Pregenerated sensors for TEX36 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030976Ensembl transcript IDs: ENSMUST00000033275.4
Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS CCA 90 bp | GTATGGGCAGTGGGTTTCCTTCAGGGAAGTACACGTGATGGATTCTaGTGTCTTCTCCGTCAGACCAGTGTGAGTGAACCATCTTCCGTC | + |
Preference number: 5 (lower is better) Translates to: VWAVGFLQGSTRDGF*CLLRQTSVSEPSSV Trigger: GACGGAAGATGGTTCACTCACACTGGTCTGACGGAGAAGACACCAGAATCCATCACGTGTACTTCCCTGAAGGAAACCCACTGCCCATAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033275.4 |
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CDS CCA 90 bp | AGGGAAGTTTTTGTTTGCTGCTTGCTTCTCTCGAATTTTGTAGATTaGTGGCAGCCTCCTCTCCACCTGCTCAGACAAGTATGGGCAGTG | + |
Preference number: 5 (lower is better) Translates to: REVFVCCLLLSNFVD*WQPPLHLLRQVWAV Trigger: CACTGCCCATACTTGTCTGAGCAGGTGGAGAGGAGGCTGCCACCAATCTACAAAATTCGAGAGAAGCAAGCAGCAAACAAAAACTTCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033275.4 |
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CDS TCA 90 bp | GAAGTACACGTGATGGATTCTGGTGTCTTCTCCGTCAGACCAGTGTaGGTGAACCATCTTCCGTCATTATTCAAAGACGGGTTGAAACGC | + |
Preference number: 5 (lower is better) Translates to: EVHVMDSGVFSVRPV*VNHLPSLFKDGLKR Trigger: GCGTTTCAACCCGTCTTTGAATAATGACGGAAGATGGTTCACTCACACTGGTCTGACGGAGAAGACACCAGAATCCATCACGTGTACTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033275.4 |
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CDS CCA 72 bp | AGAGCCTCTGGAAGGTTTAGGGATCCTGCACAAGCCTaGGGAGAGACAACCTTTGGGTCAACAGCAAGCTCT | + |
Preference number: 6 (lower is better) Translates to: RASGRFRDPAQA*GETTFGSTASS Trigger: AGAGCTTGCTGTTGACCCAAAGGTTGTCTCTCCCCAGGCTTGTGCAGGATCCCTAAACCTTCCAGAGGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033275.4 |
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CDS CCA 72 bp | AGCCTCCTCTCCACCTGCTCAGACAAGTATGGGCAGTaGGTTTCCTTCAGGGAAGTACACGTGATGGATTCT | + |
Preference number: 6 (lower is better) Translates to: SLLSTCSDKYGQ*VSFREVHVMDS Trigger: AGAATCCATCACGTGTACTTCCCTGAAGGAAACCCACTGCCCATACTTGTCTGAGCAGGTGGAGAGGAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033275.4 |
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CDS CCA 72 bp | GTGGGTTTCCTTCAGGGAAGTACACGTGATGGATTCTaGTGTCTTCTCCGTCAGACCAGTGTGAGTGAACCA | + |
Preference number: 6 (lower is better) Translates to: VGFLQGSTRDGF*CLLRQTSVSEP Trigger: TGGTTCACTCACACTGGTCTGACGGAGAAGACACCAGAATCCATCACGTGTACTTCCCTGAAGGAAACCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033275.4 |
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CDS CCA 72 bp | GTTTGCTGCTTGCTTCTCTCGAATTTTGTAGATTGGTaGCAGCCTCCTCTCCACCTGCTCAGACAAGTATGG | + |
Preference number: 6 (lower is better) Translates to: VCCLLLSNFVDW*QPPLHLLRQVW Trigger: CCATACTTGTCTGAGCAGGTGGAGAGGAGGCTGCCACCAATCTACAAAATTCGAGAGAAGCAAGCAGCAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033275.4 |
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CDS CAA 72 bp | GTCATGCACAGAGAAAGGGAAGTTTTTGTTTGCTGCTaGCTTCTCTCGAATTTTGTAGATTGGTGGCAGCCT | + |
Preference number: 6 (lower is better) Translates to: VMHREREVFVCC*LLSNFVDWWQP Trigger: AGGCTGCCACCAATCTACAAAATTCGAGAGAAGCAAGCAGCAAACAAAAACTTCCCTTTCTCTGTGCATGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033275.4 |
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CDS CCA 72 bp | GAGATTGAAATTTCTAGAAATGTGTTGCTTTTGATCTaGGGTGAACTTCTTGCGCCCCAAGCCAGAGTCAAA | + |
Preference number: 6 (lower is better) Translates to: EIEISRNVLLLI*GELLAPQARVK Trigger: TTTGACTCTGGCTTGGGGCGCAAGAAGTTCACCCCAGATCAAAAGCAACACATTTCTAGAAATTTCAATCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033275.4 |
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CDS CAA 72 bp | TCCATTTGGCTGGTATCCCAAAAACTTTGCACAGTTTaGGTTGTAAGCAAACTTGTAGTCACTCCATTTCTC | + |
Preference number: 6 (lower is better) Translates to: SIWLVSQKLCTV*VVSKLVVTPFL Trigger: GAGAAATGGAGTGACTACAAGTTTGCTTACAACCAAAACTGTGCAAAGTTTTTGGGATACCAGCCAAATGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033275.4 |
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CDS CAA 90 bp | AGCAAGCTCTCCATTTGGCTGGTATCCCAAAAACTTTGCACAGTTTaGGTTGTAAGCAAACTTGTAGTCACTCCATTTCTCATCATAATA | + |
Preference number: 6 (lower is better) Translates to: SKLSIWLVSQKLCTV*VVSKLVVTPFLIII Trigger: TATTATGATGAGAAATGGAGTGACTACAAGTTTGCTTACAACCAAAACTGTGCAAAGTTTTTGGGATACCAGCCAAATGGAGAGCTTGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033275.4 |
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CDS TCA 72 bp | CACAGCTTTCTTAGGTACGTAGGATGTTTGGTTATTTaGAAGACCATCAAAATTGGATGGGATGTAGTCACA | + |
Preference number: 6 (lower is better) Translates to: HSFLRYVGCLVI*KTIKIGWDVVT Trigger: TGTGACTACATCCCATCCAATTTTGATGGTCTTTCAAATAACCAAACATCCTACGTACCTAAGAAAGCTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033275.4 |
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CDS CAA 72 bp | CAAACTTGTAGTCACTCCATTTCTCATCATAATATCTaGGAAATCGTCGGAAAGTTGAGATCACCACAGCTT | + |
Preference number: 6 (lower is better) Translates to: QTCSHSISHHNI*EIVGKLRSPQL Trigger: AAGCTGTGGTGATCTCAACTTTCCGACGATTTCCAAGATATTATGATGAGAAATGGAGTGACTACAAGTTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033275.4 |