGAGCATCAGCGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS CCA 90 bp | TCCTTGGGACACAGAGCCCAGTTGAGAGAGTCTCGAGCTATGGCTTaGGACGCCATCGTGCCGGTCCTCATAGATGTCTTCGTACTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SLGHRAQLRESRAMA*DAIVPVLIDVFVLD Trigger: GTCAAGTACGAAGACATCTATGAGGACCGGCACGATGGCGTCCCAAGCCATAGCTCGAGACTCTCTCAACTGGGCTCTGTGTCCCAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR CAA 90 bp | AGAACCGAAGTGGAAAATCCGGACGGTTGTCTCCACGTGTATCTTGAAATAGACGCCCACTTCTTGGCGTaGCCGTTGCCCCCACGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RTEVENPDGCLHVYLEIDAHFLA*PLPPRV Trigger: CACCCGTGGGGGCAACGGCAACGCCAAGAAGTGGGC...GTCTATTTCAAGATACACGTGGAGACAACCGTCCGGATTTTCCACTTCGGTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR CAA 90 bp | CTAAATTCGAAAGAACCGAAGTGGAAAATCCGGACGGTTGTCTCCACGTGTATCACAGCGGCGGGGCGCTaGAGTAGGGTCCTTGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: LNSKEPKWKIRTVVSTCITAAGR*SRVLGT Trigger: TGTCCCAAGGACCCTACTCAAGCGCCCCGCCGCTGT...GATACACGTGGAGACAACCGTCCGGATTTTCCACTTCGGTTCTTTCGAATTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR CAA 90 bp | AATCCGGACGGTTGTCTCCACGTGTATCTTGAAATAGACACCGAGAGCCGGTTTCCCAGGAGAGATGCATaGAGGCATTCAGGGGGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: NPDGCLHVYLEIDTESRFPRRDA*RHSGGE Trigger: CTCGCCCCCTGAATGCCTCAATGCATCTCTCCTGGG...AAACCGGCTCTCGGTGTCTATTTCAAGATACACGTGGAGACAACCGTCCGGATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR CAA 90 bp | CTAAATTCGAAAGAACCGAAGTGGAAAATCCGGACGGTTGTCTCCACGTGTATCGTCTCGAGCTATGGCTaGGGACGCCATCGTGCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: LNSKEPKWKIRTVVSTCIVSSYG*GRHRAG Trigger: ACCGGCACGATGGCGTCCCAAGCCATAGCTCGAGAC...GATACACGTGGAGACAACCGTCCGGATTTTCCACTTCGGTTCTTTCGAATTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR CAA 90 bp | CATTTTCTAAAAGGAACCAAGATGAATCAACTTATCGGTTTCCTCTCTGCCGCGACAGCGGCGGGGCGCTaGAGTAGGGTCCTTGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: HFLKGTKMNQLIGFLSAATAAGR*SRVLGT Trigger: TGTCCCAAGGACCCTACTCAAGCGCCCCGCCGCTGT...CGCGGCAGAGAGGAAACCGATAAGTTGATTCATCTTGGTTCCTTTTAGAAAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
||
| CDS-3UTR CAA 90 bp | TTCAGTGGCCCACATGTTCCCAGGACCTGCACAGTAAGAGCAAGGCGCATCCATTTCATGCCGCTGTTATaGGCATCTTCAACTGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: FSGPHVPRTCTVRARRIHFMPLL*ASSTDC Trigger: GCAGTCAGTTGAAGATGCCAATAACAGCGGCATGAA...ATGGATGCGCCTTGCTCTTACTGTGCAGGTCCTGGGAACATGTGGGCCACTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR CAA 90 bp | CTAAATTCGAAAGAACCGAAGTGGAAAATCCGGACGGTTGTCTCCACGTGTATCGTGCGTGAGACAGCTTaGGATGCCCGGCTCCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LNSKEPKWKIRTVVSTCIVRETA*DARLQD Trigger: ATCCTGGAGCCGGGCATCCAAAGCTGTCTCACGCAC...GATACACGTGGAGACAACCGTCCGGATTTTCCACTTCGGTTCTTTCGAATTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS GCA 90 bp | TCCTCCTTGTCGCCAGTTTTACTACCTGGGCCTTCCCCAGACGTGTaGCTGTTAGTGGTGTTGTTCAAGAACATCTTGTCCATGCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSLSPVLLPGPSPDV*LLVVLFKNILSMPL Trigger: CAAAGGCATGGACAAGATGTTCTTGAACAACACCACTAACAGGCACACGTCTGGGGAAGGCCCAGGTAGTAAAACTGGCGACAAGGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR CAA 90 bp | ACCTCAATTTTTGTTTACAACCTTCATCCTTTGAGCGATTCCCTCAGAGGGTCCCCCAGGAGAGATGCATaGAGGCATTCAGGGGGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: TSIFVYNLHPLSDSLRGSPRRDA*RHSGGE Trigger: CTCGCCCCCTGAATGCCTCAATGCATCTCTCCTGGG...GGACCCTCTGAGGGAATCGCTCAAAGGATGAAGGTTGTAAACAAAAATTGAGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
