Pregenerated sensors for TEX38 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044556Ensembl transcript IDs: ENSMUST00000106521.2
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCTCACCAGGTGGCTGTGGTCTCCTTGTCAGTACCAACTCCTTGTaGTTATCTCTGTTTTCTACCAAAGGGAGCCTTTGGTACTTGCAG | + |
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Preference number: 1 (lower is better) Translates to: LSPGGCGLLVSTNSL*LSLFSTKGSLWYLQ Trigger: CTGCAAGTACCAAAGGCTCCCTTTGGTAGAAAACAGAGATAACCACAAGGAGTTGGTACTGACAAGGAGACCACAGCCACCTGGTGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106521.2 |
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| 3UTR CAA 90 bp | AACCTCTCACCAGGTGGCTGTGGTCTCCTTGTCAGTACCAACTCCTaGTGGTTATCTCTGTTTTCTACCAAAGGGAGCCTTTGGTACTTG | + |
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Preference number: 2 (lower is better) Translates to: NLSPGGCGLLVSTNS*WLSLFSTKGSLWYL Trigger: CAAGTACCAAAGGCTCCCTTTGGTAGAAAACAGAGATAACCACAAGGAGTTGGTACTGACAAGGAGACCACAGCCACCTGGTGAGAGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106521.2 |
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| CDS-3UTR CCA 90 bp | TCTCTGTTTTCTACCAAAGGGAGCCTTTGGTACTTGCAGCTCCCACCCTCACTAGATGGGAAGTGGGAATaGGGAGTCAGTCCGAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: SLFSTKGSLWYLQLPPSLDGKWE*GVSPRL Trigger: CAGCCTCGGACTGACTCCCCATTCCCACTTCCCATC...TAGTGAGGGTGGGAGCTGCAAGTACCAAAGGCTCCCTTTGGTAGAAAACAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106521.2 |
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| CDS-3UTR CCA 90 bp | GGCTGTGGTCTCCTTGTCAGTACCAACTCCTTGTGGTTATCTCTGTTTTCTACCAACATGGGAGGCAGGTaGCAGAGGGACAGGGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: GCGLLVSTNSLWLSLFSTNMGGR*QRDRAK Trigger: CTTTGCCCTGTCCCTCTGCCACCTGCCTCCCATGTT...GGTAGAAAACAGAGATAACCACAAGGAGTTGGTACTGACAAGGAGACCACAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106521.2 |
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| CDS-3UTR CCA 90 bp | TCTCTGTTTTCTACCAAAGGGAGCCTTTGGTACTTGCAGCTCCCACCCTCACTATCCTTTCAGGGCGGTTaGCCAAAGGGTAGGAGACAG | + |
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Preference number: 4 (lower is better) Translates to: SLFSTKGSLWYLQLPPSLSFQGG*PKGRRQ Trigger: CTGTCTCCTACCCTTTGGCCAACCGCCCTGAAAGGA...TAGTGAGGGTGGGAGCTGCAAGTACCAAAGGCTCCCTTTGGTAGAAAACAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106521.2 |
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| CDS-3UTR CCA 90 bp | GGTTATCTCTGTTTTCTACCAAAGGGAGCCTTTGGTACTTGCAGCTCCCACCCTTCCGTGGGCCAGTGTTaGGAGGGAACAGAAAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: GYLCFLPKGAFGTCSSHPSVGQC*EGTERN Trigger: GTTCCTTTCTGTTCCCTCCCAACACTGGCCCACGGA...AGGGTGGGAGCTGCAAGTACCAAAGGCTCCCTTTGGTAGAAAACAGAGATAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106521.2 |
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| CDS-3UTR TCA 90 bp | GGTTATCTCTGTTTTCTACCAAAGGGAGCCTTTGGTACTTGCAGCTCCCACCCTACAGTGGGCTGTAGGTaGATGTGGCAGCTCTCATCA | + |
