Pregenerated sensors for TEX45 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040340Ensembl transcript IDs: ENSMUST00000047265.13, ENSMUST00000159076.8, ENSMUST00000161680.2
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGACTCAGGCAAGGATACATAGGGATCTGGGGGCCCCGAGGATCTaGTTTCTCATGCCAGCAGCCAAGGTACTTGGGTGTGCCCATTGG | + |
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Preference number: 1 (lower is better) Translates to: LTQARIHRDLGAPRI*FLMPAAKVLGCAHW Trigger: CCAATGGGCACACCCAAGTACCTTGGCTGCTGGCATGAGAAAGCAGATCCTCGGGGCCCCCAGATCCCTATGTATCCTTGCCTGAGTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| 3UTR-3UTR CCA 90 bp | GGATCTGGGGGCCCCGAGGATCTGCTTTCTCATGCCAGCAGCCAAGGTACTTGGATGCTACTTAGCTTCTaGACCAATGGGCCCTGGTAC | + |
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Preference number: 2 (lower is better) Translates to: GSGGPEDLLSHASSQGTWMLLSF*TNGPWY Trigger: GTACCAGGGCCCATTGGTCCAGAAGCTAAGTAGCAT...CCAAGTACCTTGGCTGCTGGCATGAGAAAGCAGATCCTCGGGGCCCCCAGATCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| 3UTR-3UTR TCA 90 bp | ATCTGGGGGCCCCGAGGATCTGCTTTCTCATGCCAGCAGCCAAGGTACTTGGGTATGGGCCCTGGTACTTaGAGGGATACTCGTCTTGAT | + |
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Preference number: 2 (lower is better) Translates to: IWGPRGSAFSCQQPRYLGMGPGT*RDTRLD Trigger: ATCAAGACGAGTATCCCTTCAAGTACCAGGGCCCAT...ACCCAAGTACCTTGGCTGCTGGCATGAGAAAGCAGATCCTCGGGGCCCCCAGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| 3UTR-3UTR GCA 90 bp | ATCTGGGGGCCCCGAGGATCTGCTTTCTCATGCCAGCAGCCAAGGTACTTGGGTAGTCTAATTCACCTGTaGCCTCAGGGAGGTTACTCT | + |
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Preference number: 2 (lower is better) Translates to: IWGPRGSAFSCQQPRYLGSLIHL*PQGGYS Trigger: AGAGTAACCTCCCTGAGGGCACAGGTGAATTAGACT...ACCCAAGTACCTTGGCTGCTGGCATGAGAAAGCAGATCCTCGGGGCCCCCAGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| 3UTR-3UTR CCA 90 bp | GGATCTGCTTTCTCATGCCAGCAGCCAAGGTACTTGGGTGTGCCCATTGGCAGAACGTTGTCTGCCCAGTaGGGGCTCTATGTGACTGTA | + |
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Preference number: 2 (lower is better) Translates to: GSAFSCQQPRYLGVPIGRTLSAQ*GLYVTV Trigger: TACAGTCACATAGAGCCCCCACTGGGCAGACAACGT...TCTGCCAATGGGCACACCCAAGTACCTTGGCTGCTGGCATGAGAAAGCAGATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| 3UTR-3UTR TCA 90 bp | GGATCTGGGGGCCCCGAGGATCTGCTTTCTCATGCCAGCAGCCAAGGTACTTGGTCATTTGGTTCGTGGTaGAAAAGTCTAATTCACCTG | + |
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Preference number: 2 (lower is better) Translates to: GSGGPEDLLSHASSQGTWSFGSW*KSLIHL Trigger: CAGGTGAATTAGACTTTTTCACCACGAACCAAATGA...CCAAGTACCTTGGCTGCTGGCATGAGAAAGCAGATCCTCGGGGCCCCCAGATCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGGGGCCCCGAGGATCTGCTTTCTCATGCCAGCAGCCAAGGTACTTGGGTGTAATAGTCTGAGCTCATaGAGGTTTGGAAGAAGTTTC | + |
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Preference number: 2 (lower is better) Translates to: LGAPRICFLMPAAKVLGCNSLSS*RFGRSF Trigger: GAAACTTCTTCCAAACCTCCATGAGCTCAGACTATT...ACACCCAAGTACCTTGGCTGCTGGCATGAGAAAGCAGATCCTCGGGGCCCCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| 3UTR-3UTR CCA 90 bp | TGCATGCTACTTAGCTTCTGGACCAATGGGCCCTGGTACTTGAAGGGATACTCGGAGCTCATGGAGGTTTaGAAGAAGTTTCCGAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: CMLLSFWTNGPWYLKGYSELMEV*KKFPSS Trigger: GCTGCTCGGAAACTTCTTCCAAACCTCCATGAGCTC...CGAGTATCCCTTCAAGTACCAGGGCCCATTGGTCCAGAAGCTAAGTAGCATGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| 3UTR-3UTR TCA 90 bp | TGCATGCTACTTAGCTTCTGGACCAATGGGCCCTGGTACTTGAAGGGATACTCGAGTGGGGGCTCTATGTaGCTGTATTTGCACTTCTGT | + |
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Preference number: 2 (lower is better) Translates to: CMLLSFWTNGPWYLKGYSSGGSM*LYLHFC Trigger: ACAGAAGTGCAAATACAGTCACATAGAGCCCCCACT...CGAGTATCCCTTCAAGTACCAGGGCCCATTGGTCCAGAAGCTAAGTAGCATGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| 3UTR-3UTR TCA 90 bp | ATGCTACTTAGCTTCTGGACCAATGGGCCCTGGTACTTGAAGGGATACTCGTCTGTTTCCGAGCAGCTTTaGGTCTCCCAAGATTATGTG | + |