||
| CDS-3UTR CAA 90 bp | ACCTCAATTTTTGTTTACAACCTTCATCCTTTGAGCGATTCCCTCAGAGGGTCCGTGCGTGAGACAGCTTaGGATGCCCGGCTCCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: TSIFVYNLHPLSDSLRGSVRETA*DARLQD Trigger: ATCCTGGAGCCGGGCATCCAAAGCTGTCTCACGCAC...GGACCCTCTGAGGGAATCGCTCAAAGGATGAAGGTTGTAAACAAAAATTGAGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
||
| CDS-3UTR CAA 90 bp | TCCAGCAGTCACCGGCCTACGCTTCAGTCTTTAGCTATTTGGTTTTGGACCCCCTCGCCCACAGTGACTTaGTACTTTGAAGTTGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: SSSHRPTLQSLAIWFWTPSPTVT*YFEVEL Trigger: CAGTTCAACTTCAAAGTACAAAGTCACTGTGGGCGA...GGGGGTCCAAAACCAAATAGCTAAAGACTGAAGCGTAGGCCGGTGACTGCTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR CAA 90 bp | CTAAATTCGAAAGAACCGAAGTGGAAAATCCGGACGGTTGTCTCCACGTGTATCCCCCCATTTTTCGATTaGGCTCTTCTGAGGACGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LNSKEPKWKIRTVVSTCIPPFFD*ALLRTP Trigger: CGGCGTCCTCAGAAGAGCCAAATCGAAAAATGGGGG...GATACACGTGGAGACAACCGTCCGGATTTTCCACTTCGGTTCTTTCGAATTTAG 50% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR CAA 90 bp | AGAACCGAAGTGGAAAATCCGGACGGTTGTCTCCACGTGTATCTTGAAATAGACCCCCCATTTTTCGATTaGGCTCTTCTGAGGACGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RTEVENPDGCLHVYLEIDPPFFD*ALLRTP Trigger: CGGCGTCCTCAGAAGAGCCAAATCGAAAAATGGGGG...GTCTATTTCAAGATACACGTGGAGACAACCGTCCGGATTTTCCACTTCGGTTCT 50% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR CAA 90 bp | GAAATAGACACCGAGAGCCGGTTTGTTGCTCCGTTGTATGCCTCAGTTTATTTTGTGACATTTGCTGCTTaGCGCCTGCCCGCGGGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: EIDTESRFVAPLYASVYFVTFAA*RLPAGK Trigger: TTTACCCGCGGGCAGGCGCAAAGCAGCAAATGTCAC...AAAATAAACTGAGGCATACAACGGAGCAACAAACCGGCTCTCGGTGTCTATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR CAA 90 bp | CCGGACGGTTGTCTCCACGTGTATCTTGAAATAGACACCGAGAGCCGGTTTGTTTTGTTCAAGAACATCTaGTCCATGCCTTTGAGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: PDGCLHVYLEIDTESRFVLFKNI*SMPLSA Trigger: GGCGCTCAAAGGCATGGACAAGATGTTCTTGAACAA...AACAAACCGGCTCTCGGTGTCTATTTCAAGATACACGTGGAGACAACCGTCCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR CAA 90 bp | CTAAATTCGAAAGAACCGAAGTGGAAAATCCGGACGGTTGTCTCCACGTGTATCAATACCTCGCCGGTGTaGACTGACATTCCTCCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LNSKEPKWKIRTVVSTCINTSPV*TDIPPK Trigger: CTTGGGAGGAATGTCAGTCAACACCGGCGAGGTATT...GATACACGTGGAGACAACCGTCCGGATTTTCCACTTCGGTTCTTTCGAATTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR CAA 90 bp | TGGGGGAACTCCAGCAGTCACCGGCCTACGCTTCAGTCTTTAGCTATTTGGTTTTCGCCCACAGTGACTTaGTACTTTGAAGTTGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: WGNSSSHRPTLQSLAIWFSPTVT*YFEVEL Trigger: CAGTTCAACTTCAAAGTACAAAGTCACTGTGGGCGA...AAACCAAATAGCTAAAGACTGAAGCGTAGGCCGGTGACTGCTGGAGTTCCCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS TCA 90 bp | GTAGAGATAAACGGCCCGGGACTGAGCAAAATACCTCGCCGGTGTTaGCTGACATTCCTCCCAAGAAGCCATCTTTATTCATCATTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VEINGPGLSKIPRRC*LTFLPRSHLYSSLE Trigger: CTCTAATGATGAATAAAGATGGCTTCTTGGGAGGAATGTCAGTCAACACCGGCGAGGTATTTTGCTCAGTCCCGGGCCGTTTATCTCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 ENSMUST00000187754.7 |