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Preference number: 4 (lower is better) Translates to: GYLCFLPKGAFGTCSSHPTVGCR*MWQLSS Trigger: TGATGAGAGCTGCCACATTCACCTACAGCCCACTGT...AGGGTGGGAGCTGCAAGTACCAAAGGCTCCCTTTGGTAGAAAACAGAGATAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106521.2 |
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| CDS-3UTR CCA 90 bp | TCTCTGTTTTCTACCAAAGGGAGCCTTTGGTACTTGCAGCTCCCACCCTCACTACAGAGGCTTCACCTCTaGGGCTGCTGTCTTGTACAA | + |
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Preference number: 4 (lower is better) Translates to: SLFSTKGSLWYLQLPPSLQRLHL*GCCLVQ Trigger: TTGTACAAGACAGCAGCCCCAGAGGTGAAGCCTCTG...TAGTGAGGGTGGGAGCTGCAAGTACCAAAGGCTCCCTTTGGTAGAAAACAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106521.2 |
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| CDS-3UTR TCA 90 bp | GTTTTCTACCAAAGGGAGCCTTTGGTACTTGCAGCTCCCACCCTCACTAAGAGGCTCCCACAAAGAATCTaGATTCTGATCTTCCGGCTC | + |
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Preference number: 4 (lower is better) Translates to: VFYQREPLVLAAPTLTKRLPQRI*ILIFRL Trigger: GAGCCGGAAGATCAGAATTCAGATTCTTTGTGGGAG...CCTCTTAGTGAGGGTGGGAGCTGCAAGTACCAAAGGCTCCCTTTGGTAGAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106521.2 |
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| CDS-3UTR CCA 90 bp | GTGGTCTCCTTGTCAGTACCAACTCCTTGTGGTTATCTCTGTTTTCTACCAAAGCAGAGTGGTTCAACATaGGAGGCAGGTGGCAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: VVSLSVPTPCGYLCFLPKQSGST*EAGGRG Trigger: CCCTCTGCCACCTGCCTCCCATGTTGAACCACTCTG...CTTTGGTAGAAAACAGAGATAACCACAAGGAGTTGGTACTGACAAGGAGACCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106521.2 |
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| CDS-3UTR TCA 90 bp | TGGCTGTGGTCTCCTTGTCAGTACCAACTCCTTGTGGTTATCTCTGTTTTCTACGCAAAGGGCACCTCCTaGAAGATGGGAAGTGGGAAT | + |
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Preference number: 4 (lower is better) Translates to: WLWSPCQYQLLVVISVFYAKGTS*KMGSGN Trigger: ATTCCCACTTCCCATCTTTCAGGAGGTGCCCTTTGC...GTAGAAAACAGAGATAACCACAAGGAGTTGGTACTGACAAGGAGACCACAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106521.2 |
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| CDS-3UTR CCA 90 bp | TGGCTGTGGTCTCCTTGTCAGTACCAACTCCTTGTGGTTATCTCTGTTTTCTACACTTCCACCCACTGCTaGGCACGTTCTTCTCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: WLWSPCQYQLLVVISVFYTSTHC*ARSSLC Trigger: GCAAAGAGAAGAACGTGCCCAGCAGTGGGTGGAAGT...GTAGAAAACAGAGATAACCACAAGGAGTTGGTACTGACAAGGAGACCACAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106521.2 |
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| CDS-3UTR GCA 90 bp | GTTTTCTACCAAAGGGAGCCTTTGGTACTTGCAGCTCCCACCCTCACTAAGAGGAGTGCAGAAAGAGTATaGAGCTTCCTATTAGCACAG | + |
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Preference number: 4 (lower is better) Translates to: VFYQREPLVLAAPTLTKRSAERV*SFLLAQ Trigger: CTGTGCTAATAGGAAGCTGCATACTCTTTCTGCACT...CCTCTTAGTGAGGGTGGGAGCTGCAAGTACCAAAGGCTCCCTTTGGTAGAAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106521.2 |
