Pregenerated sensors for TEX37 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051896Ensembl transcript IDs: ENSMUST00000063456.5
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGTTCAGCACATGCACCAATTTTTCCTCCTTCCTTCCCTCCGAGATaGGGCCGGGACTATGAAACAATACCCCTTCGCATAAGGAACATC | + |
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Preference number: 1 (lower is better) Translates to: SSAHAPIFPPSFPPR*GRDYETIPLRIRNI Trigger: GATGTTCCTTATGCGAAGGGGTATTGTTTCATAGTCCCGGCCTCATCTCGGAGGGAAGGAAGGAGGAAAAATTGGTGCATGTGCTGAACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063456.5 |
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| 3UTR TCA 90 bp | ACCAATTTTTCCTCCTTCCTTCCCTCCGAGATGAGGCCGGGACTATaGAACAATACCCCTTCGCATAAGGAACATCTTTCCCAGTTTATT | + |
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Preference number: 1 (lower is better) Translates to: TNFSSFLPSEMRPGL*NNTPSHKEHLSQFI Trigger: AATAAACTGGGAAAGATGTTCCTTATGCGAAGGGGTATTGTTTCATAGTCCCGGCCTCATCTCGGAGGGAAGGAAGGAGGAAAAATTGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063456.5 |
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| 3UTR-3UTR TCA 90 bp | CAATTTTTCCTCCTTCCTTCCCTCCGAGATGAGGCCGGGACTATGAAACAATACTTGGTGCTTTCTCTGTaGGCATTGGCATGGAATTCC | + |
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Preference number: 2 (lower is better) Translates to: QFFLLPSLRDEAGTMKQYLVLSL*ALAWNS Trigger: GGAATTCCATGCCAATGCTCACAGAGAAAGCACCAA...GTATTGTTTCATAGTCCCGGCCTCATCTCGGAGGGAAGGAAGGAGGAAAAATTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063456.5 |
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| 3UTR-3UTR CCA 90 bp | CAATTTTTCCTCCTTCCTTCCCTCCGAGATGAGGCCGGGACTATGAAACAATACTTTCTCTGTGAGCATTaGCATGGAATTCCTTCATAC | + |
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Preference number: 2 (lower is better) Translates to: QFFLLPSLRDEAGTMKQYFLCEH*HGIPSY Trigger: GTATGAAGGAATTCCATGCCAATGCTCACAGAGAAA...GTATTGTTTCATAGTCCCGGCCTCATCTCGGAGGGAAGGAAGGAGGAAAAATTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063456.5 |
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| 3UTR TCA 72 bp | CATGCACCAATTTTTCCTCCTTCCTTCCCTCCGAGATaGGGCCGGGACTATGAAACAATACCCCTTCGCATA | + |
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Preference number: 3 (lower is better) Translates to: HAPIFPPSFPPR*GRDYETIPLRI Trigger: TATGCGAAGGGGTATTGTTTCATAGTCCCGGCCTCATCTCGGAGGGAAGGAAGGAGGAAAAATTGGTGCATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063456.5 |
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| CDS-3UTR CCA 90 bp | GGTGCTTTCTCTGTGAGCATTGGCATGGAATTCCTTCATACGTTGAAACAGCGGCCTCCAGCTTGGGGTTaGGGTTGGGCTTGGGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: GAFSVSIGMEFLHTLKQRPPAWG*GWAWAG Trigger: ACCAGCCCAAGCCCAACCCCAACCCCAAGCTGGAGG...CCGCTGTTTCAACGTATGAAGGAATTCCATGCCAATGCTCACAGAGAAAGCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063456.5 |
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| CDS-3UTR TCA 90 bp | TTTTTCCTCCTTCCTTCCCTCCGAGATGAGGCCGGGACTATGAAACAATACCCCTCAAGATGGGGACCTTaGCTCTCTGGTGATGGTCAC | + |
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Preference number: 4 (lower is better) Translates to: FFLLPSLRDEAGTMKQYPSRWGP*LSGDGH Trigger: GTGACCATCACCAGAGAGTCAAGGTCCCCATCTTGA...GGGGTATTGTTTCATAGTCCCGGCCTCATCTCGGAGGGAAGGAAGGAGGAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000063456.5 |