||
| CDS-3UTR CAA 90 bp | AATCCGGACGGTTGTCTCCACGTGTATCTTGAAATAGACACCGAGAGCCGGTTTAGAGAAGTCACAGATTaGGGAGGGACAGGAACTTTT | + |
|
Preference number: 5 (lower is better) Translates to: NPDGCLHVYLEIDTESRFREVTD*GGTGTF Trigger: AAAAGTTCCTGTCCCTCCCAAATCTGTGACTTCTCT...AAACCGGCTCTCGGTGTCTATTTCAAGATACACGTGGAGACAACCGTCCGGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR CAA 90 bp | TCAGGGCATCTAAGGGAGCCTACCTACCCAAGAATGACAGTTCTTATTTCATGTAATACCTCGCCGGTGTaGACTGACATTCCTCCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SGHLREPTYPRMTVLISCNTSPV*TDIPPK Trigger: CTTGGGAGGAATGTCAGTCAACACCGGCGAGGTATT...ACATGAAATAAGAACTGTCATTCTTGGGTAGGTAGGCTCCCTTAGATGCCCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR CAA 90 bp | AATCCGGACGGTTGTCTCCACGTGTATCTTGAAATAGACACCGAGAGCCGGTTTTCGCCCACAGTGACTTaGTACTTTGAAGTTGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: NPDGCLHVYLEIDTESRFSPTVT*YFEVEL Trigger: CAGTTCAACTTCAAAGTACAAAGTCACTGTGGGCGA...AAACCGGCTCTCGGTGTCTATTTCAAGATACACGTGGAGACAACCGTCCGGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR CAA 90 bp | AATCCGGACGGTTGTCTCCACGTGTATCTTGAAATAGACACCGAGAGCCGGTTTTGCCTGTTAGTGGTGTaGTTCAAGAACATCTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: NPDGCLHVYLEIDTESRFCLLVV*FKNILS Trigger: GGACAAGATGTTCTTGAACAACACCACTAACAGGCA...AAACCGGCTCTCGGTGTCTATTTCAAGATACACGTGGAGACAACCGTCCGGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR CAA 90 bp | CTCGAGAAGAGGCAGTTGTTACCTCTTGACTGGGTGGTCAAAACAAATGGTACTCTGTGTTTCTCCTCCTaGTCGCCAGTTTTACTACCT | + |
|
Preference number: 5 (lower is better) Translates to: LEKRQLLPLDWVVKTNGTLCFSS*SPVLLP Trigger: AGGTAGTAAAACTGGCGACAAGGAGGAGAAACACAG...AGTACCATTTGTTTTGACCACCCAGTCAAGAGGTAACAACTGCCTCTTCTCGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
||
| CDS-3UTR CAA 90 bp | CTAAATTCGAAAGAACCGAAGTGGAAAATCCGGACGGTTGTCTCCACGTGTATCCTGTGTTTCTCCTCCTaGTCGCCAGTTTTACTACCT | + |
|
Preference number: 5 (lower is better) Translates to: LNSKEPKWKIRTVVSTCILCFSS*SPVLLP Trigger: AGGTAGTAAAACTGGCGACAAGGAGGAGAAACACAG...GATACACGTGGAGACAACCGTCCGGATTTTCCACTTCGGTTCTTTCGAATTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR CAA 90 bp | CATCTAAGGGAGCCTACCTACCCAAGAATGACAGTTCTTATTTCATGTCCACACTTCATGCCGCTGTTATaGGCATCTTCAACTGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: HLREPTYPRMTVLISCPHFMPLL*ASSTDC Trigger: GCAGTCAGTTGAAGATGCCAATAACAGCGGCATGAA...GTGTGGACATGAAATAAGAACTGTCATTCTTGGGTAGGTAGGCTCCCTTAGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR CAA 90 bp | AAATTCGAAAGAACCGAAGTGGAAAATCCGGACGGTTGTCTCCACGTGTATCTTTTCATGCCGCTGTTATaGGCATCTTCAACTGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: KFERTEVENPDGCLHVYLFMPLL*ASSTDC Trigger: GCAGTCAGTTGAAGATGCCAATAACAGCGGCATGAA...AAGATACACGTGGAGACAACCGTCCGGATTTTCCACTTCGGTTCTTTCGAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR CAA 90 bp | CTCGAGAAGAGGCAGTTGTTACCTCTTGACTGGGTGGTCAAAACAAATGGTACTAGAGAAGTCACAGATTaGGGAGGGACAGGAACTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LEKRQLLPLDWVVKTNGTREVTD*GGTGTF Trigger: AAAAGTTCCTGTCCCTCCCAAATCTGTGACTTCTCT...AGTACCATTTGTTTTGACCACCCAGTCAAGAGGTAACAACTGCCTCTTCTCGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027059.11 |
