Pregenerated sensors for TEX44 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036574Ensembl transcript IDs: ENSMUST00000046004.6
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
CDS-3UTR CCA 90 bp | GCTTGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGTTGGGGGCCACCTGGGGAGCCTaGGTCAGGTGGATCCGGTGG | + |
Preference number: 4 (lower is better) Translates to: ACGYLLKGRGQLPSAGLGATWGA*VRWIRW Trigger: CCACCGGATCCACCTGACCCAGGCTCCCCAGGTGGC...CCCCAACCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACAAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR TCA 90 bp | GCTTGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGTTGGGGGGGCCCAGCGTGAGGTaGGATGATGGGCCAGGTAGC | + |
Preference number: 4 (lower is better) Translates to: ACGYLLKGRGQLPSAGLGGPSVR*DDGPGS Trigger: GCTACCTGGCCCATCATCTCACCTCACGCTGGGCCC...CCCCAACCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACAAGC 58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR GCA 90 bp | TGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGTTGGGGAAGGAGAGTGGGGTGGGCTaGCACCTGGGGAGCCTGGGT | + |
Preference number: 4 (lower is better) Translates to: CGYLLKGRGQLPSAGLGKESGVG*HLGSLG Trigger: ACCCAGGCTCCCCAGGTGGCAGCCCACCCCACTCTC...CTTCCCCAACCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR CCA 90 bp | GCTTGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGTTGGGGATCTGGAGAGTGGGGTaGGCTGCCACCTGGGGAGCC | + |
Preference number: 4 (lower is better) Translates to: ACGYLLKGRGQLPSAGLGIWRVG*AATWGA Trigger: GGCTCCCCAGGTGGCAGCCCACCCCACTCTCCAGAT...CCCCAACCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR GCA 90 bp | GCTTGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGTTGGGGAGCCCGAGGCCAGAATaGCCACAGCCACACCCATGC | + |
Preference number: 4 (lower is better) Translates to: ACGYLLKGRGQLPSAGLGSPRPE*PQPHPC Trigger: GCATGGGTGTGGCTGTGGGCATTCTGGCCTCGGGCT...CCCCAACCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR CCA 90 bp | ATAAACGCTTGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGGGGTGGGCTGCCACCTaGGGAGCCTGGGTCAGGTGG | + |
Preference number: 4 (lower is better) Translates to: INACGYLLKGRGQLPSAGGWAAT*GAWVRW Trigger: CCACCTGACCCAGGCTCCCCAGGTGGCAGCCCACCC...CCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACAAGCGTTTAT 57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR TCA 90 bp | TGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGTTGGGGAAGACTCCAGCAGGTGCGTaGCAGAGTGCAGGGCTGAGC | + |
Preference number: 4 (lower is better) Translates to: CGYLLKGRGQLPSAGLGKTPAGA*QSAGLS Trigger: GCTCAGCCCTGCACTCTGTCACGCACCTGCTGGAGT...CTTCCCCAACCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR GCA 90 bp | TGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGTTGGGGAAGAAGCTGACCTGGCGCTaGGCAAGAGGCTGGCGACAG | + |
Preference number: 4 (lower is better) Translates to: CGYLLKGRGQLPSAGLGKKLTWR*ARGWRQ Trigger: CTGTCGCCAGCCTCTTGCGCAGCGCCAGGTCAGCTT...CTTCCCCAACCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR TCA 90 bp | GCTTGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGTTGGGGGACAGAGTGCAGGGCTaGGCCAGTTCCAGACATCAC | + |
Preference number: 4 (lower is better) Translates to: ACGYLLKGRGQLPSAGLGDRVQG*ASSRHH Trigger: GTGATGTCTGGAACTGGCTCAGCCCTGCACTCTGTC...CCCCAACCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR GCA 90 bp | GCTTGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGTTGGGGACAGACTCCAGCAGGTaGGTGACAGAGTGCAGGGCT | + |
Preference number: 4 (lower is better) Translates to: ACGYLLKGRGQLPSAGLGTDSSR*VTECRA Trigger: AGCCCTGCACTCTGTCACGCACCTGCTGGAGTCTGT...CCCCAACCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR CCA 90 bp | GCTTGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGTTGGGGCACCTGGTAGAAATCTaGAGAGTGGGGTGGGCTGCC | + |
Preference number: 4 (lower is better) Translates to: ACGYLLKGRGQLPSAGLGHLVEI*RVGWAA Trigger: GGCAGCCCACCCCACTCTCCAGATTTCTACCAGGTG...CCCCAACCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR TCA 90 bp | GCTTGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGTTGGGGGGATTGTCCTGGCCCTaGTGTGGAATATCTGGGCTC | + |
Preference number: 4 (lower is better) Translates to: ACGYLLKGRGQLPSAGLGGLSWP*CGISGL Trigger: GAGCCCAGATATTCCACATCAGGGCCAGGACAATCC...CCCCAACCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACAAGC 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR GCA 90 bp | AACGCTTGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGTTGCCACAGCCACACCCATaGGTGTGGCTGTGTCTGACC | + |