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Preference number: 2 (lower is better) Translates to: MLLSFWTNGPWYLKGYSSVSEQL*VSQDYV Trigger: CACATAATCTTGGGAGACTCAAAGCTGCTCGGAAAC...AGACGAGTATCCCTTCAAGTACCAGGGCCCATTGGTCCAGAAGCTAAGTAGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| 3UTR-3UTR GCA 90 bp | ATGCTACTTAGCTTCTGGACCAATGGGCCCTGGTACTTGAAGGGATACTCGTCTGCTCGAACTATTCCATaGGGCTTCATCATCATTTGG | + |
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Preference number: 2 (lower is better) Translates to: MLLSFWTNGPWYLKGYSSARTIP*GFIIIW Trigger: CCAAATGATGATGAAGCCGCATGGAATAGTTCGAGC...AGACGAGTATCCCTTCAAGTACCAGGGCCCATTGGTCCAGAAGCTAAGTAGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| 3UTR CAA 90 bp | GTACTTGAAGGGATACTCGTCTTGATTCTGAGTAGAGAAGAAACGTaGTCTGCCCAGTGGGGGCTCTATGTGACTGTATTTGCACTTCTG | + |
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Preference number: 2 (lower is better) Translates to: VLEGILVLILSREET*SAQWGLYVTVFALL Trigger: CAGAAGTGCAAATACAGTCACATAGAGCCCCCACTGGGCAGACAACGTTTCTTCTCTACTCAGAATCAAGACGAGTATCCCTTCAAGTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGAAGAAACGTTGTCTGCCCAGTGGGGGCTCTATGTGACTGTATTTGCACTTCCAACAAAGAGAACTTaGGGGTTCTTTGTTTTATGG | + |
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Preference number: 2 (lower is better) Translates to: REETLSAQWGLYVTVFALPTKRT*GFFVLW Trigger: CCATAAAACAAAGAACCCTCAAGTTCTCTTTGTTGG...AAGTGCAAATACAGTCACATAGAGCCCCCACTGGGCAGACAACGTTTCTTCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| 3UTR GCA 72 bp | ATAGGGATCTGGGGGCCCCGAGGATCTGCTTTCTCATaGCAGCAGCCAAGGTACTTGGGTGTGCCCATTGGC | + |
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Preference number: 3 (lower is better) Translates to: IGIWGPRGSAFS*QQPRYLGVPIG Trigger: GCCAATGGGCACACCCAAGTACCTTGGCTGCTGGCATGAGAAAGCAGATCCTCGGGGCCCCCAGATCCCTAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| 3UTR GCA 72 bp | AGGTACTTGGGTGTGCCCATTGGCAGATGGCTCTCATaGATGCTACTTAGCTTCTGGACCAATGGGCCCTGG | + |
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Preference number: 3 (lower is better) Translates to: RYLGVPIGRWLS*MLLSFWTNGPW Trigger: CCAGGGCCCATTGGTCCAGAAGCTAAGTAGCATGCATGAGAGCCATCTGCCAATGGGCACACCCAAGTACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| 3UTR CCA 72 bp | GAGGATCTGCTTTCTCATGCCAGCAGCCAAGGTACTTaGGTGTGCCCATTGGCAGATGGCTCTCATGCATGC | + |
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Preference number: 3 (lower is better) Translates to: EDLLSHASSQGT*VCPLADGSHAC Trigger: GCATGCATGAGAGCCATCTGCCAATGGGCACACCCAAGTACCTTGGCTGCTGGCATGAGAAAGCAGATCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| 3UTR GCA 72 bp | CTGCTTTCTCATGCCAGCAGCCAAGGTACTTGGGTGTaGCCATTGGCAGATGGCTCTCATGCATGCTACTTA | + |
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Preference number: 3 (lower is better) Translates to: LLSHASSQGTWV*PLADGSHACYL Trigger: TAAGTAGCATGCATGAGAGCCATCTGCCAATGGGCACACCCAAGTACCTTGGCTGCTGGCATGAGAAAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| 3UTR-3UTR CAA 90 bp | CTCGTCTTGATTCTGAGTAGAGAAGAAACGTTGTCTGCCCAGTGGGGGCTCTATGAACTTGAGGGTTCTTaGTTTTATGGGGGTAGTCGG | + |
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Preference number: 3 (lower is better) Translates to: LVLILSREETLSAQWGLYELEGS*FYGGSR Trigger: CCGACTACCCCCATAAAACAAAGAACCCTCAAGTTC...ATAGAGCCCCCACTGGGCAGACAACGTTTCTTCTCTACTCAGAATCAAGACGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| 3UTR GCA 72 bp | AACAAATCTTCAGTGATAGAGGCTCGAACTATTCCATaGGGCTTCATCATCATTTGGTTCGTGGTGAAAAAG | + |
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Preference number: 3 (lower is better) Translates to: NKSSVIEARTIP*GFIIIWFVVKK Trigger: CTTTTTCACCACGAACCAAATGATGATGAAGCCGCATGGAATAGTTCGAGCCTCTATCACTGAAGATTTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| CDS-3UTR TCA 90 bp | CTGGGGGCCCCGAGGATCTGCTTTCTCATGCCAGCAGCCAAGGTACTTGGGTGTGGGGCTGGACCAAGGTaGCAGCGGAATAGGCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: LGAPRICFLMPAAKVLGCGAGPR*QRNRLG Trigger: TCCCAGCCTATTCCGCTGTCACCTTGGTCCAGCCCC...ACACCCAAGTACCTTGGCTGCTGGCATGAGAAAGCAGATCCTCGGGGCCCCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| CDS-3UTR CCA 90 bp | GGATCTGGGGGCCCCGAGGATCTGCTTTCTCATGCCAGCAGCCAAGGTACTTGGGGACCAACGTTCACCTaGTGGATGTGGGCTGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: GSGGPEDLLSHASSQGTWGPTFT*WMWAAA Trigger: GGCTGCAGCCCACATCCACCAGGTGAACGTTGGTCC...CCAAGTACCTTGGCTGCTGGCATGAGAAAGCAGATCCTCGGGGCCCCCAGATCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| CDS-3UTR TCA 90 bp | CTGGGGGCCCCGAGGATCTGCTTTCTCATGCCAGCAGCCAAGGTACTTGGGTGTGGCGTAGAAGAACTTTaGGGAGGTATGGAGGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: LGAPRICFLMPAAKVLGCGVEEL*GGMEAA Trigger: GGCAGCCTCCATACCTCCTCAAAGTTCTTCTACGCC...ACACCCAAGTACCTTGGCTGCTGGCATGAGAAAGCAGATCCTCGGGGCCCCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| CDS-3UTR CCA 90 bp | ATCTGGGGGCCCCGAGGATCTGCTTTCTCATGCCAGCAGCCAAGGTACTTGGGTTTAGGACCCCCTAGATaGCTGCAGGGCACACAAGGC | + |