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| CDS-3UTR CCA 90 bp | GGCCGGGACTATGAAACAATACCCCTTCGCATAAGGAACATCTTTCCCAGTTTAAGCCTTCCTCCAGCTTaGGGTTGGGGTTGGGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: GRDYETIPLRIRNIFPSLSLPPA*GWGWAW Trigger: CCAAGCCCAACCCCAACCCCAAGCTGGAGGAAGGCT...TAAACTGGGAAAGATGTTCCTTATGCGAAGGGGTATTGTTTCATAGTCCCGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063456.5 |
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| CDS-3UTR CCA 90 bp | TTTGGTGCTTTCTCTGTGAGCATTGGCATGGAATTCCTTCATACGTTGAAACAGGCCTTTGCCCACTTCTaGAGCAGGCTGCCGCTCCGG | + |
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Preference number: 4 (lower is better) Translates to: FGAFSVSIGMEFLHTLKQAFAHF*SRLPLR Trigger: CCGGAGCGGCAGCCTGCTCCAGAAGTGGGCAAAGGC...CTGTTTCAACGTATGAAGGAATTCCATGCCAATGCTCACAGAGAAAGCACCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063456.5 |
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| CDS-3UTR GCA 90 bp | GGTGCTTTCTCTGTGAGCATTGGCATGGAATTCCTTCATACGTTGAAACAGCGGGCGTCAAGCTTGGCCTaGTCTTGTGGCGTGACTCTA | + |
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Preference number: 4 (lower is better) Translates to: GAFSVSIGMEFLHTLKQRASSLA*SCGVTL Trigger: TAGAGTCACGCCACAAGAGCAGGCCAAGCTTGACGC...CCGCTGTTTCAACGTATGAAGGAATTCCATGCCAATGCTCACAGAGAAAGCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063456.5 |
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| CDS-3UTR TCA 90 bp | TTTTTCCTCCTTCCTTCCCTCCGAGATGAGGCCGGGACTATGAAACAATACCCCTCATGTAGGGTCTTCTaGAAGCAGGATAGCCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: FFLLPSLRDEAGTMKQYPSCRVF*KQDSLP Trigger: AGGAAGGCTATCCTGCTTTCAGAAGACCCTACATGA...GGGGTATTGTTTCATAGTCCCGGCCTCATCTCGGAGGGAAGGAAGGAGGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063456.5 |
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| CDS-3UTR CCA 90 bp | GGTGCTTTCTCTGTGAGCATTGGCATGGAATTCCTTCATACGTTGAAACAGCGGGGTTGGGGTTGGGCTTaGGCTGGTAAAACTCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: GAFSVSIGMEFLHTLKQRGWGWA*AGKTLC Trigger: GCAAAGAGTTTTACCAGCCCAAGCCCAACCCCAACC...CCGCTGTTTCAACGTATGAAGGAATTCCATGCCAATGCTCACAGAGAAAGCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000063456.5 |
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| CDS-3UTR CCA 90 bp | GGCCGGGACTATGAAACAATACCCCTTCGCATAAGGAACATCTTTCCCAGTTTAAGTTACCCGTTCTTGTaGCGGGAAGAAGCCAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: GRDYETIPLRIRNIFPSLSYPFL*REEARD Trigger: GTCCCTGGCTTCTTCCCGCCACAAGAACGGGTAACT...TAAACTGGGAAAGATGTTCCTTATGCGAAGGGGTATTGTTTCATAGTCCCGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063456.5 |
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| CDS-3UTR GCA 90 bp | GGTGCTTTCTCTGTGAGCATTGGCATGGAATTCCTTCATACGTTGAAACAGCGGGCTGGTAAAACTCTTTaGTCTGGAGCTGAGCGTCAA | + |
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Preference number: 4 (lower is better) Translates to: GAFSVSIGMEFLHTLKQRAGKTL*SGAERQ Trigger: TTGACGCTCAGCTCCAGAGCAAAGAGTTTTACCAGC...CCGCTGTTTCAACGTATGAAGGAATTCCATGCCAATGCTCACAGAGAAAGCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063456.5 |
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| CDS-3UTR GCA 90 bp | TGTGAGCATTGGCATGGAATTCCTTCATACGTTGAAACAGCGGGTATTCTCACAGTACAGCGCCAGGGATaGTGGGTAAGCATAATGGCA | + |
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Preference number: 4 (lower is better) Translates to: CEHWHGIPSYVETAGILTVQRQG*WVSIMA Trigger: TGCCATTATGCTTACCCAGCATCCCTGGCGCTGTAC...TGTGAGAATACCCGCTGTTTCAACGTATGAAGGAATTCCATGCCAATGCTCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063456.5 |
