Pregenerated sensors for TEX264 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040813Ensembl transcript IDs: ENSMUST00000046735.11, ENSMUST00000163441.8, ENSMUST00000169068.8
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GGAAGGAGGTTTAGGCTTGGAGCAGGACAACTCAGGCTCCTGGTACTCCCAGCCCAGTTCCTTAGCAAATaGACCACAGGAGGGTTGAGG | + |
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Preference number: 2 (lower is better) Translates to: GRRFRLGAGQLRLLVLPAQFLSK*TTGGLR Trigger: CCTCAACCCTCCTGTGGTGCATTTGCTAAGGAACTG...GGCTGGGAGTACCAGGAGCCTGAGTTGTCCTGCTCCAAGCCTAAACCTCCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| 3UTR-3UTR GCA 90 bp | TCCTGGTACTCCCAGCCCAAGCTAGGCAGGTTAAGGAAGAAGAGGGCTAGAGAGCAGTTCCTTAGCAAATaGACCACAGGAGGGTTGAGG | + |
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Preference number: 2 (lower is better) Translates to: SWYSQPKLGRLRKKRAREQFLSK*TTGGLR Trigger: CCTCAACCCTCCTGTGGTGCATTTGCTAAGGAACTG...CTCTCTAGCCCTCTTCTTCCTTAACCTGCCTAGCTTGGGCTGGGAGTACCAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| 3UTR-3UTR GCA 90 bp | GACAACTCAGGCTCCTGGTACTCCCAGCCCAAGCTAGGCAGGTTAAGGAAGAAGCAGTTCCTTAGCAAATaGACCACAGGAGGGTTGAGG | + |
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Preference number: 2 (lower is better) Translates to: DNSGSWYSQPKLGRLRKKQFLSK*TTGGLR Trigger: CCTCAACCCTCCTGTGGTGCATTTGCTAAGGAACTG...CTTCTTCCTTAACCTGCCTAGCTTGGGCTGGGAGTACCAGGAGCCTGAGTTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| 3UTR CCA 72 bp | GGAGGTTTAGGCTTGGAGCAGGACAACTCAGGCTCCTaGTACTCCCAGCCCAAGCTAGGCAGGTTAAGGAAG | + |
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Preference number: 3 (lower is better) Translates to: GGLGLEQDNSGS*YSQPKLGRLRK Trigger: CTTCCTTAACCTGCCTAGCTTGGGCTGGGAGTACCAGGAGCCTGAGTTGTCCTGCTCCAAGCCTAAACCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| 3UTR-3UTR CAA 90 bp | CTGGAAGCTCCAATAAGAGTCTGCAAAGTTGGCAGCCCAGGAGGCTGGTGCAGAGAAGGAGGTTTAGGCTaGGAGCAGGACAACTCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: LEAPIRVCKVGSPGGWCREGGLG*EQDNSG Trigger: GCCTGAGTTGTCCTGCTCCAAGCCTAAACCTCCTTC...TCTGCACCAGCCTCCTGGGCTGCCAACTTTGCAGACTCTTATTGGAGCTTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| 3UTR-3UTR CAA 90 bp | CTGGAAGCTCCAATAAGAGTCTGCAAAGTTGGCAGCCCAGGAGGCTGGTGCAGAAGAGGGCTAGAGAGTTaGCTCAGTTCCTTAGCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: LEAPIRVCKVGSPGGWCRRGLES*LSSLAN Trigger: ATTTGCTAAGGAACTGAGCAAACTCTCTAGCCCTCT...TCTGCACCAGCCTCCTGGGCTGCCAACTTTGCAGACTCTTATTGGAGCTTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR TCA 90 bp | GGAAGGAGGTTTAGGCTTGGAGCAGGACAACTCAGGCTCCTGGTACTCCCAGCCAGAAAGTGTGGTGGCTaGAGTCTCCCGGCTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GRRFRLGAGQLRLLVLPARKCGG*SLPAAR Trigger: CCTGGCAGCCGGGAGACTTCAGCCACCACACTTTCT...GGCTGGGAGTACCAGGAGCCTGAGTTGTCCTGCTCCAAGCCTAAACCTCCTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR GCA 90 bp | GGAAGGAGGTTTAGGCTTGGAGCAGGACAACTCAGGCTCCTGGTACTCCCAGCCCCTCACTCAGGATGCTaGCGACTGCACAGCGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: GRRFRLGAGQLRLLVLPAPHSGC*RLHSGT Trigger: AGTGCCGCTGTGCAGTCGGCAGCATCCTGAGTGAGG...GGCTGGGAGTACCAGGAGCCTGAGTTGTCCTGCTCCAAGCCTAAACCTCCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR CCA 90 bp | GGTTTAGGCTTGGAGCAGGACAACTCAGGCTCCTGGTACTCCCAGCCCAAGCTAGTATCCAAGGCAGGATaGACTCGGCGGGCAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLGLEQDNSGSWYSQPKLVSKAG*TRRAAS Trigger: GCTGGCTGCCCGCCGAGTCCATCCTGCCTTGGATAC...TAGCTTGGGCTGGGAGTACCAGGAGCCTGAGTTGTCCTGCTCCAAGCCTAAACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR CCA 90 bp | TTGGAGCAGGACAACTCAGGCTCCTGGTACTCCCAGCCCAAGCTAGGCAGGTTAGTATCCAAGGCAGGATaGACTCGGCGGGCAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LEQDNSGSWYSQPKLGRLVSKAG*TRRAAS Trigger: GCTGGCTGCCCGCCGAGTCCATCCTGCCTTGGATAC...TAACCTGCCTAGCTTGGGCTGGGAGTACCAGGAGCCTGAGTTGTCCTGCTCCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR TCA 90 bp | GACAACTCAGGCTCCTGGTACTCCCAGCCCAAGCTAGGCAGGTTAAGGAAGAAGATCTCCAGGCGAGGGTaGGCACACAGCTTCCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DNSGSWYSQPKLGRLRKKISRRG*AHSFRS