Pregenerated sensors for TEX35 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026592Ensembl transcript IDs: ENSMUST00000027884.13, ENSMUST00000118207.8, ENSMUST00000119526.2, ENSMUST00000121911.8, ENSMUST00000148649.3, ENSMUST00000187546.7
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGACATGGATGGAGGGACTCCAGTGGATTCCTCGTTGGTTTTGGTaGCACCACATTCTTGTCACAAGCCAATGGTGCTCCATCGGGTTC | + |
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Preference number: 1 (lower is better) Translates to: LTWMEGLQWIPRWFW*HHILVTSQWCSIGF Trigger: GAACCCGATGGAGCACCATTGGCTTGTGACAAGAATGTGGTGCCACCAAAACCAACGAGGAATCCACTGGAGTCCCTCCATCCATGTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148649.3 |
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| 3UTR CCA 90 bp | ACTCTGACATGGATGGAGGGACTCCAGTGGATTCCTCGTTGGTTTTaGTGGCACCACATTCTTGTCACAAGCCAATGGTGCTCCATCGGG | + |
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Preference number: 1 (lower is better) Translates to: TLTWMEGLQWIPRWF*WHHILVTSQWCSIG Trigger: CCCGATGGAGCACCATTGGCTTGTGACAAGAATGTGGTGCCACCAAAACCAACGAGGAATCCACTGGAGTCCCTCCATCCATGTCAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148649.3 |
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| 3UTR TCA 90 bp | CCACATTCTTGTCACAAGCCAATGGTGCTCCATCGGGTTCTTCTGTaGTCATGGCTTGGGAGCCTTTGTCCATCTTTCCTAGCTGCCAGA | + |
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Preference number: 1 (lower is better) Translates to: PHSCHKPMVLHRVLL*SWLGSLCPSFLAAR Trigger: TCTGGCAGCTAGGAAAGATGGACAAAGGCTCCCAAGCCATGATCACAGAAGAACCCGATGGAGCACCATTGGCTTGTGACAAGAATGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148649.3 |
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| 3UTR TCA 90 bp | CGGTTGGTCTTTAGGGCACACAACAAACATTTCTCGCAGCAACTCTaGCATGGATGGAGGGACTCCAGTGGATTCCTCGTTGGTTTTGGT | + |
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Preference number: 1 (lower is better) Translates to: RLVFRAHNKHFSQQL*HGWRDSSGFLVGFG Trigger: ACCAAAACCAACGAGGAATCCACTGGAGTCCCTCCATCCATGTCAGAGTTGCTGCGAGAAATGTTTGTTGTGTGCCCTAAAGACCAACCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148649.3 |
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| 3UTR CCA 90 bp | CAAACATTTCTCGCAGCAACTCTGACATGGATGGAGGGACTCCAGTaGATTCCTCGTTGGTTTTGGTGGCACCACATTCTTGTCACAAGC | + |
|
Preference number: 1 (lower is better) Translates to: QTFLAATLTWMEGLQ*IPRWFWWHHILVTS Trigger: GCTTGTGACAAGAATGTGGTGCCACCAAAACCAACGAGGAATCCACTGGAGTCCCTCCATCCATGTCAGAGTTGCTGCGAGAAATGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148649.3 |
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| 3UTR-3UTR TCA 90 bp | GCACCCAGGCATGGTGTGAAGGTCTCCTGCCCTGATTGCGGTTGGTCTTTAGGGGTTCTCTCACCTCCCTaGGTTCGTTCTTCAGCTCCC | + |
|
Preference number: 2 (lower is better) Translates to: APRHGVKVSCPDCGWSLGVLSPP*VRSSAP Trigger: GGGAGCTGAAGAACGAACTCAGGGAGGTGAGAGAAC...CCCTAAAGACCAACCGCAATCAGGGCAGGAGACCTTCACACCATGCCTGGGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148649.3 |
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| 3UTR CAA 90 bp | AACTCTGACATGGATGGAGGGACTCCAGTGGATTCCTCGTTGGTTTaGGTGGCACCACATTCTTGTCACAAGCCAATGGTGCTCCATCGG | + |
|
Preference number: 2 (lower is better) Translates to: NSDMDGGTPVDSSLV*VAPHSCHKPMVLHR Trigger: CCGATGGAGCACCATTGGCTTGTGACAAGAATGTGGTGCCACCAAAACCAACGAGGAATCCACTGGAGTCCCTCCATCCATGTCAGAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148649.3 |
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| 3UTR CAA 90 bp | AGGGACTCCAGTGGATTCCTCGTTGGTTTTGGTGGCACCACATTCTaGTCACAAGCCAATGGTGCTCCATCGGGTTCTTCTGTGATCATG | + |
|
Preference number: 2 (lower is better) Translates to: RDSSGFLVGFGGTTF*SQANGAPSGSSVIM Trigger: CATGATCACAGAAGAACCCGATGGAGCACCATTGGCTTGTGACAAGAATGTGGTGCCACCAAAACCAACGAGGAATCCACTGGAGTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148649.3 |
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| 3UTR-3UTR GCA 90 bp | GGAGGGACTCCAGTGGATTCCTCGTTGGTTTTGGTGGCACCACATTCTTGTCACAGCTGCCAGAATTTCTaGTGCTCCTTGGCTTGGTTT | + |
|
