Pregenerated sensors for TEX33 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062154Ensembl transcript IDs: ENSMUST00000074380.14, ENSMUST00000165170.8, ENSMUST00000169575.2, ENSMUST00000229878.2
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCATTCTTCCGGTGCCACCGGCCCAGGTCATCCGTCTTCCTCCCGTaGCAGTGTTCCACATCCCTCACCGACTTCTCTATCACCTCGGGC | + |
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Preference number: 5 (lower is better) Translates to: AFFRCHRPRSSVFLP*QCSTSLTDFSITSG Trigger: GCCCGAGGTGATAGAGAAGTCGGTGAGGGATGTGGAACACTGGCACGGGAGGAAGACGGATGACCTGGGCCGGTGGCACCGGAAGAATGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074380.14 ENSMUST00000165170.8 ENSMUST00000169575.2 |
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| CDS CCA 90 bp | TTCTTGCTCAGAGGCACTGTCCTCTGCTCTGGGGACCTGGAGTCTTaGCCTTCCTCCCCGACACATCCCTCTCGGAAGGTCTCCCTGGCA | + |
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Preference number: 5 (lower is better) Translates to: FLLRGTVLCSGDLES*PSSPTHPSRKVSLA Trigger: TGCCAGGGAGACCTTCCGAGAGGGATGTGTCGGGGAGGAAGGCCAAGACTCCAGGTCCCCAGAGCAGAGGACAGTGCCTCTGAGCAAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074380.14 ENSMUST00000165170.8 ENSMUST00000169575.2 ENSMUST00000229878.2 |
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| CDS CCA 90 bp | CGCTGTCCTTCTTGCTCAGAGGCACTGTCCTCTGCTCTGGGGACCTaGAGTCTTGGCCTTCCTCCCCGACACATCCCTCTCGGAAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: RCPSCSEALSSALGT*SLGLPPRHIPLGRS Trigger: AGACCTTCCGAGAGGGATGTGTCGGGGAGGAAGGCCAAGACTCCAGGTCCCCAGAGCAGAGGACAGTGCCTCTGAGCAAGAAGGACAGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074380.14 ENSMUST00000165170.8 ENSMUST00000169575.2 ENSMUST00000229878.2 |
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| CDS CCA 90 bp | AGTCTTGGCCTTCCTCCCCGACACATCCCTCTCGGAAGGTCTCCCTaGCATCTCTCGAGCTGGATCTGGATGCCCCCTTCTTCAGGTCCT | + |
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Preference number: 5 (lower is better) Translates to: SLGLPPRHIPLGRSP*HLSSWIWMPPSSGP Trigger: AGGACCTGAAGAAGGGGGCATCCAGATCCAGCTCGAGAGATGCCAGGGAGACCTTCCGAGAGGGATGTGTCGGGGAGGAAGGCCAAGACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000074380.14 ENSMUST00000165170.8 ENSMUST00000169575.2 ENSMUST00000229878.2 |
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| CDS CCA 90 bp | AGGAATGACGCTGTCCTTCTTGCTCAGAGGCACTGTCCTCTGCTCTaGGGACCTGGAGTCTTGGCCTTCCTCCCCGACACATCCCTCTCG | + |
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Preference number: 5 (lower is better) Translates to: RNDAVLLAQRHCPLL*GPGVLAFLPDTSLS Trigger: CGAGAGGGATGTGTCGGGGAGGAAGGCCAAGACTCCAGGTCCCCAGAGCAGAGGACAGTGCCTCTGAGCAAGAAGGACAGCGTCATTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074380.14 ENSMUST00000165170.8 ENSMUST00000169575.2 ENSMUST00000229878.2 |
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| CDS GCA 90 bp | TTCTCAGGAATGACGCTGTCCTTCTTGCTCAGAGGCACTGTCCTCTaGTCTGGGGACCTGGAGTCTTGGCCTTCCTCCCCGACACATCCC | + |
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Preference number: 5 (lower is better) Translates to: FSGMTLSFLLRGTVL*SGDLESWPSSPTHP Trigger: GGGATGTGTCGGGGAGGAAGGCCAAGACTCCAGGTCCCCAGAGCAGAGGACAGTGCCTCTGAGCAAGAAGGACAGCGTCATTCCTGAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074380.14 ENSMUST00000165170.8 ENSMUST00000169575.2 ENSMUST00000229878.2 |
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| CDS TCA 90 bp | GAAAATGGAGGAGGCTTGCATGGGGCTCTGGGTCCTGCTAGGCCATaGGCTTGGCCTCTTCTGGCCCTCAAACATTTCACCAATGGCCTG | + |
