Pregenerated sensors for TEX52 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079304Ensembl transcript IDs: ENSMUST00000100926.4, ENSMUST00000130785.4
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CGAGACTTTCAGATGACTGTGAGCTGCCATGTAGGTGCTGGGCATTaGACTCCAGTGCCCTTAACTGCTGAGCCATCTCCCCAGCCCCTC | + |
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Preference number: 1 (lower is better) Translates to: RDFQMTVSCHVGAGH*TPVPLTAEPSPQPL Trigger: GAGGGGCTGGGGAGATGGCTCAGCAGTTAAGGGCACTGGAGTTCAATGCCCAGCACCTACATGGCAGCTCACAGTCATCTGAAAGTCTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130785.4 |
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| 3UTR GCA 90 bp | CATCTCAGTATGTGGTCCATGCTGGTCTCCATCTTGACATCTTCTTaGTCCACCTTCACAGTGCTGGGATCACAGGTTTCTACCACCCTC | + |
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Preference number: 1 (lower is better) Translates to: HLSMWSMLVSILTSS*STFTVLGSQVSTTL Trigger: GAGGGTGGTAGAAACCTGTGATCCCAGCACTGTGAAGGTGGAGCAAGAAGATGTCAAGATGGAGACCAGCATGGACCACATACTGAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130785.4 |
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| 3UTR TCA 90 bp | CTCCACCTTCACAGTGCTGGGATCACAGGTTTCTACCACCCTCCCTaGCTCTATTTCAGGGTTCTGTCTAGATTCCAGATGTTCGTCACA | + |
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Preference number: 1 (lower is better) Translates to: LHLHSAGITGFYHPP*LYFRVLSRFQMFVT Trigger: TGTGACGAACATCTGGAATCTAGACAGAACCCTGAAATAGAGTCAGGGAGGGTGGTAGAAACCTGTGATCCCAGCACTGTGAAGGTGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130785.4 |
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| 3UTR-3UTR TCA 90 bp | TCCCTCAGACGAGACTTTCAGATGACTGTGAGCTGCCATGTAGGTGCTGGGCATAGTGCCCTTAACTGCTaGGCCATCTCCCCAGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: SLRRDFQMTVSCHVGAGHSALNC*AISPAP Trigger: AGGGGCTGGGGAGATGGCTCAGCAGTTAAGGGCACT...ATGCCCAGCACCTACATGGCAGCTCACAGTCATCTGAAAGTCTCGTCTGAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130785.4 |
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| 3UTR-3UTR TCA 90 bp | TCTACCACCCTCCCTGACTCTATTTCAGGGTTCTGTCTAGATTCCAGATGTTCGGCGAAGCGTAGCAGATaGCTTCCTCTTCCTCGCTGG | + |
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Preference number: 2 (lower is better) Translates to: STTLPDSISGFCLDSRCSAKRSR*LPLPRW Trigger: CCAGCGAGGAAGAGGAAGTCATCTGCTACGCTTCGC...CGAACATCTGGAATCTAGACAGAACCCTGAAATAGAGTCAGGGAGGGTGGTAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130785.4 |
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| 3UTR CAA 90 bp | CCATCTCAGTATGTGGTCCATGCTGGTCTCCATCTTGACATCTTCTaGCTCCACCTTCACAGTGCTGGGATCACAGGTTTCTACCACCCT | + |
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Preference number: 2 (lower is better) Translates to: PSQYVVHAGLHLDIF*LHLHSAGITGFYHP Trigger: AGGGTGGTAGAAACCTGTGATCCCAGCACTGTGAAGGTGGAGCAAGAAGATGTCAAGATGGAGACCAGCATGGACCACATACTGAGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130785.4 |
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| 3UTR CAA 90 bp | CATCCTTCTCTCCATCTCAGTATGTGGTCCATGCTGGTCTCCATCTaGACATCTTCTTGCTCCACCTTCACAGTGCTGGGATCACAGGTT | + |
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Preference number: 2 (lower is better) Translates to: HPSLHLSMWSMLVSI*TSSCSTFTVLGSQV Trigger: AACCTGTGATCCCAGCACTGTGAAGGTGGAGCAAGAAGATGTCAAGATGGAGACCAGCATGGACCACATACTGAGATGGAGAGAAGGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130785.4 |
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| 3UTR CAA 90 bp | CAGCACTCCACCACCGAGCTACACCTTAACCCAGTTATCCACTCTTaGCTTTCTTCATCCTTCTCTCCATCTCAGTATGTGGTCCATGCT | + |
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Preference number: 2 (lower is better) Translates to: QHSTTELHLNPVIHS*LSSSFSPSQYVVHA Trigger: AGCATGGACCACATACTGAGATGGAGAGAAGGATGAAGAAAGCAAAGAGTGGATAACTGGGTTAAGGTGTAGCTCGGTGGTGGAGTGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130785.4 |
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| 3UTR-3UTR TCA 90 bp | CTCCATCTTGACATCTTCTTGCTCCACCTTCACAGTGCTGGGATCACAGGTTTCAAACAACAACCCTGTTaGATAGTAGCAGATTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: LHLDIFLLHLHSAGITGFKQQPC*IVADFL Trigger: CAGAAAATCTGCTACTATTCAACAGGGTTGTTGTTT...GAAACCTGTGATCCCAGCACTGTGAAGGTGGAGCAAGAAGATGTCAAGATGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130785.4 |
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| 3UTR TCA 72 bp | CAGATGACTGTGAGCTGCCATGTAGGTGCTGGGCATTaGACTCCAGTGCCCTTAACTGCTGAGCCATCTCCC | + |
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Preference number: 3 (lower is better) Translates to: QMTVSCHVGAGH*TPVPLTAEPSP Trigger: GGGAGATGGCTCAGCAGTTAAGGGCACTGGAGTTCAATGCCCAGCACCTACATGGCAGCTCACAGTCATCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130785.4 |
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| 3UTR TCA 72 bp | AGGTGCTGGGCATTGAACTCCAGTGCCCTTAACTGCTaGGCCATCTCCCCAGCCCCTCACCTAGATTCTTTT | + |
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Preference number: 3 (lower is better) Translates to: RCWALNSSALNC*AISPAPHLDSF Trigger: AAAAGAATCTAGGTGAGGGGCTGGGGAGATGGCTCAGCAGTTAAGGGCACTGGAGTTCAATGCCCAGCACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130785.4 |