Preference number: 4 (lower is better) Translates to: NACGYLLKGRGQLPSAGLPQPHP*VWLCLT Trigger: GGTCAGACACAGCCACACGCATGGGTGTGGCTGTGG...CAACCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACAAGCGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR CCA 90 bp | GCTTGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGTTGGGGCCTGTCCCATCAAGGTaGCAGTCTGTATGGAGGCCT | + |
Preference number: 4 (lower is better) Translates to: ACGYLLKGRGQLPSAGLGPVPSR*QSVWRP Trigger: AGGCCTCCATACAGACTGCCACCTTGATGGGACAGG...CCCCAACCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR CCA 90 bp | GCTTGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGTTGGGGGTCTTTTCCTGGGTCTaGGAGTCACTCGGGGAAACC | + |
Preference number: 4 (lower is better) Translates to: ACGYLLKGRGQLPSAGLGVFSWV*ESLGET Trigger: GGTTTCCCCGAGTGACTCCCAGACCCAGGAAAAGAC...CCCCAACCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACAAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR CCA 90 bp | GCTTGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGTTGGGGCCAGCAGGCTGGTCATaGAGCGCATGTAGTCGTTCT | + |
Preference number: 4 (lower is better) Translates to: ACGYLLKGRGQLPSAGLGPAGWS*SACSRS Trigger: AGAACGACTACATGCGCTCCATGACCAGCCTGCTGG...CCCCAACCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR CCA 90 bp | GCTTGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGTTGGGGCTTGTCCCATCAAGGTaGCAGTCTGTATGGAGGCCT | + |
Preference number: 4 (lower is better) Translates to: ACGYLLKGRGQLPSAGLGLVPSR*QSVWRP Trigger: AGGCCTCCATACAGACTGCCACCTTGATGGGACAAG...CCCCAACCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR GCA 90 bp | GCTTGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGTTGGGGGTGATGGTGGAAATCTaGTTGGAGAGCAGGTCCTCA | + |
Preference number: 4 (lower is better) Translates to: ACGYLLKGRGQLPSAGLGVMVEI*LESRSS Trigger: TGAGGACCTGCTCTCCAAGCAGATTTCCACCATCAC...CCCCAACCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACAAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR CCA 90 bp | TGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGTTGGGGAAGGTCCTGGCCCTGATGTaGAATATCTGGGCTCTCATC | + |
Preference number: 4 (lower is better) Translates to: CGYLLKGRGQLPSAGLGKVLALM*NIWALI Trigger: GATGAGAGCCCAGATATTCCACATCAGGGCCAGGAC...CTTCCCCAACCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR CCA 90 bp | TGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGTTGGGGAAGGCTCCCACCGAAGTCTaGACATGTTCAGGCAGGTTA | + |
Preference number: 4 (lower is better) Translates to: CGYLLKGRGQLPSAGLGKAPTEV*TCSGRL Trigger: TAACCTGCCTGAACATGTCCAGACTTCGGTGGGAGC...CTTCCCCAACCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR TCA 90 bp | AACGCTTGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGTTGCATTTTGCTCTGTGGTaGTGGCTTTCGCCTCAGAGG | + |
Preference number: 4 (lower is better) Translates to: NACGYLLKGRGQLPSAGLHFALW*WLSPQR Trigger: CCTCTGAGGCGAAAGCCATCACCACAGAGCAAAATG...CAACCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACAAGCGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR CCA 90 bp | GCTTGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGTTGGGGTCTGTCCCACAGAAGTaGCAATCTGCAAAGATGCCT | + |
Preference number: 4 (lower is better) Translates to: ACGYLLKGRGQLPSAGLGSVPQK*QSAKMP Trigger: AGGCATCTTTGCAGATTGCCACTTCTGTGGGACAGA...CCCCAACCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR CCA 90 bp | ATAAACGCTTGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGCACAACCCAGCAGGCTaGTCATGGAGCGCATGTAGT | + |
Preference number: 4 (lower is better) Translates to: INACGYLLKGRGQLPSAGHNPAG*SWSACS Trigger: ACTACATGCGCTCCATGACCAGCCTGCTGGGTTGTG...CCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACAAGCGTTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR TCA 90 bp | TGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGTTGGGGAAGATCTGCATGGAGGGCTaGTCTTTATTCTGTCCCACA | + |
Preference number: 4 (lower is better) Translates to: CGYLLKGRGQLPSAGLGKICMEG*SLFCPT Trigger: TGTGGGACAGAATAAAGATCAGCCCTCCATGCAGAT...CTTCCCCAACCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR TCA 90 bp | ATAAACGCTTGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGCAGGTAGCGCATAGCTaGACGGATGCCTTCCATAGT | + |
Preference number: 4 (lower is better) Translates to: INACGYLLKGRGQLPSAGQVAHS*TDAFHS Trigger: ACTATGGAAGGCATCCGTTCAGCTATGCGCTACCTG...CCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACAAGCGTTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR GCA 90 bp | GCTTGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGTTGGGGTTTGACTGCAGAAGTTaGTGTATCTGTGGAGATGGC | + |
