Pregenerated sensors for TEX30 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026049Ensembl transcript IDs: ENSMUST00000027215.12, ENSMUST00000127923.8, ENSMUST00000128190.8, ENSMUST00000129702.2, ENSMUST00000133677.8, ENSMUST00000147571.8, ENSMUST00000147661.8, ENSMUST00000150911.8, ENSMUST00000152239.8, ENSMUST00000156392.8
Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CAAATGAGACCTCGAACAAAATCATCAGCATCATCTGGCTCAGTATaGCACATCACAGAAGCAGCTGCCCTTGAGCCCATTGAACGACCT | + |
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Preference number: 5 (lower is better) Translates to: QMRPRTKSSASSGSV*HITEAAALEPIERP Trigger: AGGTCGTTCAATGGGCTCAAGGGCAGCTGCTTCTGTGATGTGTCATACTGAGCCAGATGATGCTGATGATTTTGTTCGAGGTCTCATTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000027215.12 ENSMUST00000128190.8 ENSMUST00000133677.8 ENSMUST00000147571.8 ENSMUST00000147661.8 ENSMUST00000150911.8 ENSMUST00000152239.8 ENSMUST00000156392.8 |
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| CDS TCA 90 bp | GTTTATGCTGCTGCTTTGGATGGTGCAGTGGGTAAGAAATACAAATaGGACCTCGAACAAAATCATCAGCATCATCTGGCTCAGTATGAC | + |
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Preference number: 5 (lower is better) Translates to: VYAAALDGAVGKKYK*DLEQNHQHHLAQYD Trigger: GTCATACTGAGCCAGATGATGCTGATGATTTTGTTCGAGGTCTCATTTGTATTTCTTACCCACTGCACCATCCAAAGCAGCAGCATAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000027215.12 ENSMUST00000128190.8 ENSMUST00000129702.2 ENSMUST00000133677.8 ENSMUST00000147571.8 ENSMUST00000147661.8 ENSMUST00000150911.8 ENSMUST00000152239.8 ENSMUST00000156392.8 |
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| CDS TCA 90 bp | ACACAAACAGTACAGGATCCTTTATACGAAAGAGATCTTCGTCTCTaGGTTTATGCTGCTGCTTTGGATGGTGCAGTGGGTAAGAAATAC | + |
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Preference number: 5 (lower is better) Translates to: TQTVQDPLYERDLRL*VYAAALDGAVGKKY Trigger: GTATTTCTTACCCACTGCACCATCCAAAGCAGCAGCATAAACTCAGAGACGAAGATCTCTTTCGTATAAAGGATCCTGTACTGTTTGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000027215.12 ENSMUST00000128190.8 ENSMUST00000129702.2 ENSMUST00000133677.8 ENSMUST00000147571.8 ENSMUST00000150911.8 ENSMUST00000152239.8 ENSMUST00000156392.8 |
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| CDS CCA 90 bp | CTTTATACGAAAGAGATCTTCGTCTCTGAGTTTATGCTGCTGCTTTaGATGGTGCAGTGGGTAAGAAATACAAATGAGACCTCGAACAAA | + |
|
Preference number: 5 (lower is better) Translates to: LYTKEIFVSEFMLLL*MVQWVRNTNETSNK Trigger: TTTGTTCGAGGTCTCATTTGTATTTCTTACCCACTGCACCATCCAAAGCAGCAGCATAAACTCAGAGACGAAGATCTCTTTCGTATAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000027215.12 ENSMUST00000128190.8 ENSMUST00000129702.2 ENSMUST00000133677.8 ENSMUST00000147571.8 ENSMUST00000150911.8 ENSMUST00000152239.8 ENSMUST00000156392.8 |
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| CDS CAA 72 bp | CTGGCTCAGTATGACACATCACAGAAGCAGCTGCCCTaGAGCCCATTGAACGACCTCCAAGAAAAACACCAG | + |
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Preference number: 6 (lower is better) Translates to: LAQYDTSQKQLP*SPLNDLQEKHQ Trigger: CTGGTGTTTTTCTTGGAGGTCGTTCAATGGGCTCAAGGGCAGCTGCTTCTGTGATGTGTCATACTGAGCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000027215.12 ENSMUST00000128190.8 ENSMUST00000133677.8 ENSMUST00000147571.8 ENSMUST00000147661.8 ENSMUST00000150911.8 ENSMUST00000152239.8 ENSMUST00000156392.8 |
