Pregenerated sensors for TEX28 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062564Ensembl transcript IDs: ENSMUST00000078060.4, ENSMUST00000114328.8
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTGCAATGTATCTCACTGGGCTTGCAGTTACAGAATTAAGAAAATaGGAGCAACAAAGTAGCTTACTAAAGAGGTCTTACTGGATGCCC | + |
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Preference number: 1 (lower is better) Translates to: SAMYLTGLAVTELRK*EQQSSLLKRSYWMP Trigger: GGGCATCCAGTAAGACCTCTTTAGTAAGCTACTTTGTTGCTCTCATTTTCTTAATTCTGTAACTGCAAGCCCAGTGAGATACATTGCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| 3UTR TCA 72 bp | CTTACTAAAGAGGTCTTACTGGATGCCCTCAACAACTaGAAGGAAGAAATTCGGGTGAATGGCACTTCTTGC | + |
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Preference number: 3 (lower is better) Translates to: LTKEVLLDALNN*KEEIRVNGTSC Trigger: GCAAGAAGTGCCATTCACCCGAATTTCTTCCTTTCAGTTGTTGAGGGCATCCAGTAAGACCTCTTTAGTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| 3UTR TCA 72 bp | TATCTCACTGGGCTTGCAGTTACAGAATTAAGAAAATaGGAGCAACAAAGTAGCTTACTAAAGAGGTCTTAC | + |
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Preference number: 3 (lower is better) Translates to: YLTGLAVTELRK*EQQSSLLKRSY Trigger: GTAAGACCTCTTTAGTAAGCTACTTTGTTGCTCTCATTTTCTTAATTCTGTAACTGCAAGCCCAGTGAGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS-3UTR TCA 90 bp | CAACAAAGTAGCTTACTAAAGAGGTCTTACTGGATGCCCTCAACAACTGAAAGGGCCCACTTTCAGCACTaGGCTTGTGGGACTGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: QQSSLLKRSYWMPSTTERAHFQH*ACGTAA Trigger: GGCTGCAGTCCCACAAGCTCAGTGCTGAAAGTGGGC...CCTTTCAGTTGTTGAGGGCATCCAGTAAGACCTCTTTAGTAAGCTACTTTGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS-3UTR TCA 90 bp | AGCTTACTAAAGAGGTCTTACTGGATGCCCTCAACAACTGAAAGGAAGAAATTCGAAGATGCGCAGGCGTaGGCTGAGCAAGGGCAAGGG | + |
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Preference number: 4 (lower is better) Translates to: SLLKRSYWMPSTTERKKFEDAQA*AEQGQG Trigger: CCCTTGCCCTTGCTCAGCTCACGCCTGCGCATCTTC...GAATTTCTTCCTTTCAGTTGTTGAGGGCATCCAGTAAGACCTCTTTAGTAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS-3UTR TCA 90 bp | AGCTTACTAAAGAGGTCTTACTGGATGCCCTCAACAACTGAAAGGAAGAAATTCGCCCACTTTCAGCACTaGGCTTGTGGGACTGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: SLLKRSYWMPSTTERKKFAHFQH*ACGTAA Trigger: GGCTGCAGTCCCACAAGCTCAGTGCTGAAAGTGGGC...GAATTTCTTCCTTTCAGTTGTTGAGGGCATCCAGTAAGACCTCTTTAGTAAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS-3UTR TCA 90 bp | AGCTTACTAAAGAGGTCTTACTGGATGCCCTCAACAACTGAAAGGAAGAAATTCCCTTGGGACGGGTTCTaGGGCTGGCCATCATCTCCA | + |
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Preference number: 4 (lower is better) Translates to: SLLKRSYWMPSTTERKKFPWDGF*GWPSSP Trigger: TGGAGATGATGGCCAGCCTCAGAACCCGTCCCAAGG...GAATTTCTTCCTTTCAGTTGTTGAGGGCATCCAGTAAGACCTCTTTAGTAAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS-3UTR GCA 90 bp | CAACAAAGTAGCTTACTAAAGAGGTCTTACTGGATGCCCTCAACAACTGAAAGGCTGAGCTTGTGGGACTaGAGCCCTCTTCCAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QQSSLLKRSYWMPSTTERLSLWD*SPLPAP Trigger: AGGAGCTGGAAGAGGGCTGCAGTCCCACAAGCTCAG...CCTTTCAGTTGTTGAGGGCATCCAGTAAGACCTCTTTAGTAAGCTACTTTGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS-3UTR CCA 90 bp | TTACTAAAGAGGTCTTACTGGATGCCCTCAACAACTGAAAGGAAGAAATTCGGGAAGAGGGCAGGTTGGTaGGGAGGGTTGCACTTGAGC | + |
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Preference number: 4 (lower is better) Translates to: LLKRSYWMPSTTERKKFGKRAGW*GGLHLS Trigger: GCTCAAGTGCAACCCTCCCCACCAACCTGCCCTCTT...CCCGAATTTCTTCCTTTCAGTTGTTGAGGGCATCCAGTAAGACCTCTTTAGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS-3UTR TCA 90 bp | AAGTTGGCATCTGCAATGTATCTCACTGGGCTTGCAGTTACAGAATTAAGAAAACCTTGGGACGGGTTCTaGGGCTGGCCATCATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KLASAMYLTGLAVTELRKPWDGF*GWPSSP Trigger: TGGAGATGATGGCCAGCCTCAGAACCCGTCCCAAGG...TTTTCTTAATTCTGTAACTGCAAGCCCAGTGAGATACATTGCAGATGCCAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS-3UTR GCA 90 bp | TTACTAAAGAGGTCTTACTGGATGCCCTCAACAACTGAAAGGAAGAAATTCGGGCACCTTCCCTCACATTaGGGGCAAGCTCACCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLKRSYWMPSTTERKKFGHLPSH*GQAHHL Trigger: CAGATGGTGAGCTTGCCCGCAATGTGAGGGAAGGTG...CCCGAATTTCTTCCTTTCAGTTGTTGAGGGCATCCAGTAAGACCTCTTTAGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS-3UTR GCA 90 bp | GGCATCTGCAATGTATCTCACTGGGCTTGCAGTTACAGAATTAAGAAAATGAGACTGAGCTTGTGGGACTaGAGCCCTCTTCCAGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: GICNVSHWACSYRIKKMRLSLWD*SPLPAP Trigger: AGGAGCTGGAAGAGGGCTGCAGTCCCACAAGCTCAG...TCTCATTTTCTTAATTCTGTAACTGCAAGCCCAGTGAGATACATTGCAGATGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS-3UTR CCA 90 bp | AGCTTACTAAAGAGGTCTTACTGGATGCCCTCAACAACTGAAAGGAAGAAATTCAAGAGGGCAGGTTGGTaGGGAGGGTTGCACTTGAGC | + |