Preference number: 4 (lower is better) Translates to: ACGYLLKGRGQLPSAGLGFDCRS*CICGDG Trigger: GCCATCTCCACAGATACAGCAACTTCTGCAGTCAAA...CCCCAACCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR GCA 90 bp | ATAAACGCTTGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGAACCCTTCAGCTTCCTaGTTGGCCGAGTTGGTGGTA | + |
Preference number: 4 (lower is better) Translates to: INACGYLLKGRGQLPSAGNPSAS*LAELVV Trigger: TACCACCAACTCGGCCAAGCAGGAAGCTGAAGGGTT...CCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACAAGCGTTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR CCA 90 bp | AACGCTTGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGTTGGGGGCAGCAAAGATGTaGTCTCTTCAGGATTGTCCT | + |
Preference number: 4 (lower is better) Translates to: NACGYLLKGRGQLPSAGLGAAKM*SLQDCP Trigger: AGGACAATCCTGAAGAGACCACATCTTTGCTGCCCC...CAACCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACAAGCGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR CCA 90 bp | ATAAACGCTTGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGAGGATACCTGGGTCTTaGGGCAGCAAAGATGTGGTC | + |
Preference number: 4 (lower is better) Translates to: INACGYLLKGRGQLPSAGRIPGS*GSKDVV Trigger: GACCACATCTTTGCTGCCCCAAGACCCAGGTATCCT...CCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACAAGCGTTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR CCA 90 bp | AACGCTTGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGTTGTCCCACACTGGGTTCTaGAAACCCACAAACACTTGC | + |
Preference number: 4 (lower is better) Translates to: NACGYLLKGRGQLPSAGLSHTGF*KPTNTC Trigger: GCAAGTGTTTGTGGGTTTCCAGAACCCAGTGTGGGA...CAACCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACAAGCGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR GCA 90 bp | ATAAACGCTTGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGGGCAATCTGCAAAGATaGCTGGTCTTCATCCTGTCC | + |
Preference number: 4 (lower is better) Translates to: INACGYLLKGRGQLPSAGGNLQR*LVFILS Trigger: GGACAGGATGAAGACCAGGCATCTTTGCAGATTGCC...CCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACAAGCGTTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR CCA 90 bp | AACGCTTGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGTTGTGGTGGAAATCTGCTTaGAGAGCAGGTCCTCATCTT | + |
Preference number: 4 (lower is better) Translates to: NACGYLLKGRGQLPSAGLWWKSA*RAGPHL Trigger: AAGATGAGGACCTGCTCTCCAAGCAGATTTCCACCA...CAACCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACAAGCGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR CCA 90 bp | TGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGTTGGGGAAGCTGATGTGGAATATCTaGGCTCTCATCTTTGACTGC | + |
Preference number: 4 (lower is better) Translates to: CGYLLKGRGQLPSAGLGKLMWNI*ALIFDC Trigger: GCAGTCAAAGATGAGAGCCCAGATATTCCACATCAG...CTTCCCCAACCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR TCA 90 bp | AACGCTTGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGTTGTCTGTCCCACAGAAGTaGCAATCTGCAAAAATGCCT | + |
Preference number: 4 (lower is better) Translates to: NACGYLLKGRGQLPSAGLSVPQK*QSAKMP Trigger: AGGCATTTTTGCAGATTGTCACTTCTGTGGGACAGA...CAACCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACAAGCGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR TCA 90 bp | ATAAACGCTTGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGGTCTGTATGGAGGCCTaGTCTTTATTCTGTCCCACA | + |
Preference number: 4 (lower is better) Translates to: INACGYLLKGRGQLPSAGVCMEA*SLFCPT Trigger: TGTGGGACAGAATAAAGATCAGGCCTCCATACAGAC...CCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACAAGCGTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR GCA 90 bp | AACGCTTGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGTTGTCCTGCTCTTCATTTTaGTCTGTGGTGATGGCTTTC | + |
Preference number: 4 (lower is better) Translates to: NACGYLLKGRGQLPSAGLSCSSF*SVVMAF Trigger: GAAAGCCATCACCACAGAGCAAAATGAAGAGCAGGA...CAACCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACAAGCGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR GCA 90 bp | GCTTGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGTTGGGGGCCTGGTCTTTATCCTaGTCAAAAACTGTGTTAATC | + |
Preference number: 4 (lower is better) Translates to: ACGYLLKGRGQLPSAGLGAWSLS*SKTVLI Trigger: GATTAACACAGTTTTTGAGCAGGATAAAGACCAGGC...CCCCAACCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR GCA 90 bp | TGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGTTGGGGAAGGACAATCTGCAAAAATaGCTGGTCTTCATCTTGTCC | + |
Preference number: 4 (lower is better) Translates to: CGYLLKGRGQLPSAGLGKDNLQK*LVFILS Trigger: GGACAAGATGAAGACCAGGCATTTTTGCAGATTGTC...CTTCCCCAACCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR GCA 90 bp | GCTTGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGTTGGGGACAGAAGTGACAATCTaGAAAAATGCCTGGTCTTCA | + |