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| 3UTR TCA 72 bp | CACAGTGCTGGGATCACAGGTTTCTACCACCCTCCCTaGCTCTATTTCAGGGTTCTGTCTAGATTCCAGATG | + |
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Preference number: 3 (lower is better) Translates to: HSAGITGFYHPP*LYFRVLSRFQM Trigger: CATCTGGAATCTAGACAGAACCCTGAAATAGAGTCAGGGAGGGTGGTAGAAACCTGTGATCCCAGCACTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130785.4 |
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| 3UTR GCA 72 bp | ATGTGGTCCATGCTGGTCTCCATCTTGACATCTTCTTaGTCCACCTTCACAGTGCTGGGATCACAGGTTTCT | + |
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Preference number: 3 (lower is better) Translates to: MWSMLVSILTSS*STFTVLGSQVS Trigger: AGAAACCTGTGATCCCAGCACTGTGAAGGTGGAGCAAGAAGATGTCAAGATGGAGACCAGCATGGACCACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130785.4 |
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| 3UTR CCA 72 bp | AGAAGCCTGATACAGAGATGGCATGAGGCTAGAGGATaGTTGAAAGGTTGTTCTGTAGGCCCAGAGTCCTCA | + |
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Preference number: 3 (lower is better) Translates to: RSLIQRWHEARG*LKGCSVGPESS Trigger: TGAGGACTCTGGGCCTACAGAACAACCTTTCAACCATCCTCTAGCCTCATGCCATCTCTGTATCAGGCTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100926.4 |
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| 3UTR-3UTR CAA 90 bp | ATTAGAGGGAGTGAGATCCCTCAGACGAGACTTTCAGATGACTGTGAGCTGCCACCAGTTATCCACTCTTaGCTTTCTTCATCCTTCTCT | + |
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Preference number: 3 (lower is better) Translates to: IRGSEIPQTRLSDDCELPPVIHS*LSSSFS Trigger: AGAGAAGGATGAAGAAAGCAAAGAGTGGATAACTGG...TGGCAGCTCACAGTCATCTGAAAGTCTCGTCTGAGGGATCTCACTCCCTCTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130785.4 |
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| 3UTR-3UTR CAA 90 bp | CCTTCTCTCCATCTCAGTATGTGGTCCATGCTGGTCTCCATCTTGACATCTTCTGCCTGTAGTATTAAATaGAACAGTAGCACATTGACT | + |
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Preference number: 3 (lower is better) Translates to: PSLHLSMWSMLVSILTSSACSIK*NSSTLT Trigger: AGTCAATGTGCTACTGTTCAATTTAATACTACAGGC...AGAAGATGTCAAGATGGAGACCAGCATGGACCACATACTGAGATGGAGAGAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130785.4 |
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| CDS-3UTR CCA 90 bp | GCTAGAGGATGGTTGAAAGGTTGTTCTGTAGGCCCAGAGTCCTCAGTCTCCTGGGGACAGGAAGCTGTGTaGGCCCATCCAGGAGGGCGG | + |
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Preference number: 4 (lower is better) Translates to: ARGWLKGCSVGPESSVSWGQEAV*AHPGGR Trigger: CCGCCCTCCTGGATGGGCCCACACAGCTTCCTGTCC...CCAGGAGACTGAGGACTCTGGGCCTACAGAACAACCTTTCAACCATCCTCTAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100926.4 |
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| CDS-3UTR TCA 90 bp | GGTTGTTCTGTAGGCCCAGAGTCCTCAGTCTCCTGGGGTCTCTTGCTGAAGAAGACATCAAGCCACGTGTaGAAGCCCCAGGTGTGCTCG | + |
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Preference number: 4 (lower is better) Translates to: GCSVGPESSVSWGLLLKKTSSHV*KPQVCS Trigger: CGAGCACACCTGGGGCTTTCACACGTGGCTTGATGT...CTTCTTCAGCAAGAGACCCCAGGAGACTGAGGACTCTGGGCCTACAGAACAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100926.4 |
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| CDS-3UTR CCA 90 bp | CTCCATCTTGACATCTTCTTGCTCCACCTTCACAGTGCTGGGATCACAGGTTTCGGACAGGAAGCTGTGTaGGCCCATCCAGGAGGGCGG | + |
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Preference number: 4 (lower is better) Translates to: LHLDIFLLHLHSAGITGFGQEAV*AHPGGR Trigger: CCGCCCTCCTGGATGGGCCCACACAGCTTCCTGTCC...GAAACCTGTGATCCCAGCACTGTGAAGGTGGAGCAAGAAGATGTCAAGATGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130785.4 |
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| CDS-3UTR GCA 90 bp | GAAAGGTTGTTCTGTAGGCCCAGAGTCCTCAGTCTCCTGGGGTCTCTTGCTGAATCTGTGCATGGTGGCTaGTTCAGGGCCAGCTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: ERLFCRPRVLSLLGSLAESVHGG*FRASLW Trigger: CCACAAGCTGGCCCTGAAGCAGCCACCATGCACAGA...TTCAGCAAGAGACCCCAGGAGACTGAGGACTCTGGGCCTACAGAACAACCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100926.4 |
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| CDS-3UTR GCA 90 bp | GAAAGGTTGTTCTGTAGGCCCAGAGTCCTCAGTCTCCTGGGGTCTCTTGCTGAACCTTCACAAGGTCTTTaGTCAGGGGCACCGTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: ERLFCRPRVLSLLGSLAEPSQGL*SGAPWA Trigger: TGCCCACGGTGCCCCTGAGCAAAGACCTTGTGAAGG...TTCAGCAAGAGACCCCAGGAGACTGAGGACTCTGGGCCTACAGAACAACCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100926.4 |
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| CDS-3UTR CCA 90 bp | TGGTTGAAAGGTTGTTCTGTAGGCCCAGAGTCCTCAGTCTCCTGGGGTCTCTTGCAACTCTGTGCATGGTaGCTGCTTCAGGGCCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: WLKGCSVGPESSVSWGLLQLCAW*LLQGQL Trigger: AAGCTGGCCCTGAAGCAGCCACCATGCACAGAGTTG...CAAGAGACCCCAGGAGACTGAGGACTCTGGGCCTACAGAACAACCTTTCAACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100926.4 |