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| CDS-3UTR TCA 90 bp | GGCTGTGGTCTCCTTGTCAGTACCAACTCCTTGTGGTTATCTCTGTTTTCTACCAAAGAATCTGAATTCTaGTCTTCCGGCTCGGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: GCGLLVSTNSLWLSLFSTKESEF*SSGSVL Trigger: CAAGACCGAGCCGGAAGATCAGAATTCAGATTCTTT...GGTAGAAAACAGAGATAACCACAAGGAGTTGGTACTGACAAGGAGACCACAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106521.2 |
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| CDS-3UTR GCA 90 bp | GGCTGTGGTCTCCTTGTCAGTACCAACTCCTTGTGGTTATCTCTGTTTTCTACCGTACAACGAAGTTCCTaGCTTCAGAGAGATCCAACT | + |
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Preference number: 4 (lower is better) Translates to: GCGLLVSTNSLWLSLFSTVQRSS*LQRDPT Trigger: AGTTGGATCTCTCTGAAGGCAGGAACTTCGTTGTAC...GGTAGAAAACAGAGATAACCACAAGGAGTTGGTACTGACAAGGAGACCACAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106521.2 |
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| CDS-3UTR GCA 90 bp | GGTTATCTCTGTTTTCTACCAAAGGGAGCCTTTGGTACTTGCAGCTCCCACCCTATCCCCAAAACATGTTaGAAGAGATCAGAGGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: GYLCFLPKGAFGTCSSHPIPKTC*KRSEAS Trigger: TGAAGCCTCTGATCTCTTGCAACATGTTTTGGGGAT...AGGGTGGGAGCTGCAAGTACCAAAGGCTCCCTTTGGTAGAAAACAGAGATAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106521.2 |
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| CDS-3UTR GCA 90 bp | TGGCTGTGGTCTCCTTGTCAGTACCAACTCCTTGTGGTTATCTCTGTTTTCTACGCACGTTCTTCTCTTTaGAAGTTCTTCTTCCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: WLWSPCQYQLLVVISVFYARSSL*KFFFQC Trigger: GCACTGGAAGAAGAACTTGCAAAGAGAAGAACGTGC...GTAGAAAACAGAGATAACCACAAGGAGTTGGTACTGACAAGGAGACCACAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106521.2 |
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| CDS-3UTR CCA 90 bp | GTGGTCTCCTTGTCAGTACCAACTCCTTGTGGTTATCTCTGTTTTCTACCAAAGGACATTTTTGAAGACTaGGGCTGCTTTGGAATCCCC | + |
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Preference number: 4 (lower is better) Translates to: VVSLSVPTPCGYLCFLPKDIFED*GCFGIP Trigger: GGGGATTCCAAAGCAGCCCCAGTCTTCAAAAATGTC...CTTTGGTAGAAAACAGAGATAACCACAAGGAGTTGGTACTGACAAGGAGACCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106521.2 |
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| CDS-3UTR CCA 90 bp | TGTGGTCTCCTTGTCAGTACCAACTCCTTGTGGTTATCTCTGTTTTCTACCAAATATCCAGTACAACAGTaGGCTGTAGGTGAATGTGGC | + |
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Preference number: 4 (lower is better) Translates to: CGLLVSTNSLWLSLFSTKYPVQQ*AVGECG Trigger: GCCACATTCACCTACAGCCCACTGTTGTACTGGATA...TTTGGTAGAAAACAGAGATAACCACAAGGAGTTGGTACTGACAAGGAGACCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106521.2 |
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| CDS-3UTR GCA 90 bp | TGTGGTCTCCTTGTCAGTACCAACTCCTTGTGGTTATCTCTGTTTTCTACCAAAAAGTTCTTCTTCCAGTaGAGAAAGAGTATGCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: CGLLVSTNSLWLSLFSTKKFFFQ*RKSMQL Trigger: AAGCTGCATACTCTTTCTGCACTGGAAGAAGAACTT...TTTGGTAGAAAACAGAGATAACCACAAGGAGTTGGTACTGACAAGGAGACCACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106521.2 |