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Preference number: 4 (lower is better) Translates to: SLLKRSYWMPSTTERKKFKRAGW*GGLHLS Trigger: GCTCAAGTGCAACCCTCCCCACCAACCTGCCCTCTT...GAATTTCTTCCTTTCAGTTGTTGAGGGCATCCAGTAAGACCTCTTTAGTAAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS-3UTR CCA 90 bp | GGCATCTGCAATGTATCTCACTGGGCTTGCAGTTACAGAATTAAGAAAATGAGATGTAAGAGGGCAGGTTaGTGGGGAGGGTTGCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: GICNVSHWACSYRIKKMRCKRAG*WGGLHL Trigger: CAAGTGCAACCCTCCCCACCAACCTGCCCTCTTACA...TCTCATTTTCTTAATTCTGTAACTGCAAGCCCAGTGAGATACATTGCAGATGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS-3UTR GCA 90 bp | TGCAATGTATCTCACTGGGCTTGCAGTTACAGAATTAAGAAAATGAGAGCAACACACCTTCCCTCACATTaGGGGCAAGCTCACCATCTG | + |
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Preference number: 4 (lower is better) Translates to: CNVSHWACSYRIKKMRATHLPSH*GQAHHL Trigger: CAGATGGTGAGCTTGCCCGCAATGTGAGGGAAGGTG...TGTTGCTCTCATTTTCTTAATTCTGTAACTGCAAGCCCAGTGAGATACATTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS-3UTR TCA 90 bp | CAACAAAGTAGCTTACTAAAGAGGTCTTACTGGATGCCCTCAACAACTGAAAGGCACTCTCAACTGCTCTaGGAGGTAGAAGATTCGATG | + |
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Preference number: 4 (lower is better) Translates to: QQSSLLKRSYWMPSTTERHSQLL*EVEDSM Trigger: CATCGAATCTTCTACCTCTCAGAGCAGTTGAGAGTG...CCTTTCAGTTGTTGAGGGCATCCAGTAAGACCTCTTTAGTAAGCTACTTTGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS-3UTR GCA 90 bp | GGCATCTGCAATGTATCTCACTGGGCTTGCAGTTACAGAATTAAGAAAATGAGAACTTTCCCACTTGGCTaGTTATGGCTGTCCAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: GICNVSHWACSYRIKKMRTFPLG*LWLSKP Trigger: TGGCTTGGACAGCCATAAGCAGCCAAGTGGGAAAGT...TCTCATTTTCTTAATTCTGTAACTGCAAGCCCAGTGAGATACATTGCAGATGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS-3UTR CCA 90 bp | CAACAAAGTAGCTTACTAAAGAGGTCTTACTGGATGCCCTCAACAACTGAAAGGGCCATCATCTCCAGTTaGGTAGCTTGCTGTAGAGTT | + |
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Preference number: 4 (lower is better) Translates to: QQSSLLKRSYWMPSTTERAIISS*VACCRV Trigger: AACTCTACAGCAAGCTACCCAACTGGAGATGATGGC...CCTTTCAGTTGTTGAGGGCATCCAGTAAGACCTCTTTAGTAAGCTACTTTGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS-3UTR GCA 90 bp | TTACTAAAGAGGTCTTACTGGATGCCCTCAACAACTGAAAGGAAGAAATTCGGGTCCAGTTGGGTAGCTTaGTGTAGAGTTTCTAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLKRSYWMPSTTERKKFGSSWVA*CRVSSL Trigger: CAAGCTAGAAACTCTACAGCAAGCTACCCAACTGGA...CCCGAATTTCTTCCTTTCAGTTGTTGAGGGCATCCAGTAAGACCTCTTTAGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS-3UTR CCA 90 bp | GGCATCTGCAATGTATCTCACTGGGCTTGCAGTTACAGAATTAAGAAAATGAGAGCCATCATCTCCAGTTaGGTAGCTTGCTGTAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GICNVSHWACSYRIKKMRAIISS*VACCRV Trigger: AACTCTACAGCAAGCTACCCAACTGGAGATGATGGC...TCTCATTTTCTTAATTCTGTAACTGCAAGCCCAGTGAGATACATTGCAGATGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS-3UTR CCA 90 bp | TTACTAAAGAGGTCTTACTGGATGCCCTCAACAACTGAAAGGAAGAAATTCGGGATAATAGAGATGACATaGCGCTTCTGCCAGGCCAAA | + |
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Preference number: 4 (lower is better) Translates to: LLKRSYWMPSTTERKKFGIIEMT*RFCQAK Trigger: TTTGGCCTGGCAGAAGCGCCATGTCATCTCTATTAT...CCCGAATTTCTTCCTTTCAGTTGTTGAGGGCATCCAGTAAGACCTCTTTAGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS-3UTR CCA 90 bp | CAACAAAGTAGCTTACTAAAGAGGTCTTACTGGATGCCCTCAACAACTGAAAGGATAATAGAGATGACATaGCGCTTCTGCCAGGCCAAA | + |
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Preference number: 4 (lower is better) Translates to: QQSSLLKRSYWMPSTTERIIEMT*RFCQAK Trigger: TTTGGCCTGGCAGAAGCGCCATGTCATCTCTATTAT...CCTTTCAGTTGTTGAGGGCATCCAGTAAGACCTCTTTAGTAAGCTACTTTGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS-3UTR TCA 90 bp | TGCAATGTATCTCACTGGGCTTGCAGTTACAGAATTAAGAAAATGAGAGCAACACACTCTCAACTGCTCTaGGAGGTAGAAGATTCGATG | + |