||
| CDS-3UTR CAA 90 bp | GGGATGAAAATTAAAGGTCTCTGGAGAGGGAATCCTCACCTAGGAACAAACTCCAGAGAAGTCACAGATTaGGGAGGGACAGGAACTTTT | + |
|
Preference number: 5 (lower is better) Translates to: GMKIKGLWRGNPHLGTNSREVTD*GGTGTF Trigger: AAAAGTTCCTGTCCCTCCCAAATCTGTGACTTCTCT...GGAGTTTGTTCCTAGGTGAGGATTCCCTCTCCAGAGACCTTTAATTTTCATCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR CAA 90 bp | TCAGGGCATCTAAGGGAGCCTACCTACCCAAGAATGACAGTTCTTATTTCATGTTTGTTCAAGAACATCTaGTCCATGCCTTTGAGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: SGHLREPTYPRMTVLISCLFKNI*SMPLSA Trigger: GGCGCTCAAAGGCATGGACAAGATGTTCTTGAACAA...ACATGAAATAAGAACTGTCATTCTTGGGTAGGTAGGCTCCCTTAGATGCCCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS-3UTR CAA 90 bp | AATTCGAAAGAACCGAAGTGGAAAATCCGGACGGTTGTCTCCACGTGTATCTTGTGCCTGTTAGTGGTGTaGTTCAAGAACATCTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: NSKEPKWKIRTVVSTCILCLLVV*FKNILS Trigger: GGACAAGATGTTCTTGAACAACACCACTAACAGGCA...CAAGATACACGTGGAGACAACCGTCCGGATTTTCCACTTCGGTTCTTTCGAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
||
| CDS-3UTR CAA 90 bp | TCAGGGCATCTAAGGGAGCCTACCTACCCAAGAATGACAGTTCTTATTTCATGTTGCCTGTTAGTGGTGTaGTTCAAGAACATCTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SGHLREPTYPRMTVLISCCLLVV*FKNILS Trigger: GGACAAGATGTTCTTGAACAACACCACTAACAGGCA...ACATGAAATAAGAACTGTCATTCTTGGGTAGGTAGGCTCCCTTAGATGCCCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
||
| CDS TCA 72 bp | AACGAGAGGCTGTCGCCCATGCCGGCGTCCAGGCCGTaGTGTGCGGAATGCAGCAGCACGTCCGGCCGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: NERLSPMPASRP*CAECSSTSGRR Trigger: CCGCCGGCCGGACGTGCTGCTGCATTCCGCACATCACGGCCTGGACGCCGGCATGGGCGACAGCCTCTCGTT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 ENSMUST00000187754.7 |
||
| CDS GCA 72 bp | GAGGCTGTCGCCCATGCCGGCGTCCAGGCCGTGATGTaGGGAATGCAGCAGCACGTCCGGCCGGCGGACAGA | + |
|
Preference number: 6 (lower is better) Translates to: EAVAHAGVQAVM*GMQQHVRPADR Trigger: TCTGTCCGCCGGCCGGACGTGCTGCTGCATTCCGCACATCACGGCCTGGACGCCGGCATGGGCGACAGCCTC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 ENSMUST00000187754.7 |
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| CDS GCA 72 bp | GACTGCACGTCTTCCATGCCGGGATGCCCAAGGCCGTaGAACGAGAGGCTGTCGCCCATGCCGGCGTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: DCTSSMPGCPRP*NERLSPMPASR Trigger: CCTGGACGCCGGCATGGGCGACAGCCTCTCGTTGCACGGCCTTGGGCATCCCGGCATGGAAGACGTGCAGTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 ENSMUST00000187754.7 |
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| CDS GCA 72 bp | GATGCCCAAGGCCGTGCAACGAGAGGCTGTCGCCCATaGCGGCGTCCAGGCCGTGATGTGCGGAATGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: DAQGRATRGCRP*RRPGRDVRNAA Trigger: TGCTGCATTCCGCACATCACGGCCTGGACGCCGGCATGGGCGACAGCCTCTCGTTGCACGGCCTTGGGCATC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 ENSMUST00000187754.7 |
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| CDS GCA 72 bp | GTGAGCGCAGCGCAAATGGCCGGGGCACCGAAGCCGTaGGTGATGAGACTGAAGTGCGTGAGACAGCTTTGG | + |
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Preference number: 6 (lower is better) Translates to: VSAAQMAGAPKP*VMRLKCVRQLW Trigger: CCAAAGCTGTCTCACGCACTTCAGTCTCATCACGCACGGCTTCGGTGCCCCGGCCATTTGCGCTGCGCTCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 ENSMUST00000187754.7 |