Preference number: 4 (lower is better) Translates to: ACGYLLKGRGQLPSAGLGTEVTI*KNAWSS Trigger: TGAAGACCAGGCATTTTTGCAGATTGTCACTTCTGT...CCCCAACCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR GCA 90 bp | TGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGTTGGGGAAGAAAACTGTGTTAATCTaGATGTACGCCTGGTCTACA | + |
Preference number: 4 (lower is better) Translates to: CGYLLKGRGQLPSAGLGKKTVLI*MYAWST Trigger: TGTAGACCAGGCGTACATGCAGATTAACACAGTTTT...CTTCCCCAACCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR GCA 90 bp | ATAAACGCTTGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGACAGAAGTGGCAATCTaGAAAGATGCCTGGTCTTCA | + |
Preference number: 4 (lower is better) Translates to: INACGYLLKGRGQLPSAGTEVAI*KDAWSS Trigger: TGAAGACCAGGCATCTTTGCAGATTGCCACTTCTGT...CCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACAAGCGTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR CCA 90 bp | ATAAACGCTTGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGAGGTGTCCATCTGCATaGAGGGCTGATCTTTATTCT | + |
Preference number: 4 (lower is better) Translates to: INACGYLLKGRGQLPSAGRCPSA*RADLYS Trigger: AGAATAAAGATCAGCCCTCCATGCAGATGGACACCT...CCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACAAGCGTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR CCA 90 bp | ATAAACGCTTGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGAAGTTGCTGTATCTGTaGAGATGGCTGGCTCTACAT | + |
Preference number: 4 (lower is better) Translates to: INACGYLLKGRGQLPSAGKLLYL*RWLALH Trigger: ATGTAGAGCCAGCCATCTCCACAGATACAGCAACTT...CCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACAAGCGTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR GCA 90 bp | ATAAACGCTTGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGGCTCTCATCTTTGACTaGAGAAGTTGCTGTATCTGT | + |
Preference number: 4 (lower is better) Translates to: INACGYLLKGRGQLPSAGALIFD*RSCCIC Trigger: ACAGATACAGCAACTTCTGCAGTCAAAGATGAGAGC...CCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACAAGCGTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS CCA 90 bp | GGGCTGAGCCAGTTCCAGACATCACCCCAGAGGAGAAAGCTGACCTaGCGCTGCGCAAGAGGCTGGCGACAGTCCGCAGGCGGGGACCCT | + |
Preference number: 5 (lower is better) Translates to: GLSQFQTSPQRRKLT*RCARGWRQSAGGDP Trigger: AGGGTCCCCGCCTGCGGACTGTCGCCAGCCTCTTGCGCAGCGCCAGGTCAGCTTTCTCCTCTGGGGTGATGTCTGGAACTGGCTCAGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS GCA 90 bp | TCCTGCCCAGGGCCACCTGGTAGAAATCTGGAGAGTGGGGTGGGCTaGCACCTGGGGAGCCTGGGTCAGGTGGATCCGGTGGGATACCTG | + |
Preference number: 5 (lower is better) Translates to: SCPGPPGRNLESGVG*HLGSLGQVDPVGYL Trigger: CAGGTATCCCACCGGATCCACCTGACCCAGGCTCCCCAGGTGGCAGCCCACCCCACTCTCCAGATTTCTACCAGGTGGCCCTGGGCAGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS CCA 90 bp | ACATCACCCCAGAGGAGAAAGCTGACCTGGCGCTGCGCAAGAGGCTaGCGACAGTCCGCAGGCGGGGACCCTCGTCTTGTAGCCGGTCAG | + |
Preference number: 5 (lower is better) Translates to: TSPQRRKLTWRCARG*RQSAGGDPRLVAGQ Trigger: CTGACCGGCTACAAGACGAGGGTCCCCGCCTGCGGACTGTCGCCAGCCTCTTGCGCAGCGCCAGGTCAGCTTTCTCCTCTGGGGTGATGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS GCA 90 bp | AGCCAGTTCCAGACATCACCCCAGAGGAGAAAGCTGACCTGGCGCTaGGCAAGAGGCTGGCGACAGTCCGCAGGCGGGGACCCTCGTCTT | + |
Preference number: 5 (lower is better) Translates to: SQFQTSPQRRKLTWR*ARGWRQSAGGDPRL Trigger: AAGACGAGGGTCCCCGCCTGCGGACTGTCGCCAGCCTCTTGCGCAGCGCCAGGTCAGCTTTCTCCTCTGGGGTGATGTCTGGAACTGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS GCA 90 bp | CGTCTTGTAGCCGGTCAGCTGGAGAGCTGCAGCCCGAGGCCAGAATaGCCACAGCCACACCCATGCGTGTGGCTGTGTCTGACCACACCA | + |
Preference number: 5 (lower is better) Translates to: RLVAGQLESCSPRPE*PQPHPCVWLCLTTP Trigger: TGGTGTGGTCAGACACAGCCACACGCATGGGTGTGGCTGTGGGCATTCTGGCCTCGGGCTGCAGCTCTCCAGCTGACCGGCTACAAGACG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS TCA 90 bp | CGAGGCCAGAATGCCCACAGCCACACCCATGCGTGTGGCTGTGTCTaGCCACACCAGGATGTCTGTGAGGGAGCTGATGGAGCCCTCTCC | + |
Preference number: 5 (lower is better) Translates to: RGQNAHSHTHACGCV*PHQDVCEGADGALS Trigger: GGAGAGGGCTCCATCAGCTCCCTCACAGACATCCTGGTGTGGTCAGACACAGCCACACGCATGGGTGTGGCTGTGGGCATTCTGGCCTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS GCA 90 bp | CGTTCTCCACATCAGGTCTATACAGATTGGGGTCCAGAAGGTTCCTaGCCAGGGCCACCTGGTAGAAATCTGGAGAGTGGGGTGGGCTGC | + |
Preference number: 5 (lower is better) Translates to: RSPHQVYTDWGPEGS*PGPPGRNLESGVGC Trigger: GCAGCCCACCCCACTCTCCAGATTTCTACCAGGTGGCCCTGGGCAGGAACCTTCTGGACCCCAATCTGTATAGACCTGATGTGGAGAACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS CCA 90 bp | TGCCCTTCTGGAACATTCGGGTTTCCCAGTGTCTTTTCCTGGGTCTaGGAGTCACTCGGGGAAACCGTCCGGCTCCGACTTGTACGGTTG | + |