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| CDS CCA 90 bp | TTTCAGGGCGGTTGGCCAAAGGGTAGGAGACAGAGTGGTTCAACATaGGAGGCAGGTGGCAGAGGGACAGGGCAAAGGGCACCTCCTGAA | + |
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Preference number: 5 (lower is better) Translates to: FQGGWPKGRRQSGST*EAGGRGTGQRAPPE Trigger: TTCAGGAGGTGCCCTTTGCCCTGTCCCTCTGCCACCTGCCTCCCATGTTGAACCACTCTGTCTCCTACCCTTTGGCCAACCGCCCTGAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106521.2 |
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| CDS-3UTR CAA 90 bp | GGTTATCTCTGTTTTCTACCAAAGGGAGCCTTTGGTACTTGCAGCTCCCACCCTTCTTCCGGCTCGGTCTaGGTGACAGCAGGGGGAGGG | + |
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Preference number: 5 (lower is better) Translates to: GYLCFLPKGAFGTCSSHPSSGSV*VTAGGG Trigger: CCCTCCCCCTGCTGTCACCAAGACCGAGCCGGAAGA...AGGGTGGGAGCTGCAAGTACCAAAGGCTCCCTTTGGTAGAAAACAGAGATAACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106521.2 |
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| CDS TCA 90 bp | TTCCTGCCTTCAGAGAGATCCAACTCCCACAAAGAATCTGAATTCTaGTCTTCCGGCTCGGTCTTGGTGACAGCAGGGGGAGGGCCTGTG | + |
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Preference number: 5 (lower is better) Translates to: FLPSERSNSHKESEF*SSGSVLVTAGGGPV Trigger: CACAGGCCCTCCCCCTGCTGTCACCAAGACCGAGCCGGAAGATCAGAATTCAGATTCTTTGTGGGAGTTGGATCTCTCTGAAGGCAGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106521.2 |
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| CDS-3UTR CAA 90 bp | GTTTTCTACCAAAGGGAGCCTTTGGTACTTGCAGCTCCCACCCTCACTAAGAGGTTCCGTGGGCCAGTGTaGGGAGGGAACAGAAAGGAA | + |
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Preference number: 5 (lower is better) Translates to: VFYQREPLVLAAPTLTKRFRGPV*GGNRKE Trigger: TTCCTTTCTGTTCCCTCCCAACACTGGCCCACGGAA...CCTCTTAGTGAGGGTGGGAGCTGCAAGTACCAAAGGCTCCCTTTGGTAGAAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106521.2 |
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| CDS TCA 90 bp | AACGAAGTTCCTGCCTTCAGAGAGATCCAACTCCCACAAAGAATCTaGATTCTGATCTTCCGGCTCGGTCTTGGTGACAGCAGGGGGAGG | + |
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Preference number: 5 (lower is better) Translates to: NEVPAFREIQLPQRI*ILIFRLGLGDSRGR Trigger: CCTCCCCCTGCTGTCACCAAGACCGAGCCGGAAGATCAGAATTCAGATTCTTTGTGGGAGTTGGATCTCTCTGAAGGCAGGAACTTCGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106521.2 |
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| CDS-3UTR CAA 90 bp | GTTTTCTACCAAAGGGAGCCTTTGGTACTTGCAGCTCCCACCCTCACTAAGAGGGAGGCTGTGACATTTTaGAAGACTGGGGCTGCTTTG | + |
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Preference number: 5 (lower is better) Translates to: VFYQREPLVLAAPTLTKREAVTF*KTGAAL Trigger: CAAAGCAGCCCCAGTCTTCAAAAATGTCACAGCCTC...CCTCTTAGTGAGGGTGGGAGCTGCAAGTACCAAAGGCTCCCTTTGGTAGAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106521.2 |
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| CDS CCA 90 bp | TACATTCATGCCATGGTAACGCCGCTTGTTTATCCAGTACAACAGTaGGCTGTAGGTGAATGTGGCAGCTCTCATCACTTCCACCCACTG | + |
