Pregenerated sensors for TEX55 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022798Ensembl transcript IDs: ENSMUST00000122078.3
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | AGGCAGAGTTACCACCGATGCCTACTGAAAACACATTTTTCAAGTGGGAGCAGGTGTTCAGAACCTCTGTaGAGGGCCTGGCCTGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: RQSYHRCLLKTHFSSGSRCSEPL*RAWPAP Trigger: AGGAGCAGGCCAGGCCCTTCACAGAGGTTCTGAACA...CCTGCTCCCACTTGAAAAATGTGTTTTCAGTAGGCATCGGTGGTAACTCTGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS-3UTR GCA 90 bp | AGGCAGAGTTACCACCGATGCCTACTGAAAACACATTTTTCAAGTGGGAGCAGGAGTCTGCGCTCTGCCTaGTGGGATGCTCTCCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: RQSYHRCLLKTHFSSGSRSLRSA*WDALLS Trigger: AGAGAGGAGAGCATCCCAGCAGGCAGAGCGCAGACT...CCTGCTCCCACTTGAAAAATGTGTTTTCAGTAGGCATCGGTGGTAACTCTGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS-3UTR CCA 90 bp | ACATTTAGGCAGAGTTACCACCGATGCCTACTGAAAACACATTTTTCAAGTGGGCTGCGCTCTGCCTGCTaGGATGCTCTCCTCTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: TFRQSYHRCLLKTHFSSGLRSAC*DALLSA Trigger: TGCAGAGAGGAGAGCATCCCAGCAGGCAGAGCGCAG...CCCACTTGAAAAATGTGTTTTCAGTAGGCATCGGTGGTAACTCTGCCTAAATGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS-3UTR GCA 90 bp | TCTGACCTAAAAATTAAGACCACATTTAGGCAGAGTTACCACCGATGCCTACTGGGATGCTCTCCTCTCTaGATGGCCAGGCAATCTGTG | + |
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Preference number: 4 (lower is better) Translates to: SDLKIKTTFRQSYHRCLLGCSPL*MARQSV Trigger: CACAGATTGCCTGGCCATGCAGAGAGGAGAGCATCC...CAGTAGGCATCGGTGGTAACTCTGCCTAAATGTGGTCTTAATTTTTAGGTCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS-3UTR GCA 90 bp | ACATTTAGGCAGAGTTACCACCGATGCCTACTGAAAACACATTTTTCAAGTGGGTCCTCTCAGATAGTCTaGGCTCTGCCTGCTGGGATG | + |
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Preference number: 4 (lower is better) Translates to: TFRQSYHRCLLKTHFSSGSSQIV*ALPAGM Trigger: CATCCCAGCAGGCAGAGCGCAGACTATCTGAGAGGA...CCCACTTGAAAAATGTGTTTTCAGTAGGCATCGGTGGTAACTCTGCCTAAATGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS-3UTR CCA 90 bp | AGGCAGAGTTACCACCGATGCCTACTGAAAACACATTTTTCAAGTGGGAGCAGGGACAGCAAAGATTCTTaGCCATCTATCTTGCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RQSYHRCLLKTHFSSGSRDSKDS*PSILPE Trigger: CTCTGGCAAGATAGATGGCCAAGAATCTTTGCTGTC...CCTGCTCCCACTTGAAAAATGTGTTTTCAGTAGGCATCGGTGGTAACTCTGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS-3UTR GCA 90 bp | ACATTTAGGCAGAGTTACCACCGATGCCTACTGAAAACACATTTTTCAAGTGGGAGTCTGTCTAGAACCTaGATTGGCTTGGCCGGATAC | + |
|
Preference number: 4 (lower is better) Translates to: TFRQSYHRCLLKTHFSSGSLSRT*IGLAGY Trigger: GTATCCGGCCAAGCCAATGCAGGTTCTAGACAGACT...CCCACTTGAAAAATGTGTTTTCAGTAGGCATCGGTGGTAACTCTGCCTAAATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS-3UTR CCA 90 bp | AGGCAGAGTTACCACCGATGCCTACTGAAAACACATTTTTCAAGTGGGAGCAGGGAGGGAAGTTTTTCATaGGAGGTGGAGGTAGTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: RQSYHRCLLKTHFSSGSREGSFS*EVEVVN Trigger: ATTAACTACCTCCACCTCCCATGAAAAACTTCCCTC...CCTGCTCCCACTTGAAAAATGTGTTTTCAGTAGGCATCGGTGGTAACTCTGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS-3UTR TCA 90 bp | ACATTTAGGCAGAGTTACCACCGATGCCTACTGAAAACACATTTTTCAAGTGGGTGTTTCCTCTGTAGTTaGAACTTTGGATGGGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TFRQSYHRCLLKTHFSSGCFLCS*NFGWEL Trigger: GAGCTCCCATCCAAAGTTTCAACTACAGAGGAAACA...CCCACTTGAAAAATGTGTTTTCAGTAGGCATCGGTGGTAACTCTGCCTAAATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS-3UTR TCA 90 bp | CTAAAAATTAAGACCACATTTAGGCAGAGTTACCACCGATGCCTACTGAAAACAATAGTCAGTGCTGGCTaGTGGAATCAGGTCATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LKIKTTFRQSYHRCLLKTIVSAG*WNQVIK Trigger: TTTGATGACCTGATTCCATCAGCCAGCACTGACTAT...TGTTTTCAGTAGGCATCGGTGGTAACTCTGCCTAAATGTGGTCTTAATTTTTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS-3UTR TCA 90 bp | CTAAAAATTAAGACCACATTTAGGCAGAGTTACCACCGATGCCTACTGAAAACAAAGTGTTTTGTAGTATaGGCGGTAGCCAGCCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LKIKTTFRQSYHRCLLKTKCFVV*AVASLF Trigger: AAACAGGCTGGCTACCGCTCATACTACAAAACACTT...TGTTTTCAGTAGGCATCGGTGGTAACTCTGCCTAAATGTGGTCTTAATTTTTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS-3UTR TCA 90 bp | TCTGACCTAAAAATTAAGACCACATTTAGGCAGAGTTACCACCGATGCCTACTGAGACTAGGTTTTCAGTaGTCTGCTGGAATATATGCA | + |
|
Preference number: 4 (lower is better) Translates to: SDLKIKTTFRQSYHRCLLRLGFQ*SAGIYA Trigger: TGCATATATTCCAGCAGATCACTGAAAACCTAGTCT...CAGTAGGCATCGGTGGTAACTCTGCCTAAATGTGGTCTTAATTTTTAGGTCAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS-3UTR GCA 90 bp | ACATTTAGGCAGAGTTACCACCGATGCCTACTGAAAACACATTTTTCAAGTGGGCACTATCTTCAAATGTaGAAGGCTGTAATCTTTGGC | + |
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Preference number: 4 (lower is better) Translates to: TFRQSYHRCLLKTHFSSGHYLQM*KAVIFG Trigger: GCCAAAGATTACAGCCTTGCACATTTGAAGATAGTG...CCCACTTGAAAAATGTGTTTTCAGTAGGCATCGGTGGTAACTCTGCCTAAATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS-3UTR GCA 90 bp | ACATTTAGGCAGAGTTACCACCGATGCCTACTGAAAACACATTTTTCAAGTGGGAGGTTTTCAGTGATCTaGTGGAATATATGCAGGATG | + |
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Preference number: 4 (lower is better) Translates to: TFRQSYHRCLLKTHFSSGRFSVI*WNICRM Trigger: CATCCTGCATATATTCCAGCAGATCACTGAAAACCT...CCCACTTGAAAAATGTGTTTTCAGTAGGCATCGGTGGTAACTCTGCCTAAATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS-3UTR CCA 90 bp | ACATTTAGGCAGAGTTACCACCGATGCCTACTGAAAACACATTTTTCAAGTGGGATAAATAGTCAGTGCTaGCTGATGGAATCAGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: TFRQSYHRCLLKTHFSSGINSQC*LMESGH Trigger: ATGACCTGATTCCATCAGCCAGCACTGACTATTTAT...CCCACTTGAAAAATGTGTTTTCAGTAGGCATCGGTGGTAACTCTGCCTAAATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS-3UTR TCA 90 bp | TATTCTGACCTAAAAATTAAGACCACATTTAGGCAGAGTTACCACCGATGCCTATTTCGTCTCTGTGTTTaGTCATGTTCTGTACCTGGT | + |