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Preference number: 4 (lower is better) Translates to: CNVSHWACSYRIKKMRATHSQLL*EVEDSM Trigger: CATCGAATCTTCTACCTCTCAGAGCAGTTGAGAGTG...TGTTGCTCTCATTTTCTTAATTCTGTAACTGCAAGCCCAGTGAGATACATTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS-3UTR TCA 90 bp | CAACAAAGTAGCTTACTAAAGAGGTCTTACTGGATGCCCTCAACAACTGAAAGGTGCATTTCTGATAAGTaGCTCTCTAGAGTAGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: QQSSLLKRSYWMPSTTERCISDK*LSRVED Trigger: GTCCTCTACTCTAGAGAGTCACTTATCAGAAATGCA...CCTTTCAGTTGTTGAGGGCATCCAGTAAGACCTCTTTAGTAAGCTACTTTGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS-3UTR TCA 90 bp | AAGTTGGCATCTGCAATGTATCTCACTGGGCTTGCAGTTACAGAATTAAGAAAATTTCTTTTCCTGGAGTaGCTCCAGTATCCTCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: KLASAMYLTGLAVTELRKFLFLE*LQYPLH Trigger: GTGCAGAGGATACTGGAGTCACTCCAGGAAAAGAAA...TTTTCTTAATTCTGTAACTGCAAGCCCAGTGAGATACATTGCAGATGCCAACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS-3UTR TCA 90 bp | TGCAATGTATCTCACTGGGCTTGCAGTTACAGAATTAAGAAAATGAGAGCAACATTTCTTTTCCTGGAGTaGCTCCAGTATCCTCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: CNVSHWACSYRIKKMRATFLFLE*LQYPLH Trigger: GTGCAGAGGATACTGGAGTCACTCCAGGAAAAGAAA...TGTTGCTCTCATTTTCTTAATTCTGTAACTGCAAGCCCAGTGAGATACATTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS-3UTR GCA 90 bp | AGCTTACTAAAGAGGTCTTACTGGATGCCCTCAACAACTGAAAGGAAGAAATTCTCCAGTTGGGTAGCTTaGTGTAGAGTTTCTAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: SLLKRSYWMPSTTERKKFSSWVA*CRVSSL Trigger: CAAGCTAGAAACTCTACAGCAAGCTACCCAACTGGA...GAATTTCTTCCTTTCAGTTGTTGAGGGCATCCAGTAAGACCTCTTTAGTAAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS-3UTR CCA 90 bp | CAACAAAGTAGCTTACTAAAGAGGTCTTACTGGATGCCCTCAACAACTGAAAGGCTTCCCCACCTGGCTTaGACAATTTGGAATATGAAA | + |
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Preference number: 4 (lower is better) Translates to: QQSSLLKRSYWMPSTTERLPHLA*TIWNMK Trigger: TTTCATATTCCAAATTGTCCAAGCCAGGTGGGGAAG...CCTTTCAGTTGTTGAGGGCATCCAGTAAGACCTCTTTAGTAAGCTACTTTGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS-3UTR CCA 90 bp | TTACTAAAGAGGTCTTACTGGATGCCCTCAACAACTGAAAGGAAGAAATTCGGGTTGGTTTTCTTTTCCTaGAGTGACTCCAGTATCCTC | + |
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Preference number: 4 (lower is better) Translates to: LLKRSYWMPSTTERKKFGLVFFS*SDSSIL Trigger: GAGGATACTGGAGTCACTCCAGGAAAAGAAAACCAA...CCCGAATTTCTTCCTTTCAGTTGTTGAGGGCATCCAGTAAGACCTCTTTAGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS-3UTR CCA 90 bp | CAACAAAGTAGCTTACTAAAGAGGTCTTACTGGATGCCCTCAACAACTGAAAGGAGATGCTGTTTGAGGTaGCAAATCTCATCCAGGTAT | + |
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Preference number: 4 (lower is better) Translates to: QQSSLLKRSYWMPSTTERRCCLR*QISSRY Trigger: ATACCTGGATGAGATTTGCCACCTCAAACAGCATCT...CCTTTCAGTTGTTGAGGGCATCCAGTAAGACCTCTTTAGTAAGCTACTTTGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS-3UTR TCA 90 bp | TTACTAAAGAGGTCTTACTGGATGCCCTCAACAACTGAAAGGAAGAAATTCGGGCTTTGGATACCAGTTTaGGGTAGCTCATGGTATTTT | + |
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Preference number: 4 (lower is better) Translates to: LLKRSYWMPSTTERKKFGLWIPV*GSSWYF Trigger: AAAATACCATGAGCTACCTCAAACTGGTATCCAAAG...CCCGAATTTCTTCCTTTCAGTTGTTGAGGGCATCCAGTAAGACCTCTTTAGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS-3UTR TCA 90 bp | TGCAATGTATCTCACTGGGCTTGCAGTTACAGAATTAAGAAAATGAGAGCAACAAGTTTTCGTTCAATGTaGGCAATAGTGGCAGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: CNVSHWACSYRIKKMRATSFRSM*AIVAEV Trigger: CACCTCTGCCACTATTGCTCACATTGAACGAAAACT...TGTTGCTCTCATTTTCTTAATTCTGTAACTGCAAGCCCAGTGAGATACATTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS-3UTR GCA 90 bp | TTACTAAAGAGGTCTTACTGGATGCCCTCAACAACTGAAAGGAAGAAATTCGGGTCTTCCTTCATCTTCTaGAAAAGCAGCTTTTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: LLKRSYWMPSTTERKKFGSSFIF*KSSFCC Trigger: GCAACAAAAGCTGCTTTTGCAGAAGATGAAGGAAGA...CCCGAATTTCTTCCTTTCAGTTGTTGAGGGCATCCAGTAAGACCTCTTTAGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS-3UTR CCA 90 bp | TTACTAAAGAGGTCTTACTGGATGCCCTCAACAACTGAAAGGAAGAAATTCGGGCTGGCTTGGACAATTTaGAATATGAAACTTTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: LLKRSYWMPSTTERKKFGLAWTI*NMKLSH Trigger: GTGGGAAAGTTTCATATTCCAAATTGTCCAAGCCAG...CCCGAATTTCTTCCTTTCAGTTGTTGAGGGCATCCAGTAAGACCTCTTTAGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS-3UTR CCA 90 bp | GGCATCTGCAATGTATCTCACTGGGCTTGCAGTTACAGAATTAAGAAAATGAGACTTCCCCACCTGGCTTaGACAATTTGGAATATGAAA | + |