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Preference number: 4 (lower is better) Translates to: IWGPRGSAFSCQQPRYLGLGPPR*LQGTQG Trigger: GCCTTGTGTGCCCTGCAGCCATCTAGGGGGTCCTAA...ACCCAAGTACCTTGGCTGCTGGCATGAGAAAGCAGATCCTCGGGGCCCCCAGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| CDS-3UTR GCA 90 bp | CTGGGGGCCCCGAGGATCTGCTTTCTCATGCCAGCAGCCAAGGTACTTGGGTGTCCCTTTGGAAGATTGTaGCTTGCTGTGGTGCTGACG | + |
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Preference number: 4 (lower is better) Translates to: LGAPRICFLMPAAKVLGCPFGRL*LAVVLT Trigger: CGTCAGCACCACAGCAAGGCACAATCTTCCAAAGGG...ACACCCAAGTACCTTGGCTGCTGGCATGAGAAAGCAGATCCTCGGGGCCCCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| CDS-3UTR TCA 90 bp | GGATCTGGGGGCCCCGAGGATCTGCTTTCTCATGCCAGCAGCCAAGGTACTTGGACCCAAAGAAAAGTGTaGGGCCTTGAGGAACTCCAG | + |
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Preference number: 4 (lower is better) Translates to: GSGGPEDLLSHASSQGTWTQRKV*GLEELQ Trigger: CTGGAGTTCCTCAAGGCCTCACACTTTTCTTTGGGT...CCAAGTACCTTGGCTGCTGGCATGAGAAAGCAGATCCTCGGGGCCCCCAGATCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| CDS-3UTR GCA 90 bp | CTGGGGGCCCCGAGGATCTGCTTTCTCATGCCAGCAGCCAAGGTACTTGGGTGTCTTATCTGCATGGCTTaGGAGTGCTCAATTGCTCGC | + |
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Preference number: 4 (lower is better) Translates to: LGAPRICFLMPAAKVLGCLICMA*ECSIAR Trigger: GCGAGCAATTGAGCACTCGCAAGCCATGCAGATAAG...ACACCCAAGTACCTTGGCTGCTGGCATGAGAAAGCAGATCCTCGGGGCCCCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| CDS-3UTR CCA 90 bp | CTGGGGGCCCCGAGGATCTGCTTTCTCATGCCAGCAGCCAAGGTACTTGGGTGTATGTGGGCTGCAGCCTaGACCTTGTCATACCTGTAT | + |
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Preference number: 4 (lower is better) Translates to: LGAPRICFLMPAAKVLGCMWAAA*TLSYLY Trigger: ATACAGGTATGACAAGGTCCAGGCTGCAGCCCACAT...ACACCCAAGTACCTTGGCTGCTGGCATGAGAAAGCAGATCCTCGGGGCCCCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| CDS-3UTR CCA 90 bp | GGATCTGCTTTCTCATGCCAGCAGCCAAGGTACTTGGGTGTGCCCATTGGCAGAAACTTTGAGGAGGTATaGAGGCTGCCAGGGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: GSAFSCQQPRYLGVPIGRNFEEV*RLPGPG Trigger: CCCTGGCCCTGGCAGCCTCCATACCTCCTCAAAGTT...TCTGCCAATGGGCACACCCAAGTACCTTGGCTGCTGGCATGAGAAAGCAGATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| CDS-3UTR CCA 90 bp | TGCATGCTACTTAGCTTCTGGACCAATGGGCCCTGGTACTTGAAGGGATACTCGCCAACGTTCACCTGGTaGATGTGGGCTGCAGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: CMLLSFWTNGPWYLKGYSPTFTW*MWAAAW Trigger: CCAGGCTGCAGCCCACATCCACCAGGTGAACGTTGG...CGAGTATCCCTTCAAGTACCAGGGCCCATTGGTCCAGAAGCTAAGTAGCATGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| 3UTR CAA 72 bp | CGAGGATCTGCTTTCTCATGCCAGCAGCCAAGGTACTaGGGTGTGCCCATTGGCAGATGGCTCTCATGCATG | + |
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Preference number: 4 (lower is better) Translates to: RGSAFSCQQPRY*GVPIGRWLSCM Trigger: CATGCATGAGAGCCATCTGCCAATGGGCACACCCAAGTACCTTGGCTGCTGGCATGAGAAAGCAGATCCTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| CDS-3UTR TCA 90 bp | ATCTGGGGGCCCCGAGGATCTGCTTTCTCATGCCAGCAGCCAAGGTACTTGGGTTCCTTTCAGGATGTTTaGCTCCGGAGTCTTATCATG | + |
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Preference number: 4 (lower is better) Translates to: IWGPRGSAFSCQQPRYLGSFQDV*LRSLIM Trigger: CATGATAAGACTCCGGAGTCAAACATCCTGAAAGGA...ACCCAAGTACCTTGGCTGCTGGCATGAGAAAGCAGATCCTCGGGGCCCCCAGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| CDS-3UTR CCA 90 bp | TGCATGCTACTTAGCTTCTGGACCAATGGGCCCTGGTACTTGAAGGGATACTCGGACAGCGGAATAGGCTaGGAAGTCCCTGTGCGATGT | + |