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Preference number: 4 (lower is better) Translates to: YSDLKIKTTFRQSYHRCLFRLCV*SCSVPG Trigger: ACCAGGTACAGAACATGATCAAACACAGAGACGAAA...TAGGCATCGGTGGTAACTCTGCCTAAATGTGGTCTTAATTTTTAGGTCAGAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS-3UTR GCA 90 bp | CTAAAAATTAAGACCACATTTAGGCAGAGTTACCACCGATGCCTACTGAAAACACGAAGATCTTTGTTCTaGCTCTTCAGAAGTTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: LKIKTTFRQSYHRCLLKTRRSLF*LFRSSS Trigger: CGAAGAACTTCTGAAGAGGCAGAACAAAGATCTTCG...TGTTTTCAGTAGGCATCGGTGGTAACTCTGCCTAAATGTGGTCTTAATTTTTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS-3UTR GCA 90 bp | CTAAAAATTAAGACCACATTTAGGCAGAGTTACCACCGATGCCTACTGAAAACAGTTTCTTGGTCAGTCTaGTCAGACAGCAAAGATTCT | + |
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Preference number: 4 (lower is better) Translates to: LKIKTTFRQSYHRCLLKTVSWSV*SDSKDS Trigger: AGAATCTTTGCTGTCTGAGCAGACTGACCAAGAAAC...TGTTTTCAGTAGGCATCGGTGGTAACTCTGCCTAAATGTGGTCTTAATTTTTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS-3UTR CCA 90 bp | TATTCTGACCTAAAAATTAAGACCACATTTAGGCAGAGTTACCACCGATGCCTACGGGTTGTGTTTTCATaGTTCAAGGATTCATCTGGA | + |
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Preference number: 4 (lower is better) Translates to: YSDLKIKTTFRQSYHRCLRVVFS*FKDSSG Trigger: TCCAGATGAATCCTTGAACCATGAAAACACAACCCG...TAGGCATCGGTGGTAACTCTGCCTAAATGTGGTCTTAATTTTTAGGTCAGAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS-3UTR CCA 90 bp | TCTGACCTAAAAATTAAGACCACATTTAGGCAGAGTTACCACCGATGCCTACTGATCATGTTCTGTACCTaGTCTAGCATGAAATACAGT | + |
|
Preference number: 4 (lower is better) Translates to: SDLKIKTTFRQSYHRCLLIMFCT*SSMKYS Trigger: ACTGTATTTCATGCTAGACCAGGTACAGAACATGAT...CAGTAGGCATCGGTGGTAACTCTGCCTAAATGTGGTCTTAATTTTTAGGTCAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS-3UTR CCA 90 bp | TATTCTGACCTAAAAATTAAGACCACATTTAGGCAGAGTTACCACCGATGCCTAGATCAAATACTGGAGTaGTATCAGAAGTGTATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YSDLKIKTTFRQSYHRCLDQILE*YQKCIL Trigger: CAGAATACACTTCTGATACCACTCCAGTATTTGATC...TAGGCATCGGTGGTAACTCTGCCTAAATGTGGTCTTAATTTTTAGGTCAGAATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS-3UTR CCA 90 bp | CTAAAAATTAAGACCACATTTAGGCAGAGTTACCACCGATGCCTACTGAAAACATCCTTGATCAAATACTaGAGTGGTATCAGAAGTGTA | + |
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Preference number: 4 (lower is better) Translates to: LKIKTTFRQSYHRCLLKTSLIKY*SGIRSV Trigger: TACACTTCTGATACCACTCCAGTATTTGATCAAGGA...TGTTTTCAGTAGGCATCGGTGGTAACTCTGCCTAAATGTGGTCTTAATTTTTAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS-3UTR CCA 90 bp | CTAAAAATTAAGACCACATTTAGGCAGAGTTACCACCGATGCCTACTGAAAACATTTTCAGTGATCTGCTaGAATATATGCAGGATGTTG | + |
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Preference number: 4 (lower is better) Translates to: LKIKTTFRQSYHRCLLKTFSVIC*NICRML Trigger: CAACATCCTGCATATATTCCAGCAGATCACTGAAAA...TGTTTTCAGTAGGCATCGGTGGTAACTCTGCCTAAATGTGGTCTTAATTTTTAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS GCA 90 bp | TTAGGTGGTTGTGAAGTTCTCCTCTCAGATAGTCTGCGCTCTGCCTaGTGGGATGCTCTCCTCTCTGCATGGCCAGGCAATCTGTGCTCG | + |