Preference number: 2 (lower is better) Translates to: GGTPVDSSLVLVAPHSCHSCQNF*CSLAWF Trigger: AAACCAAGCCAAGGAGCAGCAGAAATTCTGGCAGCT...GTGACAAGAATGTGGTGCCACCAAAACCAACGAGGAATCCACTGGAGTCCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148649.3 |
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| 3UTR-3UTR GCA 90 bp | AGAAAGCAGCTCCAGACGACAAGGGTGAAAAAGGCACCCAGGCATGGTGTGAAGTCCATCTTTCCTAGCTaGCAGAATTTCTGCTGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: RKQLQTTRVKKAPRHGVKSIFPS*QNFCCS Trigger: GGAGCAGCAGAAATTCTGGCAGCTAGGAAAGATGGA...CTTCACACCATGCCTGGGTGCCTTTTTCACCCTTGTCGTCTGGAGCTGCTTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148649.3 |
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| 3UTR-3UTR TCA 90 bp | GTTTTGGTGGCACCACATTCTTGTCACAAGCCAATGGTGCTCCATCGGGTTCTTTCCTTGGCTTGGTTTTaGAAGGGAAGCTTGTTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: VLVAPHSCHKPMVLHRVLSLAWF*KGSLLF Trigger: GAACAACAAGCTTCCCTTTCAAAACCAAGCCAAGGA...AAGAACCCGATGGAGCACCATTGGCTTGTGACAAGAATGTGGTGCCACCAAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148649.3 |
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| 3UTR-3UTR GCA 90 bp | GGAGGGACTCCAGTGGATTCCTCGTTGGTTTTGGTGGCACCACATTCTTGTCACTCGTCCATATCCTGCTaGATTTCCTTCATAATTTCC | + |
|
Preference number: 2 (lower is better) Translates to: GGTPVDSSLVLVAPHSCHSSISC*ISFIIS Trigger: GGAAATTATGAAGGAAATGCAGCAGGATATGGACGA...GTGACAAGAATGTGGTGCCACCAAAACCAACGAGGAATCCACTGGAGTCCCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148649.3 |
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| 3UTR GCA 72 bp | GTGAAAAAGGCACCCAGGCATGGTGTGAAGGTCTCCTaGCCTGATTGCGGTTGGTCTTTAGGGCACACAACA | + |
|
Preference number: 3 (lower is better) Translates to: VKKAPRHGVKVS*PDCGWSLGHTT Trigger: TGTTGTGTGCCCTAAAGACCAACCGCAATCAGGGCAGGAGACCTTCACACCATGCCTGGGTGCCTTTTTCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148649.3 |
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| 3UTR-3UTR CAA 90 bp | AGAAAGCAGCTCCAGACGACAAGGGTGAAAAAGGCACCCAGGCATGGTGTGAAGATGGCTTGGGAGCCTTaGTCCATCTTTCCTAGCTGC | + |
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Preference number: 3 (lower is better) Translates to: RKQLQTTRVKKAPRHGVKMAWEP*SIFPSC Trigger: GCAGCTAGGAAAGATGGACAAAGGCTCCCAAGCCAT...CTTCACACCATGCCTGGGTGCCTTTTTCACCCTTGTCGTCTGGAGCTGCTTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148649.3 |
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| 3UTR CCA 72 bp | ATGGAGGGACTCCAGTGGATTCCTCGTTGGTTTTGGTaGCACCACATTCTTGTCACAAGCCAATGGTGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: MEGLQWIPRWFW*HHILVTSQWCS Trigger: GGAGCACCATTGGCTTGTGACAAGAATGTGGTGCCACCAAAACCAACGAGGAATCCACTGGAGTCCCTCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148649.3 |
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| 3UTR CCA 72 bp | CTCGCAGCAACTCTGACATGGATGGAGGGACTCCAGTaGATTCCTCGTTGGTTTTGGTGGCACCACATTCTT | + |
|
Preference number: 3 (lower is better) Translates to: LAATLTWMEGLQ*IPRWFWWHHIL Trigger: AAGAATGTGGTGCCACCAAAACCAACGAGGAATCCACTGGAGTCCCTCCATCCATGTCAGAGTTGCTGCGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148649.3 |
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| 3UTR CCA 72 bp | AGGCATGGTGTGAAGGTCTCCTGCCCTGATTGCGGTTaGTCTTTAGGGCACACAACAAACATTTCTCGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: RHGVKVSCPDCG*SLGHTTNISRS Trigger: GCTGCGAGAAATGTTTGTTGTGTGCCCTAAAGACCAACCGCAATCAGGGCAGGAGACCTTCACACCATGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148649.3 |
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| 3UTR CCA 72 bp | CTGACATGGATGGAGGGACTCCAGTGGATTCCTCGTTaGTTTTGGTGGCACCACATTCTTGTCACAAGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: LTWMEGLQWIPR*FWWHHILVTSQ Trigger: TTGGCTTGTGACAAGAATGTGGTGCCACCAAAACCAACGAGGAATCCACTGGAGTCCCTCCATCCATGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148649.3 |