Trigger: GGAGCGGAAGCTGTGTGCTCACCCTCGCCTGGAGAT...CTTCTTCCTTAACCTGCCTAGCTTGGGCTGGGAGTACCAGGAGCCTGAGTTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR TCA 90 bp | TCCTGGTACTCCCAGCCCAAGCTAGGCAGGTTAAGGAAGAAGAGGGCTAGAGAGATCTCCAGGCGAGGGTaGGCACACAGCTTCCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: SWYSQPKLGRLRKKRAREISRRG*AHSFRS Trigger: GGAGCGGAAGCTGTGTGCTCACCCTCGCCTGGAGAT...CTCTCTAGCCCTCTTCTTCCTTAACCTGCCTAGCTTGGGCTGGGAGTACCAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR TCA 90 bp | GGTTTAGGCTTGGAGCAGGACAACTCAGGCTCCTGGTACTCCCAGCCCAAGCTAAGAAAGTGTGGTGGCTaGAGTCTCCCGGCTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLGLEQDNSGSWYSQPKLRKCGG*SLPAAR Trigger: CCTGGCAGCCGGGAGACTTCAGCCACCACACTTTCT...TAGCTTGGGCTGGGAGTACCAGGAGCCTGAGTTGTCCTGCTCCAAGCCTAAACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR GCA 90 bp | TTGGAGCAGGACAACTCAGGCTCCTGGTACTCCCAGCCCAAGCTAGGCAGGTTACCAGCCACGGTTGCCTaGCCCAGGAGAAAGTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LEQDNSGSWYSQPKLGRLPATVA*PRRKCG Trigger: ACCACACTTTCTCCTGGGGCAGGCAACCGTGGCTGG...TAACCTGCCTAGCTTGGGCTGGGAGTACCAGGAGCCTGAGTTGTCCTGCTCCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR GCA 90 bp | GGTTTAGGCTTGGAGCAGGACAACTCAGGCTCCTGGTACTCCCAGCCCAAGCTACCAGCCACGGTTGCCTaGCCCAGGAGAAAGTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GLGLEQDNSGSWYSQPKLPATVA*PRRKCG Trigger: ACCACACTTTCTCCTGGGGCAGGCAACCGTGGCTGG...TAGCTTGGGCTGGGAGTACCAGGAGCCTGAGTTGTCCTGCTCCAAGCCTAAACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR GCA 90 bp | TCCTGGTACTCCCAGCCCAAGCTAGGCAGGTTAAGGAAGAAGAGGGCTAGAGAGCGTCCCAGCCACGGTTaGCTGCCCCAGGAGAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SWYSQPKLGRLRKKRARERPSHG*LPQEKV Trigger: CACTTTCTCCTGGGGCAGGCAACCGTGGCTGGGACG...CTCTCTAGCCCTCTTCTTCCTTAACCTGCCTAGCTTGGGCTGGGAGTACCAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR GCA 90 bp | CTGGAAGCTCCAATAAGAGTCTGCAAAGTTGGCAGCCCAGGAGGCTGGTGCAGACGTCCCAGCCACGGTTaGCTGCCCCAGGAGAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LEAPIRVCKVGSPGGWCRRPSHG*LPQEKV Trigger: CACTTTCTCCTGGGGCAGGCAACCGTGGCTGGGACG...TCTGCACCAGCCTCCTGGGCTGCCAACTTTGCAGACTCTTATTGGAGCTTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR CCA 90 bp | CTGGAAGCTCCAATAAGAGTCTGCAAAGTTGGCAGCCCAGGAGGCTGGTGCAGACCTGTGCCATCCGTCTaGGTGTCAGTGGCCTCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LEAPIRVCKVGSPGGWCRPVPSV*VSVASA Trigger: TGCGGAGGCCACTGACACCCAGACGGATGGCACAGG...TCTGCACCAGCCTCCTGGGCTGCCAACTTTGCAGACTCTTATTGGAGCTTCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR CCA 90 bp | GGAAGGAGGTTTAGGCTTGGAGCAGGACAACTCAGGCTCCTGGTACTCCCAGCCCAGGAGAAAGTGTGGTaGCTGAAGTCTCCCGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GRRFRLGAGQLRLLVLPAQEKVW*LKSPGC Trigger: GCAGCCGGGAGACTTCAGCCACCACACTTTCTCCTG...GGCTGGGAGTACCAGGAGCCTGAGTTGTCCTGCTCCAAGCCTAAACCTCCTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR GCA 90 bp | CTGGAAGCTCCAATAAGAGTCTGCAAAGTTGGCAGCCCAGGAGGCTGGTGCAGACAGGATGCTGCCGACTaGACAGCGGCACTTCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LEAPIRVCKVGSPGGWCRQDAAD*TAALLR Trigger: CCTGAGAAGTGCCGCTGTGCAGTCGGCAGCATCCTG...TCTGCACCAGCCTCCTGGGCTGCCAACTTTGCAGACTCTTATTGGAGCTTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR GCA 90 bp | TCCTGGTACTCCCAGCCCAAGCTAGGCAGGTTAAGGAAGAAGAGGGCTAGAGAGCAGGATGCTGCCGACTaGACAGCGGCACTTCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SWYSQPKLGRLRKKRAREQDAAD*TAALLR Trigger: CCTGAGAAGTGCCGCTGTGCAGTCGGCAGCATCCTG...CTCTCTAGCCCTCTTCTTCCTTAACCTGCCTAGCTTGGGCTGGGAGTACCAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR GCA 90 bp | CTGGAAGCTCCAATAAGAGTCTGCAAAGTTGGCAGCCCAGGAGGCTGGTGCAGATGTAGCTGTGCTCGCTaGGGTTGTCACCGTCGTCCC | + |