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Preference number: 5 (lower is better) Translates to: ENGGGLHGALGPARP*AWPLLALKHFTNGL Trigger: CAGGCCATTGGTGAAATGTTTGAGGGCCAGAAGAGGCCAAGCTCATGGCCTAGCAGGACCCAGAGCCCCATGCAAGCCTCCTCCATTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074380.14 ENSMUST00000165170.8 ENSMUST00000169575.2 |
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| CDS TCA 90 bp | GGTCCACCATCTTGCTCCCAAATTTGTGGCGGATGTTCTCAGGAATaGCGCTGTCCTTCTTGCTCAGAGGCACTGTCCTCTGCTCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: GPPSCSQICGGCSQE*RCPSCSEALSSALG Trigger: CCCCAGAGCAGAGGACAGTGCCTCTGAGCAAGAAGGACAGCGTCATTCCTGAGAACATCCGCCACAAATTTGGGAGCAAGATGGTGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074380.14 ENSMUST00000165170.8 ENSMUST00000169575.2 |
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| CDS TCA 90 bp | CCCTCACCGACTTCTCTATCACCTCGGGCGTGTAGGAAGCCTTCATaGGGCTCTTTGTCTCCTGGGGTGGGCCTTGAAACAAGTTGGATC | + |
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Preference number: 5 (lower is better) Translates to: PSPTSLSPRACRKPS*GSLSPGVGLETSWI Trigger: GATCCAACTTGTTTCAAGGCCCACCCCAGGAGACAAAGAGCCTCATGAAGGCTTCCTACACGCCCGAGGTGATAGAGAAGTCGGTGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074380.14 ENSMUST00000165170.8 ENSMUST00000169575.2 |
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| CDS CCA 90 bp | CCCTGGCCCAGGGAGCTGCCTAAGGGGCTCTGGGAGAGCCTTGCATaGTACTTAAATTTGGAGTTGTCCAAGGAGCTATGGTTAGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: PWPRELPKGLWESLA*YLNLELSKELWLAL Trigger: CAGAGCTAACCATAGCTCCTTGGACAACTCCAAATTTAAGTACCATGCAAGGCTCTCCCAGAGCCCCTTAGGCAGCTCCCTGGGCCAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074380.14 ENSMUST00000165170.8 ENSMUST00000169575.2 ENSMUST00000229878.2 |
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| CDS CCA 90 bp | CTCGGGCGTGTAGGAAGCCTTCATGAGGCTCTTTGTCTCCTGGGGTaGGCCTTGAAACAAGTTGGATCGCATGTGGTAGCCCAGGTCATA | + |
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Preference number: 5 (lower is better) Translates to: LGRVGSLHEALCLLG*ALKQVGSHVVAQVI Trigger: TATGACCTGGGCTACCACATGCGATCCAACTTGTTTCAAGGCCCACCCCAGGAGACAAAGAGCCTCATGAAGGCTTCCTACACGCCCGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074380.14 ENSMUST00000165170.8 ENSMUST00000169575.2 |
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| CDS GCA 90 bp | GAGTTGTCCAAGGAGCTATGGTTAGCTCTGAAGGAGTTCATGTCCTaGTGGCCCTCCTTGTCGTTCGGGTGTGTCCTTGTCAACGTGGTT | + |
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Preference number: 5 (lower is better) Translates to: ELSKELWLALKEFMS*WPSLSFGCVLVNVV Trigger: AACCACGTTGACAAGGACACACCCGAACGACAAGGAGGGCCAGCAGGACATGAACTCCTTCAGAGCTAACCATAGCTCCTTGGACAACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074380.14 ENSMUST00000165170.8 ENSMUST00000229878.2 |
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| CDS CCA 90 bp | TTGTCCAAGGAGCTATGGTTAGCTCTGAAGGAGTTCATGTCCTGCTaGCCCTCCTTGTCGTTCGGGTGTGTCCTTGTCAACGTGGTTGTA | + |
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Preference number: 5 (lower is better) Translates to: LSKELWLALKEFMSC*PSLSFGCVLVNVVV Trigger: TACAACCACGTTGACAAGGACACACCCGAACGACAAGGAGGGCCAGCAGGACATGAACTCCTTCAGAGCTAACCATAGCTCCTTGGACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074380.14 ENSMUST00000165170.8 ENSMUST00000229878.2 |
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| CDS CCA 90 bp | GAGAGCCTTGCATGGTACTTAAATTTGGAGTTGTCCAAGGAGCTATaGTTAGCTCTGAAGGAGTTCATGTCCTGCTGGCCCTCCTTGTCG | + |