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| CDS GCA 72 bp | GCATCTTCAACTGACTGCACGTCTTCCATGCCGGGATaGCCAAGGCCGTGCAACGAGAGGCTGTCGCCCATG | + |
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Preference number: 6 (lower is better) Translates to: ASSTDCTSSMPG*PRPCNERLSPM Trigger: CATGGGCGACAGCCTCTCGTTGCACGGCCTTGGGCATCCCGGCATGGAAGACGTGCAGTCAGTTGAAGATGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 ENSMUST00000187754.7 |
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| CDS GCA 72 bp | CGATTTGGCTCTTCTGAGGACGCCGCCCAGGAGAGATaGATTGAGGCATTCAGGGGGCGAGAGCCTTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: RFGSSEDAAQER*IEAFRGREPSL Trigger: CAGAGAAGGCTCTCGCCCCCTGAATGCCTCAATGCATCTCTCCTGGGCGGCGTCCTCAGAAGAGCCAAATCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 ENSMUST00000187754.7 |
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| CDS GCA 72 bp | CGTGGGGCGCGTTGCCCTGGGCCTTCCCCAGACGTGTaGCTGTTAGTGGTGTTGTTCAAGAACATCTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: RGARCPGPSPDV*LLVVLFKNILS Trigger: GGACAAGATGTTCTTGAACAACACCACTAACAGGCACACGTCTGGGGAAGGCCCAGGGCAACGCGCCCCACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187754.7 |
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| CDS CAA 90 bp | GTCCTTGGGACACAGAGCCCAGTTGAGAGAGTCTCGAGCTATGGCTaGGGACGCCATCGTGCCGGTCCATGGATGAATAGGTGTGGACTA | + |
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Preference number: 6 (lower is better) Translates to: VLGTQSPVERVSSYG*GRHRAGPWMNRCGL Trigger: TAGTCCACACCTATTCATCCATGGACCGGCACGATGGCGTCCCAAGCCATAGCTCGAGACTCTCTCAACTGGGCTCTGTGTCCCAAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064976.6 |
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| CDS CCA 72 bp | CACAGAGCCCAGTTGAGAGAGTCTCGAGCTATGGCTTaGGACGCCATCGTGCCGGTCCTCATAGATGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: HRAQLRESRAMA*DAIVPVLIDVF Trigger: GAAGACATCTATGAGGACCGGCACGATGGCGTCCCAAGCCATAGCTCGAGACTCTCTCAACTGGGCTCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
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| CDS CAA 72 bp | ACACAGAGCCCAGTTGAGAGAGTCTCGAGCTATGGCTaGGGACGCCATCGTGCCGGTCCATGGATGAATAGG | + |
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Preference number: 6 (lower is better) Translates to: TQSPVERVSSYG*GRHRAGPWMNR Trigger: CCTATTCATCCATGGACCGGCACGATGGCGTCCCAAGCCATAGCTCGAGACTCTCTCAACTGGGCTCTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064976.6 |
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| CDS CAA 72 bp | ACACAGAGCCCAGTTGAGAGAGTCTCGAGCTATGGCTaGGGACGCCATCGTGCCGGTCCTCATAGATGTCTT | + |
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Preference number: 6 (lower is better) Translates to: TQSPVERVSSYG*GRHRAGPHRCL Trigger: AAGACATCTATGAGGACCGGCACGATGGCGTCCCAAGCCATAGCTCGAGACTCTCTCAACTGGGCTCTGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000187754.7 |
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| CDS TCA 72 bp | AACGGCCCGGGACTGAGCAAAATACCTCGCCGGTGTTaGCTGACATTCCTCCCAAGAAGCCATCTTTATTCA | + |
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Preference number: 6 (lower is better) Translates to: NGPGLSKIPRRC*LTFLPRSHLYS Trigger: TGAATAAAGATGGCTTCTTGGGAGGAATGTCAGTCAACACCGGCGAGGTATTTTGCTCAGTCCCGGGCCGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 ENSMUST00000187754.7 |