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Preference number: 4 (lower is better) Translates to: GICNVSHWACSYRIKKMRLPHLA*TIWNMK Trigger: TTTCATATTCCAAATTGTCCAAGCCAGGTGGGGAAG...TCTCATTTTCTTAATTCTGTAACTGCAAGCCCAGTGAGATACATTGCAGATGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS-3UTR CCA 90 bp | GGCATCTGCAATGTATCTCACTGGGCTTGCAGTTACAGAATTAAGAAAATGAGATTGGTTTTCTTTTCCTaGAGTGACTCCAGTATCCTC | + |
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Preference number: 4 (lower is better) Translates to: GICNVSHWACSYRIKKMRLVFFS*SDSSIL Trigger: GAGGATACTGGAGTCACTCCAGGAAAAGAAAACCAA...TCTCATTTTCTTAATTCTGTAACTGCAAGCCCAGTGAGATACATTGCAGATGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS-3UTR CCA 90 bp | TTACTAAAGAGGTCTTACTGGATGCCCTCAACAACTGAAAGGAAGAAATTCGGGCCATCAGTGATTGTTTaGTTTTCTTTTCCTGGAGTG | + |
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Preference number: 4 (lower is better) Translates to: LLKRSYWMPSTTERKKFGPSVIV*FSFPGV Trigger: CACTCCAGGAAAAGAAAACCAAACAATCACTGATGG...CCCGAATTTCTTCCTTTCAGTTGTTGAGGGCATCCAGTAAGACCTCTTTAGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS-3UTR CCA 90 bp | AGCTTACTAAAGAGGTCTTACTGGATGCCCTCAACAACTGAAAGGAAGAAATTCAGATGCTGTTTGAGGTaGCAAATCTCATCCAGGTAT | + |
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Preference number: 4 (lower is better) Translates to: SLLKRSYWMPSTTERKKFRCCLR*QISSRY Trigger: ATACCTGGATGAGATTTGCCACCTCAAACAGCATCT...GAATTTCTTCCTTTCAGTTGTTGAGGGCATCCAGTAAGACCTCTTTAGTAAGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS-3UTR TCA 90 bp | AGCTTACTAAAGAGGTCTTACTGGATGCCCTCAACAACTGAAAGGAAGAAATTCCTTTGGATACCAGTTTaGGGTAGCTCATGGTATTTT | + |
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Preference number: 4 (lower is better) Translates to: SLLKRSYWMPSTTERKKFLWIPV*GSSWYF Trigger: AAAATACCATGAGCTACCTCAAACTGGTATCCAAAG...GAATTTCTTCCTTTCAGTTGTTGAGGGCATCCAGTAAGACCTCTTTAGTAAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS-3UTR TCA 90 bp | TGCAATGTATCTCACTGGGCTTGCAGTTACAGAATTAAGAAAATGAGAGCAACAGGACAATTTGGAATATaGAACTTTCCCACTTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: CNVSHWACSYRIKKMRATGQFGI*NFPTWL Trigger: CAGCCAAGTGGGAAAGTTTCATATTCCAAATTGTCC...TGTTGCTCTCATTTTCTTAATTCTGTAACTGCAAGCCCAGTGAGATACATTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS-3UTR TCA 90 bp | AAGTTGGCATCTGCAATGTATCTCACTGGGCTTGCAGTTACAGAATTAAGAAAATGCATTTCTGATAAGTaGCTCTCTAGAGTAGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: KLASAMYLTGLAVTELRKCISDK*LSRVED Trigger: GTCCTCTACTCTAGAGAGTCACTTATCAGAAATGCA...TTTTCTTAATTCTGTAACTGCAAGCCCAGTGAGATACATTGCAGATGCCAACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS-3UTR TCA 90 bp | TTACTAAAGAGGTCTTACTGGATGCCCTCAACAACTGAAAGGAAGAAATTCGGGCACATACTTTTTGTCTaGGAATTTCCTCTGTTGCAT | + |
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Preference number: 4 (lower is better) Translates to: LLKRSYWMPSTTERKKFGHILFV*EFPLLH Trigger: ATGCAACAGAGGAAATTCTCAGACAAAAAGTATGTG...CCCGAATTTCTTCCTTTCAGTTGTTGAGGGCATCCAGTAAGACCTCTTTAGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS-3UTR TCA 90 bp | CAACAAAGTAGCTTACTAAAGAGGTCTTACTGGATGCCCTCAACAACTGAAAGGCACATACTTTTTGTCTaGGAATTTCCTCTGTTGCAT | + |
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Preference number: 4 (lower is better) Translates to: QQSSLLKRSYWMPSTTERHILFV*EFPLLH Trigger: ATGCAACAGAGGAAATTCTCAGACAAAAAGTATGTG...CCTTTCAGTTGTTGAGGGCATCCAGTAAGACCTCTTTAGTAAGCTACTTTGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS-3UTR TCA 90 bp | AGCTTACTAAAGAGGTCTTACTGGATGCCCTCAACAACTGAAAGGAAGAAATTCTCATATGACTTTCTTTaGGGCTTTGATGGGATACCT | + |
|
Preference number: 4 (lower is better) Translates to: SLLKRSYWMPSTTERKKFSYDFL*GFDGIP Trigger: AGGTATCCCATCAAAGCCTCAAAGAAAGTCATATGA...GAATTTCTTCCTTTCAGTTGTTGAGGGCATCCAGTAAGACCTCTTTAGTAAGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
||
| CDS-3UTR TCA 90 bp | GGCATCTGCAATGTATCTCACTGGGCTTGCAGTTACAGAATTAAGAAAATGAGATGGTTATTCTGCTCTTaGAAATCTCCATTACATCCC | + |
|