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Preference number: 4 (lower is better) Translates to: LEAPIRVCKVGSPGGWCRCSCAR*GCHRRP Trigger: GGGACGACGGTGACAACCGCAGCGAGCACAGCTACA...TCTGCACCAGCCTCCTGGGCTGCCAACTTTGCAGACTCTTATTGGAGCTTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR CCA 90 bp | GGCTCCTGGTACTCCCAGCCCAAGCTAGGCAGGTTAAGGAAGAAGAGGGCTAGACAGGAGAAAGTGTGGTaGCTGAAGTCTCCCGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: GSWYSQPKLGRLRKKRARQEKVW*LKSPGC Trigger: GCAGCCGGGAGACTTCAGCCACCACACTTTCTCCTG...TCTAGCCCTCTTCTTCCTTAACCTGCCTAGCTTGGGCTGGGAGTACCAGGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR TCA 90 bp | AAGGGCAGTGAGGAAGGAGGTTTAGGCTTGGAGCAGGACAACTCAGGCTCCTGGTGCTGCAGCTCTCTGTaGAAAGGTGCCCAGTGTCAC | + |
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Preference number: 4 (lower is better) Translates to: KGSEEGGLGLEQDNSGSWCCSSL*KGAQCH Trigger: GTGACACTGGGCACCTTTTCACAGAGAGCTGCAGCA...CCAGGAGCCTGAGTTGTCCTGCTCCAAGCCTAAACCTCCTTCCTCACTGCCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR TCA 90 bp | TGGTACTCCCAGCCCAAGCTAGGCAGGTTAAGGAAGAAGAGGGCTAGAGAGTTTATCTCCAGGCGAGGGTaGGCACACAGCTTCCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: WYSQPKLGRLRKKRAREFISRRG*AHSFRS Trigger: GGAGCGGAAGCTGTGTGCTCACCCTCGCCTGGAGAT...AAACTCTCTAGCCCTCTTCTTCCTTAACCTGCCTAGCTTGGGCTGGGAGTACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR CCA 90 bp | AAGGGCAGTGAGGAAGGAGGTTTAGGCTTGGAGCAGGACAACTCAGGCTCCTGGCCAGCCAGATGGATATaGGGGTGGTGTAAGGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: KGSEEGGLGLEQDNSGSWPARWI*GWCKGR Trigger: CCTTCCCTTACACCACCCCCATATCCATCTGGCTGG...CCAGGAGCCTGAGTTGTCCTGCTCCAAGCCTAAACCTCCTTCCTCACTGCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR CCA 90 bp | TGGTACTCCCAGCCCAAGCTAGGCAGGTTAAGGAAGAAGAGGGCTAGAGAGTTTGGGGCCCCAGAAGCTTaGCTTCAGGGTTCAGTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: WYSQPKLGRLRKKRAREFGAPEA*LQGSVG Trigger: CCCGACTGAACCCTGAAGCCAAGCTTCTGGGGCCCC...AAACTCTCTAGCCCTCTTCTTCCTTAACCTGCCTAGCTTGGGCTGGGAGTACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR GCA 90 bp | TGGTACTCCCAGCCCAAGCTAGGCAGGTTAAGGAAGAAGAGGGCTAGAGAGTTTCAGGATGCTGCCGACTaGACAGCGGCACTTCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WYSQPKLGRLRKKRAREFQDAAD*TAALLR Trigger: CCTGAGAAGTGCCGCTGTGCAGTCGGCAGCATCCTG...AAACTCTCTAGCCCTCTTCTTCCTTAACCTGCCTAGCTTGGGCTGGGAGTACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR GCA 90 bp | TTGGAGCAGGACAACTCAGGCTCCTGGTACTCCCAGCCCAAGCTAGGCAGGTTATTGTATCAGCTCCTGTaGCATCCGTCTGGGTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: LEQDNSGSWYSQPKLGRLLYQLL*HPSGCQ Trigger: CTGACACCCAGACGGATGGCACAGGAGCTGATACAA...TAACCTGCCTAGCTTGGGCTGGGAGTACCAGGAGCCTGAGTTGTCCTGCTCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR GCA 90 bp | TGGTACTCCCAGCCCAAGCTAGGCAGGTTAAGGAAGAAGAGGGCTAGAGAGTTTCCAGCCACGGTTGCCTaGCCCAGGAGAAAGTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: WYSQPKLGRLRKKRAREFPATVA*PRRKCG Trigger: ACCACACTTTCTCCTGGGGCAGGCAACCGTGGCTGG...AAACTCTCTAGCCCTCTTCTTCCTTAACCTGCCTAGCTTGGGCTGGGAGTACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR CCA 90 bp | TTGGAGCAGGACAACTCAGGCTCCTGGTACTCCCAGCCCAAGCTAGGCAGGTTAGTAGCTATGACCACATaGCTAGGTGCTGGGAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LEQDNSGSWYSQPKLGRLVAMTT*LGAGKE Trigger: CTCCTTCCCAGCACCTAGCCATGTGGTCATAGCTAC...TAACCTGCCTAGCTTGGGCTGGGAGTACCAGGAGCCTGAGTTGTCCTGCTCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR CCA 90 bp | GACAACTCAGGCTCCTGGTACTCCCAGCCCAAGCTAGGCAGGTTAAGGAAGAAGCCAGCCAGATGGATATaGGGGTGGTGTAAGGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: DNSGSWYSQPKLGRLRKKPARWI*GWCKGR Trigger: CCTTCCCTTACACCACCCCCATATCCATCTGGCTGG...CTTCTTCCTTAACCTGCCTAGCTTGGGCTGGGAGTACCAGGAGCCTGAGTTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR TCA 90 bp | CTGGAAGCTCCAATAAGAGTCTGCAAAGTTGGCAGCCCAGGAGGCTGGTGCAGATCTGATAGAGGTGGATaGGCTCAGGTGAAGGCGACT | + |
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Preference number: 4 (lower is better) Translates to: LEAPIRVCKVGSPGGWCRSDRGG*AQVKAT Trigger: AGTCGCCTTCACCTGAGCTCATCCACCTCTATCAGA...TCTGCACCAGCCTCCTGGGCTGCCAACTTTGCAGACTCTTATTGGAGCTTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR TCA 90 bp | GACAACTCAGGCTCCTGGTACTCCCAGCCCAAGCTAGGCAGGTTAAGGAAGAAGTCTGATAGAGGTGGATaGGCTCAGGTGAAGGCGACT | + |