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| CDS GCA 72 bp | TCGCCAGTTTTACTACCTGGGCCTTCCCCAGACGTGTaGCTGTTAGTGGTGTTGTTCAAGAACATCTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: SPVLLPGPSPDV*LLVVLFKNILS Trigger: GGACAAGATGTTCTTGAACAACACCACTAACAGGCACACGTCTGGGGAAGGCCCAGGTAGTAAAACTGGCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 |
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| CDS CAA 72 bp | AAACGGCCCGGGACTGAGCAAAATACCTCGCCGGTGTaGACTGACATTCCTCCCAAGAAGCCATCTTTATTC | + |
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Preference number: 6 (lower is better) Translates to: KRPGTEQNTSPV*TDIPPKKPSLF Trigger: GAATAAAGATGGCTTCTTGGGAGGAATGTCAGTCAACACCGGCGAGGTATTTTGCTCAGTCCCGGGCCGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 ENSMUST00000187754.7 |
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| CDS GCA 72 bp | ATATTCTTTCTGGAGTGCAGGTCACTGGGGTCCGTGTaGTGTCTGTTCAAATACTCGGACACGGCTTTAGCA | + |
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Preference number: 6 (lower is better) Translates to: IFFLECRSLGSV*CLFKYSDTALA Trigger: TGCTAAAGCCGTGTCCGAGTATTTGAACAGACAGCACACGGACCCCAGTGACCTGCACTCCAGAAAGAATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 ENSMUST00000187754.7 |
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| CDS CAA 72 bp | ATGACTGACTGGTCCAATAGGTTCATGCCGCTGTTATaGGCATCTTCAACTGACTGCACGTCTTCCATGCCG | + |
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Preference number: 6 (lower is better) Translates to: MTDWSNRFMPLL*ASSTDCTSSMP Trigger: CGGCATGGAAGACGTGCAGTCAGTTGAAGATGCCAATAACAGCGGCATGAACCTATTGGACCAGTCAGTCAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 ENSMUST00000187754.7 |
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| CDS CAA 72 bp | TCTACCAGTGAGGTGAGTAACGTGACATTTGCTGCTTaGCGCCTGCCCGCGGGTAAATTCAAACCGATTTTT | + |
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Preference number: 6 (lower is better) Translates to: STSEVSNVTFAA*RLPAGKFKPIF Trigger: AAAAATCGGTTTGAATTTACCCGCGGGCAGGCGCAAAGCAGCAAATGTCACGTTACTCACCTCACTGGTAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 ENSMUST00000187754.7 |
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| CDS CAA 90 bp | AGTAGAGATAAACGGCCCGGGACTGAGCAAAATACCTCGCCGGTGTaGACTGACATTCCTCCCAAGAAGCCATCTTTATTCATCATTAGA | + |
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Preference number: 6 (lower is better) Translates to: SRDKRPGTEQNTSPV*TDIPPKKPSLFIIR Trigger: TCTAATGATGAATAAAGATGGCTTCTTGGGAGGAATGTCAGTCAACACCGGCGAGGTATTTTGCTCAGTCCCGGGCCGTTTATCTCTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 ENSMUST00000187754.7 |
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| CDS TCA 72 bp | TCTGTTTCACAAATATACCCGAAATCCCGAGCTAAGTaGACAGCTTCCCCTTCTACCAGTGAGGTGAGTAAC | + |
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Preference number: 6 (lower is better) Translates to: SVSQIYPKSRAK*TASPSTSEVSN Trigger: GTTACTCACCTCACTGGTAGAAGGGGAAGCTGTTCACTTAGCTCGGGATTTCGGGTATATTTGTGAAACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027059.11 ENSMUST00000064976.6 ENSMUST00000187754.7 |
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