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| CDS-3UTR CCA 90 bp | GGTTGTTCTGTAGGCCCAGAGTCCTCAGTCTCCTGGGGTCTCTTGCTGAAGAAGATGAGGCTGATGATTTaGGCAGGGCCAGCTCTTGCA | + |
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Preference number: 4 (lower is better) Translates to: GCSVGPESSVSWGLLLKKMRLMI*AGPALA Trigger: TGCAAGAGCTGGCCCTGCCCAAATCATCAGCCTCAT...CTTCTTCAGCAAGAGACCCCAGGAGACTGAGGACTCTGGGCCTACAGAACAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100926.4 |
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| CDS-3UTR TCA 90 bp | CTCCATCTTGACATCTTCTTGCTCCACCTTCACAGTGCTGGGATCACAGGTTTCACATCAAGCCACGTGTaGAAGCCCCAGGTGTGCTCG | + |
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Preference number: 4 (lower is better) Translates to: LHLDIFLLHLHSAGITGFTSSHV*KPQVCS Trigger: CGAGCACACCTGGGGCTTTCACACGTGGCTTGATGT...GAAACCTGTGATCCCAGCACTGTGAAGGTGGAGCAAGAAGATGTCAAGATGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130785.4 |
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| CDS-3UTR TCA 90 bp | GGTTGTTCTGTAGGCCCAGAGTCCTCAGTCTCCTGGGGTCTCTTGCTGAAGAAGGTTCGCTCCTCAGCTTaGGTTTCTCCACTTCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: GCSVGPESSVSWGLLLKKVRSSA*VSPLPS Trigger: TGAAGGAAGTGGAGAAACTCAAGCTGAGGAGCGAAC...CTTCTTCAGCAAGAGACCCCAGGAGACTGAGGACTCTGGGCCTACAGAACAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100926.4 |
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| CDS-3UTR GCA 90 bp | ATTAGAGGGAGTGAGATCCCTCAGACGAGACTTTCAGATGACTGTGAGCTGCCATCTGTGCATGGTGGCTaGTTCAGGGCCAGCTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: IRGSEIPQTRLSDDCELPSVHGG*FRASLW Trigger: CCACAAGCTGGCCCTGAAGCAGCCACCATGCACAGA...TGGCAGCTCACAGTCATCTGAAAGTCTCGTCTGAGGGATCTCACTCCCTCTAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130785.4 |
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| CDS-3UTR TCA 90 bp | TCCCTCAGACGAGACTTTCAGATGACTGTGAGCTGCCATGTAGGTGCTGGGCATGTTCGCTCCTCAGCTTaGGTTTCTCCACTTCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: SLRRDFQMTVSCHVGAGHVRSSA*VSPLPS Trigger: TGAAGGAAGTGGAGAAACTCAAGCTGAGGAGCGAAC...ATGCCCAGCACCTACATGGCAGCTCACAGTCATCTGAAAGTCTCGTCTGAGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130785.4 |
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| CDS-3UTR GCA 90 bp | GTTGAAAGGTTGTTCTGTAGGCCCAGAGTCCTCAGTCTCCTGGGGTCTCTTGCTGGCAGGGCCAGCTCTTaGAGATGTTATTGGGAATTG | + |
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Preference number: 4 (lower is better) Translates to: VERLFCRPRVLSLLGSLAGRASS*RCYWEL Trigger: CAATTCCCAATAACATCTGCAAGAGCTGGCCCTGCC...AGCAAGAGACCCCAGGAGACTGAGGACTCTGGGCCTACAGAACAACCTTTCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100926.4 |
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| CDS-3UTR CCA 90 bp | CATGAGGCTAGAGGATGGTTGAAAGGTTGTTCTGTAGGCCCAGAGTCCTCAGTCACTCCTTGGTCTCTTTaGGGAGGAGGAACTCACGCT | + |
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Preference number: 4 (lower is better) Translates to: HEARGWLKGCSVGPESSVTPWSL*GGGTHA Trigger: AGCGTGAGTTCCTCCTCCCCAAAGAGACCAAGGAGT...GACTGAGGACTCTGGGCCTACAGAACAACCTTTCAACCATCCTCTAGCCTCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100926.4 |
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| CDS-3UTR CCA 90 bp | CCTTCTCTCCATCTCAGTATGTGGTCCATGCTGGTCTCCATCTTGACATCTTCTCAACTCTGTGCATGGTaGCTGCTTCAGGGCCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: PSLHLSMWSMLVSILTSSQLCAW*LLQGQL Trigger: AAGCTGGCCCTGAAGCAGCCACCATGCACAGAGTTG...AGAAGATGTCAAGATGGAGACCAGCATGGACCACATACTGAGATGGAGAGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130785.4 |
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| 3UTR CAA 72 bp | AGCCTGATACAGAGATGGCATGAGGCTAGAGGATGGTaGAAAGGTTGTTCTGTAGGCCCAGAGTCCTCAGTC | + |
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Preference number: 4 (lower is better) Translates to: SLIQRWHEARGW*KGCSVGPESSV Trigger: GACTGAGGACTCTGGGCCTACAGAACAACCTTTCAACCATCCTCTAGCCTCATGCCATCTCTGTATCAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100926.4 |
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| CDS-3UTR CCA 90 bp | AGGATGGTTGAAAGGTTGTTCTGTAGGCCCAGAGTCCTCAGTCTCCTGGGGTCTGAGGATTCTTTGGCATaGATCATCTTCAGGAAAGGC | + |
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Preference number: 4 (lower is better) Translates to: RMVERLFCRPRVLSLLGSEDSLA*IIFRKG Trigger: GCCTTTCCTGAAGATGATCCATGCCAAAGAATCCTC...AGACCCCAGGAGACTGAGGACTCTGGGCCTACAGAACAACCTTTCAACCATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100926.4 |
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| CDS-3UTR CCA 90 bp | AGGATGGTTGAAAGGTTGTTCTGTAGGCCCAGAGTCCTCAGTCTCCTGGGGTCTTTTTCTCTTTCCCTCTaGTGTTTTAGCAGGTCGTGC | + |
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Preference number: 4 (lower is better) Translates to: RMVERLFCRPRVLSLLGSFSLSL*CFSRSC Trigger: GCACGACCTGCTAAAACACCAGAGGGAAAGAGAAAA...AGACCCCAGGAGACTGAGGACTCTGGGCCTACAGAACAACCTTTCAACCATCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000100926.4 |