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Preference number: 4 (lower is better) Translates to: DNSGSWYSQPKLGRLRKKSDRGG*AQVKAT Trigger: AGTCGCCTTCACCTGAGCTCATCCACCTCTATCAGA...CTTCTTCCTTAACCTGCCTAGCTTGGGCTGGGAGTACCAGGAGCCTGAGTTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR GCA 90 bp | GACAACTCAGGCTCCTGGTACTCCCAGCCCAAGCTAGGCAGGTTAAGGAAGAAGTTGTATCAGCTCCTGTaGCATCCGTCTGGGTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: DNSGSWYSQPKLGRLRKKLYQLL*HPSGCQ Trigger: CTGACACCCAGACGGATGGCACAGGAGCTGATACAA...CTTCTTCCTTAACCTGCCTAGCTTGGGCTGGGAGTACCAGGAGCCTGAGTTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR GCA 90 bp | CTGGAAGCTCCAATAAGAGTCTGCAAAGTTGGCAGCCCAGGAGGCTGGTGCAGATTGTATCAGCTCCTGTaGCATCCGTCTGGGTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: LEAPIRVCKVGSPGGWCRLYQLL*HPSGCQ Trigger: CTGACACCCAGACGGATGGCACAGGAGCTGATACAA...TCTGCACCAGCCTCCTGGGCTGCCAACTTTGCAGACTCTTATTGGAGCTTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR GCA 90 bp | AAGCTAGGCAGGTTAAGGAAGAAGAGGGCTAGAGAGTTTGCTCAGTTCCTTAGCCGTCCCAGCCACGGTTaGCTGCCCCAGGAGAAAGTG | + |
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Preference number: 4 (lower is better) Translates to: KLGRLRKKRAREFAQFLSRPSHG*LPQEKV Trigger: CACTTTCTCCTGGGGCAGGCAACCGTGGCTGGGACG...GCTAAGGAACTGAGCAAACTCTCTAGCCCTCTTCTTCCTTAACCTGCCTAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR CCA 90 bp | GGCTCCTGGTACTCCCAGCCCAAGCTAGGCAGGTTAAGGAAGAAGAGGGCTAGACATAGTAGACAGCGATaGAACGGAGCTTGGGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: GSWYSQPKLGRLRKKRARHSRQR*NGAWER Trigger: TCTCTCCCAAGCTCCGTTCCATCGCTGTCTACTATG...TCTAGCCCTCTTCTTCCTTAACCTGCCTAGCTTGGGCTGGGAGTACCAGGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR CCA 90 bp | AAGGGCAGTGAGGAAGGAGGTTTAGGCTTGGAGCAGGACAACTCAGGCTCCTGGCATAGTAGACAGCGATaGAACGGAGCTTGGGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: KGSEEGGLGLEQDNSGSWHSRQR*NGAWER Trigger: TCTCTCCCAAGCTCCGTTCCATCGCTGTCTACTATG...CCAGGAGCCTGAGTTGTCCTGCTCCAAGCCTAAACCTCCTTCCTCACTGCCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR CCA 90 bp | CTGGAAGCTCCAATAAGAGTCTGCAAAGTTGGCAGCCCAGGAGGCTGGTGCAGAGTAGCTATGACCACATaGCTAGGTGCTGGGAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LEAPIRVCKVGSPGGWCRVAMTT*LGAGKE Trigger: CTCCTTCCCAGCACCTAGCCATGTGGTCATAGCTAC...TCTGCACCAGCCTCCTGGGCTGCCAACTTTGCAGACTCTTATTGGAGCTTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR CCA 90 bp | GGAAGGAGGTTTAGGCTTGGAGCAGGACAACTCAGGCTCCTGGTACTCCCAGCCTCCTTGCCTTGCCAGTaGGCACATGAAATGGATCTT | + |
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Preference number: 4 (lower is better) Translates to: GRRFRLGAGQLRLLVLPASLPCQ*AHEMDL Trigger: AAGATCCATTTCATGTGCCCACTGGCAAGGCAAGGA...GGCTGGGAGTACCAGGAGCCTGAGTTGTCCTGCTCCAAGCCTAAACCTCCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR CCA 90 bp | AAGCTAGGCAGGTTAAGGAAGAAGAGGGCTAGAGAGTTTGCTCAGTTCCTTAGCCCTGTGCCATCCGTCTaGGTGTCAGTGGCCTCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: KLGRLRKKRAREFAQFLSPVPSV*VSVASA Trigger: TGCGGAGGCCACTGACACCCAGACGGATGGCACAGG...GCTAAGGAACTGAGCAAACTCTCTAGCCCTCTTCTTCCTTAACCTGCCTAGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
||
| CDS-3UTR CCA 90 bp | TCCTGGTACTCCCAGCCCAAGCTAGGCAGGTTAAGGAAGAAGAGGGCTAGAGAGCAAAGGATGAGCCACTaGCACCCGATTCACTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SWYSQPKLGRLRKKRAREQRMSH*HPIHCS Trigger: GCTACAGTGAATCGGGTGCCAGTGGCTCATCCTTTG...CTCTCTAGCCCTCTTCTTCCTTAACCTGCCTAGCTTGGGCTGGGAGTACCAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
||
| CDS-3UTR CCA 90 bp | GACAACTCAGGCTCCTGGTACTCCCAGCCCAAGCTAGGCAGGTTAAGGAAGAAGCAAAGGATGAGCCACTaGCACCCGATTCACTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: DNSGSWYSQPKLGRLRKKQRMSH*HPIHCS Trigger: GCTACAGTGAATCGGGTGCCAGTGGCTCATCCTTTG...CTTCTTCCTTAACCTGCCTAGCTTGGGCTGGGAGTACCAGGAGCCTGAGTTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
||