Preference number: 4 (lower is better) Translates to: GICNVSHWACSYRIKKMRWLFCS*KSPLHP Trigger: GGGATGTAATGGAGATTTTCAAGAGCAGAATAACCA...TCTCATTTTCTTAATTCTGTAACTGCAAGCCCAGTGAGATACATTGCAGATGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
||
| CDS-3UTR TCA 90 bp | AGCTTACTAAAGAGGTCTTACTGGATGCCCTCAACAACTGAAAGGAAGAAATTCTGGTTATTCTGCTCTTaGAAATCTCCATTACATCCC | + |
|
Preference number: 4 (lower is better) Translates to: SLLKRSYWMPSTTERKKFWLFCS*KSPLHP Trigger: GGGATGTAATGGAGATTTTCAAGAGCAGAATAACCA...GAATTTCTTCCTTTCAGTTGTTGAGGGCATCCAGTAAGACCTCTTTAGTAAGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
||
| CDS-3UTR CCA 90 bp | CAACAAAGTAGCTTACTAAAGAGGTCTTACTGGATGCCCTCAACAACTGAAAGGTTGCACTTGAGCTCTTaGTACTTTCCACCTTTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QQSSLLKRSYWMPSTTERLHLSS*YFPPLK Trigger: TTTTAAAGGTGGAAAGTACCAAGAGCTCAAGTGCAA...CCTTTCAGTTGTTGAGGGCATCCAGTAAGACCTCTTTAGTAAGCTACTTTGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
||
| CDS-3UTR CCA 90 bp | AGCTTACTAAAGAGGTCTTACTGGATGCCCTCAACAACTGAAAGGAAGAAATTCCCATCAGTGATTGTTTaGTTTTCTTTTCCTGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLLKRSYWMPSTTERKKFPSVIV*FSFPGV Trigger: CACTCCAGGAAAAGAAAACCAAACAATCACTGATGG...GAATTTCTTCCTTTCAGTTGTTGAGGGCATCCAGTAAGACCTCTTTAGTAAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
||
| CDS-3UTR TCA 90 bp | AAGTTGGCATCTGCAATGTATCTCACTGGGCTTGCAGTTACAGAATTAAGAAAATCATATGACTTTCTTTaGGGCTTTGATGGGATACCT | + |
|
Preference number: 4 (lower is better) Translates to: KLASAMYLTGLAVTELRKSYDFL*GFDGIP Trigger: AGGTATCCCATCAAAGCCTCAAAGAAAGTCATATGA...TTTTCTTAATTCTGTAACTGCAAGCCCAGTGAGATACATTGCAGATGCCAACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
||
| CDS-3UTR GCA 90 bp | AAGTTGGCATCTGCAATGTATCTCACTGGGCTTGCAGTTACAGAATTAAGAAAATCTTCCTTCATCTTCTaGAAAAGCAGCTTTTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KLASAMYLTGLAVTELRKSSFIF*KSSFCC Trigger: GCAACAAAAGCTGCTTTTGCAGAAGATGAAGGAAGA...TTTTCTTAATTCTGTAACTGCAAGCCCAGTGAGATACATTGCAGATGCCAACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
||
| CDS-3UTR CCA 90 bp | AAGTTGGCATCTGCAATGTATCTCACTGGGCTTGCAGTTACAGAATTAAGAAAATTGCACTTGAGCTCTTaGTACTTTCCACCTTTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KLASAMYLTGLAVTELRKLHLSS*YFPPLK Trigger: TTTTAAAGGTGGAAAGTACCAAGAGCTCAAGTGCAA...TTTTCTTAATTCTGTAACTGCAAGCCCAGTGAGATACATTGCAGATGCCAACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
||
| CDS TCA 90 bp | ACTTGGCTGCTTATGGCTGTCCAAGCCACTGCCCACTTTCAGCACTaGGCTTGTGGGACTGCAGCCCTCTTCCAGCTCCTTCAGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TWLLMAVQATAHFQH*ACGTAALFQLLQLL Trigger: CAGCAGCTGAAGGAGCTGGAAGAGGGCTGCAGTCCCACAAGCTCAGTGCTGAAAGTGGGCAGTGGCTTGGACAGCCATAAGCAGCCAAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
||
| CDS GCA 90 bp | GGCTGTCCAAGCCACTGCCCACTTTCAGCACTGAGCTTGTGGGACTaGAGCCCTCTTCCAGCTCCTTCAGCTGCTGATGACACTGATAGA | + |
|
Preference number: 5 (lower is better) Translates to: GCPSHCPLSALSLWD*SPLPAPSAADDTDR Trigger: TCTATCAGTGTCATCAGCAGCTGAAGGAGCTGGAAGAGGGCTGCAGTCCCACAAGCTCAGTGCTGAAAGTGGGCAGTGGCTTGGACAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
||
| CDS CCA 90 bp | GCTTATGGCTGTCCAAGCCACTGCCCACTTTCAGCACTGAGCTTGTaGGACTGCAGCCCTCTTCCAGCTCCTTCAGCTGCTGATGACACT | + |
|
Preference number: 5 (lower is better) Translates to: AYGCPSHCPLSALSL*DCSPLPAPSAADDT Trigger: AGTGTCATCAGCAGCTGAAGGAGCTGGAAGAGGGCTGCAGTCCCACAAGCTCAGTGCTGAAAGTGGGCAGTGGCTTGGACAGCCATAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
||
| CDS TCA 90 bp | GATGGGCAGGCTATCTTCCCCACCTGGCTTGGACAATTTGGAATATaGAACTTTCCCACTTGGCTGCTTATGGCTGTCCAAGCCACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: DGQAIFPTWLGQFGI*NFPTWLLMAVQATA Trigger: GGCAGTGGCTTGGACAGCCATAAGCAGCCAAGTGGGAAAGTTTCATATTCCAAATTGTCCAAGCCAGGTGGGGAAGATAGCCTGCCCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
||
| CDS TCA 90 bp | AGTCCCAAGCCCAATGATCATAAATACAATGAAGATGCGCAGGCGTaGGCTGAGCAAGGGCAAGGGGCAAGAACACAATGTAGAGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: SPKPNDHKYNEDAQA*AEQGQGARTQCRDH Trigger: GTGGTCTCTACATTGTGTTCTTGCCCCTTGCCCTTGCTCAGCTCACGCCTGCGCATCTTCATTGTATTTATGATCATTGGGCTTGGGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
||
| CDS CCA 90 bp | GGCTTGGACAATTTGGAATATGAAACTTTCCCACTTGGCTGCTTATaGCTGTCCAAGCCACTGCCCACTTTCAGCACTGAGCTTGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GLDNLEYETFPLGCL*LSKPLPTFSTELVG Trigger: TCCCACAAGCTCAGTGCTGAAAGTGGGCAGTGGCTTGGACAGCCATAAGCAGCCAAGTGGGAAAGTTTCATATTCCAAATTGTCCAAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