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| 3UTR CAA 72 bp | TATGTGGTCCATGCTGGTCTCCATCTTGACATCTTCTaGCTCCACCTTCACAGTGCTGGGATCACAGGTTTC | + |
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Preference number: 4 (lower is better) Translates to: YVVHAGLHLDIF*LHLHSAGITGF Trigger: GAAACCTGTGATCCCAGCACTGTGAAGGTGGAGCAAGAAGATGTCAAGATGGAGACCAGCATGGACCACATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130785.4 |
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| CDS-3UTR CCA 90 bp | ATTAGAGGGAGTGAGATCCCTCAGACGAGACTTTCAGATGACTGTGAGCTGCCACTGGTACGAGATACTTaGCTCAGGCTTGACTTTTGG | + |
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Preference number: 4 (lower is better) Translates to: IRGSEIPQTRLSDDCELPLVRDT*LRLDFW Trigger: CCAAAAGTCAAGCCTGAGCCAAGTATCTCGTACCAG...TGGCAGCTCACAGTCATCTGAAAGTCTCGTCTGAGGGATCTCACTCCCTCTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130785.4 |
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| CDS-3UTR CCA 90 bp | AATGTCTCCAGAAGCCTGATACAGAGATGGCATGAGGCTAGAGGATGGTTGAAATATTGGGAATTGGGTTaGGTAGGAACTGGAGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: NVSRSLIQRWHEARGWLKYWELG*VGTGGP Trigger: GGGGCCTCCAGTTCCTACCCAACCCAATTCCCAATA...TTTCAACCATCCTCTAGCCTCATGCCATCTCTGTATCAGGCTTCTGGAGACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100926.4 |
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| CDS-3UTR CCA 90 bp | GAGGCTAGAGGATGGTTGAAAGGTTGTTCTGTAGGCCCAGAGTCCTCAGTCTCCTCTTGCAGATGTTATTaGGAATTGGGTTGGGTAGGA | + |
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Preference number: 4 (lower is better) Translates to: EARGWLKGCSVGPESSVSSCRCY*ELGWVG Trigger: TCCTACCCAACCCAATTCCCAATAACATCTGCAAGA...GGAGACTGAGGACTCTGGGCCTACAGAACAACCTTTCAACCATCCTCTAGCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100926.4 |
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| CDS-3UTR TCA 90 bp | CTCCATCTCAGTATGTGGTCCATGCTGGTCTCCATCTTGACATCTTCTTGCTCCAAACTGTATGCTTCTTaGAGTTTGGCGGAGGTAGGA | + |
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Preference number: 4 (lower is better) Translates to: LHLSMWSMLVSILTSSCSKLYAS*SLAEVG Trigger: TCCTACCTCCGCCAAACTTCAAGAAGCATACAGTTT...GGAGCAAGAAGATGTCAAGATGGAGACCAGCATGGACCACATACTGAGATGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130785.4 |
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| CDS-3UTR CCA 90 bp | GGATCACAGGTTTCTACCACCCTCCCTGACTCTATTTCAGGGTTCTGTCTAGATCTCAGGCTTGACTTTTaGAGGGATGTTTTCTTCGGG | + |
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Preference number: 4 (lower is better) Translates to: GSQVSTTLPDSISGFCLDLRLDF*RDVFFG Trigger: CCCGAAGAAAACATCCCTCCAAAAGTCAAGCCTGAG...ATCTAGACAGAACCCTGAAATAGAGTCAGGGAGGGTGGTAGAAACCTGTGATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130785.4 |
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| CDS-3UTR CCA 90 bp | CTCTTGCTGAAGAAGGCTAGGCTGAAAATCCTAAAGCCCACCATGGTCTTCTCTCTGGTACGAGATACTTaGCTCAGGCTTGACTTTTGG | + |
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Preference number: 4 (lower is better) Translates to: LLLKKARLKILKPTMVFSLVRDT*LRLDFW Trigger: CCAAAAGTCAAGCCTGAGCCAAGTATCTCGTACCAG...AGAGAAGACCATGGTGGGCTTTAGGATTTTCAGCCTAGCCTTCTTCAGCAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100926.4 |
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| CDS-3UTR GCA 90 bp | TGGTTGAAAGGTTGTTCTGTAGGCCCAGAGTCCTCAGTCTCCTGGGGTCTCTTGGTTCTTACGATTATCTaGTTCCTTCTTTTCAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: WLKGCSVGPESSVSWGLLVLTII*FLLFKS Trigger: GGACTTGAAAAGAAGGAAGCAGATAATCGTAAGAAC...CAAGAGACCCCAGGAGACTGAGGACTCTGGGCCTACAGAACAACCTTTCAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100926.4 |
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| CDS-3UTR CCA 90 bp | AATGTCTCCAGAAGCCTGATACAGAGATGGCATGAGGCTAGAGGATGGTTGAAACTCAGGCTTGACTTTTaGAGGGATGTTTTCTTCGGG | + |
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Preference number: 4 (lower is better) Translates to: NVSRSLIQRWHEARGWLKLRLDF*RDVFFG Trigger: CCCGAAGAAAACATCCCTCCAAAAGTCAAGCCTGAG...TTTCAACCATCCTCTAGCCTCATGCCATCTCTGTATCAGGCTTCTGGAGACATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100926.4 |
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| CDS-3UTR CCA 90 bp | TGTCTAGATTCCAGATGTTCGTCACATCTCCCCTGTTCTACTAATGCAGTGTATACTCCTTGGTCTCTTTaGGGAGGAGGAACTCACGCT | + |
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Preference number: 4 (lower is better) Translates to: CLDSRCSSHLPCSTNAVYTPWSL*GGGTHA Trigger: AGCGTGAGTTCCTCCTCCCCAAAGAGACCAAGGAGT...ATACACTGCATTAGTAGAACAGGGGAGATGTGACGAACATCTGGAATCTAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130785.4 |
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| CDS-3UTR GCA 90 bp | ACCTTCACAGTGCTGGGATCACAGGTTTCTACCACCCTCCCTGACTCTATTTCAGTTCTTACGATTATCTaGTTCCTTCTTTTCAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: TFTVLGSQVSTTLPDSISVLTII*FLLFKS Trigger: GGACTTGAAAAGAAGGAAGCAGATAATCGTAAGAAC...TGAAATAGAGTCAGGGAGGGTGGTAGAAACCTGTGATCCCAGCACTGTGAAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130785.4 |