Preference number: 5 (lower is better) Translates to: CPSGTFGFPSVFSWV*ESLGETVRLRLVRL Trigger: CAACCGTACAAGTCGGAGCCGGACGGTTTCCCCGAGTGACTCCCAGACCCAGGAAAAGACACTGGGAAACCCGAATGTTCCAGAAGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS CCA 90 bp | ACTGGCTGCCCTTCTGGAACATTCGGGTTTCCCAGTGTCTTTTCCTaGGTCTGGGAGTCACTCGGGGAAACCGTCCGGCTCCGACTTGTA | + |
Preference number: 5 (lower is better) Translates to: TGCPSGTFGFPSVFS*VWESLGETVRLRLV Trigger: TACAAGTCGGAGCCGGACGGTTTCCCCGAGTGACTCCCAGACCCAGGAAAAGACACTGGGAAACCCGAATGTTCCAGAAGGGCAGCCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS CCA 90 bp | CCACTGGTATCGGAAGGGGGTGGGTCAGCAGCTCCCACCGAAGTCTaGACATGTTCAGGCAGGTTAGATAGCACGTCAGCATTTGGAACT | + |
Preference number: 5 (lower is better) Translates to: PLVSEGGGSAAPTEV*TCSGRLDSTSAFGT Trigger: AGTTCCAAATGCTGACGTGCTATCTAACCTGCCTGAACATGTCCAGACTTCGGTGGGAGCTGCTGACCCACCCCCTTCCGATACCAGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS CCA 90 bp | CGACTTGTACGGTTGTTTTCAGCTAGCCTGTCCCACACTGGGTTCTaGAAACCCACAAACACTTGCAGGATACCTGGGTCTTGGGGCAGC | + |
Preference number: 5 (lower is better) Translates to: RLVRLFSASLSHTGF*KPTNTCRIPGSWGS Trigger: GCTGCCCCAAGACCCAGGTATCCTGCAAGTGTTTGTGGGTTTCCAGAACCCAGTGTGGGACAGGCTAGCTGAAAACAACCGTACAAGTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS CCA 90 bp | GTCCCACACTGGGTTCTGGAAACCCACAAACACTTGCAGGATACCTaGGTCTTGGGGCAGCAAAGATGTGGTCTCTTCAGGATTGTCCTG | + |
Preference number: 5 (lower is better) Translates to: VPHWVLETHKHLQDT*VLGQQRCGLFRIVL Trigger: CAGGACAATCCTGAAGAGACCACATCTTTGCTGCCCCAAGACCCAGGTATCCTGCAAGTGTTTGTGGGTTTCCAGAACCCAGTGTGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS CCA 90 bp | TCATGGAGCGCATGTAGTCGTTCTCCACATCAGGTCTATACAGATTaGGGTCCAGAAGGTTCCTGCCCAGGGCCACCTGGTAGAAATCTG | + |
Preference number: 5 (lower is better) Translates to: SWSACSRSPHQVYTD*GPEGSCPGPPGRNL Trigger: CAGATTTCTACCAGGTGGCCCTGGGCAGGAACCTTCTGGACCCCAATCTGTATAGACCTGATGTGGAGAACGACTACATGCGCTCCATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR CAA 90 bp | ATAAACGCTTGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGCCTGGCGATCTAGCTTaGCTCCCAGGGTTCAAGGCC | + |
Preference number: 5 (lower is better) Translates to: INACGYLLKGRGQLPSAGPGDLA*LPGFKA Trigger: GGCCTTGAACCCTGGGAGCAAAGCTAGATCGCCAGG...CCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACAAGCGTTTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR CAA 90 bp | TGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGTTGGGGAAGTGCCTGGTCTTCATCTaGTCCCATCAAGGTGGCAGT | + |
Preference number: 5 (lower is better) Translates to: CGYLLKGRGQLPSAGLGKCLVFI*SHQGGS Trigger: ACTGCCACCTTGATGGGACAAGATGAAGACCAGGCA...CTTCCCCAACCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR CAA 90 bp | ATAAACGCTTGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGCCAGGGTTCAAGGCCTaGAACCCTTCAGCTTCCTGC | + |
Preference number: 5 (lower is better) Translates to: INACGYLLKGRGQLPSAGPGFKA*NPSASC Trigger: GCAGGAAGCTGAAGGGTTCAAGGCCTTGAACCCTGG...CCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACAAGCGTTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS GCA 90 bp | GCCCTGATGTGGAATATCTGGGCTCTCATCTTTGACTGCAGAAGTTaGTGTATCTGTGGAGATGGCTGGCTCTACATCTTGCCCTATGGA | + |
Preference number: 5 (lower is better) Translates to: ALMWNIWALIFDCRS*CICGDGWLYILPYG Trigger: TCCATAGGGCAAGATGTAGAGCCAGCCATCTCCACAGATACAGCAACTTCTGCAGTCAAAGATGAGAGCCCAGATATTCCACATCAGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS GCA 90 bp | TCAGGCAGGTTAGATAGCACGTCAGCATTTGGAACTAATACTGGCTaGCCTTCTGGAACATTCGGGTTTCCCAGTGTCTTTTCCTGGGTC | + |
Preference number: 5 (lower is better) Translates to: SGRLDSTSAFGTNTG*PSGTFGFPSVFSWV Trigger: GACCCAGGAAAAGACACTGGGAAACCCGAATGTTCCAGAAGGGCAGCCAGTATTAGTTCCAAATGCTGACGTGCTATCTAACCTGCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS CCA 90 bp | TGTCCATCTGCATGGAGGGCTGATCTTTATTCTGTCCCACAGAAGTaGCAATCTGCAAAGATGCCTGGTCTTCATCCTGTCCCATCAAGG | + |
Preference number: 5 (lower is better) Translates to: CPSAWRADLYSVPQK*QSAKMPGLHPVPSR Trigger: CCTTGATGGGACAGGATGAAGACCAGGCATCTTTGCAGATTGCCACTTCTGTGGGACAGAATAAAGATCAGCCCTCCATGCAGATGGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS CCA 90 bp | GGGCAGCAAAGATGTGGTCTCTTCAGGATTGTCCTGGCCCTGATGTaGAATATCTGGGCTCTCATCTTTGACTGCAGAAGTTGCTGTATC | + |
Preference number: 5 (lower is better) Translates to: GQQRCGLFRIVLALM*NIWALIFDCRSCCI Trigger: GATACAGCAACTTCTGCAGTCAAAGATGAGAGCCCAGATATTCCACATCAGGGCCAGGACAATCCTGAAGAGACCACATCTTTGCTGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR CAA 90 bp | GCTTGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGTTGGGGGTCCTGCTCTTCATTTaGCTCTGTGGTGATGGCTTT | + |