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| 3UTR CCA 72 bp | AATGGTGCTCCATCGGGTTCTTCTGTGATCATGGCTTaGGAGCCTTTGTCCATCTTTCCTAGCTGCCAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: NGAPSGSSVIMA*EPLSIFPSCQN Trigger: ATTCTGGCAGCTAGGAAAGATGGACAAAGGCTCCCAAGCCATGATCACAGAAGAACCCGATGGAGCACCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148649.3 |
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| 3UTR CCA 72 bp | TGGTTTTGGTGGCACCACATTCTTGTCACAAGCCAATaGTGCTCCATCGGGTTCTTCTGTGATCATGGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: WFWWHHILVTSQ*CSIGFFCDHGL Trigger: CAAGCCATGATCACAGAAGAACCCGATGGAGCACCATTGGCTTGTGACAAGAATGTGGTGCCACCAAAACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148649.3 |
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| 3UTR CCA 72 bp | GGCACACAACAAACATTTCTCGCAGCAACTCTGACATaGATGGAGGGACTCCAGTGGATTCCTCGTTGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: GTQQTFLAATLT*MEGLQWIPRWF Trigger: AAACCAACGAGGAATCCACTGGAGTCCCTCCATCCATGTCAGAGTTGCTGCGAGAAATGTTTGTTGTGTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148649.3 |
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| 3UTR TCA 72 bp | TTTAGGGCACACAACAAACATTTCTCGCAGCAACTCTaGCATGGATGGAGGGACTCCAGTGGATTCCTCGTT | + |
|
Preference number: 3 (lower is better) Translates to: FRAHNKHFSQQL*HGWRDSSGFLV Trigger: AACGAGGAATCCACTGGAGTCCCTCCATCCATGTCAGAGTTGCTGCGAGAAATGTTTGTTGTGTGCCCTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148649.3 |
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| CDS-3UTR GCA 90 bp | GCTGGTGGTAGGCTCCATGGCTGTGCTAGGTCGGCAGCACATGCTCCACCTCGGGTCTCCTGCCCTGATTaGGGTTGGTCTTTAGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: AGGRLHGCARSAAHAPPRVSCPD*GWSLGH Trigger: GTGCCCTAAAGACCAACCGCAATCAGGGCAGGAGAC...CCGAGGTGGAGCATGTGCTGCCGACCTAGCACAGCCATGGAGCCTACCACCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118207.8 ENSMUST00000121911.8 |
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| CDS-3UTR TCA 90 bp | GTAGGCTCCATGGCTGTGCTAGGTCGGCAGCACATGCTCCACCTCGGCGAAGTTGTTCTCTCACCTCCCTaGGTTCGTTCTTCAGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: VGSMAVLGRQHMLHLGEVVLSPP*VRSSAP Trigger: GGGAGCTGAAGAACGAACTCAGGGAGGTGAGAGAAC...AACTTCGCCGAGGTGGAGCATGTGCTGCCGACCTAGCACAGCCATGGAGCCTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027884.13 ENSMUST00000118207.8 ENSMUST00000121911.8 |
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| CDS-3UTR GCA 90 bp | AGGGTGAAAAAGGCACCCAGGCATGGTGTGAAGGTCTCCTGCCCTGATTGCGGTGGCCCCACCGTGCCCTaGAACACTCTTCCTTTACCA | + |
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Preference number: 4 (lower is better) Translates to: RVKKAPRHGVKVSCPDCGGPTVP*NTLPLP Trigger: TGGTAAAGGAAGAGTGTTGCAGGGCACGGTGGGGCC...ACCGCAATCAGGGCAGGAGACCTTCACACCATGCCTGGGTGCCTTTTTCACCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148649.3 |
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| CDS-3UTR CCA 90 bp | GCTGGTGGTAGGCTCCATGGCTGTGCTAGGTCGGCAGCACATGCTCCACCTCGGCAGTGGATTCCTCGTTaGTTTTGGTGGCACCACATT | + |
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Preference number: 4 (lower is better) Translates to: AGGRLHGCARSAAHAPPRQWIPR*FWWHHI Trigger: AATGTGGTGCCACCAAAACCAACGAGGAATCCACTG...CCGAGGTGGAGCATGTGCTGCCGACCTAGCACAGCCATGGAGCCTACCACCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027884.13 ENSMUST00000118207.8 ENSMUST00000121911.8 |
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| CDS-3UTR CCA 90 bp | GTGGTAGGCTCCATGGCTGTGCTAGGTCGGCAGCACATGCTCCACCTCGGCGAATCCCCTGATTGCGGTTaGTCTTTAGGGCACACAACA | + |
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Preference number: 4 (lower is better) Translates to: VVGSMAVLGRQHMLHLGESPDCG*SLGHTT Trigger: TGTTGTGTGCCCTAAAGACCAACCGCAATCAGGGGA...TTCGCCGAGGTGGAGCATGTGCTGCCGACCTAGCACAGCCATGGAGCCTACCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027884.13 |
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| CDS-3UTR CCA 90 bp | GTGGTAGGCTCCATGGCTGTGCTAGGTCGGCAGCACATGCTCCACCTCGGCGAATGCCCTGATTGCGGTTaGTCTTTAGGGCACACAACA | + |