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Preference number: 5 (lower is better) Translates to: ESLAWYLNLELSKEL*LALKEFMSCWPSLS Trigger: CGACAAGGAGGGCCAGCAGGACATGAACTCCTTCAGAGCTAACCATAGCTCCTTGGACAACTCCAAATTTAAGTACCATGCAAGGCTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074380.14 ENSMUST00000165170.8 ENSMUST00000229878.2 |
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| CDS CAA 90 bp | CTTCTTGCTCAGAGGCACTGTCCTCTGCTCTGGGGACCTGGAGTCTaGGCCTTCCTCCCCGACACATCCCTCTCGGAAGGTCTCCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: LLAQRHCPLLWGPGV*AFLPDTSLSEGLPG Trigger: GCCAGGGAGACCTTCCGAGAGGGATGTGTCGGGGAGGAAGGCCAAGACTCCAGGTCCCCAGAGCAGAGGACAGTGCCTCTGAGCAAGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074380.14 ENSMUST00000165170.8 ENSMUST00000169575.2 ENSMUST00000229878.2 |
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| CDS GCA 72 bp | CGGTGCCACCGGCCCAGGTCATCCGTCTTCCTCCCGTaGCAGTGTTCCACATCCCTCACCGACTTCTCTATC | + |
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Preference number: 6 (lower is better) Translates to: RCHRPRSSVFLP*QCSTSLTDFSI Trigger: GATAGAGAAGTCGGTGAGGGATGTGGAACACTGGCACGGGAGGAAGACGGATGACCTGGGCCGGTGGCACCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074380.14 ENSMUST00000165170.8 ENSMUST00000169575.2 |
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| CDS CCA 72 bp | AGAGGCACTGTCCTCTGCTCTGGGGACCTGGAGTCTTaGCCTTCCTCCCCGACACATCCCTCTCGGAAGGTC | + |
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Preference number: 6 (lower is better) Translates to: RGTVLCSGDLES*PSSPTHPSRKV Trigger: GACCTTCCGAGAGGGATGTGTCGGGGAGGAAGGCCAAGACTCCAGGTCCCCAGAGCAGAGGACAGTGCCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074380.14 ENSMUST00000165170.8 ENSMUST00000169575.2 ENSMUST00000229878.2 |
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| CDS CAA 72 bp | CAGAGGCACTGTCCTCTGCTCTGGGGACCTGGAGTCTaGGCCTTCCTCCCCGACACATCCCTCTCGGAAGGT | + |
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Preference number: 6 (lower is better) Translates to: QRHCPLLWGPGV*AFLPDTSLSEG Trigger: ACCTTCCGAGAGGGATGTGTCGGGGAGGAAGGCCAAGACTCCAGGTCCCCAGAGCAGAGGACAGTGCCTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074380.14 ENSMUST00000165170.8 ENSMUST00000169575.2 ENSMUST00000229878.2 |
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| CDS CCA 72 bp | CTTCCTCCCCGACACATCCCTCTCGGAAGGTCTCCCTaGCATCTCTCGAGCTGGATCTGGATGCCCCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: LPPRHIPLGRSP*HLSSWIWMPPS Trigger: AGAAGGGGGCATCCAGATCCAGCTCGAGAGATGCCAGGGAGACCTTCCGAGAGGGATGTGTCGGGGAGGAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000074380.14 ENSMUST00000165170.8 ENSMUST00000169575.2 ENSMUST00000229878.2 |
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| CDS CCA 72 bp | TCTTGCTCAGAGGCACTGTCCTCTGCTCTGGGGACCTaGAGTCTTGGCCTTCCTCCCCGACACATCCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: SCSEALSSALGT*SLGLPPRHIPL Trigger: GAGAGGGATGTGTCGGGGAGGAAGGCCAAGACTCCAGGTCCCCAGAGCAGAGGACAGTGCCTCTGAGCAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074380.14 ENSMUST00000165170.8 ENSMUST00000169575.2 ENSMUST00000229878.2 |
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| CDS CCA 72 bp | GCTGTCCTTCTTGCTCAGAGGCACTGTCCTCTGCTCTaGGGACCTGGAGTCTTGGCCTTCCTCCCCGACACA | + |
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Preference number: 6 (lower is better) Translates to: AVLLAQRHCPLL*GPGVLAFLPDT Trigger: TGTGTCGGGGAGGAAGGCCAAGACTCCAGGTCCCCAGAGCAGAGGACAGTGCCTCTGAGCAAGAAGGACAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074380.14 ENSMUST00000165170.8 ENSMUST00000169575.2 ENSMUST00000229878.2 |