Preference number: 5 (lower is better) Translates to: ACGYLLKGRGQLPSAGLGVLLFI*LCGDGF Trigger: AAAGCCATCACCACAGAGCAAAATGAAGAGCAGGAC...CCCCAACCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACAAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS CCA 90 bp | TGGTCTTCATCTTGTCCCATCAAGGTGGCAGTCTGTATGGAGGCCTaGTCTTTATCCTGCTCAAAAACTGTGTTAATCTGCATGTACGCC | + |
Preference number: 5 (lower is better) Translates to: WSSSCPIKVAVCMEA*SLSCSKTVLICMYA Trigger: GGCGTACATGCAGATTAACACAGTTTTTGAGCAGGATAAAGACCAGGCCTCCATACAGACTGCCACCTTGATGGGACAAGATGAAGACCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS GCA 90 bp | TGTCCCATCAAGGTGGCAGTCTGTATGGAGGCCTGGTCTTTATCCTaGTCAAAAACTGTGTTAATCTGCATGTACGCCTGGTCTACATTT | + |
Preference number: 5 (lower is better) Translates to: CPIKVAVCMEAWSLS*SKTVLICMYAWSTF Trigger: AAATGTAGACCAGGCGTACATGCAGATTAACACAGTTTTTGAGCAGGATAAAGACCAGGCCTCCATACAGACTGCCACCTTGATGGGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS GCA 90 bp | GGCCTGATCTTTATTCTGTCCCACAGAAGTGACAATCTGCAAAAATaGCTGGTCTTCATCTTGTCCCATCAAGGTGGCAGTCTGTATGGA | + |
Preference number: 5 (lower is better) Translates to: GLIFILSHRSDNLQK*LVFILSHQGGSLYG Trigger: TCCATACAGACTGCCACCTTGATGGGACAAGATGAAGACCAGGCATTTTTGCAGATTGTCACTTCTGTGGGACAGAATAAAGATCAGGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS-3UTR CAA 90 bp | ATAAACGCTTGTGGTTATTTACTGAAAGGCAGGGGACAGTTACCTAGTGCAGGGTCTGGGCTCTCATCTTaGACTGCAGAAGTTGCTGTA | + |
Preference number: 5 (lower is better) Translates to: INACGYLLKGRGQLPSAGSGLSS*TAEVAV Trigger: TACAGCAACTTCTGCAGTCAAAGATGAGAGCCCAGA...CCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCACAAGCGTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS GCA 72 bp | GGGCCACCTGGTAGAAATCTGGAGAGTGGGGTGGGCTaGCACCTGGGGAGCCTGGGTCAGGTGGATCCGGTG | + |
Preference number: 6 (lower is better) Translates to: GPPGRNLESGVG*HLGSLGQVDPV Trigger: CACCGGATCCACCTGACCCAGGCTCCCCAGGTGGCAGCCCACCCCACTCTCCAGATTTCTACCAGGTGGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS CCA 72 bp | CTGGTAGAAATCTGGAGAGTGGGGTGGGCTGCCACCTaGGGAGCCTGGGTCAGGTGGATCCGGTGGGATACC | + |
Preference number: 6 (lower is better) Translates to: LVEIWRVGWAAT*GAWVRWIRWDT Trigger: GGTATCCCACCGGATCCACCTGACCCAGGCTCCCCAGGTGGCAGCCCACCCCACTCTCCAGATTTCTACCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS GCA 72 bp | TGCAGCCCGAGGCCAGAATGCCCACAGCCACACCCATaGGTGTGGCTGTGTCTGACCACACCAGGATGTCTG | + |
Preference number: 6 (lower is better) Translates to: CSPRPECPQPHP*VWLCLTTPGCL Trigger: CAGACATCCTGGTGTGGTCAGACACAGCCACACGCATGGGTGTGGCTGTGGGCATTCTGGCCTCGGGCTGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS GCA 72 bp | CTCCCAGGGTTCAAGGCCTTGAACCCTTCAGCTTCCTaGTTGGCCGAGTTGGTGGTAGGCGTGGGTTCTGGG | + |
Preference number: 6 (lower is better) Translates to: LPGFKALNPSAS*LAELVVGVGSG Trigger: CCCAGAACCCACGCCTACCACCAACTCGGCCAAGCAGGAAGCTGAAGGGTTCAAGGCCTTGAACCCTGGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS GCA 72 bp | CGTCTCTCCACAGACTCCAGCAGGTGCGTGACAGAGTaGAGGGCTGAGCCAGTTCCAGACATCACCCCAGAG | + |
Preference number: 6 (lower is better) Translates to: RLSTDSSRCVTE*RAEPVPDITPE Trigger: CTCTGGGGTGATGTCTGGAACTGGCTCAGCCCTGCACTCTGTCACGCACCTGCTGGAGTCTGTGGAGAGACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS CAA 90 bp | CCAGGGTTCAAGGCCTTGAACCCTTCAGCTTCCTGCTTGGCCGAGTaGGTGGTAGGCGTGGGTTCTGGGTCGCGACCACTGGTATCGGAA | + |
Preference number: 6 (lower is better) Translates to: PGFKALNPSASCLAE*VVGVGSGSRPLVSE Trigger: TTCCGATACCAGTGGTCGCGACCCAGAACCCACGCCTACCACCAACTCGGCCAAGCAGGAAGCTGAAGGGTTCAAGGCCTTGAACCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS TCA 72 bp | CACAGACTCCAGCAGGTGCGTGACAGAGTGCAGGGCTaGGCCAGTTCCAGACATCACCCCAGAGGAGAAAGC | + |
Preference number: 6 (lower is better) Translates to: HRLQQVRDRVQG*ASSRHHPRGES Trigger: GCTTTCTCCTCTGGGGTGATGTCTGGAACTGGCTCAGCCCTGCACTCTGTCACGCACCTGCTGGAGTCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS TCA 72 bp | AATGCCCACAGCCACACCCATGCGTGTGGCTGTGTCTaGCCACACCAGGATGTCTGTGAGGGAGCTGATGGA | + |
Preference number: 6 (lower is better) Translates to: NAHSHTHACGCV*PHQDVCEGADG Trigger: TCCATCAGCTCCCTCACAGACATCCTGGTGTGGTCAGACACAGCCACACGCATGGGTGTGGCTGTGGGCATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS CCA 72 bp | GGAACATTCGGGTTTCCCAGTGTCTTTTCCTGGGTCTaGGAGTCACTCGGGGAAACCGTCCGGCTCCGACTT | + |