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| CDS-3UTR GCA 90 bp | AGATTCTTTTTATATCTCTGTGTAGTGCTGGGGATCGAACCCAGGACCCAACCTAGGCAAGAAACTGTATaGTTCTTGAAGTTTGGCGGA | + |
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Preference number: 4 (lower is better) Translates to: RFFLYLCVVLGIEPRTQPRQETV*FLKFGG Trigger: TCCGCCAAACTTCAAGAAGCATACAGTTTCTTGCCT...AGGTTGGGTCCTGGGTTCGATCCCCAGCACTACACAGAGATATAAAAAGAATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130785.4 |
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| CDS CCA 90 bp | AGGGCGGAGGGATGCCAGGCTGCGCAGCAGGGAGACGGTGGGCATTaGCGTGAGTCAAATGGCGCCAGACGTTACTGTCATAGGGTACGT | + |
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Preference number: 5 (lower is better) Translates to: RAEGCQAAQQGDGGH*RESNGARRYCHRVR Trigger: ACGTACCCTATGACAGTAACGTCTGGCGCCATTTGACTCACGCCAATGCCCACCGTCTCCCTGCTGCGCAGCCTGGCATCCCTCCGCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100926.4 ENSMUST00000130785.4 |
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| CDS TCA 90 bp | TGCATGGTGGCTGCTTCAGGGCCAGCTTGTGGTAGTCTTGTAGGGTaGAGCCCGGGAACTCCTTGGTCTCTTTGGGGAGGAGGAACTCAC | + |
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Preference number: 5 (lower is better) Translates to: CMVAASGPACGSLVG*SPGTPWSLWGGGTH Trigger: GTGAGTTCCTCCTCCCCAAAGAGACCAAGGAGTTCCCGGGCTTCACCCTACAAGACTACCACAAGCTGGCCCTGAAGCAGCCACCATGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100926.4 ENSMUST00000130785.4 |
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| CDS-3UTR CAA 90 bp | GGTTGTTCTGTAGGCCCAGAGTCCTCAGTCTCCTGGGGTCTCTTGCTGAAGAAGGGCGGAGGTAGGATGTaGCCATTGGCATCGAGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GCSVGPESSVSWGLLLKKGGGRM*PLASRG Trigger: TCCCCTCGATGCCAATGGCAACATCCTACCTCCGCC...CTTCTTCAGCAAGAGACCCCAGGAGACTGAGGACTCTGGGCCTACAGAACAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100926.4 |
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| CDS-3UTR CAA 90 bp | TGGTTGAAAGGTTGTTCTGTAGGCCCAGAGTCCTCAGTCTCCTGGGGTCTCTTGAAGCCCGGGAACTCCTaGGTCTCTTTGGGGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: WLKGCSVGPESSVSWGLLKPGNS*VSLGRR Trigger: CCTCCTCCCCAAAGAGACCAAGGAGTTCCCGGGCTT...CAAGAGACCCCAGGAGACTGAGGACTCTGGGCCTACAGAACAACCTTTCAACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100926.4 |
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| CDS GCA 90 bp | CAAGCCGGTCTTTTATCAGGGCTTGGTAGTCCTTCACAAGGTCTTTaGTCAGGGGCACCGTGGGCAGCCGAGCCAGTTTCAGGACCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: QAGLLSGLGSPSQGL*SGAPWAAEPVSGPF Trigger: AAAAGGTCCTGAAACTGGCTCGGCTGCCCACGGTGCCCCTGAGCAAAGACCTTGTGAAGGACTACCAAGCCCTGATAAAAGACCGGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100926.4 |
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| CDS GCA 90 bp | ACGTCCCACATCAAGCCACGTGTGAAAGCCCCAGGTGTGCTCGGCTaGATCCTTACTAGGATAGAGTACCTGGTGACGCACCTTAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: TSHIKPRVKAPGVLG*ILTRIEYLVTHLRL Trigger: AAGTCTAAGGTGCGTCACCAGGTACTCTATCCTAGTAAGGATGCAGCCGAGCACACCTGGGGCTTTCACACGTGGCTTGATGTGGGACGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100926.4 ENSMUST00000130785.4 |
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| CDS CCA 90 bp | AATGAGGCTGATGATTTGGGCAGGGCCAGCTCTTGCAGATGTTATTaGGAATTGGGTTGGGTAGGAACTGGAGGCCCCAAGGCACAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: NEADDLGRASSCRCY*ELGWVGTGGPKAQA Trigger: GGCTTGTGCCTTGGGGCCTCCAGTTCCTACCCAACCCAATTCCCAATAACATCTGCAAGAGCTGGCCCTGCCCAAATCATCAGCCTCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100926.4 |
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| CDS-3UTR CAA 90 bp | CTCCATCTTGACATCTTCTTGCTCCACCTTCACAGTGCTGGGATCACAGGTTTCGGCGGAGGTAGGATGTaGCCATTGGCATCGAGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LHLDIFLLHLHSAGITGFGGGRM*PLASRG Trigger: TCCCCTCGATGCCAATGGCAACATCCTACCTCCGCC...GAAACCTGTGATCCCAGCACTGTGAAGGTGGAGCAAGAAGATGTCAAGATGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130785.4 |
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| CDS-3UTR CAA 90 bp | GGTTGTTCTGTAGGCCCAGAGTCCTCAGTCTCCTGGGGTCTCTTGCTGAAGAAGTTATTGGGAATTGGGTaGGGTAGGAACTGGAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GCSVGPESSVSWGLLLKKLLGIG*GRNWRP Trigger: GGGCCTCCAGTTCCTACCCAACCCAATTCCCAATAA...CTTCTTCAGCAAGAGACCCCAGGAGACTGAGGACTCTGGGCCTACAGAACAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100926.4 |
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| CDS GCA 90 bp | CCTTTTCCTGGTAATGAGGCTGATGATTTGGGCAGGGCCAGCTCTTaGAGATGTTATTGGGAATTGGGTTGGGTAGGAACTGGAGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: PFPGNEADDLGRASS*RCYWELGWVGTGGP Trigger: GGGGCCTCCAGTTCCTACCCAACCCAATTCCCAATAACATCTGCAAGAGCTGGCCCTGCCCAAATCATCAGCCTCATTACCAGGAAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100926.4 |
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| CDS-3UTR CAA 90 bp | TCTCTCCATCTCAGTATGTGGTCCATGCTGGTCTCCATCTTGACATCTTCTTGCAAGCCCGGGAACTCCTaGGTCTCTTTGGGGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLHLSMWSMLVSILTSSCKPGNS*VSLGRR Trigger: CCTCCTCCCCAAAGAGACCAAGGAGTTCCCGGGCTT...GCAAGAAGATGTCAAGATGGAGACCAGCATGGACCACATACTGAGATGGAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130785.4 |