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Preference number: 4 (lower is better) Translates to: VVGSMAVLGRQHMLHLGECPDCG*SLGHTT Trigger: TGTTGTGTGCCCTAAAGACCAACCGCAATCAGGGCA...TTCGCCGAGGTGGAGCATGTGCTGCCGACCTAGCACAGCCATGGAGCCTACCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118207.8 ENSMUST00000121911.8 |
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| CDS-3UTR GCA 90 bp | GTGGTAGGCTCCATGGCTGTGCTAGGTCGGCAGCACATGCTCCACCTCGGCGAAAGCTGCCAGAATTTCTaGTGCTCCTTGGCTTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: VVGSMAVLGRQHMLHLGESCQNF*CSLAWF Trigger: AAACCAAGCCAAGGAGCAGCAGAAATTCTGGCAGCT...TTCGCCGAGGTGGAGCATGTGCTGCCGACCTAGCACAGCCATGGAGCCTACCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027884.13 ENSMUST00000118207.8 ENSMUST00000121911.8 |
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| CDS-3UTR GCA 90 bp | GAGCTGGTGGTAGGCTCCATGGCTGTGCTAGGTCGGCAGCACATGCTCCACCTCAGCTGCCAGAATTTCTaGTGCTCCTTGGCTTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: ELVVGSMAVLGRQHMLHLSCQNF*CSLAWF Trigger: AAACCAAGCCAAGGAGCAGCAGAAATTCTGGCAGCT...GAGGTGGAGCATGTGCTGCCGACCTAGCACAGCCATGGAGCCTACCACCAGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027884.13 ENSMUST00000118207.8 ENSMUST00000121911.8 |
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| CDS-3UTR GCA 90 bp | GAGCTGGTGGTAGGCTCCATGGCTGTGCTAGGTCGGCAGCACATGCTCCACCTCTCCATCTTTCCTAGCTaGCAGAATTTCTGCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: ELVVGSMAVLGRQHMLHLSIFPS*QNFCCS Trigger: GGAGCAGCAGAAATTCTGGCAGCTAGGAAAGATGGA...GAGGTGGAGCATGTGCTGCCGACCTAGCACAGCCATGGAGCCTACCACCAGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027884.13 ENSMUST00000118207.8 ENSMUST00000121911.8 |
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| CDS-3UTR CCA 90 bp | GAGCTGGTGGTAGGCTCCATGGCTGTGCTAGGTCGGCAGCACATGCTCCACCTCCCTCGTTGGTTTTGGTaGCACCACATTCTTGTCACA | + |
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Preference number: 4 (lower is better) Translates to: ELVVGSMAVLGRQHMLHLPRWFW*HHILVT Trigger: TGTGACAAGAATGTGGTGCCACCAAAACCAACGAGG...GAGGTGGAGCATGTGCTGCCGACCTAGCACAGCCATGGAGCCTACCACCAGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027884.13 ENSMUST00000118207.8 ENSMUST00000121911.8 |
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| CDS-3UTR CCA 90 bp | GTAGGCTCCATGGCTGTGCTAGGTCGGCAGCACATGCTCCACCTCGGCGAAGTTTGCCCTGATTGCGGTTaGTCTTTAGGGCACACAACA | + |
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Preference number: 4 (lower is better) Translates to: VGSMAVLGRQHMLHLGEVCPDCG*SLGHTT Trigger: TGTTGTGTGCCCTAAAGACCAACCGCAATCAGGGCA...AACTTCGCCGAGGTGGAGCATGTGCTGCCGACCTAGCACAGCCATGGAGCCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118207.8 ENSMUST00000121911.8 |
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| CDS-3UTR TCA 90 bp | GAGCTGGTGGTAGGCTCCATGGCTGTGCTAGGTCGGCAGCACATGCTCCACCTCTCCTTGGCTTGGTTTTaGAAGGGAAGCTTGTTGTTC | + |
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Preference number: 4 (lower is better) Translates to: ELVVGSMAVLGRQHMLHLSLAWF*KGSLLF Trigger: GAACAACAAGCTTCCCTTTCAAAACCAAGCCAAGGA...GAGGTGGAGCATGTGCTGCCGACCTAGCACAGCCATGGAGCCTACCACCAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027884.13 ENSMUST00000118207.8 ENSMUST00000121911.8 |
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| CDS-3UTR TCA 90 bp | GTTGGAGGGTGTTTAAGAGGGCAGAAAAGTCTGCTGTGTAGCTCAGGAGTCAGGCACCCAGGCATGGTGTaGAGGTCTCCCCTGATTGCG | + |
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Preference number: 4 (lower is better) Translates to: VGGCLRGQKSLLCSSGVRHPGMV*RSPLIA Trigger: CGCAATCAGGGGAGACCTTCACACCATGCCTGGGTG...CCTGACTCCTGAGCTACACAGCAGACTTTTCTGCCCTCTTAAACACCCTCCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027884.13 |
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| CDS-3UTR CCA 90 bp | GCTGGTGGTAGGCTCCATGGCTGTGCTAGGTCGGCAGCACATGCTCCACCTCGGATTTCTGCTGCTCCTTaGCTTGGTTTTGAAAGGGAA | + |
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Preference number: 4 (lower is better) Translates to: AGGRLHGCARSAAHAPPRISAAP*LGFERE Trigger: TTCCCTTTCAAAACCAAGCCAAGGAGCAGCAGAAAT...CCGAGGTGGAGCATGTGCTGCCGACCTAGCACAGCCATGGAGCCTACCACCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027884.13 ENSMUST00000118207.8 ENSMUST00000121911.8 |