Preference number: 6 (lower is better) Translates to: GTFGFPSVFSWV*ESLGETVRLRL Trigger: AAGTCGGAGCCGGACGGTTTCCCCGAGTGACTCCCAGACCCAGGAAAAGACACTGGGAAACCCGAATGTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS CCA 72 bp | CCTTCTGGAACATTCGGGTTTCCCAGTGTCTTTTCCTaGGTCTGGGAGTCACTCGGGGAAACCGTCCGGCTC | + |
Preference number: 6 (lower is better) Translates to: PSGTFGFPSVFS*VWESLGETVRL Trigger: GAGCCGGACGGTTTCCCCGAGTGACTCCCAGACCCAGGAAAAGACACTGGGAAACCCGAATGTTCCAGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS CAA 72 bp | CCTGGCGATCTAGCTTTGCTCCCAGGGTTCAAGGCCTaGAACCCTTCAGCTTCCTGCTTGGCCGAGTTGGTG | + |
Preference number: 6 (lower is better) Translates to: PGDLALLPGFKA*NPSASCLAELV Trigger: CACCAACTCGGCCAAGCAGGAAGCTGAAGGGTTCAAGGCCTTGAACCCTGGGAGCAAAGCTAGATCGCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS CAA 72 bp | GCTGAATCCTCACTGGTCAGCCCTGGCGATCTAGCTTaGCTCCCAGGGTTCAAGGCCTTGAACCCTTCAGCT | + |
Preference number: 6 (lower is better) Translates to: AESSLVSPGDLA*LPGFKALNPSA Trigger: AGCTGAAGGGTTCAAGGCCTTGAACCCTGGGAGCAAAGCTAGATCGCCAGGGCTGACCAGTGAGGATTCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS GCA 72 bp | CATCAGGTCTATACAGATTGGGGTCCAGAAGGTTCCTaGCCAGGGCCACCTGGTAGAAATCTGGAGAGTGGG | + |
Preference number: 6 (lower is better) Translates to: HQVYTDWGPEGS*PGPPGRNLESG Trigger: CCCACTCTCCAGATTTCTACCAGGTGGCCCTGGGCAGGAACCTTCTGGACCCCAATCTGTATAGACCTGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS CCA 72 bp | GCATGTAGTCGTTCTCCACATCAGGTCTATACAGATTaGGGTCCAGAAGGTTCCTGCCCAGGGCCACCTGGT | + |
Preference number: 6 (lower is better) Translates to: ACSRSPHQVYTD*GPEGSCPGPPG Trigger: ACCAGGTGGCCCTGGGCAGGAACCTTCTGGACCCCAATCTGTATAGACCTGATGTGGAGAACGACTACATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS GCA 72 bp | CTGTCCCACACTGGGTTCTGGAAACCCACAAACACTTaGAGGATACCTGGGTCTTGGGGCAGCAAAGATGTG | + |
Preference number: 6 (lower is better) Translates to: LSHTGFWKPTNT*RIPGSWGSKDV Trigger: CACATCTTTGCTGCCCCAAGACCCAGGTATCCTGCAAGTGTTTGTGGGTTTCCAGAACCCAGTGTGGGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS CCA 72 bp | CTTGCAGGATACCTGGGTCTTGGGGCAGCAAAGATGTaGTCTCTTCAGGATTGTCCTGGCCCTGATGTGGAA | + |
Preference number: 6 (lower is better) Translates to: LAGYLGLGAAKM*SLQDCPGPDVE Trigger: TTCCACATCAGGGCCAGGACAATCCTGAAGAGACCACATCTTTGCTGCCCCAAGACCCAGGTATCCTGCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS CAA 72 bp | CCTGTCCCACACTGGGTTCTGGAAACCCACAAACACTaGCAGGATACCTGGGTCTTGGGGCAGCAAAGATGT | + |
Preference number: 6 (lower is better) Translates to: PVPHWVLETHKH*QDTWVLGQQRC Trigger: ACATCTTTGCTGCCCCAAGACCCAGGTATCCTGCAAGTGTTTGTGGGTTTCCAGAACCCAGTGTGGGACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS TCA 72 bp | CCTGGCCCTGATGTGGAATATCTGGGCTCTCATCTTTaGCTGCAGAAGTTGCTGTATCTGTGGAGATGGCTG | + |
Preference number: 6 (lower is better) Translates to: PGPDVEYLGSHL*LQKLLYLWRWL Trigger: CAGCCATCTCCACAGATACAGCAACTTCTGCAGTCAAAGATGAGAGCCCAGATATTCCACATCAGGGCCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS GCA 72 bp | GCCCTGATGTGGAATATCTGGGCTCTCATCTTTGACTaGAGAAGTTGCTGTATCTGTGGAGATGGCTGGCTC | + |
Preference number: 6 (lower is better) Translates to: ALMWNIWALIFD*RSCCICGDGWL Trigger: GAGCCAGCCATCTCCACAGATACAGCAACTTCTGCAGTCAAAGATGAGAGCCCAGATATTCCACATCAGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS CCA 72 bp | TTCTGTCCCACAGAAGTGGCAATCTGCAAAGATGCCTaGTCTTCATCCTGTCCCATCAAGGTGGCAGTCTGT | + |
Preference number: 6 (lower is better) Translates to: FCPTEVAICKDA*SSSCPIKVAVC Trigger: ACAGACTGCCACCTTGATGGGACAGGATGAAGACCAGGCATCTTTGCAGATTGCCACTTCTGTGGGACAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS CAA 72 bp | CTGGAAACCCACAAACACTTGCAGGATACCTGGGTCTaGGGGCAGCAAAGATGTGGTCTCTTCAGGATTGTC | + |
Preference number: 6 (lower is better) Translates to: LETHKHLQDTWV*GQQRCGLFRIV Trigger: GACAATCCTGAAGAGACCACATCTTTGCTGCCCCAAGACCCAGGTATCCTGCAAGTGTTTGTGGGTTTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS TCA 72 bp | TCCTGTCCCATCAAGGTGGCAGTCTGTATGGAGGCCTaGTCTTTATTCTGTCCCACAGAAGTGACAATCTGC | + |
Preference number: 6 (lower is better) Translates to: SCPIKVAVCMEA*SLFCPTEVTIC Trigger: GCAGATTGTCACTTCTGTGGGACAGAATAAAGATCAGGCCTCCATACAGACTGCCACCTTGATGGGACAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS CCA 72 bp | GCAAAAATGCCTGGTCTTCATCTTGTCCCATCAAGGTaGCAGTCTGTATGGAGGCCTGGTCTTTATCCTGCT | + |
Preference number: 6 (lower is better) Translates to: AKMPGLHLVPSR*QSVWRPGLYPA Trigger: AGCAGGATAAAGACCAGGCCTCCATACAGACTGCCACCTTGATGGGACAAGATGAAGACCAGGCATTTTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS CCA 72 bp | GCATGGAGGGCTGATCTTTATTCTGTCCCACAGAAGTaGCAATCTGCAAAGATGCCTGGTCTTCATCCTGTC | + |