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| CDS CCA 72 bp | CTCGGAAGGTCTCCCTGGCATCTCTCGAGCTGGATCTaGATGCCCCCTTCTTCAGGTCCTCAGGATGGGAGT | + |
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Preference number: 6 (lower is better) Translates to: LGRSPWHLSSWI*MPPSSGPQDGS Trigger: ACTCCCATCCTGAGGACCTGAAGAAGGGGGCATCCAGATCCAGCTCGAGAGATGCCAGGGAGACCTTCCGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000074380.14 ENSMUST00000165170.8 ENSMUST00000169575.2 ENSMUST00000229878.2 |
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| CDS CAA 72 bp | TGTCCTGCTGGCCCTCCTTGTCGTTCGGGTGTGTCCTaGTCAACGTGGTTGTACCTTGTCGGTGGCTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: CPAGPPCRSGVS*STWLYLVGGSA Trigger: AGCTGAGCCACCGACAAGGTACAACCACGTTGACAAGGACACACCCGAACGACAAGGAGGGCCAGCAGGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074380.14 ENSMUST00000165170.8 ENSMUST00000229878.2 |
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| CDS GCA 72 bp | GCTTTCTGCAAGTTCATGTTCATAGCATTCTTCCGGTaGCACCGGCCCAGGTCATCCGTCTTCCTCCCGTGC | + |
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Preference number: 6 (lower is better) Translates to: AFCKFMFIAFFR*HRPRSSVFLPC Trigger: GCACGGGAGGAAGACGGATGACCTGGGCCGGTGGCACCGGAAGAATGCTATGAACATGAACTTGCAGAAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074380.14 ENSMUST00000165170.8 ENSMUST00000169575.2 |
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| CDS CAA 90 bp | GAGCTATGGTTAGCTCTGAAGGAGTTCATGTCCTGCTGGCCCTCCTaGTCGTTCGGGTGTGTCCTTGTCAACGTGGTTGTACCTTGTCGG | + |
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Preference number: 6 (lower is better) Translates to: ELWLALKEFMSCWPS*SFGCVLVNVVVPCR Trigger: CCGACAAGGTACAACCACGTTGACAAGGACACACCCGAACGACAAGGAGGGCCAGCAGGACATGAACTCCTTCAGAGCTAACCATAGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074380.14 ENSMUST00000165170.8 ENSMUST00000229878.2 |
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| CDS TCA 72 bp | ACTTCTCTATCACCTCGGGCGTGTAGGAAGCCTTCATaGGGCTCTTTGTCTCCTGGGGTGGGCCTTGAAACA | + |
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Preference number: 6 (lower is better) Translates to: TSLSPRACRKPS*GSLSPGVGLET Trigger: TGTTTCAAGGCCCACCCCAGGAGACAAAGAGCCTCATGAAGGCTTCCTACACGCCCGAGGTGATAGAGAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074380.14 ENSMUST00000165170.8 ENSMUST00000169575.2 |
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| CDS CCA 72 bp | GAGCTATGGTTAGCTCTGAAGGAGTTCATGTCCTGCTaGCCCTCCTTGTCGTTCGGGTGTGTCCTTGTCAAC | + |
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Preference number: 6 (lower is better) Translates to: ELWLALKEFMSC*PSLSFGCVLVN Trigger: GTTGACAAGGACACACCCGAACGACAAGGAGGGCCAGCAGGACATGAACTCCTTCAGAGCTAACCATAGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074380.14 ENSMUST00000165170.8 ENSMUST00000229878.2 |
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| CDS CCA 72 bp | GGCTCTTTGTCTCCTGGGGTGGGCCTTGAAACAAGTTaGATCGCATGTGGTAGCCCAGGTCATAGTAGTCTG | + |
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Preference number: 6 (lower is better) Translates to: GSLSPGVGLETS*IACGSPGHSSL Trigger: CAGACTACTATGACCTGGGCTACCACATGCGATCCAACTTGTTTCAAGGCCCACCCCAGGAGACAAAGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074380.14 ENSMUST00000165170.8 ENSMUST00000169575.2 |