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| CDS-3UTR GCA 90 bp | TGTGAGCATTGGCATGGAATTCCTTCATACGTTGAAACAGCGGGTATTCTCACAGTAGAAGGTAGCCTTTaGCCACTTCTGGAGCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: CEHWHGIPSYVETAGILTVEGSL*PLLEQA Trigger: AGCCTGCTCCAGAAGTGGGCAAAGGCTACCTTCTAC...TGTGAGAATACCCGCTGTTTCAACGTATGAAGGAATTCCATGCCAATGCTCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063456.5 |
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| CDS-3UTR CCA 90 bp | TTTGGTGCTTTCTCTGTGAGCATTGGCATGGAATTCCTTCATACGTTGAAACAGTCCACGTGGTTCTTTTaGGGTCTCACCACACGTGCC | + |
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Preference number: 4 (lower is better) Translates to: FGAFSVSIGMEFLHTLKQSTWFF*GLTTRA Trigger: GGCACGTGTGGTGAGACCCCAAAAGAACCACGTGGA...CTGTTTCAACGTATGAAGGAATTCCATGCCAATGCTCACAGAGAAAGCACCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063456.5 |
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| CDS CCA 90 bp | TTTGCCCACTTCTGGAGCAGGCTGCCGCTCCGGTTCCATGAGGCATaGGAAGTCGGCCCTCTGGTGAAGCCAGTAGGGGTCTTGCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: FAHFWSRLPLRFHEA*EVGPLVKPVGVLLG Trigger: GCCCAGCAAGACCCCTACTGGCTTCACCAGAGGGCCGACTTCCCATGCCTCATGGAACCGGAGCGGCAGCCTGCTCCAGAAGTGGGCAAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063456.5 |
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| CDS TCA 90 bp | GGTAGCCTTTGCCCACTTCTGGAGCAGGCTGCCGCTCCGGTTCCATaGGGCATGGGAAGTCGGCCCTCTGGTGAAGCCAGTAGGGGTCTT | + |
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Preference number: 5 (lower is better) Translates to: GSLCPLLEQAAAPVP*GMGSRPSGEASRGL Trigger: AAGACCCCTACTGGCTTCACCAGAGGGCCGACTTCCCATGCCTCATGGAACCGGAGCGGCAGCCTGCTCCAGAAGTGGGCAAAGGCTACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063456.5 |
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| CDS GCA 90 bp | GTGAAGCCAGTAGGGGTCTTGCTGGGCCAGGTACAGCGCCAGGGATaGTGGGTAAGCATAATGGCAGGTGGTGGTAAACCTGCCGTCATC | + |
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Preference number: 5 (lower is better) Translates to: VKPVGVLLGQVQRQG*WVSIMAGGGKPAVI Trigger: GATGACGGCAGGTTTACCACCACCTGCCATTATGCTTACCCAGCATCCCTGGCGCTGTACCTGGCCCAGCAAGACCCCTACTGGCTTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063456.5 |
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| CDS CCA 90 bp | AAGCCAGTAGGGGTCTTGCTGGGCCAGGTACAGCGCCAGGGATGCTaGGTAAGCATAATGGCAGGTGGTGGTAAACCTGCCGTCATCCTT | + |
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Preference number: 5 (lower is better) Translates to: KPVGVLLGQVQRQGC*VSIMAGGGKPAVIL Trigger: AAGGATGACGGCAGGTTTACCACCACCTGCCATTATGCTTACCCAGCATCCCTGGCGCTGTACCTGGCCCAGCAAGACCCCTACTGGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063456.5 |
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| CDS TCA 90 bp | AGAAGCCAGGGACTCCCAAGTCTAGGGCAGTCATGTAGGGTCTTCTaGAAGCAGGATAGCCTTCCTCCAGCTTGGGGTTGGGGTTGGGCT | + |
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Preference number: 5 (lower is better) Translates to: RSQGLPSLGQSCRVF*KQDSLPPAWGWGWA Trigger: AGCCCAACCCCAACCCCAAGCTGGAGGAAGGCTATCCTGCTTTCAGAAGACCCTACATGACTGCCCTAGACTTGGGAGTCCCTGGCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063456.5 |
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| CDS-3UTR CAA 90 bp | GGCCGGGACTATGAAACAATACCCCTTCGCATAAGGAACATCTTTCCCAGTTTAAAGCTTGGCCTGCTCTaGTGGCGTGACTCTAGAATA | + |