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| CDS-3UTR TCA 90 bp | GGGGTTGGAGGGTGTTTAAGAGGGCAGAAAAGTCTGCTGTGTAGCTCAGGAGTCGTTCTCTCACCTCCCTaGGTTCGTTCTTCAGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: GVGGCLRGQKSLLCSSGVVLSPP*VRSSAP Trigger: GGGAGCTGAAGAACGAACTCAGGGAGGTGAGAGAAC...GACTCCTGAGCTACACAGCAGACTTTTCTGCCCTCTTAAACACCCTCCAACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027884.13 ENSMUST00000118207.8 ENSMUST00000121911.8 ENSMUST00000187546.7 |
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| CDS-3UTR GCA 90 bp | GTAGGCTCCATGGCTGTGCTAGGTCGGCAGCACATGCTCCACCTCGGCGAAGTTTCAGCTTCGGTTCCATaGAAACAGCCTTGTAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: VGSMAVLGRQHMLHLGEVSASVP*KQPCSS Trigger: AGAACTACAAGGCTGTTTGCATGGAACCGAAGCTGA...AACTTCGCCGAGGTGGAGCATGTGCTGCCGACCTAGCACAGCCATGGAGCCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027884.13 ENSMUST00000118207.8 |
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| CDS-3UTR CCA 90 bp | GGAGGGTGTTTAAGAGGGCAGAAAAGTCTGCTGTGTAGCTCAGGAGTCAGGAGAAAAGGCACCCAGGCATaGTGTGAAGGTCTCCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: GGCLRGQKSLLCSSGVRRKGTQA*CEGLLP Trigger: GGGCAGGAGACCTTCACACCATGCCTGGGTGCCTTT...TCTCCTGACTCCTGAGCTACACAGCAGACTTTTCTGCCCTCTTAAACACCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118207.8 ENSMUST00000121911.8 |
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| CDS-3UTR TCA 90 bp | GTTGGAGGGTGTTTAAGAGGGCAGAAAAGTCTGCTGTGTAGCTCAGGAGTCAGGGTTCTCTCACCTCCCTaGGTTCGTTCTTCAGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: VGGCLRGQKSLLCSSGVRVLSPP*VRSSAP Trigger: GGGAGCTGAAGAACGAACTCAGGGAGGTGAGAGAAC...CCTGACTCCTGAGCTACACAGCAGACTTTTCTGCCCTCTTAAACACCCTCCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027884.13 ENSMUST00000118207.8 ENSMUST00000121911.8 ENSMUST00000187546.7 |
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| 3UTR CAA 72 bp | CCATCGGGTTCTTCTGTGATCATGGCTTGGGAGCCTTaGTCCATCTTTCCTAGCTGCCAGAATTTCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: PSGSSVIMAWEP*SIFPSCQNFCC Trigger: GCAGCAGAAATTCTGGCAGCTAGGAAAGATGGACAAAGGCTCCCAAGCCATGATCACAGAAGAACCCGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148649.3 |
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| CDS-3UTR GCA 90 bp | GGGGTTGGAGGGTGTTTAAGAGGGCAGAAAAGTCTGCTGTGTAGCTCAGGAGTCTCAGCTTCGGTTCCATaGAAACAGCCTTGTAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: GVGGCLRGQKSLLCSSGVSASVP*KQPCSS Trigger: AGAACTACAAGGCTGTTTGCATGGAACCGAAGCTGA...GACTCCTGAGCTACACAGCAGACTTTTCTGCCCTCTTAAACACCCTCCAACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027884.13 ENSMUST00000118207.8 ENSMUST00000187546.7 |
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| CDS-3UTR GCA 90 bp | AGAAAGCAGCTCCAGACGACAAGGGTGAAAAAGGCACCCAGGCATGGTGTGAAGTCAGCTTCGGTTCCATaGAAACAGCCTTGTAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: RKQLQTTRVKKAPRHGVKSASVP*KQPCSS Trigger: AGAACTACAAGGCTGTTTGCATGGAACCGAAGCTGA...CTTCACACCATGCCTGGGTGCCTTTTTCACCCTTGTCGTCTGGAGCTGCTTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148649.3 |
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| CDS-3UTR GCA 90 bp | GTTGGAGGGTGTTTAAGAGGGCAGAAAAGTCTGCTGTGTAGCTCAGGAGTCAGGAGCTGCCAGAATTTCTaGTGCTCCTTGGCTTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VGGCLRGQKSLLCSSGVRSCQNF*CSLAWF Trigger: AAACCAAGCCAAGGAGCAGCAGAAATTCTGGCAGCT...CCTGACTCCTGAGCTACACAGCAGACTTTTCTGCCCTCTTAAACACCCTCCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027884.13 ENSMUST00000118207.8 ENSMUST00000121911.8 ENSMUST00000187546.7 |
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| CDS-3UTR GCA 90 bp | GGCAGAAAAGTCTGCTGTGTAGCTCAGGAGTCAGGAGATGATGAGTTGGAGCTGAGCTGCCAGAATTTCTaGTGCTCCTTGGCTTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: GRKVCCVAQESGDDELELSCQNF*CSLAWF Trigger: AAACCAAGCCAAGGAGCAGCAGAAATTCTGGCAGCT...CAGCTCCAACTCATCATCTCCTGACTCCTGAGCTACACAGCAGACTTTTCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027884.13 ENSMUST00000118207.8 ENSMUST00000121911.8 ENSMUST00000187546.7 |