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| CDS CCA 72 bp | GTAGGAAGCCTTCATGAGGCTCTTTGTCTCCTGGGGTaGGCCTTGAAACAAGTTGGATCGCATGTGGTAGCC | + |
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Preference number: 6 (lower is better) Translates to: VGSLHEALCLLG*ALKQVGSHVVA Trigger: GGCTACCACATGCGATCCAACTTGTTTCAAGGCCCACCCCAGGAGACAAAGAGCCTCATGAAGGCTTCCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074380.14 ENSMUST00000165170.8 ENSMUST00000169575.2 |
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| CDS CCA 72 bp | AGCTTGGCCTCTTCTGGCCCTCAAACATTTCACCAATaGCCTGTCGAGCCTGATCCTCAGAGATCAGTTGGT | + |
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Preference number: 6 (lower is better) Translates to: SLASSGPQTFHQ*PVEPDPQRSVG Trigger: ACCAACTGATCTCTGAGGATCAGGCTCGACAGGCCATTGGTGAAATGTTTGAGGGCCAGAAGAGGCCAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074380.14 ENSMUST00000165170.8 ENSMUST00000169575.2 |
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| CDS CAA 72 bp | ACCAATGGCCTGTCGAGCCTGATCCTCAGAGATCAGTaGGTCCACCATCTTGCTCCCAAATTTGTGGCGGAT | + |
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Preference number: 6 (lower is better) Translates to: TNGLSSLILRDQ*VHHLAPKFVAD Trigger: ATCCGCCACAAATTTGGGAGCAAGATGGTGGACCAACTGATCTCTGAGGATCAGGCTCGACAGGCCATTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074380.14 ENSMUST00000165170.8 ENSMUST00000169575.2 |
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| CDS TCA 72 bp | TCTTGCTCCCAAATTTGTGGCGGATGTTCTCAGGAATaGCGCTGTCCTTCTTGCTCAGAGGCACTGTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: SCSQICGGCSQE*RCPSCSEALSS Trigger: AGAGGACAGTGCCTCTGAGCAAGAAGGACAGCGTCATTCCTGAGAACATCCGCCACAAATTTGGGAGCAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074380.14 ENSMUST00000165170.8 ENSMUST00000169575.2 |
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| CDS CAA 90 bp | AAACATTTCACCAATGGCCTGTCGAGCCTGATCCTCAGAGATCAGTaGGTCCACCATCTTGCTCCCAAATTTGTGGCGGATGTTCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: KHFTNGLSSLILRDQ*VHHLAPKFVADVLR Trigger: CCTGAGAACATCCGCCACAAATTTGGGAGCAAGATGGTGGACCAACTGATCTCTGAGGATCAGGCTCGACAGGCCATTGGTGAAATGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074380.14 ENSMUST00000165170.8 ENSMUST00000169575.2 |
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| CDS CCA 72 bp | GAGATCAGTTGGTCCACCATCTTGCTCCCAAATTTGTaGCGGATGTTCTCAGGAATGACGCTGTCCTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: EISWSTILLPNL*RMFSGMTLSFL Trigger: CAAGAAGGACAGCGTCATTCCTGAGAACATCCGCCACAAATTTGGGAGCAAGATGGTGGACCAACTGATCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074380.14 ENSMUST00000165170.8 ENSMUST00000169575.2 |
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| CDS CAA 72 bp | TCAGAGATCAGTTGGTCCACCATCTTGCTCCCAAATTaGTGGCGGATGTTCTCAGGAATGACGCTGTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: SEISWSTILLPN*WRMFSGMTLSF Trigger: GAAGGACAGCGTCATTCCTGAGAACATCCGCCACAAATTTGGGAGCAAGATGGTGGACCAACTGATCTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074380.14 ENSMUST00000165170.8 ENSMUST00000169575.2 |
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| CDS CCA 72 bp | GCATGGTACTTAAATTTGGAGTTGTCCAAGGAGCTATaGTTAGCTCTGAAGGAGTTCATGTCCTGCTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: AWYLNLELSKEL*LALKEFMSCWP Trigger: GGGCCAGCAGGACATGAACTCCTTCAGAGCTAACCATAGCTCCTTGGACAACTCCAAATTTAAGTACCATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074380.14 ENSMUST00000165170.8 ENSMUST00000229878.2 |
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