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Preference number: 5 (lower is better) Translates to: LGGCEVLLSDSLRSA*WDALLSAWPGNLCS Trigger: CGAGCACAGATTGCCTGGCCATGCAGAGAGGAGAGCATCCCAGCAGGCAGAGCGCAGACTATCTGAGAGGAGAACTTCACAACCACCTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS CCA 90 bp | TCAGATAGTCTGCGCTCTGCCTGCTGGGATGCTCTCCTCTCTGCATaGCCAGGCAATCTGTGCTCGGTTGGCTGCGAAGATCTTTGTTCT | + |
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Preference number: 5 (lower is better) Translates to: SDSLRSACWDALLSA*PGNLCSVGCEDLCS Trigger: AGAACAAAGATCTTCGCAGCCAACCGAGCACAGATTGCCTGGCCATGCAGAGAGGAGAGCATCCCAGCAGGCAGAGCGCAGACTATCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS CCA 90 bp | TCTTCAGAAGTTCTTCGGCCAGTCTGTCTAGAACCTGCATTGGCTTaGCCGGATACCTTGTCACCAGTTGGCTCAGATGATCCAACCCCA | + |
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Preference number: 5 (lower is better) Translates to: SSEVLRPVCLEPALA*PDTLSPVGSDDPTP Trigger: TGGGGTTGGATCATCTGAGCCAACTGGTGACAAGGTATCCGGCCAAGCCAATGCAGGTTCTAGACAGACTGGCCGAAGAACTTCTGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS TCA 90 bp | CCAGTTGGCTCAGATGATCCAACCCCAGCATGTTCAGAACCTCTGTaGAGGGCCTGGCCTGCTCCTTCTATGTTGTTCTTCTCGTTATCT | + |
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Preference number: 5 (lower is better) Translates to: PVGSDDPTPACSEPL*RAWPAPSMLFFSLS Trigger: AGATAACGAGAAGAACAACATAGAAGGAGCAGGCCAGGCCCTTCACAGAGGTTCTGAACATGCTGGGGTTGGATCATCTGAGCCAACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS GCA 90 bp | ATGGCCAGGCAATCTGTGCTCGGTTGGCTGCGAAGATCTTTGTTCTaGCTCTTCAGAAGTTCTTCGGCCAGTCTGTCTAGAACCTGCATT | + |
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Preference number: 5 (lower is better) Translates to: MARQSVLGWLRRSLF*LFRSSSASLSRTCI Trigger: AATGCAGGTTCTAGACAGACTGGCCGAAGAACTTCTGAAGAGGCAGAACAAAGATCTTCGCAGCCAACCGAGCACAGATTGCCTGGCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS TCA 90 bp | TCTATCTTGCCAGAGGTTTTCCTCTCTGAATGGCTGGGGAGTTGCTaGTTAGGTGGTTGTGAAGTTCTCCTCTCAGATAGTCTGCGCTCT | + |
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Preference number: 5 (lower is better) Translates to: SILPEVFLSEWLGSC*LGGCEVLLSDSLRS Trigger: AGAGCGCAGACTATCTGAGAGGAGAACTTCACAACCACCTAATCAGCAACTCCCCAGCCATTCAGAGAGGAAAACCTCTGGCAAGATAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS CCA 90 bp | AACTCCGAAGTTTCTTGGTCAGTCTGCTCAGACAGCAAAGATTCTTaGCCATCTATCTTGCCAGAGGTTTTCCTCTCTGAATGGCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: NSEVSWSVCSDSKDS*PSILPEVFLSEWLG Trigger: CCCCAGCCATTCAGAGAGGAAAACCTCTGGCAAGATAGATGGCCAAGAATCTTTGCTGTCTGAGCAGACTGACCAAGAAACTTCGGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS-3UTR CAA 90 bp | ACATTTAGGCAGAGTTACCACCGATGCCTACTGAAAACACATTTTTCAAGTGGGGGTCTTCAAAAACGATaGGAGGGAACCGCCATCTGG | + |
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Preference number: 5 (lower is better) Translates to: TFRQSYHRCLLKTHFSSGGLQKR*EGTAIW Trigger: CCAGATGGCGGTTCCCTCCAATCGTTTTTGAAGACC...CCCACTTGAAAAATGTGTTTTCAGTAGGCATCGGTGGTAACTCTGCCTAAATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS-3UTR CAA 90 bp | TATTCTGACCTAAAAATTAAGACCACATTTAGGCAGAGTTACCACCGATGCCTAGCTTGGCCGGATACCTaGTCACCAGTTGGCTCAGAT | + |