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| CDS-3UTR GCA 90 bp | GGCAGAAAAGTCTGCTGTGTAGCTCAGGAGTCAGGAGATGATGAGTTGGAGCTGTCCATCTTTCCTAGCTaGCAGAATTTCTGCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: GRKVCCVAQESGDDELELSIFPS*QNFCCS Trigger: GGAGCAGCAGAAATTCTGGCAGCTAGGAAAGATGGA...CAGCTCCAACTCATCATCTCCTGACTCCTGAGCTACACAGCAGACTTTTCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027884.13 ENSMUST00000118207.8 ENSMUST00000121911.8 ENSMUST00000187546.7 |
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| CDS-3UTR GCA 90 bp | GTTGGAGGGTGTTTAAGAGGGCAGAAAAGTCTGCTGTGTAGCTCAGGAGTCAGGTCCATCTTTCCTAGCTaGCAGAATTTCTGCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: VGGCLRGQKSLLCSSGVRSIFPS*QNFCCS Trigger: GGAGCAGCAGAAATTCTGGCAGCTAGGAAAGATGGA...CCTGACTCCTGAGCTACACAGCAGACTTTTCTGCCCTCTTAAACACCCTCCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027884.13 ENSMUST00000118207.8 ENSMUST00000121911.8 ENSMUST00000187546.7 |
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| CDS-3UTR CCA 90 bp | GGCAGAAAAGTCTGCTGTGTAGCTCAGGAGTCAGGAGATGATGAGTTGGAGCTGCAGTGGATTCCTCGTTaGTTTTGGTGGCACCACATT | + |
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Preference number: 4 (lower is better) Translates to: GRKVCCVAQESGDDELELQWIPR*FWWHHI Trigger: AATGTGGTGCCACCAAAACCAACGAGGAATCCACTG...CAGCTCCAACTCATCATCTCCTGACTCCTGAGCTACACAGCAGACTTTTCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027884.13 ENSMUST00000118207.8 ENSMUST00000121911.8 ENSMUST00000187546.7 |
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| CDS-3UTR CCA 90 bp | GTTGGAGGGTGTTTAAGAGGGCAGAAAAGTCTGCTGTGTAGCTCAGGAGTCAGGCAGTGGATTCCTCGTTaGTTTTGGTGGCACCACATT | + |
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Preference number: 4 (lower is better) Translates to: VGGCLRGQKSLLCSSGVRQWIPR*FWWHHI Trigger: AATGTGGTGCCACCAAAACCAACGAGGAATCCACTG...CCTGACTCCTGAGCTACACAGCAGACTTTTCTGCCCTCTTAAACACCCTCCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027884.13 ENSMUST00000118207.8 ENSMUST00000121911.8 ENSMUST00000187546.7 |
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| CDS-3UTR CCA 90 bp | GAGGGCAGAAAAGTCTGCTGTGTAGCTCAGGAGTCAGGAGATGATGAGTTGGAGCAGTGGATTCCTCGTTaGTTTTGGTGGCACCACATT | + |
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Preference number: 4 (lower is better) Translates to: EGRKVCCVAQESGDDELEQWIPR*FWWHHI Trigger: AATGTGGTGCCACCAAAACCAACGAGGAATCCACTG...CTCCAACTCATCATCTCCTGACTCCTGAGCTACACAGCAGACTTTTCTGCCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027884.13 ENSMUST00000118207.8 ENSMUST00000121911.8 ENSMUST00000187546.7 |
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| CDS-3UTR TCA 90 bp | GGCAGAAAAGTCTGCTGTGTAGCTCAGGAGTCAGGAGATGATGAGTTGGAGCTGTCCTTGGCTTGGTTTTaGAAGGGAAGCTTGTTGTTC | + |
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Preference number: 4 (lower is better) Translates to: GRKVCCVAQESGDDELELSLAWF*KGSLLF Trigger: GAACAACAAGCTTCCCTTTCAAAACCAAGCCAAGGA...CAGCTCCAACTCATCATCTCCTGACTCCTGAGCTACACAGCAGACTTTTCTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027884.13 ENSMUST00000118207.8 ENSMUST00000121911.8 ENSMUST00000187546.7 |
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| CDS-3UTR GCA 90 bp | GGAGGGTGTTTAAGAGGGCAGAAAAGTCTGCTGTGTAGCTCAGGAGTCAGGAGATCAGCTTCGGTTCCATaGAAACAGCCTTGTAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: GGCLRGQKSLLCSSGVRRSASVP*KQPCSS Trigger: AGAACTACAAGGCTGTTTGCATGGAACCGAAGCTGA...TCTCCTGACTCCTGAGCTACACAGCAGACTTTTCTGCCCTCTTAAACACCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027884.13 ENSMUST00000118207.8 ENSMUST00000187546.7 |
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| CDS-3UTR CCA 90 bp | GGGGTTGGAGGGTGTTTAAGAGGGCAGAAAAGTCTGCTGTGTAGCTCAGGAGTCATTTCTGCTGCTCCTTaGCTTGGTTTTGAAAGGGAA | + |