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Preference number: 4 (lower is better) Translates to: CMLLSFWTNGPWYLKGYSDSGIG*EVPVRC Trigger: ACATCGCACAGGGACTTCCCAGCCTATTCCGCTGTC...CGAGTATCCCTTCAAGTACCAGGGCCCATTGGTCCAGAAGCTAAGTAGCATGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| 3UTR CAA 72 bp | TCTCATGCCAGCAGCCAAGGTACTTGGGTGTGCCCATaGGCAGATGGCTCTCATGCATGCTACTTAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: SHASSQGTWVCP*ADGSHACYLAS Trigger: AGAAGCTAAGTAGCATGCATGAGAGCCATCTGCCAATGGGCACACCCAAGTACCTTGGCTGCTGGCATGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| CDS-3UTR GCA 90 bp | GGATCTGCTTTCTCATGCCAGCAGCCAAGGTACTTGGGTGTGCCCATTGGCAGAGCCATAGTCAGTACGTaGAATGGACAAGTTGAGACC | + |
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Preference number: 4 (lower is better) Translates to: GSAFSCQQPRYLGVPIGRAIVST*NGQVET Trigger: GGTCTCAACTTGTCCATTGCACGTACTGACTATGGC...TCTGCCAATGGGCACACCCAAGTACCTTGGCTGCTGGCATGAGAAAGCAGATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| CDS-3UTR GCA 90 bp | AGAGAAGAAACGTTGTCTGCCCAGTGGGGGCTCTATGTGACTGTATTTGCACTTCTGGTGGATGTGGGCTaGAGCCTGGACCTTGTCATA | + |
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Preference number: 4 (lower is better) Translates to: REETLSAQWGLYVTVFALLVDVG*SLDLVI Trigger: TATGACAAGGTCCAGGCTGCAGCCCACATCCACCAG...AAGTGCAAATACAGTCACATAGAGCCCCCACTGGGCAGACAACGTTTCTTCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| CDS-3UTR CCA 90 bp | ATGCTACTTAGCTTCTGGACCAATGGGCCCTGGTACTTGAAGGGATACTCGTCTACACATCAAGGCTGGTaGGCTTGGGAGAGCTTGGAA | + |
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Preference number: 4 (lower is better) Translates to: MLLSFWTNGPWYLKGYSSTHQGW*AWESLE Trigger: TTCCAAGCTCTCCCAAGCCCACCAGCCTTGATGTGT...AGACGAGTATCCCTTCAAGTACCAGGGCCCATTGGTCCAGAAGCTAAGTAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| 3UTR CAA 72 bp | GACCAATGGGCCCTGGTACTTGAAGGGATACTCGTCTaGATTCTGAGTAGAGAAGAAACGTTGTCTGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: DQWALVLEGILV*ILSREETLSAQ Trigger: CTGGGCAGACAACGTTTCTTCTCTACTCAGAATCAAGACGAGTATCCCTTCAAGTACCAGGGCCCATTGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| CDS-3UTR GCA 90 bp | ATGCTACTTAGCTTCTGGACCAATGGGCCCTGGTACTTGAAGGGATACTCGTCTTGCAGATTGCTTATCTaGATGGCTTGCGAGTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: MLLSFWTNGPWYLKGYSSCRLLI*MACECS Trigger: TGAGCACTCGCAAGCCATGCAGATAAGCAATCTGCA...AGACGAGTATCCCTTCAAGTACCAGGGCCCATTGGTCCAGAAGCTAAGTAGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| CDS-3UTR GCA 90 bp | AGAGAAGAAACGTTGTCTGCCCAGTGGGGGCTCTATGTGACTGTATTTGCACTTCGTGCAAGTGCAGATTaGTTATCTGCATGGCTTGCG | + |
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Preference number: 4 (lower is better) Translates to: REETLSAQWGLYVTVFALRASAD*LSAWLA Trigger: CGCAAGCCATGCAGATAAGCAATCTGCACTTGCACG...AAGTGCAAATACAGTCACATAGAGCCCCCACTGGGCAGACAACGTTTCTTCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| CDS-3UTR CCA 90 bp | ATGCTACTTAGCTTCTGGACCAATGGGCCCTGGTACTTGAAGGGATACTCGTCTAAGGCTCTGGCTCTTTaGAGTAGAAGTAGTCATTCA | + |
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Preference number: 4 (lower is better) Translates to: MLLSFWTNGPWYLKGYSSKALAL*SRSSHS Trigger: TGAATGACTACTTCTACTCCAAAGAGCCAGAGCCTT...AGACGAGTATCCCTTCAAGTACCAGGGCCCATTGGTCCAGAAGCTAAGTAGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| CDS-3UTR CCA 90 bp | TGCATGCTACTTAGCTTCTGGACCAATGGGCCCTGGTACTTGAAGGGATACTCGAAGAACAAAAGGCTCTaGCTCTTTGGAGTAGAAGTA | + |
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Preference number: 4 (lower is better) Translates to: CMLLSFWTNGPWYLKGYSKNKRL*LFGVEV Trigger: TACTTCTACTCCAAAGAGCCAGAGCCTTTTGTTCTT...CGAGTATCCCTTCAAGTACCAGGGCCCATTGGTCCAGAAGCTAAGTAGCATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| 3UTR CAA 72 bp | GGGATACTCGTCTTGATTCTGAGTAGAGAAGAAACGTaGTCTGCCCAGTGGGGGCTCTATGTGACTGTATTT | + |
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Preference number: 4 (lower is better) Translates to: GILVLILSREET*SAQWGLYVTVF Trigger: AAATACAGTCACATAGAGCCCCCACTGGGCAGACAACGTTTCTTCTCTACTCAGAATCAAGACGAGTATCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| CDS GCA 90 bp | GAACAGGCGGTCTCCAGGACCAACGTTCACCTGGTGGATGTGGGCTaGAGCCTGGACCTTGTCATACCTGTATGGGGACAGCCCCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: EQAVSRTNVHLVDVG*SLDLVIPVWGQPLR Trigger: CCTCAGGGGCTGTCCCCATACAGGTATGACAAGGTCCAGGCTGCAGCCCACATCCACCAGGTGAACGTTGGTCCTGGAGACCGCCTGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047265.13 ENSMUST00000159076.8 ENSMUST00000161680.2 |