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Preference number: 5 (lower is better) Translates to: YIHAMVTPLVYPVQQ*AVGECGSSHHFHPL Trigger: CAGTGGGTGGAAGTGATGAGAGCTGCCACATTCACCTACAGCCCACTGTTGTACTGGATAAACAAGCGGCGTTACCATGGCATGAATGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106521.2 |
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| CDS GCA 90 bp | CAGAGGCTTCACCTCTGGGGCTGCTGTCTTGTACAACGAAGTTCCTaGCTTCAGAGAGATCCAACTCCCACAAAGAATCTGAATTCTGAT | + |
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Preference number: 5 (lower is better) Translates to: QRLHLWGCCLVQRSS*LQRDPTPTKNLNSD Trigger: ATCAGAATTCAGATTCTTTGTGGGAGTTGGATCTCTCTGAAGGCAGGAACTTCGTTGTACAAGACAGCAGCCCCAGAGGTGAAGCCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106521.2 |
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| CDS-3UTR CAA 90 bp | TGTGGTCTCCTTGTCAGTACCAACTCCTTGTGGTTATCTCTGTTTTCTACCAAAGGCACGTTCTTCTCTTaGCAAGTTCTTCTTCCAGTG | + |
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Preference number: 5 (lower is better) Translates to: CGLLVSTNSLWLSLFSTKGTFFS*QVLLPV Trigger: CACTGGAAGAAGAACTTGCAAAGAGAAGAACGTGCC...TTTGGTAGAAAACAGAGATAACCACAAGGAGTTGGTACTGACAAGGAGACCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106521.2 |
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| CDS-3UTR CAA 90 bp | TGTGGTCTCCTTGTCAGTACCAACTCCTTGTGGTTATCTCTGTTTTCTACCAAAAATCCCCAAAACATGTaGCAAGAGATCAGAGGCTTC | + |
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Preference number: 5 (lower is better) Translates to: CGLLVSTNSLWLSLFSTKNPQNM*QEIRGF Trigger: GAAGCCTCTGATCTCTTGCAACATGTTTTGGGGATT...TTTGGTAGAAAACAGAGATAACCACAAGGAGTTGGTACTGACAAGGAGACCACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000106521.2 |
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| CDS-3UTR CAA 90 bp | TGTGGTCTCCTTGTCAGTACCAACTCCTTGTGGTTATCTCTGTTTTCTACCAAATCTAAAGCAAAAGGCTaGGCATTAAAGCAGTTTGTT | + |
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Preference number: 5 (lower is better) Translates to: CGLLVSTNSLWLSLFSTKSKAKG*ALKQFV Trigger: AACAAACTGCTTTAATGCCAAGCCTTTTGCTTTAGA...TTTGGTAGAAAACAGAGATAACCACAAGGAGTTGGTACTGACAAGGAGACCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106521.2 |
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| CDS TCA 72 bp | GCCGCTTGTTTATCCAGTACAACAGTGGGCTGTAGGTaGATGTGGCAGCTCTCATCACTTCCACCCACTGCT | + |
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Preference number: 6 (lower is better) Translates to: AACLSSTTVGCR*MWQLSSLPPTA Trigger: AGCAGTGGGTGGAAGTGATGAGAGCTGCCACATTCACCTACAGCCCACTGTTGTACTGGATAAACAAGCGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106521.2 |
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| CDS CCA 72 bp | GGAGGGAACAGAAAGGAACATTCCTTTCAGGGCGGTTaGCCAAAGGGTAGGAGACAGAGTGGTTCAACATGG | + |
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Preference number: 6 (lower is better) Translates to: GGNRKEHSFQGG*PKGRRQSGSTW Trigger: CCATGTTGAACCACTCTGTCTCCTACCCTTTGGCCAACCGCCCTGAAAGGAATGTTCCTTTCTGTTCCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106521.2 |