| CDS-3UTR CCA 90 bp | AAGCTAGGCAGGTTAAGGAAGAAGAGGGCTAGAGAGTTTGCTCAGTTCCTTAGCGGGGCCCCAGAAGCTTaGCTTCAGGGTTCAGTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: KLGRLRKKRAREFAQFLSGAPEA*LQGSVG Trigger: CCCGACTGAACCCTGAAGCCAAGCTTCTGGGGCCCC...GCTAAGGAACTGAGCAAACTCTCTAGCCCTCTTCTTCCTTAACCTGCCTAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR TCA 90 bp | AAGCTAGGCAGGTTAAGGAAGAAGAGGGCTAGAGAGTTTGCTCAGTTCCTTAGCAGAAAGTGTGGTGGCTaGAGTCTCCCGGCTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KLGRLRKKRAREFAQFLSRKCGG*SLPAAR Trigger: CCTGGCAGCCGGGAGACTTCAGCCACCACACTTTCT...GCTAAGGAACTGAGCAAACTCTCTAGCCCTCTTCTTCCTTAACCTGCCTAGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
||
| CDS-3UTR GCA 90 bp | AAGCTAGGCAGGTTAAGGAAGAAGAGGGCTAGAGAGTTTGCTCAGTTCCTTAGCCCTCACTCAGGATGCTaGCGACTGCACAGCGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: KLGRLRKKRAREFAQFLSPHSGC*RLHSGT Trigger: AGTGCCGCTGTGCAGTCGGCAGCATCCTGAGTGAGG...GCTAAGGAACTGAGCAAACTCTCTAGCCCTCTTCTTCCTTAACCTGCCTAGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
||
| CDS-3UTR GCA 90 bp | TTGGAGCAGGACAACTCAGGCTCCTGGTACTCCCAGCCCAAGCTAGGCAGGTTAGACCACATGGCTAGGTaGTGGGAAGGAGAATATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LEQDNSGSWYSQPKLGRLDHMAR*WEGEYL Trigger: AAGATATTCTCCTTCCCAGCACCTAGCCATGTGGTC...TAACCTGCCTAGCTTGGGCTGGGAGTACCAGGAGCCTGAGTTGTCCTGCTCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
||
| CDS-3UTR GCA 90 bp | GGCTCCTGGTACTCCCAGCCCAAGCTAGGCAGGTTAAGGAAGAAGAGGGCTAGAGACCACATGGCTAGGTaGTGGGAAGGAGAATATCTT | + |
|
Preference number: 4 (lower is better) Translates to: GSWYSQPKLGRLRKKRARDHMAR*WEGEYL Trigger: AAGATATTCTCCTTCCCAGCACCTAGCCATGTGGTC...TCTAGCCCTCTTCTTCCTTAACCTGCCTAGCTTGGGCTGGGAGTACCAGGAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
||
| CDS-3UTR GCA 90 bp | AAGGGCAGTGAGGAAGGAGGTTTAGGCTTGGAGCAGGACAACTCAGGCTCCTGGGACCACATGGCTAGGTaGTGGGAAGGAGAATATCTT | + |
|
Preference number: 4 (lower is better) Translates to: KGSEEGGLGLEQDNSGSWDHMAR*WEGEYL Trigger: AAGATATTCTCCTTCCCAGCACCTAGCCATGTGGTC...CCAGGAGCCTGAGTTGTCCTGCTCCAAGCCTAAACCTCCTTCCTCACTGCCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
||
| CDS-3UTR GCA 90 bp | AAGGGCAGTGAGGAAGGAGGTTTAGGCTTGGAGCAGGACAACTCAGGCTCCTGGCAGGCTCACAGAACTTaGATCACTTGTATCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KGSEEGGLGLEQDNSGSWQAHRT*ITCISS Trigger: GGAGCTGATACAAGTGATGCAAGTTCTGTGAGCCTG...CCAGGAGCCTGAGTTGTCCTGCTCCAAGCCTAAACCTCCTTCCTCACTGCCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
||
| CDS-3UTR GCA 90 bp | AAGCTAGGCAGGTTAAGGAAGAAGAGGGCTAGAGAGTTTGCTCAGTTCCTTAGCTGTAGCTGTGCTCGCTaGGGTTGTCACCGTCGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KLGRLRKKRAREFAQFLSCSCAR*GCHRRP Trigger: GGGACGACGGTGACAACCGCAGCGAGCACAGCTACA...GCTAAGGAACTGAGCAAACTCTCTAGCCCTCTTCTTCCTTAACCTGCCTAGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
||
| CDS-3UTR CCA 90 bp | TTGGAGCAGGACAACTCAGGCTCCTGGTACTCCCAGCCCAAGCTAGGCAGGTTATGTCTCCTTCACCTCTaGCACGTAGAAATCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LEQDNSGSWYSQPKLGRLCLLHL*HVEISL Trigger: CAAGGAGATTTCTACGTGCCAGAGGTGAAGGAGACA...TAACCTGCCTAGCTTGGGCTGGGAGTACCAGGAGCCTGAGTTGTCCTGCTCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
||
| CDS-3UTR GCA 90 bp | TCCTGGTACTCCCAGCCCAAGCTAGGCAGGTTAAGGAAGAAGAGGGCTAGAGAGCAGGCTCACAGAACTTaGATCACTTGTATCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SWYSQPKLGRLRKKRAREQAHRT*ITCISS Trigger: GGAGCTGATACAAGTGATGCAAGTTCTGTGAGCCTG...CTCTCTAGCCCTCTTCTTCCTTAACCTGCCTAGCTTGGGCTGGGAGTACCAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
||
| CDS-3UTR CCA 90 bp | CTGGAAGCTCCAATAAGAGTCTGCAAAGTTGGCAGCCCAGGAGGCTGGTGCAGATCCTTGCCTTGCCAGTaGGCACATGAAATGGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LEAPIRVCKVGSPGGWCRSLPCQ*AHEMDL Trigger: AAGATCCATTTCATGTGCCCACTGGCAAGGCAAGGA...TCTGCACCAGCCTCCTGGGCTGCCAACTTTGCAGACTCTTATTGGAGCTTCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR CCA 90 bp | TCCTGGTACTCCCAGCCCAAGCTAGGCAGGTTAAGGAAGAAGAGGGCTAGAGAGTGTCTCCTTCACCTCTaGCACGTAGAAATCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SWYSQPKLGRLRKKRARECLLHL*HVEISL Trigger: CAAGGAGATTTCTACGTGCCAGAGGTGAAGGAGACA...CTCTCTAGCCCTCTTCTTCCTTAACCTGCCTAGCTTGGGCTGGGAGTACCAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