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Preference number: 4 (lower is better) Translates to: GVGGCLRGQKSLLCSSGVISAAP*LGFERE Trigger: TTCCCTTTCAAAACCAAGCCAAGGAGCAGCAGAAAT...GACTCCTGAGCTACACAGCAGACTTTTCTGCCCTCTTAAACACCCTCCAACCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000027884.13 ENSMUST00000118207.8 ENSMUST00000121911.8 ENSMUST00000187546.7 |
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| CDS-3UTR TCA 90 bp | GAGGGCAGAAAAGTCTGCTGTGTAGCTCAGGAGTCAGGAGATGATGAGTTGGAGCCACCTCGGCGAAGTTaGAGTACAGATAAATTAGAA | + |
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Preference number: 4 (lower is better) Translates to: EGRKVCCVAQESGDDELEPPRRS*STDKLE Trigger: TTCTAATTTATCTGTACTTCAACTTCGCCGAGGTGG...CTCCAACTCATCATCTCCTGACTCCTGAGCTACACAGCAGACTTTTCTGCCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187546.7 |
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| CDS-3UTR GCA 90 bp | GGGGTTGGAGGGTGTTTAAGAGGGCAGAAAAGTCTGCTGTGTAGCTCAGGAGTCTCGTCCATATCCTGCTaGATTTCCTTCATAATTTCC | + |
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Preference number: 4 (lower is better) Translates to: GVGGCLRGQKSLLCSSGVSSISC*ISFIIS Trigger: GGAAATTATGAAGGAAATGCAGCAGGATATGGACGA...GACTCCTGAGCTACACAGCAGACTTTTCTGCCCTCTTAAACACCCTCCAACCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027884.13 ENSMUST00000118207.8 ENSMUST00000121911.8 ENSMUST00000187546.7 |
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| CDS-3UTR CCA 90 bp | GAGGGCAGAAAAGTCTGCTGTGTAGCTCAGGAGTCAGGAGATGATGAGTTGGAGATTTCTGCTGCTCCTTaGCTTGGTTTTGAAAGGGAA | + |
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Preference number: 4 (lower is better) Translates to: EGRKVCCVAQESGDDELEISAAP*LGFERE Trigger: TTCCCTTTCAAAACCAAGCCAAGGAGCAGCAGAAAT...CTCCAACTCATCATCTCCTGACTCCTGAGCTACACAGCAGACTTTTCTGCCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027884.13 ENSMUST00000118207.8 ENSMUST00000121911.8 ENSMUST00000187546.7 |
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| CDS-3UTR CCA 90 bp | GGCAGAAAAGTCTGCTGTGTAGCTCAGGAGTCAGGAGATGATGAGTTGGAGCTGATTTCTGCTGCTCCTTaGCTTGGTTTTGAAAGGGAA | + |
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Preference number: 4 (lower is better) Translates to: GRKVCCVAQESGDDELELISAAP*LGFERE Trigger: TTCCCTTTCAAAACCAAGCCAAGGAGCAGCAGAAAT...CAGCTCCAACTCATCATCTCCTGACTCCTGAGCTACACAGCAGACTTTTCTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027884.13 ENSMUST00000118207.8 ENSMUST00000121911.8 ENSMUST00000187546.7 |
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| CDS-3UTR CAA 90 bp | GCTGGTGGTAGGCTCCATGGCTGTGCTAGGTCGGCAGCACATGCTCCACCTCGGATGGCTTGGGAGCCTTaGTCCATCTTTCCTAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: AGGRLHGCARSAAHAPPRMAWEP*SIFPSC Trigger: GCAGCTAGGAAAGATGGACAAAGGCTCCCAAGCCAT...CCGAGGTGGAGCATGTGCTGCCGACCTAGCACAGCCATGGAGCCTACCACCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027884.13 ENSMUST00000118207.8 ENSMUST00000121911.8 |
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| CDS GCA 90 bp | CTCTGTCCCGCCTCCATTCAGCAGGAGCCCACAGAGGCCCCACCGTaGCCTGCAACACTCTTCCTTTACCAGGTTAGTTTTCTTCAGTTC | + |
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Preference number: 5 (lower is better) Translates to: LCPASIQQEPTEAPP*PATLFLYQVSFLQF Trigger: GAACTGAAGAAAACTAACCTGGTAAAGGAAGAGTGTTGCAGGGCACGGTGGGGCCTCTGTGGGCTCCTGCTGAATGGAGGCGGGACAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148649.3 |
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| CDS-3UTR CAA 90 bp | TCCATGGCTGTGCTAGGTCGGCAGCACATGCTCCACCTCGGCGAAGTTGAAGTAATGGCTTGGGAGCCTTaGTCCATCTTTCCTAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: SMAVLGRQHMLHLGEVEVMAWEP*SIFPSC Trigger: GCAGCTAGGAAAGATGGACAAAGGCTCCCAAGCCAT...TACTTCAACTTCGCCGAGGTGGAGCATGTGCTGCCGACCTAGCACAGCCATGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027884.13 ENSMUST00000118207.8 ENSMUST00000121911.8 |
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| CDS GCA 90 bp | AGGGTGAAAAAGGCACCCAGGCATGGTGTGAAGGTCTCCCCTGATTaGGGTTGGTCTTTAGGGCACACAACAAACATTTCTCGCAGCAAC | + |