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| CDS CCA 72 bp | ACAAATGAGACCTCGAACAAAATCATCAGCATCATCTaGCTCAGTATGACACATCACAGAAGCAGCTGCCCT | + |
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Preference number: 6 (lower is better) Translates to: TNETSNKIISII*LSMTHHRSSCP Trigger: AGGGCAGCTGCTTCTGTGATGTGTCATACTGAGCCAGATGATGCTGATGATTTTGTTCGAGGTCTCATTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000027215.12 ENSMUST00000128190.8 ENSMUST00000129702.2 ENSMUST00000133677.8 ENSMUST00000147571.8 ENSMUST00000147661.8 ENSMUST00000150911.8 ENSMUST00000152239.8 ENSMUST00000156392.8 |
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| CDS TCA 72 bp | GCTGCTTTGGATGGTGCAGTGGGTAAGAAATACAAATaGGACCTCGAACAAAATCATCAGCATCATCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: AALDGAVGKKYK*DLEQNHQHHLA Trigger: AGCCAGATGATGCTGATGATTTTGTTCGAGGTCTCATTTGTATTTCTTACCCACTGCACCATCCAAAGCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000027215.12 ENSMUST00000128190.8 ENSMUST00000129702.2 ENSMUST00000133677.8 ENSMUST00000147571.8 ENSMUST00000147661.8 ENSMUST00000150911.8 ENSMUST00000152239.8 ENSMUST00000156392.8 |
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| CDS CCA 72 bp | AAAGAGATCTTCGTCTCTGAGTTTATGCTGCTGCTTTaGATGGTGCAGTGGGTAAGAAATACAAATGAGACC | + |
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Preference number: 6 (lower is better) Translates to: KEIFVSEFMLLL*MVQWVRNTNET Trigger: GGTCTCATTTGTATTTCTTACCCACTGCACCATCCAAAGCAGCAGCATAAACTCAGAGACGAAGATCTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000027215.12 ENSMUST00000128190.8 ENSMUST00000129702.2 ENSMUST00000133677.8 ENSMUST00000147571.8 ENSMUST00000150911.8 ENSMUST00000152239.8 ENSMUST00000156392.8 |
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| CDS TCA 72 bp | TTTCTCCAACAAGTTCTTTTCACACATTTCATCTGCTaGGCCCGACACAAACAGTACAGGATCCTTTATACG | + |
|
Preference number: 6 (lower is better) Translates to: FLQQVLFTHFIC*ARHKQYRILYT Trigger: CGTATAAAGGATCCTGTACTGTTTGTGTCGGGCTCAGCAGATGAAATGTGTGAAAAGAACTTGTTGGAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000027215.12 ENSMUST00000128190.8 ENSMUST00000129702.2 ENSMUST00000133677.8 ENSMUST00000147571.8 ENSMUST00000150911.8 ENSMUST00000152239.8 ENSMUST00000156392.8 |
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| CDS TCA 72 bp | ACCTCCAAGAAAAACACCAGCAAGTTTGTATTCTCCTaGGGTCTTCAGGTAATTCAAAACTGCTTTATATGC | + |
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Preference number: 6 (lower is better) Translates to: TSKKNTSKFVFS*GLQVIQNCFIC Trigger: GCATATAAAGCAGTTTTGAATTACCTGAAGACCTCAGGAGAATACAAACTTGCTGGTGTTTTTCTTGGAGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000027215.12 ENSMUST00000127923.8 ENSMUST00000128190.8 ENSMUST00000133677.8 ENSMUST00000147571.8 ENSMUST00000150911.8 ENSMUST00000152239.8 ENSMUST00000156392.8 |
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| CDS GCA 72 bp | TTCTTTGAATACATCATTTGTAGACCGTCCTTTCACTaGCATGGAATGATTTGCCTTTTCAATCCAATGAAT | + |
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Preference number: 6 (lower is better) Translates to: FFEYIICRPSFH*HGMICLFNPMN Trigger: ATTCATTGGATTGAAAAGGCAAATCATTCCATGGCAGTGAAAGGACGGTCTACAAATGATGTATTCAAAGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000027215.12 ENSMUST00000128190.8 ENSMUST00000133677.8 ENSMUST00000147571.8 ENSMUST00000150911.8 ENSMUST00000152239.8 ENSMUST00000156392.8 |
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