||
| CDS-3UTR TCA 90 bp | AAGCTAGGCAGGTTAAGGAAGAAGAGGGCTAGAGAGTTTGCTCAGTTCCTTAGCTGCTGCAGCTCTCTGTaGAAAGGTGCCCAGTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KLGRLRKKRAREFAQFLSCCSSL*KGAQCH Trigger: GTGACACTGGGCACCTTTTCACAGAGAGCTGCAGCA...GCTAAGGAACTGAGCAAACTCTCTAGCCCTCTTCTTCCTTAACCTGCCTAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR CCA 90 bp | TGGTACTCCCAGCCCAAGCTAGGCAGGTTAAGGAAGAAGAGGGCTAGAGAGTTTCATAGTAGACAGCGATaGAACGGAGCTTGGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: WYSQPKLGRLRKKRAREFHSRQR*NGAWER Trigger: TCTCTCCCAAGCTCCGTTCCATCGCTGTCTACTATG...AAACTCTCTAGCCCTCTTCTTCCTTAACCTGCCTAGCTTGGGCTGGGAGTACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
||
| CDS-3UTR CCA 90 bp | AAGCTAGGCAGGTTAAGGAAGAAGAGGGCTAGAGAGTTTGCTCAGTTCCTTAGCCCAGCCAGATGGATATaGGGGTGGTGTAAGGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KLGRLRKKRAREFAQFLSPARWI*GWCKGR Trigger: CCTTCCCTTACACCACCCCCATATCCATCTGGCTGG...GCTAAGGAACTGAGCAAACTCTCTAGCCCTCTTCTTCCTTAACCTGCCTAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR TCA 90 bp | AAGCTAGGCAGGTTAAGGAAGAAGAGGGCTAGAGAGTTTGCTCAGTTCCTTAGCTCTGATAGAGGTGGATaGGCTCAGGTGAAGGCGACT | + |
|
Preference number: 4 (lower is better) Translates to: KLGRLRKKRAREFAQFLSSDRGG*AQVKAT Trigger: AGTCGCCTTCACCTGAGCTCATCCACCTCTATCAGA...GCTAAGGAACTGAGCAAACTCTCTAGCCCTCTTCTTCCTTAACCTGCCTAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR CCA 90 bp | TGGTACTCCCAGCCCAAGCTAGGCAGGTTAAGGAAGAAGAGGGCTAGAGAGTTTTCCTTGCCTTGCCAGTaGGCACATGAAATGGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: WYSQPKLGRLRKKRAREFSLPCQ*AHEMDL Trigger: AAGATCCATTTCATGTGCCCACTGGCAAGGCAAGGA...AAACTCTCTAGCCCTCTTCTTCCTTAACCTGCCTAGCTTGGGCTGGGAGTACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR CCA 90 bp | TGGTACTCCCAGCCCAAGCTAGGCAGGTTAAGGAAGAAGAGGGCTAGAGAGTTTTGTCTCCTTCACCTCTaGCACGTAGAAATCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: WYSQPKLGRLRKKRAREFCLLHL*HVEISL Trigger: CAAGGAGATTTCTACGTGCCAGAGGTGAAGGAGACA...AAACTCTCTAGCCCTCTTCTTCCTTAACCTGCCTAGCTTGGGCTGGGAGTACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR CCA 90 bp | AAGCTAGGCAGGTTAAGGAAGAAGAGGGCTAGAGAGTTTGCTCAGTTCCTTAGCCAAAGGATGAGCCACTaGCACCCGATTCACTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: KLGRLRKKRAREFAQFLSQRMSH*HPIHCS Trigger: GCTACAGTGAATCGGGTGCCAGTGGCTCATCCTTTG...GCTAAGGAACTGAGCAAACTCTCTAGCCCTCTTCTTCCTTAACCTGCCTAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS GCA 90 bp | CAAAGGATGAGCCACTGGCACCCGATTCACTGTAGCTGTGCTCGCTaGGGTTGTCACCGTCGTCCCAGCCACGGTTGCCTGCCCCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QRMSHWHPIHCSCAR*GCHRRPSHGCLPQE Trigger: CTCCTGGGGCAGGCAACCGTGGCTGGGACGACGGTGACAACCGCAGCGAGCACAGCTACAGTGAATCGGGTGCCAGTGGCTCATCCTTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR CAA 90 bp | AAGGGCAGTGAGGAAGGAGGTTTAGGCTTGGAGCAGGACAACTCAGGCTCCTGGCTGTGCTCGCTGCGGTaGTCACCGTCGTCCCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KGSEEGGLGLEQDNSGSWLCSLR*SPSSQP Trigger: TGGCTGGGACGACGGTGACAACCGCAGCGAGCACAG...CCAGGAGCCTGAGTTGTCCTGCTCCAAGCCTAAACCTCCTTCCTCACTGCCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR CAA 90 bp | GGTTTAGGCTTGGAGCAGGACAACTCAGGCTCCTGGTACTCCCAGCCCAAGCTACTGTGCTCGCTGCGGTaGTCACCGTCGTCCCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GLGLEQDNSGSWYSQPKLLCSLR*SPSSQP Trigger: TGGCTGGGACGACGGTGACAACCGCAGCGAGCACAG...TAGCTTGGGCTGGGAGTACCAGGAGCCTGAGTTGTCCTGCTCCAAGCCTAAACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR CAA 90 bp | AAGGGCAGTGAGGAAGGAGGTTTAGGCTTGGAGCAGGACAACTCAGGCTCCTGGTCGTCCCAGCCACGGTaGCCTGCCCCAGGAGAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: KGSEEGGLGLEQDNSGSWSSQPR*PAPGES Trigger: ACTTTCTCCTGGGGCAGGCAACCGTGGCTGGGACGA...CCAGGAGCCTGAGTTGTCCTGCTCCAAGCCTAAACCTCCTTCCTCACTGCCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR CAA 90 bp | GGTTTAGGCTTGGAGCAGGACAACTCAGGCTCCTGGTACTCCCAGCCCAAGCTATCGTCCCAGCCACGGTaGCCTGCCCCAGGAGAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: GLGLEQDNSGSWYSQPKLSSQPR*PAPGES Trigger: ACTTTCTCCTGGGGCAGGCAACCGTGGCTGGGACGA...TAGCTTGGGCTGGGAGTACCAGGAGCCTGAGTTGTCCTGCTCCAAGCCTAAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS CCA 90 bp | TTGCATCACTTGTATCAGCTCCTGTGCCATCCGTCTGGGTGTCAGTaGCCTCCGCAAGCTCCCGGCATTTCCGCTCTGTCTCCTTCACCT | + |