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| CDS TCA 90 bp | GCCAGGAGGCTGTGTCGCAGGAGGTGGCTCACCGTAGAAGAACTTTaGGGAGGTATGGAGGCTGCCAGGGCCAGGGCACCAGTTTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: ARRLCRRRWLTVEEL*GGMEAARARAPVSF Trigger: AAAGGAAACTGGTGCCCTGGCCCTGGCAGCCTCCATACCTCCTCAAAGTTCTTCTACGGTGAGCCACCTCCTGCGACACAGCCTCCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047265.13 ENSMUST00000161680.2 |
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| CDS TCA 90 bp | TGTCGGCCAGGAGGCTGTGTCGCAGGAGGTGGCGTAGAAGAACTTTaGGGAGGTATGGAGGCTGCCAGGGCCAGGGCACCAGTTTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: CRPGGCVAGGGVEEL*GGMEAARARAPVSF Trigger: AAAGGAAACTGGTGCCCTGGCCCTGGCAGCCTCCATACCTCCTCAAAGTTCTTCTACGCCACCTCCTGCGACACAGCCTCCTGGCCGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| CDS CCA 90 bp | TCATGGAACAGGCGGTCTCCAGGACCAACGTTCACCTGGTGGATGTaGGCTGCAGCCTGGACCTTGTCATACCTGTATGGGGACAGCCCC | + |
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Preference number: 5 (lower is better) Translates to: SWNRRSPGPTFTWWM*AAAWTLSYLYGDSP Trigger: GGGGCTGTCCCCATACAGGTATGACAAGGTCCAGGCTGCAGCCCACATCCACCAGGTGAACGTTGGTCCTGGAGACCGCCTGTTCCATGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047265.13 ENSMUST00000159076.8 ENSMUST00000161680.2 |
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| CDS CCA 90 bp | CACCTGGTGGATGTGGGCTGCAGCCTGGACCTTGTCATACCTGTATaGGGACAGCCCCTGAGGTGTGTAGGTCTGCTTCACGAGGGAACA | + |
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Preference number: 5 (lower is better) Translates to: HLVDVGCSLDLVIPV*GQPLRCVGLLHEGT Trigger: TGTTCCCTCGTGAAGCAGACCTACACACCTCAGGGGCTGTCCCCATACAGGTATGACAAGGTCCAGGCTGCAGCCCACATCCACCAGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047265.13 ENSMUST00000159076.8 ENSMUST00000161680.2 |
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| CDS CCA 90 bp | GTTCTGTCATGGAACAGGCGGTCTCCAGGACCAACGTTCACCTGGTaGATGTGGGCTGCAGCCTGGACCTTGTCATACCTGTATGGGGAC | + |
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Preference number: 5 (lower is better) Translates to: VLSWNRRSPGPTFTW*MWAAAWTLSYLYGD Trigger: GTCCCCATACAGGTATGACAAGGTCCAGGCTGCAGCCCACATCCACCAGGTGAACGTTGGTCCTGGAGACCGCCTGTTCCATGACAGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047265.13 ENSMUST00000159076.8 ENSMUST00000161680.2 |
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| CDS CCA 90 bp | GTAGTTCTGTCATGGAACAGGCGGTCTCCAGGACCAACGTTCACCTaGTGGATGTGGGCTGCAGCCTGGACCTTGTCATACCTGTATGGG | + |
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Preference number: 5 (lower is better) Translates to: VVLSWNRRSPGPTFT*WMWAAAWTLSYLYG Trigger: CCCATACAGGTATGACAAGGTCCAGGCTGCAGCCCACATCCACCAGGTGAACGTTGGTCCTGGAGACCGCCTGTTCCATGACAGAACTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047265.13 ENSMUST00000159076.8 ENSMUST00000161680.2 |
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| CDS-3UTR CAA 90 bp | GGATCTGCTTTCTCATGCCAGCAGCCAAGGTACTTGGGTGTGCCCATTGGCAGATCAAGGCTGGTGGGCTaGGGAGAGCTTGGAACTGCT | + |
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Preference number: 5 (lower is better) Translates to: GSAFSCQQPRYLGVPIGRSRLVG*GELGTA Trigger: AGCAGTTCCAAGCTCTCCCAAGCCCACCAGCCTTGA...TCTGCCAATGGGCACACCCAAGTACCTTGGCTGCTGGCATGAGAAAGCAGATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| CDS CCA 90 bp | GTTTACACTGGAGGAGGCCCTCTTACACATCAAGGCTGGTGGGCTTaGGAGAGCTTGGAACTGCTTCTTGTAGGAGGTGTCTTTCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: VYTGGGPLTHQGWWA*ESLELLLVGGVFLS Trigger: GGACAGAAAGACACCTCCTACAAGAAGCAGTTCCAAGCTCTCCCAAGCCCACCAGCCTTGATGTGTAAGAGGGCCTCCTCCAGTGTAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047265.13 ENSMUST00000159076.8 ENSMUST00000161680.2 |
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| CDS-3UTR CAA 90 bp | ATGCTACTTAGCTTCTGGACCAATGGGCCCTGGTACTTGAAGGGATACTCGTCTGCTGCAGCCTGGACCTaGTCATACCTGTATGGGGAC | + |