||
| CDS-3UTR CAA 90 bp | TTACTAAAGAGGTCTTACTGGATGCCCTCAACAACTGAAAGGAAGAAATTCGGGGGTTGGTGGGGAGGGTaGCACTTGAGCTCTTGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: LLKRSYWMPSTTERKKFGGWWGG*HLSSWY Trigger: GTACCAAGAGCTCAAGTGCAACCCTCCCCACCAACC...CCCGAATTTCTTCCTTTCAGTTGTTGAGGGCATCCAGTAAGACCTCTTTAGTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
||
| CDS-3UTR CAA 90 bp | GGCATCTGCAATGTATCTCACTGGGCTTGCAGTTACAGAATTAAGAAAATGAGACTTTCAGCACTGAGCTaGTGGGACTGCAGCCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GICNVSHWACSYRIKKMRLSALS*WDCSPL Trigger: AAGAGGGCTGCAGTCCCACAAGCTCAGTGCTGAAAG...TCTCATTTTCTTAATTCTGTAACTGCAAGCCCAGTGAGATACATTGCAGATGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
||
| CDS-3UTR CAA 90 bp | CAACAAAGTAGCTTACTAAAGAGGTCTTACTGGATGCCCTCAACAACTGAAAGGCTGAACAAAAAGTCCTaGGGACGGGTTCTGAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QQSSLLKRSYWMPSTTERLNKKS*GRVLRL Trigger: CAGCCTCAGAACCCGTCCCAAGGACTTTTTGTTCAG...CCTTTCAGTTGTTGAGGGCATCCAGTAAGACCTCTTTAGTAAGCTACTTTGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
||
| CDS-3UTR CAA 90 bp | AAGTTGGCATCTGCAATGTATCTCACTGGGCTTGCAGTTACAGAATTAAGAAAACTTTCAGCACTGAGCTaGTGGGACTGCAGCCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: KLASAMYLTGLAVTELRKLSALS*WDCSPL Trigger: AAGAGGGCTGCAGTCCCACAAGCTCAGTGCTGAAAG...TTTTCTTAATTCTGTAACTGCAAGCCCAGTGAGATACATTGCAGATGCCAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
||
| CDS-3UTR CAA 90 bp | CAACAAAGTAGCTTACTAAAGAGGTCTTACTGGATGCCCTCAACAACTGAAAGGCTAGCATGGACCTTCTaGGCTTCTGTCAGTTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: QQSSLLKRSYWMPSTTERLAWTF*ASVSSS Trigger: GGAAGAACTGACAGAAGCCAAGAAGGTCCATGCTAG...CCTTTCAGTTGTTGAGGGCATCCAGTAAGACCTCTTTAGTAAGCTACTTTGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
||
| CDS-3UTR CAA 90 bp | CAACAAAGTAGCTTACTAAAGAGGTCTTACTGGATGCCCTCAACAACTGAAAGGCATGCCAGATGCTGTTaGAGGTGGCAAATCTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: QQSSLLKRSYWMPSTTERHARCC*RWQISS Trigger: GGATGAGATTTGCCACCTCAAACAGCATCTGGCATG...CCTTTCAGTTGTTGAGGGCATCCAGTAAGACCTCTTTAGTAAGCTACTTTGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
||
| CDS TCA 90 bp | AGGACAAATAGGCCATTTTCTCTTCAGTGCATGCCAGATGCTGTTTaGGGTGGCAAATCTCATCCAGGTATCTCTGCAAGTGATCATTCA | + |
|
Preference number: 5 (lower is better) Translates to: RTNRPFSLQCMPDAV*GGKSHPGISASDHS Trigger: TGAATGATCACTTGCAGAGATACCTGGATGAGATTTGCCACCTCAAACAGCATCTGGCATGCACTGAAGAGAAAATGGCCTATTTGTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
||
| CDS-3UTR CAA 90 bp | GGCATCTGCAATGTATCTCACTGGGCTTGCAGTTACAGAATTAAGAAAATGAGACATGCCAGATGCTGTTaGAGGTGGCAAATCTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: GICNVSHWACSYRIKKMRHARCC*RWQISS Trigger: GGATGAGATTTGCCACCTCAAACAGCATCTGGCATG...TCTCATTTTCTTAATTCTGTAACTGCAAGCCCAGTGAGATACATTGCAGATGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
||
| CDS-3UTR CAA 90 bp | TGCAATGTATCTCACTGGGCTTGCAGTTACAGAATTAAGAAAATGAGAGCAACACTAGCATGGACCTTCTaGGCTTCTGTCAGTTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: CNVSHWACSYRIKKMRATLAWTF*ASVSSS Trigger: GGAAGAACTGACAGAAGCCAAGAAGGTCCATGCTAG...TGTTGCTCTCATTTTCTTAATTCTGTAACTGCAAGCCCAGTGAGATACATTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
||
| CDS TCA 90 bp | ACATACTTTTTGTCTGAGAATTTCCTCTGTTGCATTTCTGATAAGTaGCTCTCTAGAGTAGAGGACCTAGCAACGTTGATGGGCAGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: TYFLSENFLCCISDK*LSRVEDLATLMGRL Trigger: TAGCCTGCCCATCAACGTTGCTAGGTCCTCTACTCTAGAGAGTCACTTATCAGAAATGCAACAGAGGAAATTCTCAGACAAAAAGTATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
||
| CDS-3UTR CAA 90 bp | CAACAAAGTAGCTTACTAAAGAGGTCTTACTGGATGCCCTCAACAACTGAAAGGTGGGCCACATACTTTTaGTCTGAGAATTTCCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: QQSSLLKRSYWMPSTTERWATYF*SENFLC Trigger: ACAGAGGAAATTCTCAGACAAAAAGTATGTGGCCCA...CCTTTCAGTTGTTGAGGGCATCCAGTAAGACCTCTTTAGTAAGCTACTTTGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
||
| CDS-3UTR CAA 90 bp | GGCATCTGCAATGTATCTCACTGGGCTTGCAGTTACAGAATTAAGAAAATGAGACCTGGCTTGGACAATTaGGAATATGAAACTTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GICNVSHWACSYRIKKMRPGLDN*EYETFP Trigger: TGGGAAAGTTTCATATTCCAAATTGTCCAAGCCAGG...TCTCATTTTCTTAATTCTGTAACTGCAAGCCCAGTGAGATACATTGCAGATGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