|
Preference number: 5 (lower is better) Translates to: LHHLYQLLCHPSGCQ*PPQAPGISALSPSP Trigger: AGGTGAAGGAGACAGAGCGGAAATGCCGGGAGCTTGCGGAGGCCACTGACACCCAGACGGATGGCACAGGAGCTGATACAAGTGATGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS CCA 90 bp | CTCACAGAACTTGCATCACTTGTATCAGCTCCTGTGCCATCCGTCTaGGTGTCAGTGGCCTCCGCAAGCTCCCGGCATTTCCGCTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LTELASLVSAPVPSV*VSVASASSRHFRSV Trigger: GACAGAGCGGAAATGCCGGGAGCTTGCGGAGGCCACTGACACCCAGACGGATGGCACAGGAGCTGATACAAGTGATGCAAGTTCTGTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR CAA 90 bp | TGGTACTCCCAGCCCAAGCTAGGCAGGTTAAGGAAGAAGAGGGCTAGAGAGTTTTCGTCCCAGCCACGGTaGCCTGCCCCAGGAGAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: WYSQPKLGRLRKKRAREFSSQPR*PAPGES Trigger: ACTTTCTCCTGGGGCAGGCAACCGTGGCTGGGACGA...AAACTCTCTAGCCCTCTTCTTCCTTAACCTGCCTAGCTTGGGCTGGGAGTACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR CAA 90 bp | AAGCTAGGCAGGTTAAGGAAGAAGAGGGCTAGAGAGTTTGCTCAGTTCCTTAGCCTGTGCTCGCTGCGGTaGTCACCGTCGTCCCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KLGRLRKKRAREFAQFLSLCSLR*SPSSQP Trigger: TGGCTGGGACGACGGTGACAACCGCAGCGAGCACAG...GCTAAGGAACTGAGCAAACTCTCTAGCCCTCTTCTTCCTTAACCTGCCTAGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR CAA 90 bp | GGTTTAGGCTTGGAGCAGGACAACTCAGGCTCCTGGTACTCCCAGCCCAAGCTACCAGGCTCACAGAACTaGCATCACTTGTATCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GLGLEQDNSGSWYSQPKLPGSQN*HHLYQL Trigger: GAGCTGATACAAGTGATGCAAGTTCTGTGAGCCTGG...TAGCTTGGGCTGGGAGTACCAGGAGCCTGAGTTGTCCTGCTCCAAGCCTAAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS-3UTR CAA 90 bp | TTGGAGCAGGACAACTCAGGCTCCTGGTACTCCCAGCCCAAGCTAGGCAGGTTAGAAATGGATCTTGTCTaGATGGTAGATCTCCAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LEQDNSGSWYSQPKLGRLEMDLV*MVDLQA Trigger: CGCCTGGAGATCTACCATCAAGACAAGATCCATTTC...TAACCTGCCTAGCTTGGGCTGGGAGTACCAGGAGCCTGAGTTGTCCTGCTCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
||
| CDS-3UTR CAA 90 bp | AAGGGCAGTGAGGAAGGAGGTTTAGGCTTGGAGCAGGACAACTCAGGCTCCTGGGAAATGGATCTTGTCTaGATGGTAGATCTCCAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: KGSEEGGLGLEQDNSGSWEMDLV*MVDLQA Trigger: CGCCTGGAGATCTACCATCAAGACAAGATCCATTTC...CCAGGAGCCTGAGTTGTCCTGCTCCAAGCCTAAACCTCCTTCCTCACTGCCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
||
| CDS-3UTR CAA 90 bp | GACAACTCAGGCTCCTGGTACTCCCAGCCCAAGCTAGGCAGGTTAAGGAAGAAGCCAGGCTCACAGAACTaGCATCACTTGTATCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: DNSGSWYSQPKLGRLRKKPGSQN*HHLYQL Trigger: GAGCTGATACAAGTGATGCAAGTTCTGTGAGCCTGG...CTTCTTCCTTAACCTGCCTAGCTTGGGCTGGGAGTACCAGGAGCCTGAGTTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS TCA 90 bp | TCACCTCTGGCACGTAGAAATCTCCTTGCCTTGCCAGTGGGCACATaGAATGGATCTTGTCTTGATGGTAGATCTCCAGGCGAGGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SPLARRNLLALPVGT*NGSCLDGRSPGEGE Trigger: CTCACCCTCGCCTGGAGATCTACCATCAAGACAAGATCCATTTCATGTGCCCACTGGCAAGGCAAGGAGATTTCTACGTGCCAGAGGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
||
| CDS-3UTR CAA 90 bp | TGGTACTCCCAGCCCAAGCTAGGCAGGTTAAGGAAGAAGAGGGCTAGAGAGTTTGAAATGGATCTTGTCTaGATGGTAGATCTCCAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: WYSQPKLGRLRKKRAREFEMDLV*MVDLQA Trigger: CGCCTGGAGATCTACCATCAAGACAAGATCCATTTC...AAACTCTCTAGCCCTCTTCTTCCTTAACCTGCCTAGCTTGGGCTGGGAGTACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
||
| CDS GCA 72 bp | AGGCGACTCCTCCCCCTCACTCAGGATGCTGCCGACTaGACAGCGGCACTTCTCAGGAGGCACCGTATGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RRLLPLTQDAAD*TAALLRRHRMG Trigger: CCCCATACGGTGCCTCCTGAGAAGTGCCGCTGTGCAGTCGGCAGCATCCTGAGTGAGGGGGAGGAGTCGCCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
||