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| CDS TCA 90 bp | TGCCATTGGCATCGAGGGGAGGGGCCCTTAGTTCGCTCCTCAGCTTaGGTTTCTCCACTTCCTTCAGCTCCTTCACTGTTCTTACGATTA | + |
|
Preference number: 5 (lower is better) Translates to: CHWHRGEGPLVRSSA*VSPLPSAPSLFLRL Trigger: TAATCGTAAGAACAGTGAAGGAGCTGAAGGAAGTGGAGAAACTCAAGCTGAGGAGCGAACTAAGGGCCCCTCCCCTCGATGCCAATGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100926.4 ENSMUST00000130785.4 |
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| CDS CCA 90 bp | CCGAGCCAGTTTCAGGACCTTTTCCTGGTAATGAGGCTGATGATTTaGGCAGGGCCAGCTCTTGCAGATGTTATTGGGAATTGGGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PSQFQDLFLVMRLMI*AGPALADVIGNWVG Trigger: CCCAACCCAATTCCCAATAACATCTGCAAGAGCTGGCCCTGCCCAAATCATCAGCCTCATTACCAGGAAAAGGTCCTGAAACTGGCTCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100926.4 |
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| CDS-3UTR CAA 90 bp | GGATGGTTGAAAGGTTGTTCTGTAGGCCCAGAGTCCTCAGTCTCCTGGGGTCTCATTGGGGAGGATTCTTaGGCATGGATCATCTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GWLKGCSVGPESSVSWGLIGEDS*AWIIFR Trigger: CCTGAAGATGATCCATGCCAAAGAATCCTCCCCAAT...GAGACCCCAGGAGACTGAGGACTCTGGGCCTACAGAACAACCTTTCAACCATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100926.4 |
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| CDS-3UTR CAA 90 bp | ATGGTTGAAAGGTTGTTCTGTAGGCCCAGAGTCCTCAGTCTCCTGGGGTCTCTTGGGCAGGGCCAGCTCTaGCAGATGTTATTGGGAATT | + |
|
Preference number: 5 (lower is better) Translates to: MVERLFCRPRVLSLLGSLGQGQL*QMLLGI Trigger: AATTCCCAATAACATCTGCAAGAGCTGGCCCTGCCC...AAGAGACCCCAGGAGACTGAGGACTCTGGGCCTACAGAACAACCTTTCAACCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100926.4 |
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| CDS-3UTR CAA 90 bp | GTTGAAAGGTTGTTCTGTAGGCCCAGAGTCCTCAGTCTCCTGGGGTCTCTTGCTATGTACTGGTACTTCTaGAAGTTTGGCGGAGGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: VERLFCRPRVLSLLGSLAMYWYF*KFGGGR Trigger: CCTACCTCCGCCAAACTTCAAGAAGTACCAGTACAT...AGCAAGAGACCCCAGGAGACTGAGGACTCTGGGCCTACAGAACAACCTTTCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100926.4 |
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| CDS-3UTR CAA 90 bp | CTCTTGCTGAAGAAGGCTAGGCTGAAAATCCTAAAGCCCACCATGGTCTTCTCTAATGAGGCTGATGATTaGGGCAGGGCCAGCTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LLLKKARLKILKPTMVFSNEADD*GRASSC Trigger: GCAAGAGCTGGCCCTGCCCAAATCATCAGCCTCATT...AGAGAAGACCATGGTGGGCTTTAGGATTTTCAGCCTAGCCTTCTTCAGCAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100926.4 |
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| CDS-3UTR CAA 90 bp | GTTGAAAGGTTGTTCTGTAGGCCCAGAGTCCTCAGTCTCCTGGGGTCTCTTGCTATACTTGGCTCAGGCTaGACTTTTGGAGGGATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: VERLFCRPRVLSLLGSLAILGSG*TFGGMF Trigger: AAACATCCCTCCAAAAGTCAAGCCTGAGCCAAGTAT...AGCAAGAGACCCCAGGAGACTGAGGACTCTGGGCCTACAGAACAACCTTTCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100926.4 |
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| CDS CCA 90 bp | TTGGGGAGGATTCTTTGGCATGGATCATCTTCAGGAAAGGCTCCCTaGTACGAGATACTTGGCTCAGGCTTGACTTTTGGAGGGATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LGRILWHGSSSGKAP*YEILGSGLTFGGMF Trigger: AAACATCCCTCCAAAAGTCAAGCCTGAGCCAAGTATCTCGTACCAGGGAGCCTTTCCTGAAGATGATCCATGCCAAAGAATCCTCCCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100926.4 ENSMUST00000130785.4 |
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| CDS CCA 90 bp | GGAACTCACGCTGAGTCCAAGTCTGATAGATTGGGGAGGATTCTTTaGCATGGATCATCTTCAGGAAAGGCTCCCTGGTACGAGATACTT | + |
|
Preference number: 5 (lower is better) Translates to: GTHAESKSDRLGRIL*HGSSSGKAPWYEIL Trigger: AAGTATCTCGTACCAGGGAGCCTTTCCTGAAGATGATCCATGCCAAAGAATCCTCCCCAATCTATCAGACTTGGACTCAGCGTGAGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100926.4 ENSMUST00000130785.4 |
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| CDS-3UTR CAA 90 bp | CATGAGGCTAGAGGATGGTTGAAAGGTTGTTCTGTAGGCCCAGAGTCCTCAGTCTCCAAGTCTGATAGATaGGGGAGGATTCTTTGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: HEARGWLKGCSVGPESSVSKSDR*GRILWH Trigger: ATGCCAAAGAATCCTCCCCAATCTATCAGACTTGGA...GACTGAGGACTCTGGGCCTACAGAACAACCTTTCAACCATCCTCTAGCCTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100926.4 |
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| CDS-3UTR CAA 90 bp | GGATCACAGGTTTCTACCACCCTCCCTGACTCTATTTCAGGGTTCTGTCTAGATATACTTGGCTCAGGCTaGACTTTTGGAGGGATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: GSQVSTTLPDSISGFCLDILGSG*TFGGMF Trigger: AAACATCCCTCCAAAAGTCAAGCCTGAGCCAAGTAT...ATCTAGACAGAACCCTGAAATAGAGTCAGGGAGGGTGGTAGAAACCTGTGATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130785.4 |
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| CDS-3UTR CAA 90 bp | AGATTCTTTTTATATCTCTGTGTAGTGCTGGGGATCGAACCCAGGACCCAACCTATTGGGGAGGATTCTTaGGCATGGATCATCTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RFFLYLCVVLGIEPRTQPIGEDS*AWIIFR Trigger: CCTGAAGATGATCCATGCCAAAGAATCCTCCCCAAT...AGGTTGGGTCCTGGGTTCGATCCCCAGCACTACACAGAGATATAAAAAGAATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000130785.4 |