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Preference number: 5 (lower is better) Translates to: YSDLKIKTTFRQSYHRCLAWPDT*SPVGSD Trigger: ATCTGAGCCAACTGGTGACAAGGTATCCGGCCAAGC...TAGGCATCGGTGGTAACTCTGCCTAAATGTGGTCTTAATTTTTAGGTCAGAATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS TCA 90 bp | GTTGTAGGCTTGGATAGTGGTGGCACTTTCTGTTTCCTCTGTAGTTaGAACTTTGGATGGGAGCTCTGCTTCACTATCTTCAAATGTGCA | + |
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Preference number: 5 (lower is better) Translates to: VVGLDSGGTFCFLCS*NFGWELCFTIFKCA Trigger: TGCACATTTGAAGATAGTGAAGCAGAGCTCCCATCCAAAGTTTCAACTACAGAGGAAACAGAAAGTGCCACCACTATCCAAGCCTACAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS CCA 90 bp | GGTTGTATTCTTGTTGTTGACTCCTTGCTGATAAATAGTCAGTGCTaGCTGATGGAATCAGGTCATCAAACTCCGAAGTTTCTTGGTCAG | + |
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Preference number: 5 (lower is better) Translates to: GCILVVDSLLINSQC*LMESGHQTPKFLGQ Trigger: CTGACCAAGAAACTTCGGAGTTTGATGACCTGATTCCATCAGCCAGCACTGACTATTTATCAGCAAGGAGTCAACAACAAGAATACAACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS-3UTR CAA 90 bp | ACATTTAGGCAGAGTTACCACCGATGCCTACTGAAAACACATTTTTCAAGTGGGTCTGTAGTTGAAACTTaGGATGGGAGCTCTGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: TFRQSYHRCLLKTHFSSGSVVET*DGSSAS Trigger: TGAAGCAGAGCTCCCATCCAAAGTTTCAACTACAGA...CCCACTTGAAAAATGTGTTTTCAGTAGGCATCGGTGGTAACTCTGCCTAAATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS-3UTR CAA 90 bp | TATTCTGACCTAAAAATTAAGACCACATTTAGGCAGAGTTACCACCGATGCCTATGGCTGCGAAGATCTTaGTTCTGCCTCTTCAGAAGT | + |
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Preference number: 5 (lower is better) Translates to: YSDLKIKTTFRQSYHRCLWLRRS*FCLFRS Trigger: ACTTCTGAAGAGGCAGAACAAAGATCTTCGCAGCCA...TAGGCATCGGTGGTAACTCTGCCTAAATGTGGTCTTAATTTTTAGGTCAGAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS-3UTR CAA 90 bp | TATTCTGACCTAAAAATTAAGACCACATTTAGGCAGAGTTACCACCGATGCCTAACTCTGACTGGATCTTaGAGAACTCCTTCCTTGATC | + |
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Preference number: 5 (lower is better) Translates to: YSDLKIKTTFRQSYHRCLTLTGS*RTPSLI Trigger: GATCAAGGAAGGAGTTCTCAAAGATCCAGTCAGAGT...TAGGCATCGGTGGTAACTCTGCCTAAATGTGGTCTTAATTTTTAGGTCAGAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS CCA 72 bp | CTGCGCTCTGCCTGCTGGGATGCTCTCCTCTCTGCATaGCCAGGCAATCTGTGCTCGGTTGGCTGCGAAGAT | + |
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Preference number: 6 (lower is better) Translates to: LRSACWDALLSA*PGNLCSVGCED Trigger: ATCTTCGCAGCCAACCGAGCACAGATTGCCTGGCCATGCAGAGAGGAGAGCATCCCAGCAGGCAGAGCGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS CCA 72 bp | GAAGTTCTCCTCTCAGATAGTCTGCGCTCTGCCTGCTaGGATGCTCTCCTCTCTGCATGGCCAGGCAATCTG | + |