| CDS GCA 72 bp | CAGGTGAAGGCGACTCCTCCCCCTCACTCAGGATGCTaGCGACTGCACAGCGGCACTTCTCAGGAGGCACCG | + |
|
Preference number: 6 (lower is better) Translates to: QVKATPPPHSGC*RLHSGTSQEAP Trigger: CGGTGCCTCCTGAGAAGTGCCGCTGTGCAGTCGGCAGCATCCTGAGTGAGGGGGAGGAGTCGCCTTCACCTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
||
| CDS GCA 72 bp | AGCCACTGGCACCCGATTCACTGTAGCTGTGCTCGCTaGGGTTGTCACCGTCGTCCCAGCCACGGTTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SHWHPIHCSCAR*GCHRRPSHGCL Trigger: CAGGCAACCGTGGCTGGGACGACGGTGACAACCGCAGCGAGCACAGCTACAGTGAATCGGGTGCCAGTGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
||
| CDS CAA 72 bp | TGCTCGCTGCGGTTGTCACCGTCGTCCCAGCCACGGTaGCCTGCCCCAGGAGAAAGTGTGGTGGCTGAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: CSLRLSPSSQPR*PAPGESVVAEV Trigger: GACTTCAGCCACCACACTTTCTCCTGGGGCAGGCAACCGTGGCTGGGACGACGGTGACAACCGCAGCGAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
||
| CDS CCA 72 bp | TTGTATCAGCTCCTGTGCCATCCGTCTGGGTGTCAGTaGCCTCCGCAAGCTCCCGGCATTTCCGCTCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LYQLLCHPSGCQ*PPQAPGISALS Trigger: AGACAGAGCGGAAATGCCGGGAGCTTGCGGAGGCCACTGACACCCAGACGGATGGCACAGGAGCTGATACAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
||
| CDS GCA 72 bp | AGGACCCCACGTGGAACTTGTAGGCCACAGTTATGTTaGGGATTGGGGGTGATCCAGCGCTCACTGTCACCC | + |
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Preference number: 6 (lower is better) Translates to: RTPRGTCRPQLC*GLGVIQRSLSP Trigger: GGGTGACAGTGAGCGCTGGATCACCCCCAATCCGCAACATAACTGTGGCCTACAAGTTCCACGTGGGGTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS GCA 72 bp | CCGGCTGCCAGGGCGAACATCCAGGCTCACAGAACTTaGATCACTTGTATCAGCTCCTGTGCCATCCGTCTG | + |
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Preference number: 6 (lower is better) Translates to: PAARANIQAHRT*ITCISSCAIRL Trigger: CAGACGGATGGCACAGGAGCTGATACAAGTGATGCAAGTTCTGTGAGCCTGGATGTTCGCCCTGGCAGCCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS CCA 72 bp | CTTGCATCACTTGTATCAGCTCCTGTGCCATCCGTCTaGGTGTCAGTGGCCTCCGCAAGCTCCCGGCATTTC | + |
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Preference number: 6 (lower is better) Translates to: LASLVSAPVPSV*VSVASASSRHF Trigger: GAAATGCCGGGAGCTTGCGGAGGCCACTGACACCCAGACGGATGGCACAGGAGCTGATACAAGTGATGCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS GCA 72 bp | GGCTCACAGAACTTGCATCACTTGTATCAGCTCCTGTaGCATCCGTCTGGGTGTCAGTGGCCTCCGCAAGCT | + |
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Preference number: 6 (lower is better) Translates to: GSQNLHHLYQLL*HPSGCQWPPQA Trigger: AGCTTGCGGAGGCCACTGACACCCAGACGGATGGCACAGGAGCTGATACAAGTGATGCAAGTTCTGTGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS CAA 72 bp | CCACGTGGAACTTGTAGGCCACAGTTATGTTGCGGATaGGGGGTGATCCAGCGCTCACTGTCACCCCAGTCA | + |
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Preference number: 6 (lower is better) Translates to: PRGTCRPQLCCG*GVIQRSLSPQS Trigger: TGACTGGGGTGACAGTGAGCGCTGGATCACCCCCAATCCGCAACATAACTGTGGCCTACAAGTTCCACGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS CAA 90 bp | GAAATCTCCTTGCCTTGCCAGTGGGCACATGAAATGGATCTTGTCTaGATGGTAGATCTCCAGGCGAGGGTGAGCACACAGCTTCCGCTC | + |
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Preference number: 6 (lower is better) Translates to: EISLPCQWAHEMDLV*MVDLQARVSTQLPL Trigger: GAGCGGAAGCTGTGTGCTCACCCTCGCCTGGAGATCTACCATCAAGACAAGATCCATTTCATGTGCCCACTGGCAAGGCAAGGAGATTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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| CDS CAA 90 bp | GCATTTCCGCTCTGTCTCCTTCACCTCTGGCACGTAGAAATCTCCTaGCCTTGCCAGTGGGCACATGAAATGGATCTTGTCTTGATGGTA | + |
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Preference number: 6 (lower is better) Translates to: AFPLCLLHLWHVEIS*PCQWAHEMDLVLMV Trigger: TACCATCAAGACAAGATCCATTTCATGTGCCCACTGGCAAGGCAAGGAGATTTCTACGTGCCAGAGGTGAAGGAGACAGAGCGGAAATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046735.11 ENSMUST00000163441.8 ENSMUST00000169068.8 |
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