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| CDS-3UTR CAA 90 bp | TGTCTAGATTCCAGATGTTCGTCACATCTCCCCTGTTCTACTAATGCAGTGTATGCTGCTTCGAGCCTCTaGCATGGTAGGCAAGAAACT | + |
|
Preference number: 5 (lower is better) Translates to: CLDSRCSSHLPCSTNAVYAASSL*HGRQET Trigger: AGTTTCTTGCCTACCATGCAAGAGGCTCGAAGCAGC...ATACACTGCATTAGTAGAACAGGGGAGATGTGACGAACATCTGGAATCTAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130785.4 |
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| CDS GCA 90 bp | AGTTTCTCCACTTCCTTCAGCTCCTTCACTGTTCTTACGATTATCTaGTTCCTTCTTTTCAAGTCCACGACTATGGGGCTAGCACTGATG | + |
|
Preference number: 5 (lower is better) Translates to: SFSTSFSSFTVLTII*FLLFKSTTMGLALM Trigger: CATCAGTGCTAGCCCCATAGTCGTGGACTTGAAAAGAAGGAAGCAGATAATCGTAAGAACAGTGAAGGAGCTGAAGGAAGTGGAGAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100926.4 ENSMUST00000130785.4 |
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| CDS GCA 72 bp | GGAAGCTGTGTGGGCCCATCCAGGAGGGCGGAGGGATaGCAGGCTGCGCAGCAGGGAGACGGTGGGCATTGG | + |
|
Preference number: 6 (lower is better) Translates to: GSCVGPSRRAEG*QAAQQGDGGHW Trigger: CCAATGCCCACCGTCTCCCTGCTGCGCAGCCTGGCATCCCTCCGCCCTCCTGGATGGGCCCACACAGCTTCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100926.4 ENSMUST00000130785.4 |
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| CDS TCA 72 bp | GCTGCTTCAGGGCCAGCTTGTGGTAGTCTTGTAGGGTaGAGCCCGGGAACTCCTTGGTCTCTTTGGGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: AASGPACGSLVG*SPGTPWSLWGG Trigger: TCCTCCCCAAAGAGACCAAGGAGTTCCCGGGCTTCACCCTACAAGACTACCACAAGCTGGCCCTGAAGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100926.4 ENSMUST00000130785.4 |
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| CDS CCA 72 bp | GGTAGTCCTTCACAAGGTCTTTGCTCAGGGGCACCGTaGGCAGCCGAGCCAGTTTCAGGACCTTTTCCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: GSPSQGLCSGAP*AAEPVSGPFPG Trigger: ACCAGGAAAAGGTCCTGAAACTGGCTCGGCTGCCCACGGTGCCCCTGAGCAAAGACCTTGTGAAGGACTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100926.4 |
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| CDS CAA 90 bp | GCTGATGATTTGGGCAGGGCCAGCTCTTGCAGATGTTATTGGGAATaGGGTTGGGTAGGAACTGGAGGCCCCAAGGCACAAGCCTTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: ADDLGRASSCRCYWE*GWVGTGGPKAQAFH Trigger: GTGGAAGGCTTGTGCCTTGGGGCCTCCAGTTCCTACCCAACCCAATTCCCAATAACATCTGCAAGAGCTGGCCCTGCCCAAATCATCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100926.4 |
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| CDS TCA 72 bp | AAGGTAGCAGGCAAACGTCCCACATCAAGCCACGTGTaGAAGCCCCAGGTGTGCTCGGCTGCATCCTTACTA | + |
|
Preference number: 6 (lower is better) Translates to: KVAGKRPTSSHV*KPQVCSAASLL Trigger: TAGTAAGGATGCAGCCGAGCACACCTGGGGCTTTCACACGTGGCTTGATGTGGGACGTTTGCCTGCTACCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100926.4 ENSMUST00000130785.4 |
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| CDS GCA 72 bp | ATCAAGCCACGTGTGAAAGCCCCAGGTGTGCTCGGCTaGATCCTTACTAGGATAGAGTACCTGGTGACGCAC | + |
|
Preference number: 6 (lower is better) Translates to: IKPRVKAPGVLG*ILTRIEYLVTH Trigger: GTGCGTCACCAGGTACTCTATCCTAGTAAGGATGCAGCCGAGCACACCTGGGGCTTTCACACGTGGCTTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100926.4 ENSMUST00000130785.4 |
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| CDS GCA 72 bp | CTTTTATCAGGGCTTGGTAGTCCTTCACAAGGTCTTTaGTCAGGGGCACCGTGGGCAGCCGAGCCAGTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LLSGLGSPSQGL*SGAPWAAEPVS Trigger: TGAAACTGGCTCGGCTGCCCACGGTGCCCCTGAGCAAAGACCTTGTGAAGGACTACCAAGCCCTGATAAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100926.4 |
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| CDS CAA 72 bp | GCATCGAGGGGAGGGGCCCTTAGTTCGCTCCTCAGCTaGAGTTTCTCCACTTCCTTCAGCTCCTTCACTGTT | + |
|
Preference number: 6 (lower is better) Translates to: ASRGGALSSLLS*SFSTSFSSFTV Trigger: AACAGTGAAGGAGCTGAAGGAAGTGGAGAAACTCAAGCTGAGGAGCGAACTAAGGGCCCCTCCCCTCGATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100926.4 ENSMUST00000130785.4 |
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| CDS CAA 72 bp | TACTTCTTGAAGTTTGGCGGAGGTAGGATGTTGCCATaGGCATCGAGGGGAGGGGCCCTTAGTTCGCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: YFLKFGGGRMLP*ASRGGALSSLL Trigger: GAGGAGCGAACTAAGGGCCCCTCCCCTCGATGCCAATGGCAACATCCTACCTCCGCCAAACTTCAAGAAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100926.4 |
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| CDS CAA 72 bp | TTGGGCAGGGCCAGCTCTTGCAGATGTTATTGGGAATaGGGTTGGGTAGGAACTGGAGGCCCCAAGGCACAA | + |
|
Preference number: 6 (lower is better) Translates to: LGRASSCRCYWE*GWVGTGGPKAQ Trigger: TTGTGCCTTGGGGCCTCCAGTTCCTACCCAACCCAATTCCCAATAACATCTGCAAGAGCTGGCCCTGCCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100926.4 |