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Preference number: 5 (lower is better) Translates to: MLLSFWTNGPWYLKGYSSAAAWT*SYLYGD Trigger: GTCCCCATACAGGTATGACAAGGTCCAGGCTGCAGC...AGACGAGTATCCCTTCAAGTACCAGGGCCCATTGGTCCAGAAGCTAAGTAGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| CDS-3UTR CAA 90 bp | TGCATGCTACTTAGCTTCTGGACCAATGGGCCCTGGTACTTGAAGGGATACTCGGAAAAGTGTGAGGCCTaGAGGAACTCCAGGGACAAC | + |
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Preference number: 5 (lower is better) Translates to: CMLLSFWTNGPWYLKGYSEKCEA*RNSRDN Trigger: GTTGTCCCTGGAGTTCCTCAAGGCCTCACACTTTTC...CGAGTATCCCTTCAAGTACCAGGGCCCATTGGTCCAGAAGCTAAGTAGCATGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| CDS-3UTR CAA 90 bp | CTCGTCTTGATTCTGAGTAGAGAAGAAACGTTGTCTGCCCAGTGGGGGCTCTATCTTCCCTTTGGAAGATaGTGCCTTGCTGTGGTGCTG | + |
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Preference number: 5 (lower is better) Translates to: LVLILSREETLSAQWGLYLPFGR*CLAVVL Trigger: CAGCACCACAGCAAGGCACAATCTTCCAAAGGGAAG...ATAGAGCCCCCACTGGGCAGACAACGTTTCTTCTCTACTCAGAATCAAGACGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| CDS-3UTR CAA 90 bp | GGATCTGCTTTCTCATGCCAGCAGCCAAGGTACTTGGGTGTGCCCATTGGCAGATTCCTTTCAGGATGTTaGACTCCGGAGTCTTATCAT | + |
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Preference number: 5 (lower is better) Translates to: GSAFSCQQPRYLGVPIGRFLSGC*TPESYH Trigger: ATGATAAGACTCCGGAGTCAAACATCCTGAAAGGAA...TCTGCCAATGGGCACACCCAAGTACCTTGGCTGCTGGCATGAGAAAGCAGATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| CDS CAA 72 bp | GCGGCATGCGCAGCTGCTTCCTGTCCCCCGAGGGCATaGAATCCCGGTCAAAGAGGAGGCGTGCGCTTCGGA | + |
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Preference number: 6 (lower is better) Translates to: AACAAASCPPRA*NPGQRGGVRFG Trigger: TCCGAAGCGCACGCCTCCTCTTTGACCGGGATTCAATGCCCTCGGGGGACAGGAAGCAGCTGCGCATGCCGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047265.13 ENSMUST00000159076.8 ENSMUST00000161680.2 |
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| CDS TCA 72 bp | GGAGGCTGTGTCGCAGGAGGTGGCGTAGAAGAACTTTaGGGAGGTATGGAGGCTGCCAGGGCCAGGGCACCA | + |
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Preference number: 6 (lower is better) Translates to: GGCVAGGGVEEL*GGMEAARARAP Trigger: TGGTGCCCTGGCCCTGGCAGCCTCCATACCTCCTCAAAGTTCTTCTACGCCACCTCCTGCGACACAGCCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| CDS CAA 72 bp | GCTGTGTCGCAGGAGGTGGCTCACCGTAGAAGAACTTaGAGGAGGTATGGAGGCTGCCAGGGCCAGGGCACC | + |
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Preference number: 6 (lower is better) Translates to: AVSQEVAHRRRT*RRYGGCQGQGT Trigger: GGTGCCCTGGCCCTGGCAGCCTCCATACCTCCTCAAAGTTCTTCTACGGTGAGCCACCTCCTGCGACACAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047265.13 ENSMUST00000161680.2 |
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| CDS CAA 72 bp | AGGAGGCTGTGTCGCAGGAGGTGGCGTAGAAGAACTTaGAGGAGGTATGGAGGCTGCCAGGGCCAGGGCACC | + |
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Preference number: 6 (lower is better) Translates to: RRLCRRRWRRRT*RRYGGCQGQGT Trigger: GGTGCCCTGGCCCTGGCAGCCTCCATACCTCCTCAAAGTTCTTCTACGCCACCTCCTGCGACACAGCCTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| CDS CAA 90 bp | GGCCAGGAGGCTGTGTCGCAGGAGGTGGCTCACCGTAGAAGAACTTaGAGGAGGTATGGAGGCTGCCAGGGCCAGGGCACCAGTTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: GQEAVSQEVAHRRRT*RRYGGCQGQGTSFL Trigger: AAGGAAACTGGTGCCCTGGCCCTGGCAGCCTCCATACCTCCTCAAAGTTCTTCTACGGTGAGCCACCTCCTGCGACACAGCCTCCTGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047265.13 ENSMUST00000161680.2 |
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| CDS CAA 90 bp | CTGTCGGCCAGGAGGCTGTGTCGCAGGAGGTGGCGTAGAAGAACTTaGAGGAGGTATGGAGGCTGCCAGGGCCAGGGCACCAGTTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: LSARRLCRRRWRRRT*RRYGGCQGQGTSFL Trigger: AAGGAAACTGGTGCCCTGGCCCTGGCAGCCTCCATACCTCCTCAAAGTTCTTCTACGCCACCTCCTGCGACACAGCCTCCTGGCCGACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| CDS TCA 72 bp | CCCCTAGATGGCTGCAGGGCACACAAGGCTGAGGGGTaGTGGCATCATAGGGCGGATAGTGTGCCTGGTACG | + |