Preference number: 6 (lower is better) Translates to: AWRADLYSVPQK*QSAKMPGLHPV Trigger: GACAGGATGAAGACCAGGCATCTTTGCAGATTGCCACTTCTGTGGGACAGAATAAAGATCAGCCCTCCATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS CAA 90 bp | CTGTCCCACAGAAGTGACAATCTGCAAAAATGCCTGGTCTTCATCTaGTCCCATCAAGGTGGCAGTCTGTATGGAGGCCTGGTCTTTATC | + |
Preference number: 6 (lower is better) Translates to: LSHRSDNLQKCLVFI*SHQGGSLYGGLVFI Trigger: GATAAAGACCAGGCCTCCATACAGACTGCCACCTTGATGGGACAAGATGAAGACCAGGCATTTTTGCAGATTGTCACTTCTGTGGGACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS TCA 72 bp | AGCAAAGATGTGGTCTCTTCAGGATTGTCCTGGCCCTaGTGTGGAATATCTGGGCTCTCATCTTTGACTGCA | + |
Preference number: 6 (lower is better) Translates to: SKDVVSSGLSWP*CGISGLSSLTA Trigger: TGCAGTCAAAGATGAGAGCCCAGATATTCCACATCAGGGCCAGGACAATCCTGAAGAGACCACATCTTTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS CCA 72 bp | GGTCTTCATCTTGTCCCATCAAGGTGGCAGTCTGTATaGAGGCCTGGTCTTTATCCTGCTCAAAAACTGTGT | + |
Preference number: 6 (lower is better) Translates to: GLHLVPSRWQSV*RPGLYPAQKLC Trigger: ACACAGTTTTTGAGCAGGATAAAGACCAGGCCTCCATACAGACTGCCACCTTGATGGGACAAGATGAAGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS CCA 72 bp | CTCTTCAGGATTGTCCTGGCCCTGATGTGGAATATCTaGGCTCTCATCTTTGACTGCAGAAGTTGCTGTATC | + |
Preference number: 6 (lower is better) Translates to: LFRIVLALMWNI*ALIFDCRSCCI Trigger: GATACAGCAACTTCTGCAGTCAAAGATGAGAGCCCAGATATTCCACATCAGGGCCAGGACAATCCTGAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS CCA 72 bp | AGATGTGGTCTCTTCAGGATTGTCCTGGCCCTGATGTaGAATATCTGGGCTCTCATCTTTGACTGCAGAAGT | + |
Preference number: 6 (lower is better) Translates to: RCGLFRIVLALM*NIWALIFDCRS Trigger: ACTTCTGCAGTCAAAGATGAGAGCCCAGATATTCCACATCAGGGCCAGGACAATCCTGAAGAGACCACATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS CAA 72 bp | AGAAGTGACAATCTGCAAAAATGCCTGGTCTTCATCTaGTCCCATCAAGGTGGCAGTCTGTATGGAGGCCTG | + |
Preference number: 6 (lower is better) Translates to: RSDNLQKCLVFI*SHQGGSLYGGL Trigger: CAGGCCTCCATACAGACTGCCACCTTGATGGGACAAGATGAAGACCAGGCATTTTTGCAGATTGTCACTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS GCA 72 bp | TGGAATATCTGGGCTCTCATCTTTGACTGCAGAAGTTaGTGTATCTGTGGAGATGGCTGGCTCTACATCTTG | + |
Preference number: 6 (lower is better) Translates to: WNIWALIFDCRS*CICGDGWLYIL Trigger: CAAGATGTAGAGCCAGCCATCTCCACAGATACAGCAACTTCTGCAGTCAAAGATGAGAGCCCAGATATTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS CCA 72 bp | TCTTGTCCCATCAAGGTGGCAGTCTGTATGGAGGCCTaGTCTTTATCCTGCTCAAAAACTGTGTTAATCTGC | + |
Preference number: 6 (lower is better) Translates to: SCPIKVAVCMEA*SLSCSKTVLIC Trigger: GCAGATTAACACAGTTTTTGAGCAGGATAAAGACCAGGCCTCCATACAGACTGCCACCTTGATGGGACAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS CCA 72 bp | TTCTGTCCCACAGAAGTGACAATCTGCAAAAATGCCTaGTCTTCATCTTGTCCCATCAAGGTGGCAGTCTGT | + |
Preference number: 6 (lower is better) Translates to: FCPTEVTICKNA*SSSCPIKVAVC Trigger: ACAGACTGCCACCTTGATGGGACAAGATGAAGACCAGGCATTTTTGCAGATTGTCACTTCTGTGGGACAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS CAA 72 bp | TGGTCTACATTTTTCTCCGTGATGGTGGAAATCTGCTaGGAGAGCAGGTCCTCATCTTGTCTCATGAAGGTA | + |
Preference number: 6 (lower is better) Translates to: WSTFFSVMVEIC*ESRSSSCLMKV Trigger: TACCTTCATGAGACAAGATGAGGACCTGCTCTCCAAGCAGATTTCCACCATCACGGAGAAAAATGTAGACCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS TCA 72 bp | GTATGGAGGCCTGATCTTTATTCTGTCCCACAGAAGTaGCAATCTGCAAAAATGCCTGGTCTTCATCTTGTC | + |
Preference number: 6 (lower is better) Translates to: VWRPDLYSVPQK*QSAKMPGLHLV Trigger: GACAAGATGAAGACCAGGCATTTTTGCAGATTGTCACTTCTGTGGGACAGAATAAAGATCAGGCCTCCATAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS GCA 72 bp | GCCTGGTCTTTATCCTGCTCAAAAACTGTGTTAATCTaGATGTACGCCTGGTCTACATTTTTCTCCGTGATG | + |
Preference number: 6 (lower is better) Translates to: AWSLSCSKTVLI*MYAWSTFFSVM Trigger: CATCACGGAGAAAAATGTAGACCAGGCGTACATGCAGATTAACACAGTTTTTGAGCAGGATAAAGACCAGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS GCA 72 bp | TTTATTCTGTCCCACAGAAGTGACAATCTGCAAAAATaGCTGGTCTTCATCTTGTCCCATCAAGGTGGCAGT | + |
Preference number: 6 (lower is better) Translates to: FILSHRSDNLQK*LVFILSHQGGS Trigger: ACTGCCACCTTGATGGGACAAGATGAAGACCAGGCATTTTTGCAGATTGTCACTTCTGTGGGACAGAATAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |
||
CDS CCA 72 bp | TCCTGCTCAAAAACTGTGTTAATCTGCATGTACGCCTaGTCTACATTTTTCTCCGTGATGGTGGAAATCTGC | + |
Preference number: 6 (lower is better) Translates to: SCSKTVLICMYA*STFFSVMVEIC Trigger: GCAGATTTCCACCATCACGGAGAAAAATGTAGACCAGGCGTACATGCAGATTAACACAGTTTTTGAGCAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000046004.6 |