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| CDS GCA 72 bp | CACCTCTGGGGCTGCTGTCTTGTACAACGAAGTTCCTaGCTTCAGAGAGATCCAACTCCCACAAAGAATCTG | + |
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Preference number: 6 (lower is better) Translates to: HLWGCCLVQRSS*LQRDPTPTKNL Trigger: CAGATTCTTTGTGGGAGTTGGATCTCTCTGAAGGCAGGAACTTCGTTGTACAAGACAGCAGCCCCAGAGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106521.2 |
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| CDS CCA 72 bp | GCCATGGTAACGCCGCTTGTTTATCCAGTACAACAGTaGGCTGTAGGTGAATGTGGCAGCTCTCATCACTTC | + |
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Preference number: 6 (lower is better) Translates to: AMVTPLVYPVQQ*AVGECGSSHHF Trigger: GAAGTGATGAGAGCTGCCACATTCACCTACAGCCCACTGTTGTACTGGATAAACAAGCGGCGTTACCATGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106521.2 |
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| CDS CCA 72 bp | CTTGGCATTAAAGCAGTTTGTTCCGTGGGCCAGTGTTaGGAGGGAACAGAAAGGAACATTCCTTTCAGGGCG | + |
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Preference number: 6 (lower is better) Translates to: LGIKAVCSVGQC*EGTERNIPFRA Trigger: CGCCCTGAAAGGAATGTTCCTTTCTGTTCCCTCCCAACACTGGCCCACGGAACAAACTGCTTTAATGCCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106521.2 |
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| CDS CAA 72 bp | CAAGAGATCAGAGGCTTCACCTCTGGGGCTGCTGTCTaGTACAACGAAGTTCCTGCCTTCAGAGAGATCCAA | + |
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Preference number: 6 (lower is better) Translates to: QEIRGFTSGAAV*YNEVPAFREIQ Trigger: TTGGATCTCTCTGAAGGCAGGAACTTCGTTGTACAAGACAGCAGCCCCAGAGGTGAAGCCTCTGATCTCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106521.2 |
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| CDS CAA 90 bp | AACATGTTGCAAGAGATCAGAGGCTTCACCTCTGGGGCTGCTGTCTaGTACAACGAAGTTCCTGCCTTCAGAGAGATCCAACTCCCACAA | + |
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Preference number: 6 (lower is better) Translates to: NMLQEIRGFTSGAAV*YNEVPAFREIQLPQ Trigger: TTGTGGGAGTTGGATCTCTCTGAAGGCAGGAACTTCGTTGTACAAGACAGCAGCCCCAGAGGTGAAGCCTCTGATCTCTTGCAACATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106521.2 |
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| CDS CCA 72 bp | CCAAAACATGTTGCAAGAGATCAGAGGCTTCACCTCTaGGGCTGCTGTCTTGTACAACGAAGTTCCTGCCTT | + |
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Preference number: 6 (lower is better) Translates to: PKHVARDQRLHL*GCCLVQRSSCL Trigger: AAGGCAGGAACTTCGTTGTACAAGACAGCAGCCCCAGAGGTGAAGCCTCTGATCTCTTGCAACATGTTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106521.2 |
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| CDS CAA 72 bp | CATCACTTCCACCCACTGCTGGGCACGTTCTTCTCTTaGCAAGTTCTTCTTCCAGTGCAGAAAGAGTATGCA | + |
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Preference number: 6 (lower is better) Translates to: HHFHPLLGTFFS*QVLLPVQKEYA Trigger: TGCATACTCTTTCTGCACTGGAAGAAGAACTTGCAAAGAGAAGAACGTGCCCAGCAGTGGGTGGAAGTGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106521.2 |
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