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Preference number: 6 (lower is better) Translates to: PLDGCRAHKAEG*WHHRADSVPGT Trigger: CGTACCAGGCACACTATCCGCCCTATGATGCCATCACCCCTCAGCCTTGTGTGCCCTGCAGCCATCTAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047265.13 ENSMUST00000159076.8 ENSMUST00000161680.2 |
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| CDS TCA 72 bp | CTGTGTCGCAGGAGGTGGCTCACCGTAGAAGAACTTTaGGGAGGTATGGAGGCTGCCAGGGCCAGGGCACCA | + |
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Preference number: 6 (lower is better) Translates to: LCRRRWLTVEEL*GGMEAARARAP Trigger: TGGTGCCCTGGCCCTGGCAGCCTCCATACCTCCTCAAAGTTCTTCTACGGTGAGCCACCTCCTGCGACACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047265.13 ENSMUST00000161680.2 |
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| CDS CCA 72 bp | GGACACCTGTCGGCCAGGAGGCTGTGTCGCAGGAGGTaGCGTAGAAGAACTTTGAGGAGGTATGGAGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: GHLSARRLCRRR*RRRTLRRYGGC Trigger: GCAGCCTCCATACCTCCTCAAAGTTCTTCTACGCCACCTCCTGCGACACAGCCTCCTGGCCGACAGGTGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159076.8 |
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| CDS CCA 72 bp | AGGCGGTCTCCAGGACCAACGTTCACCTGGTGGATGTaGGCTGCAGCCTGGACCTTGTCATACCTGTATGGG | + |
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Preference number: 6 (lower is better) Translates to: RRSPGPTFTWWM*AAAWTLSYLYG Trigger: CCCATACAGGTATGACAAGGTCCAGGCTGCAGCCCACATCCACCAGGTGAACGTTGGTCCTGGAGACCGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047265.13 ENSMUST00000159076.8 ENSMUST00000161680.2 |
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| CDS CCA 72 bp | TGGAACAGGCGGTCTCCAGGACCAACGTTCACCTGGTaGATGTGGGCTGCAGCCTGGACCTTGTCATACCTG | + |
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Preference number: 6 (lower is better) Translates to: WNRRSPGPTFTW*MWAAAWTLSYL Trigger: CAGGTATGACAAGGTCCAGGCTGCAGCCCACATCCACCAGGTGAACGTTGGTCCTGGAGACCGCCTGTTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047265.13 ENSMUST00000159076.8 ENSMUST00000161680.2 |
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| CDS CCA 72 bp | TCATGGAACAGGCGGTCTCCAGGACCAACGTTCACCTaGTGGATGTGGGCTGCAGCCTGGACCTTGTCATAC | + |
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Preference number: 6 (lower is better) Translates to: SWNRRSPGPTFT*WMWAAAWTLSY Trigger: GTATGACAAGGTCCAGGCTGCAGCCCACATCCACCAGGTGAACGTTGGTCCTGGAGACCGCCTGTTCCATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047265.13 ENSMUST00000159076.8 ENSMUST00000161680.2 |
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| CDS CCA 72 bp | GGAGGAGGCCCTCTTACACATCAAGGCTGGTGGGCTTaGGAGAGCTTGGAACTGCTTCTTGTAGGAGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: GGGPLTHQGWWA*ESLELLLVGGV Trigger: GACACCTCCTACAAGAAGCAGTTCCAAGCTCTCCCAAGCCCACCAGCCTTGATGTGTAAGAGGGCCTCCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047265.13 ENSMUST00000159076.8 ENSMUST00000161680.2 |
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| CDS GCA 72 bp | AAGTCCCTGTGCGATGTGCCCTGCATAGTGCCATCATaGAGCCGCGGATCAGGACCCAAAGAAAAGTGTGAG | + |
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Preference number: 6 (lower is better) Translates to: KSLCDVPCIVPS*SRGSGPKEKCE Trigger: CTCACACTTTTCTTTGGGTCCTGATCCGCGGCTGCATGATGGCACTATGCAGGGCACATCGCACAGGGACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047265.13 ENSMUST00000159076.8 ENSMUST00000161680.2 |
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| CDS GCA 72 bp | GCTTCACGAGGGAACACAGGGGACTATAGCCAACCTTaGTGTCTCCTAGGTTTACACTGGAGGAGGCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: ASRGNTGDYSQP*CLLGLHWRRPS Trigger: AGAGGGCCTCCTCCAGTGTAAACCTAGGAGACAGCAAGGTTGGCTATAGTCCCCTGTGTTCCCTCGTGAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047265.13 ENSMUST00000159076.8 ENSMUST00000161680.2 |
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| CDS TCA 72 bp | CTGGCCAGCCATAGTCAGTACGTGCAATGGACAAGTTaGGACCAGGACGCATATCCGCGTGCAAGTGCAGAT | + |
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Preference number: 6 (lower is better) Translates to: LASHSQYVQWTS*DQDAYPRASAD Trigger: ATCTGCACTTGCACGCGGATATGCGTCCTGGTCTCAACTTGTCCATTGCACGTACTGACTATGGCTGGCCAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047265.13 ENSMUST00000159076.8 ENSMUST00000161680.2 |