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| CDS CCA 72 bp | TACCTGGTGACGCACCTTAGACTTCAACTCTGTGCATaGTGGCTGCTTCAGGGCCAGCTTGTGGTAGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: YLVTHLRLQLCA*WLLQGQLVVVL Trigger: CAAGACTACCACAAGCTGGCCCTGAAGCAGCCACCATGCACAGAGTTGAAGTCTAAGGTGCGTCACCAGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100926.4 ENSMUST00000130785.4 |
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| CDS CAA 72 bp | TACTGGTACTTCTTGAAGTTTGGCGGAGGTAGGATGTaGCCATTGGCATCGAGGGGAGGGGCCCTTAGTTCG | + |
|
Preference number: 6 (lower is better) Translates to: YWYFLKFGGGRM*PLASRGGALSS Trigger: CGAACTAAGGGCCCCTCCCCTCGATGCCAATGGCAACATCCTACCTCCGCCAAACTTCAAGAAGTACCAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100926.4 |
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| CDS CAA 90 bp | ATGTACTGGTACTTCTTGAAGTTTGGCGGAGGTAGGATGTTGCCATaGGCATCGAGGGGAGGGGCCCTTAGTTCGCTCCTCAGCTTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: MYWYFLKFGGGRMLP*ASRGGALSSLLSLS Trigger: ACTCAAGCTGAGGAGCGAACTAAGGGCCCCTCCCCTCGATGCCAATGGCAACATCCTACCTCCGCCAAACTTCAAGAAGTACCAGTACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100926.4 |
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| CDS CAA 90 bp | GTAGATATGTACTGGTACTTCTTGAAGTTTGGCGGAGGTAGGATGTaGCCATTGGCATCGAGGGGAGGGGCCCTTAGTTCGCTCCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VDMYWYFLKFGGGRM*PLASRGGALSSLLS Trigger: GCTGAGGAGCGAACTAAGGGCCCCTCCCCTCGATGCCAATGGCAACATCCTACCTCCGCCAAACTTCAAGAAGTACCAGTACATATCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100926.4 |
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| CDS CAA 90 bp | TTGCCATTGGCATCGAGGGGAGGGGCCCTTAGTTCGCTCCTCAGCTaGAGTTTCTCCACTTCCTTCAGCTCCTTCACTGTTCTTACGATT | + |
|
Preference number: 6 (lower is better) Translates to: LPLASRGGALSSLLS*SFSTSFSSFTVLTI Trigger: AATCGTAAGAACAGTGAAGGAGCTGAAGGAAGTGGAGAAACTCAAGCTGAGGAGCGAACTAAGGGCCCCTCCCCTCGATGCCAATGGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100926.4 ENSMUST00000130785.4 |
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| CDS CAA 90 bp | CCCCAAGGCACAAGCCTTCCACCAGTAGATATGTACTGGTACTTCTaGAAGTTTGGCGGAGGTAGGATGTTGCCATTGGCATCGAGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: PQGTSLPPVDMYWYF*KFGGGRMLPLASRG Trigger: TCCCCTCGATGCCAATGGCAACATCCTACCTCCGCCAAACTTCAAGAAGTACCAGTACATATCTACTGGTGGAAGGCTTGTGCCTTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100926.4 |
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| CDS CAA 90 bp | GCCGAGCCAGTTTCAGGACCTTTTCCTGGTAATGAGGCTGATGATTaGGGCAGGGCCAGCTCTTGCAGATGTTATTGGGAATTGGGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: AEPVSGPFPGNEADD*GRASSCRCYWELGW Trigger: CCAACCCAATTCCCAATAACATCTGCAAGAGCTGGCCCTGCCCAAATCATCAGCCTCATTACCAGGAAAAGGTCCTGAAACTGGCTCGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100926.4 |
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| CDS CCA 72 bp | TTGCAGATGTTATTGGGAATTGGGTTGGGTAGGAACTaGAGGCCCCAAGGCACAAGCCTTCCACCAGTAGAT | + |
|
Preference number: 6 (lower is better) Translates to: LQMLLGIGLGRN*RPQGTSLPPVD Trigger: ATCTACTGGTGGAAGGCTTGTGCCTTGGGGCCTCCAGTTCCTACCCAACCCAATTCCCAATAACATCTGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100926.4 |
||
| CDS GCA 72 bp | GGTAATGAGGCTGATGATTTGGGCAGGGCCAGCTCTTaGAGATGTTATTGGGAATTGGGTTGGGTAGGAACT | + |
|
Preference number: 6 (lower is better) Translates to: GNEADDLGRASS*RCYWELGWVGT Trigger: AGTTCCTACCCAACCCAATTCCCAATAACATCTGCAAGAGCTGGCCCTGCCCAAATCATCAGCCTCATTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100926.4 |
||
| CDS CCA 72 bp | CCCCAAGGCACAAGCCTTCCACCAGTAGATATGTACTaGTACTTCTTGAAGTTTGGCGGAGGTAGGATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: PQGTSLPPVDMY*YFLKFGGGRML Trigger: CAACATCCTACCTCCGCCAAACTTCAAGAAGTACCAGTACATATCTACTGGTGGAAGGCTTGTGCCTTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100926.4 |
||
| CDS CAA 72 bp | GGAGGAGGAACTCACGCTGAGTCCAAGTCTGATAGATaGGGGAGGATTCTTTGGCATGGATCATCTTCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: GGGTHAESKSDR*GRILWHGSSSG Trigger: TCCTGAAGATGATCCATGCCAAAGAATCCTCCCCAATCTATCAGACTTGGACTCAGCGTGAGTTCCTCCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100926.4 ENSMUST00000130785.4 |
||
| CDS CAA 72 bp | AGCCTCTTGCATGGTAGGCAAGAAACTGTATGCTTCTaGAAGTTTGGCGGAGGTAGGATGTTGCCATTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SLLHGRQETVCF*KFGGGRMLPLA Trigger: TGCCAATGGCAACATCCTACCTCCGCCAAACTTCAAGAAGCATACAGTTTCTTGCCTACCATGCAAGAGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130785.4 |
||
| CDS CAA 72 bp | ACAAGCCTTCCACCAGTAGATATGTACTGGTACTTCTaGAAGTTTGGCGGAGGTAGGATGTTGCCATTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: TSLPPVDMYWYF*KFGGGRMLPLA Trigger: TGCCAATGGCAACATCCTACCTCCGCCAAACTTCAAGAAGTACCAGTACATATCTACTGGTGGAAGGCTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100926.4 |
||
| CDS GCA 72 bp | ACTTCCTTCAGCTCCTTCACTGTTCTTACGATTATCTaGTTCCTTCTTTTCAAGTCCACGACTATGGGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: TSFSSFTVLTII*FLLFKSTTMGL Trigger: TAGCCCCATAGTCGTGGACTTGAAAAGAAGGAAGCAGATAATCGTAAGAACAGTGAAGGAGCTGAAGGAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100926.4 ENSMUST00000130785.4 |
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