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Preference number: 6 (lower is better) Translates to: EVLLSDSLRSAC*DALLSAWPGNL Trigger: CAGATTGCCTGGCCATGCAGAGAGGAGAGCATCCCAGCAGGCAGAGCGCAGACTATCTGAGAGGAGAACTTC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS GCA 72 bp | TGTGAAGTTCTCCTCTCAGATAGTCTGCGCTCTGCCTaGTGGGATGCTCTCCTCTCTGCATGGCCAGGCAAT | + |
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Preference number: 6 (lower is better) Translates to: CEVLLSDSLRSA*WDALLSAWPGN Trigger: ATTGCCTGGCCATGCAGAGAGGAGAGCATCCCAGCAGGCAGAGCGCAGACTATCTGAGAGGAGAACTTCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS TCA 72 bp | GGCTTGGCCGGATACCTTGTCACCAGTTGGCTCAGATaGTCCAACCCCAGCATGTTCAGAACCTCTGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: GLAGYLVTSWLR*SNPSMFRTSVK Trigger: CTTCACAGAGGTTCTGAACATGCTGGGGTTGGATCATCTGAGCCAACTGGTGACAAGGTATCCGGCCAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS GCA 72 bp | CCCAGCATGTTCAGAACCTCTGTGAAGGGCCTGGCCTaGTCCTTCTATGTTGTTCTTCTCGTTATCTGGGGC | + |
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Preference number: 6 (lower is better) Translates to: PSMFRTSVKGLA*SFYVVLLVIWG Trigger: GCCCCAGATAACGAGAAGAACAACATAGAAGGAGCAGGCCAGGCCCTTCACAGAGGTTCTGAACATGCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS CAA 72 bp | GTCTGTCTAGAACCTGCATTGGCTTGGCCGGATACCTaGTCACCAGTTGGCTCAGATGATCCAACCCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: VCLEPALAWPDT*SPVGSDDPTPA Trigger: TGCTGGGGTTGGATCATCTGAGCCAACTGGTGACAAGGTATCCGGCCAAGCCAATGCAGGTTCTAGACAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS CAA 72 bp | CTCTCCTCTCTGCATGGCCAGGCAATCTGTGCTCGGTaGGCTGCGAAGATCTTTGTTCTGCCTCTTCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: LSSLHGQAICAR*AAKIFVLPLQK Trigger: CTTCTGAAGAGGCAGAACAAAGATCTTCGCAGCCAACCGAGCACAGATTGCCTGGCCATGCAGAGAGGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS CAA 90 bp | CTTCGGCCAGTCTGTCTAGAACCTGCATTGGCTTGGCCGGATACCTaGTCACCAGTTGGCTCAGATGATCCAACCCCAGCATGTTCAGAA | + |
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Preference number: 6 (lower is better) Translates to: LRPVCLEPALAWPDT*SPVGSDDPTPACSE Trigger: TTCTGAACATGCTGGGGTTGGATCATCTGAGCCAACTGGTGACAAGGTATCCGGCCAAGCCAATGCAGGTTCTAGACAGACTGGCCGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS CCA 72 bp | GTTCTTCGGCCAGTCTGTCTAGAACCTGCATTGGCTTaGCCGGATACCTTGTCACCAGTTGGCTCAGATGAT | + |
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Preference number: 6 (lower is better) Translates to: VLRPVCLEPALA*PDTLSPVGSDD Trigger: ATCATCTGAGCCAACTGGTGACAAGGTATCCGGCCAAGCCAATGCAGGTTCTAGACAGACTGGCCGAAGAAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS CCA 72 bp | TCTCCTCTCTGCATGGCCAGGCAATCTGTGCTCGGTTaGCTGCGAAGATCTTTGTTCTGCCTCTTCAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: SPLCMARQSVLG*LRRSLFCLFRS Trigger: ACTTCTGAAGAGGCAGAACAAAGATCTTCGCAGCCAACCGAGCACAGATTGCCTGGCCATGCAGAGAGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS CAA 72 bp | TCAGAAGTTCTTCGGCCAGTCTGTCTAGAACCTGCATaGGCTTGGCCGGATACCTTGTCACCAGTTGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: SEVLRPVCLEPA*AWPDTLSPVGS Trigger: TGAGCCAACTGGTGACAAGGTATCCGGCCAAGCCAATGCAGGTTCTAGACAGACTGGCCGAAGAACTTCTGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS CAA 90 bp | TCTGCCTCTTCAGAAGTTCTTCGGCCAGTCTGTCTAGAACCTGCATaGGCTTGGCCGGATACCTTGTCACCAGTTGGCTCAGATGATCCA | + |