||
| CDS-3UTR CAA 90 bp | TTACTAAAGAGGTCTTACTGGATGCCCTCAACAACTGAAAGGAAGAAATTCGGGTGTAGAGTTTCTAGCTaGGTTATTCTGCTCTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LLKRSYWMPSTTERKKFGCRVSS*VILLLK Trigger: TTTCAAGAGCAGAATAACCAAGCTAGAAACTCTACA...CCCGAATTTCTTCCTTTCAGTTGTTGAGGGCATCCAGTAAGACCTCTTTAGTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
||
| CDS-3UTR CAA 90 bp | AAGTTGGCATCTGCAATGTATCTCACTGGGCTTGCAGTTACAGAATTAAGAAAATCCATCAGTGATTGTTaGGTTTTCTTTTCCTGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: KLASAMYLTGLAVTELRKSISDC*VFFSWS Trigger: ACTCCAGGAAAAGAAAACCAAACAATCACTGATGGA...TTTTCTTAATTCTGTAACTGCAAGCCCAGTGAGATACATTGCAGATGCCAACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
||
| CDS-3UTR CAA 90 bp | GGCATCTGCAATGTATCTCACTGGGCTTGCAGTTACAGAATTAAGAAAATGAGATTGGTTATTCTGCTCTaGAAAATCTCCATTACATCC | + |
|
Preference number: 5 (lower is better) Translates to: GICNVSHWACSYRIKKMRLVILL*KISITS Trigger: GGATGTAATGGAGATTTTCAAGAGCAGAATAACCAA...TCTCATTTTCTTAATTCTGTAACTGCAAGCCCAGTGAGATACATTGCAGATGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
||
| CDS-3UTR CAA 90 bp | AGCTTACTAAAGAGGTCTTACTGGATGCCCTCAACAACTGAAAGGAAGAAATTCTGTAGAGTTTCTAGCTaGGTTATTCTGCTCTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SLLKRSYWMPSTTERKKFCRVSS*VILLLK Trigger: TTTCAAGAGCAGAATAACCAAGCTAGAAACTCTACA...GAATTTCTTCCTTTCAGTTGTTGAGGGCATCCAGTAAGACCTCTTTAGTAAGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
||
| CDS-3UTR CAA 90 bp | AAGTTGGCATCTGCAATGTATCTCACTGGGCTTGCAGTTACAGAATTAAGAAAATTGGTTATTCTGCTCTaGAAAATCTCCATTACATCC | + |
|
Preference number: 5 (lower is better) Translates to: KLASAMYLTGLAVTELRKLVILL*KISITS Trigger: GGATGTAATGGAGATTTTCAAGAGCAGAATAACCAA...TTTTCTTAATTCTGTAACTGCAAGCCCAGTGAGATACATTGCAGATGCCAACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
||
| CDS CAA 90 bp | GCTGCTTATGGCTGTCCAAGCCACTGCCCACTTTCAGCACTGAGCTaGTGGGACTGCAGCCCTCTTCCAGCTCCTTCAGCTGCTGATGAC | + |
|
Preference number: 6 (lower is better) Translates to: AAYGCPSHCPLSALS*WDCSPLPAPSAADD Trigger: GTCATCAGCAGCTGAAGGAGCTGGAAGAGGGCTGCAGTCCCACAAGCTCAGTGCTGAAAGTGGGCAGTGGCTTGGACAGCCATAAGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
||
| CDS GCA 72 bp | AGCCACTGCCCACTTTCAGCACTGAGCTTGTGGGACTaGAGCCCTCTTCCAGCTCCTTCAGCTGCTGATGAC | + |
|
Preference number: 6 (lower is better) Translates to: SHCPLSALSLWD*SPLPAPSAADD Trigger: GTCATCAGCAGCTGAAGGAGCTGGAAGAGGGCTGCAGTCCCACAAGCTCAGTGCTGAAAGTGGGCAGTGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
||
| CDS CCA 72 bp | TGTCCAAGCCACTGCCCACTTTCAGCACTGAGCTTGTaGGACTGCAGCCCTCTTCCAGCTCCTTCAGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: CPSHCPLSALSL*DCSPLPAPSAA Trigger: AGCAGCTGAAGGAGCTGGAAGAGGGCTGCAGTCCCACAAGCTCAGTGCTGAAAGTGGGCAGTGGCTTGGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
||
| CDS TCA 72 bp | CTTATGGCTGTCCAAGCCACTGCCCACTTTCAGCACTaGGCTTGTGGGACTGCAGCCCTCTTCCAGCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LMAVQATAHFQH*ACGTAALFQLL Trigger: AAGGAGCTGGAAGAGGGCTGCAGTCCCACAAGCTCAGTGCTGAAAGTGGGCAGTGGCTTGGACAGCCATAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
||
| CDS CAA 90 bp | GTGGTCAGAGTGAGAAGCAGGCTTATGAATCTGAACAAAAAGTCCTaGGGACGGGTTCTGAGGCTGGCCATCATCTCCAGTTGGGTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: VVRVRSRLMNLNKKS*GRVLRLAIISSWVA Trigger: AGCTACCCAACTGGAGATGATGGCCAGCCTCAGAACCCGTCCCAAGGACTTTTTGTTCAGATTCATAAGCCTGCTTCTCACTCTGACCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
||
| CDS CAA 90 bp | GCAACGTTGATGGGCAGGCTATCTTCCCCACCTGGCTTGGACAATTaGGAATATGAAACTTTCCCACTTGGCTGCTTATGGCTGTCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: ATLMGRLSSPPGLDN*EYETFPLGCLWLSK Trigger: CTTGGACAGCCATAAGCAGCCAAGTGGGAAAGTTTCATATTCCAAATTGTCCAAGCCAGGTGGGGAAGATAGCCTGCCCATCAACGTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
||
| CDS CAA 90 bp | GAGGACCTAGCAACGTTGATGGGCAGGCTATCTTCCCCACCTGGCTaGGACAATTTGGAATATGAAACTTTCCCACTTGGCTGCTTATGG | + |
|
Preference number: 6 (lower is better) Translates to: EDLATLMGRLSSPPG*DNLEYETFPLGCLW Trigger: CCATAAGCAGCCAAGTGGGAAAGTTTCATATTCCAAATTGTCCAAGCCAGGTGGGGAAGATAGCCTGCCCATCAACGTTGCTAGGTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
||
| CDS TCA 72 bp | ACATTGCGGGCAAGCTCACCATCTGAGAAGCTAGTGTaGCTACTAGGGCAATCCTCACAGAAGGAAGACAGA | + |