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Preference number: 5 (lower is better) Translates to: RVKKAPRHGVKVSPD*GWSLGHTTNISRSN Trigger: GTTGCTGCGAGAAATGTTTGTTGTGTGCCCTAAAGACCAACCGCAATCAGGGGAGACCTTCACACCATGCCTGGGTGCCTTTTTCACCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027884.13 ENSMUST00000119526.2 |
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| CDS CCA 90 bp | TGTGAAGGTCTCGCAGCAACTCTGACATGGATGGAGGGACTCCAGTaGATTCCTCGTTGGTTTTGGTGGCACCACATTCTTGTCACAAGC | + |
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Preference number: 5 (lower is better) Translates to: CEGLAATLTWMEGLQ*IPRWFWWHHILVTS Trigger: GCTTGTGACAAGAATGTGGTGCCACCAAAACCAACGAGGAATCCACTGGAGTCCCTCCATCCATGTCAGAGTTGCTGCGAGACCTTCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187546.7 |
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| CDS-3UTR CAA 90 bp | GAGGGCAGAAAAGTCTGCTGTGTAGCTCAGGAGTCAGGAGATGATGAGTTGGAGATGGCTTGGGAGCCTTaGTCCATCTTTCCTAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: EGRKVCCVAQESGDDELEMAWEP*SIFPSC Trigger: GCAGCTAGGAAAGATGGACAAAGGCTCCCAAGCCAT...CTCCAACTCATCATCTCCTGACTCCTGAGCTACACAGCAGACTTTTCTGCCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027884.13 ENSMUST00000118207.8 ENSMUST00000121911.8 ENSMUST00000187546.7 |
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| CDS-3UTR CAA 90 bp | GGAGGGTGTTTAAGAGGGCAGAAAAGTCTGCTGTGTAGCTCAGGAGTCAGGAGAATGGCTTGGGAGCCTTaGTCCATCTTTCCTAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: GGCLRGQKSLLCSSGVRRMAWEP*SIFPSC Trigger: GCAGCTAGGAAAGATGGACAAAGGCTCCCAAGCCAT...TCTCCTGACTCCTGAGCTACACAGCAGACTTTTCTGCCCTCTTAAACACCCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027884.13 ENSMUST00000118207.8 ENSMUST00000121911.8 ENSMUST00000187546.7 |
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| CDS-3UTR CAA 90 bp | GTTGGAGGGTGTTTAAGAGGGCAGAAAAGTCTGCTGTGTAGCTCAGGAGTCAGGGGTGGCACCACATTCTaGTCACAAGCCAATGGTGCT | + |
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Preference number: 5 (lower is better) Translates to: VGGCLRGQKSLLCSSGVRGGTTF*SQANGA Trigger: AGCACCATTGGCTTGTGACAAGAATGTGGTGCCACC...CCTGACTCCTGAGCTACACAGCAGACTTTTCTGCCCTCTTAAACACCCTCCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027884.13 ENSMUST00000118207.8 ENSMUST00000121911.8 ENSMUST00000187546.7 |
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| CDS GCA 72 bp | GCCTCCATTCAGCAGGAGCCCACAGAGGCCCCACCGTaGCCTGCAACACTCTTCCTTTACCAGGTTAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: ASIQQEPTEAPP*PATLFLYQVSF Trigger: AAAACTAACCTGGTAAAGGAAGAGTGTTGCAGGGCACGGTGGGGCCTCTGTGGGCTCCTGCTGAATGGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148649.3 |
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| CDS CCA 72 bp | GCTCCAGACGACAAGGGTGAAAAAGGCACCCAGGCATaGTGTGAAGGTCTCGCAGCAACTCTGACATGGATG | + |
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Preference number: 6 (lower is better) Translates to: APDDKGEKGTQA*CEGLAATLTWM Trigger: CATCCATGTCAGAGTTGCTGCGAGACCTTCACACCATGCCTGGGTGCCTTTTTCACCCTTGTCGTCTGGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000187546.7 |
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| CDS TCA 72 bp | GAAAAAGGCACCCAGGCATGGTGTGAAGGTCTCCCCTaGTTGCGGTTGGTCTTTAGGGCACACAACAAACAT | + |
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Preference number: 6 (lower is better) Translates to: EKGTQAWCEGLP*LRLVFRAHNKH Trigger: ATGTTTGTTGTGTGCCCTAAAGACCAACCGCAATCAGGGGAGACCTTCACACCATGCCTGGGTGCCTTTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027884.13 ENSMUST00000119526.2 |
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| CDS GCA 72 bp | AAGGCACCCAGGCATGGTGTGAAGGTCTCCCCTGATTaGGGTTGGTCTTTAGGGCACACAACAAACATTTCT | + |
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Preference number: 6 (lower is better) Translates to: KAPRHGVKVSPD*GWSLGHTTNIS Trigger: AGAAATGTTTGTTGTGTGCCCTAAAGACCAACCGCAATCAGGGGAGACCTTCACACCATGCCTGGGTGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027884.13 ENSMUST00000119526.2 |
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