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| CDS CCA 72 bp | TACACTGGAGGAGGCCCTCTTACACATCAAGGCTGGTaGGCTTGGGAGAGCTTGGAACTGCTTCTTGTAGGA | + |
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Preference number: 6 (lower is better) Translates to: YTGGGPLTHQGW*AWESLELLLVG Trigger: TCCTACAAGAAGCAGTTCCAAGCTCTCCCAAGCCCACCAGCCTTGATGTGTAAGAGGGCCTCCTCCAGTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047265.13 ENSMUST00000159076.8 ENSMUST00000161680.2 |
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| CDS CCA 72 bp | GACTATAGCCAACCTTGCTGTCTCCTAGGTTTACACTaGAGGAGGCCCTCTTACACATCAAGGCTGGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: DYSQPCCLLGLH*RRPSYTSRLVG Trigger: GCCCACCAGCCTTGATGTGTAAGAGGGCCTCCTCCAGTGTAAACCTAGGAGACAGCAAGGTTGGCTATAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047265.13 ENSMUST00000159076.8 ENSMUST00000161680.2 |
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| CDS GCA 72 bp | TGCAAGTGCAGATTGCTTATCTGCATGGCTTGCGAGTaGTCAATTGCTCGCTCCCGTAGCTCATCTTGCGAC | + |
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Preference number: 6 (lower is better) Translates to: CKCRLLICMACE*SIARSRSSSCD Trigger: GTCGCAAGATGAGCTACGGGAGCGAGCAATTGAGCACTCGCAAGCCATGCAGATAAGCAATCTGCACTTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047265.13 ENSMUST00000159076.8 ENSMUST00000161680.2 |
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| CDS GCA 72 bp | GCAATGGACAAGTTGAGACCAGGACGCATATCCGCGTaGAAGTGCAGATTGCTTATCTGCATGGCTTGCGAG | + |
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Preference number: 6 (lower is better) Translates to: AMDKLRPGRISA*KCRLLICMACE Trigger: CTCGCAAGCCATGCAGATAAGCAATCTGCACTTGCACGCGGATATGCGTCCTGGTCTCAACTTGTCCATTGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047265.13 ENSMUST00000159076.8 ENSMUST00000161680.2 |
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| CDS CCA 72 bp | GTTTACACTGGAGGAGGCCCTCTTACACATCAAGGCTaGTGGGCTTGGGAGAGCTTGGAACTGCTTCTTGTA | + |
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Preference number: 6 (lower is better) Translates to: VYTGGGPLTHQG*WAWESLELLLV Trigger: TACAAGAAGCAGTTCCAAGCTCTCCCAAGCCCACCAGCCTTGATGTGTAAGAGGGCCTCCTCCAGTGTAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047265.13 ENSMUST00000159076.8 ENSMUST00000161680.2 |
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| CDS TCA 72 bp | GCCAGGGCCAGGGCACCAGTTTCCTTTCAGGATGTTTaGCTCCGGAGTCTTATCATGGTGAAGAACAAAAGG | + |
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Preference number: 6 (lower is better) Translates to: ARARAPVSFQDV*LRSLIMVKNKR Trigger: CCTTTTGTTCTTCACCATGATAAGACTCCGGAGTCAAACATCCTGAAAGGAAACTGGTGCCCTGGCCCTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047265.13 ENSMUST00000159076.8 ENSMUST00000161680.2 |
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| CDS CAA 72 bp | TGCCAGGGCCAGGGCACCAGTTTCCTTTCAGGATGTTaGACTCCGGAGTCTTATCATGGTGAAGAACAAAAG | + |
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Preference number: 6 (lower is better) Translates to: CQGQGTSFLSGC*TPESYHGEEQK Trigger: CTTTTGTTCTTCACCATGATAAGACTCCGGAGTCAAACATCCTGAAAGGAAACTGGTGCCCTGGCCCTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047265.13 ENSMUST00000159076.8 ENSMUST00000161680.2 |
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| CDS TCA 72 bp | AAGTTTCCGAGCAGCTTTGAGTCTCCCAAGATTATGTaGTCCTTCAGTTTCTCATGGGACACCTGTCGGCCA | + |
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Preference number: 6 (lower is better) Translates to: KFPSSFESPKIM*SFSFSWDTCRP Trigger: TGGCCGACAGGTGTCCCATGAGAAACTGAAGGATCACATAATCTTGGGAGACTCAAAGCTGCTCGGAAACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047265.13 ENSMUST00000161680.2 |
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| CDS TCA 72 bp | GCTCATGGAGGTTTGGAAGAAGTTTCCGAGCAGCTTTaGGTCTCCCAAGATTATGTGATCCTTCAGTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: AHGGLEEVSEQL*VSQDYVILQFL Trigger: GAGAAACTGAAGGATCACATAATCTTGGGAGACTCAAAGCTGCTCGGAAACTTCTTCCAAACCTCCATGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047265.13 ENSMUST00000161680.2 |
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