|
Preference number: 6 (lower is better) Translates to: TLRASSPSEKLV*LLGQSSQKEDR Trigger: TCTGTCTTCCTTCTGTGAGGATTGCCCTAGTAGTCACACTAGCTTCTCAGATGGTGAGCTTGCCCGCAATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
||
| CDS CCA 72 bp | TTGGGACGGGTTCTGAGGCTGGCCATCATCTCCAGTTaGGTAGCTTGCTGTAGAGTTTCTAGCTTGGTTATT | + |
|
Preference number: 6 (lower is better) Translates to: LGRVLRLAIISS*VACCRVSSLVI Trigger: AATAACCAAGCTAGAAACTCTACAGCAAGCTACCCAACTGGAGATGATGGCCAGCCTCAGAACCCGTCCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
||
| CDS CAA 72 bp | ACAGAGACCTGTAAGAGGGCAGGTTGGTGGGGAGGGTaGCACTTGAGCTCTTGGTACTTTCCACCTTTAAAA | + |
|
Preference number: 6 (lower is better) Translates to: TETCKRAGWWGG*HLSSWYFPPLK Trigger: TTTTAAAGGTGGAAAGTACCAAGAGCTCAAGTGCAACCCTCCCCACCAACCTGCCCTCTTACAGGTCTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
||
| CDS CAA 72 bp | GCAACGTTGATGGGCAGGCTATCTTCCCCACCTGGCTaGGACAATTTGGAATATGAAACTTTCCCACTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: ATLMGRLSSPPG*DNLEYETFPLG Trigger: GCCAAGTGGGAAAGTTTCATATTCCAAATTGTCCAAGCCAGGTGGGGAAGATAGCCTGCCCATCAACGTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
||
| CDS CAA 72 bp | GTGAGAAGCAGGCTTATGAATCTGAACAAAAAGTCCTaGGGACGGGTTCTGAGGCTGGCCATCATCTCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: VRSRLMNLNKKS*GRVLRLAIISS Trigger: ACTGGAGATGATGGCCAGCCTCAGAACCCGTCCCAAGGACTTTTTGTTCAGATTCATAAGCCTGCTTCTCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
||
| CDS TCA 72 bp | CCCAATGATCATAAATACAATGAAGATGCGCAGGCGTaGGCTGAGCAAGGGCAAGGGGCAAGAACACAATGT | + |
|
Preference number: 6 (lower is better) Translates to: PNDHKYNEDAQA*AEQGQGARTQC Trigger: ACATTGTGTTCTTGCCCCTTGCCCTTGCTCAGCTCACGCCTGCGCATCTTCATTGTATTTATGATCATTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
||
| CDS CAA 72 bp | ATGGGCAGGCTATCTTCCCCACCTGGCTTGGACAATTaGGAATATGAAACTTTCCCACTTGGCTGCTTATGG | + |
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Preference number: 6 (lower is better) Translates to: MGRLSSPPGLDN*EYETFPLGCLW Trigger: CCATAAGCAGCCAAGTGGGAAAGTTTCATATTCCAAATTGTCCAAGCCAGGTGGGGAAGATAGCCTGCCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS TCA 72 bp | GCTATCTTCCCCACCTGGCTTGGACAATTTGGAATATaGAACTTTCCCACTTGGCTGCTTATGGCTGTCCAA | + |
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Preference number: 6 (lower is better) Translates to: AIFPTWLGQFGI*NFPTWLLMAVQ Trigger: TTGGACAGCCATAAGCAGCCAAGTGGGAAAGTTTCATATTCCAAATTGTCCAAGCCAGGTGGGGAAGATAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS GCA 72 bp | TTGGACAATTTGGAATATGAAACTTTCCCACTTGGCTaGTTATGGCTGTCCAAGCCACTGCCCACTTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: LDNLEYETFPLG*LWLSKPLPTFS Trigger: GCTGAAAGTGGGCAGTGGCTTGGACAGCCATAAGCAGCCAAGTGGGAAAGTTTCATATTCCAAATTGTCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS CCA 72 bp | AATTTGGAATATGAAACTTTCCCACTTGGCTGCTTATaGCTGTCCAAGCCACTGCCCACTTTCAGCACTGAG | + |
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Preference number: 6 (lower is better) Translates to: NLEYETFPLGCL*LSKPLPTFSTE Trigger: CTCAGTGCTGAAAGTGGGCAGTGGCTTGGACAGCCATAAGCAGCCAAGTGGGAAAGTTTCATATTCCAAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS CAA 72 bp | CCTCTGCACATCAATCATATGACTTTCTTTGAGGCTTaGATGGGATACCTGAAAGCTAGCATGGACCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: PLHINHMTFFEA*MGYLKASMDLL Trigger: AAGAAGGTCCATGCTAGCTTTCAGGTATCCCATCAAAGCCTCAAAGAAAGTCATATGATTGATGTGCAGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS TCA 72 bp | TTGTCTGAGAATTTCCTCTGTTGCATTTCTGATAAGTaGCTCTCTAGAGTAGAGGACCTAGCAACGTTGATG | + |
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Preference number: 6 (lower is better) Translates to: LSENFLCCISDK*LSRVEDLATLM Trigger: CATCAACGTTGCTAGGTCCTCTACTCTAGAGAGTCACTTATCAGAAATGCAACAGAGGAAATTCTCAGACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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| CDS TCA 72 bp | CTTGCTGTAGAGTTTCTAGCTTGGTTATTCTGCTCTTaGAAATCTCCATTACATCCCATATTTCCTTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: LAVEFLAWLFCS*KSPLHPIFPWL Trigger: GAGCCAAGGAAATATGGGATGTAATGGAGATTTTCAAGAGCAGAATAACCAAGCTAGAAACTCTACAGCAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078060.4 ENSMUST00000114328.8 |
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