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Preference number: 6 (lower is better) Translates to: SASSEVLRPVCLEPA*AWPDTLSPVGSDDP Trigger: TGGATCATCTGAGCCAACTGGTGACAAGGTATCCGGCCAAGCCAATGCAGGTTCTAGACAGACTGGCCGAAGAACTTCTGAAGAGGCAGA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS TCA 72 bp | TCAGATGATCCAACCCCAGCATGTTCAGAACCTCTGTaGAGGGCCTGGCCTGCTCCTTCTATGTTGTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SDDPTPACSEPL*RAWPAPSMLFF Trigger: GAAGAACAACATAGAAGGAGCAGGCCAGGCCCTTCACAGAGGTTCTGAACATGCTGGGGTTGGATCATCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS CCA 72 bp | CTGGCCTGCTCCTTCTATGTTGTTCTTCTCGTTATCTaGGGCTCGGGTTGTGTTTTCATGGTTCAAGGATTC | + |
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Preference number: 6 (lower is better) Translates to: LACSFYVVLLVI*GSGCVFMVQGF Trigger: GAATCCTTGAACCATGAAAACACAACCCGAGCCCCAGATAACGAGAAGAACAACATAGAAGGAGCAGGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS CCA 72 bp | AAGGCTGTAATCTTTGGCCAGTTTCTCTGTAGTCGTTaGTGTCAGTTAGTGTTCGGCTCTCGATGTGGGCAA | + |
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Preference number: 6 (lower is better) Translates to: KAVIFGQFLCSR*CQLVFGSRCGQ Trigger: TTGCCCACATCGAGAGCCGAACACTAACTGACACCAACGACTACAGAGAAACTGGCCAAAGATTACAGCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS CAA 90 bp | GCTTGGATAGTGGTGGCACTTTCTGTTTCCTCTGTAGTTGAAACTTaGGATGGGAGCTCTGCTTCACTATCTTCAAATGTGCAAGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: AWIVVALSVSSVVET*DGSSASLSSNVQGC Trigger: ACAGCCTTGCACATTTGAAGATAGTGAAGCAGAGCTCCCATCCAAAGTTTCAACTACAGAGGAAACAGAAAGTGCCACCACTATCCAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS CCA 72 bp | AAACGATTGGAGGGAACCGCCATCTGGAACTCTGACTaGATCTTTGAGAACTCCTTCCTTGATCAAATACTG | + |
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Preference number: 6 (lower is better) Translates to: KRLEGTAIWNSD*IFENSFLDQIL Trigger: CAGTATTTGATCAAGGAAGGAGTTCTCAAAGATCCAGTCAGAGTTCCAGATGGCGGTTCCCTCCAATCGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS CCA 72 bp | TGCCTTTCGTCTCTGTGTTTGATCATGTTCTGTACCTaGTCTAGCATGAAATACAGTGGGTCATCTGGCCTT | + |
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Preference number: 6 (lower is better) Translates to: CLSSLCLIMFCT*SSMKYSGSSGL Trigger: AAGGCCAGATGACCCACTGTATTTCATGCTAGACCAGGTACAGAACATGATCAAACACAGAGACGAAAGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS CAA 90 bp | GAACCGCCATCTGGAACTCTGACTGGATCTTTGAGAACTCCTTCCTaGATCAAATACTGGAGTGGTATCAGAAGTGTATTCTGTGGTTTG | + |
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Preference number: 6 (lower is better) Translates to: EPPSGTLTGSLRTPS*IKYWSGIRSVFCGL Trigger: CAAACCACAGAATACACTTCTGATACCACTCCAGTATTTGATCAAGGAAGGAGTTCTCAAAGATCCAGTCAGAGTTCCAGATGGCGGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS TCA 72 bp | TGTTCGGCTCTCGATGTGGGCAAGTGTTTTGTAGTATaGGCGGTAGCCAGCCTGTTTTTCTGTTATATGTTT | + |