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Preference number: 5 (lower is better) Translates to: GRDYETIPLRIRNIFPSLKLGLL*WRDSRI Trigger: TATTCTAGAGTCACGCCACAAGAGCAGGCCAAGCTT...TAAACTGGGAAAGATGTTCCTTATGCGAAGGGGTATTGTTTCATAGTCCCGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063456.5 |
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| CDS-3UTR CAA 90 bp | CGGGACTATGAAACAATACCCCTTCGCATAAGGAACATCTTTCCCAGTTTATTTGTGACTCTAGAATATTaGTACTTCCCAAAGGGCTTA | + |
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Preference number: 5 (lower is better) Translates to: RDYETIPLRIRNIFPSLFVTLEY*YFPKGL Trigger: TAAGCCCTTTGGGAAGTACAAATATTCTAGAGTCAC...AAATAAACTGGGAAAGATGTTCCTTATGCGAAGGGGTATTGTTTCATAGTCCCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063456.5 |
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| CDS CAA 72 bp | TGGGAAGTCGGCCCTCTGGTGAAGCCAGTAGGGGTCTaGCTGGGCCAGGTACAGCGCCAGGGATGCTGGGTA | + |
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Preference number: 6 (lower is better) Translates to: WEVGPLVKPVGV*LGQVQRQGCWV Trigger: TACCCAGCATCCCTGGCGCTGTACCTGGCCCAGCAAGACCCCTACTGGCTTCACCAGAGGGCCGACTTCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063456.5 |
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| CDS CCA 72 bp | GGGGTCTTGCTGGGCCAGGTACAGCGCCAGGGATGCTaGGTAAGCATAATGGCAGGTGGTGGTAAACCTGCC | + |
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Preference number: 6 (lower is better) Translates to: GVLLGQVQRQGC*VSIMAGGGKPA Trigger: GGCAGGTTTACCACCACCTGCCATTATGCTTACCCAGCATCCCTGGCGCTGTACCTGGCCCAGCAAGACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063456.5 |
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| CDS CAA 90 bp | CATGAGGCATGGGAAGTCGGCCCTCTGGTGAAGCCAGTAGGGGTCTaGCTGGGCCAGGTACAGCGCCAGGGATGCTGGGTAAGCATAATG | + |
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Preference number: 6 (lower is better) Translates to: HEAWEVGPLVKPVGV*LGQVQRQGCWVSIM Trigger: CATTATGCTTACCCAGCATCCCTGGCGCTGTACCTGGCCCAGCAAGACCCCTACTGGCTTCACCAGAGGGCCGACTTCCCATGCCTCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063456.5 |
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| CDS TCA 72 bp | GGACTCCCAAGTCTAGGGCAGTCATGTAGGGTCTTCTaGAAGCAGGATAGCCTTCCTCCAGCTTGGGGTTGG | + |
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Preference number: 6 (lower is better) Translates to: GLPSLGQSCRVF*KQDSLPPAWGW Trigger: CCAACCCCAAGCTGGAGGAAGGCTATCCTGCTTTCAGAAGACCCTACATGACTGCCCTAGACTTGGGAGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063456.5 |
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| CDS CAA 72 bp | TTTGCTCTGGAGCTGAGCGTCAAGCTTGGCCTGCTCTaGTGGCGTGACTCTAGAATATTTGTACTTCCCAAA | + |
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Preference number: 6 (lower is better) Translates to: FALELSVKLGLL*WRDSRIFVLPK Trigger: TTTGGGAAGTACAAATATTCTAGAGTCACGCCACAAGAGCAGGCCAAGCTTGACGCTCAGCTCCAGAGCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063456.5 |
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| CDS CAA 90 bp | GTAAAACTCTTTGCTCTGGAGCTGAGCGTCAAGCTTGGCCTGCTCTaGTGGCGTGACTCTAGAATATTTGTACTTCCCAAAGGGCTTATA | + |
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Preference number: 6 (lower is better) Translates to: VKLFALELSVKLGLL*WRDSRIFVLPKGLI Trigger: TATAAGCCCTTTGGGAAGTACAAATATTCTAGAGTCACGCCACAAGAGCAGGCCAAGCTTGACGCTCAGCTCCAGAGCAAAGAGTTTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063456.5 |
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