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Preference number: 6 (lower is better) Translates to: CSALDVGKCFVV*AVASLFFCYMF Trigger: AAACATATAACAGAAAAACAGGCTGGCTACCGCTCATACTACAAAACACTTGCCCACATCGAGAGCCGAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS TCA 72 bp | TTGGATAGTGGTGGCACTTTCTGTTTCCTCTGTAGTTaGAACTTTGGATGGGAGCTCTGCTTCACTATCTTC | + |
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Preference number: 6 (lower is better) Translates to: LDSGGTFCFLCS*NFGWELCFTIF Trigger: GAAGATAGTGAAGCAGAGCTCCCATCCAAAGTTTCAACTACAGAGGAAACAGAAAGTGCCACCACTATCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS GCA 72 bp | CTTTGGATGGGAGCTCTGCTTCACTATCTTCAAATGTaGAAGGCTGTAATCTTTGGCCAGTTTCTCTGTAGT | + |
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Preference number: 6 (lower is better) Translates to: LWMGALLHYLQM*KAVIFGQFLCS Trigger: ACTACAGAGAAACTGGCCAAAGATTACAGCCTTGCACATTTGAAGATAGTGAAGCAGAGCTCCCATCCAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS CAA 72 bp | GTGGTGGCACTTTCTGTTTCCTCTGTAGTTGAAACTTaGGATGGGAGCTCTGCTTCACTATCTTCAAATGTG | + |
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Preference number: 6 (lower is better) Translates to: VVALSVSSVVET*DGSSASLSSNV Trigger: CACATTTGAAGATAGTGAAGCAGAGCTCCCATCCAAAGTTTCAACTACAGAGGAAACAGAAAGTGCCACCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS TCA 72 bp | GTGGGTCATCTGGCCTTTCATAGACTAGGTTTTCAGTaGTCTGCTGGAATATATGCAGGATGTTGTGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: VGHLAFHRLGFQ*SAGIYAGCCVS Trigger: AGAAACACAACATCCTGCATATATTCCAGCAGATCACTGAAAACCTAGTCTATGAAAGGCCAGATGACCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS GCA 72 bp | ATTCTTGTTGTTGACTCCTTGCTGATAAATAGTCAGTaGTGGCTGATGGAATCAGGTCATCAAACTCCGAAG | + |
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Preference number: 6 (lower is better) Translates to: ILVVDSLLINSQ*WLMESGHQTPK Trigger: CTTCGGAGTTTGATGACCTGATTCCATCAGCCAGCACTGACTATTTATCAGCAAGGAGTCAACAACAAGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS CCA 72 bp | CTTGTTGTTGACTCCTTGCTGATAAATAGTCAGTGCTaGCTGATGGAATCAGGTCATCAAACTCCGAAGTTT | + |
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Preference number: 6 (lower is better) Translates to: LVVDSLLINSQC*LMESGHQTPKF Trigger: AAACTTCGGAGTTTGATGACCTGATTCCATCAGCCAGCACTGACTATTTATCAGCAAGGAGTCAACAACAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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| CDS CCA 72 bp | ACTGGATCTTTGAGAACTCCTTCCTTGATCAAATACTaGAGTGGTATCAGAAGTGTATTCTGTGGTTTGAAT | + |
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Preference number: 6 (lower is better) Translates to: TGSLRTPSLIKY*SGIRSVFCGLN Trigger: ATTCAAACCACAGAATACACTTCTGATACCACTCCAGTATTTGATCAAGGAAGGAGTTCTCAAAGATCCAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122078.3 |
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