Pregenerated sensors for TEX261 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000014748Ensembl transcript IDs: ENSMUST00000014892.8
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGTGGGGAACGAGGCTTCAGAACAGAGGGGAGGGAGACCTGGGCTaGCAGAAGACACCTTCCAGGCTCCCAGGCACGATTAGCCCAGAG | + |
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Preference number: 1 (lower is better) Translates to: GWGTRLQNRGEGDLG*QKTPSRLPGTISPE Trigger: CTCTGGGCTAATCGTGCCTGGGAGCCTGGAAGGTGTCTTCTGCCAGCCCAGGTCTCCCTCCCCTCTGTTCTGAAGCCTCGTTCCCCACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR CCA 90 bp | GAGGAGGGTGGGGAACGAGGCTTCAGAACAGAGGGGAGGGAGACCTaGGCTGGCAGAAGACACCTTCCAGGCTCCCAGGCACGATTAGCC | + |
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Preference number: 1 (lower is better) Translates to: EEGGERGFRTEGRET*AGRRHLPGSQARLA Trigger: GGCTAATCGTGCCTGGGAGCCTGGAAGGTGTCTTCTGCCAGCCCAGGTCTCCCTCCCCTCTGTTCTGAAGCCTCGTTCCCCACCCTCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR GCA 90 bp | GAGAACTTGCTGTCAGTTCCCCAGCTTCATACCAGCTTCCCTGCCTaGCCCATCCAACCAGACCCAACTCTGGGGAAGGGAGGGCTGGGG | + |
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Preference number: 1 (lower is better) Translates to: ENLLSVPQLHTSFPA*PIQPDPTLGKGGLG Trigger: CCCCAGCCCTCCCTTCCCCAGAGTTGGGTCTGGTTGGATGGGGCAGGCAGGGAAGCTGGTATGAAGCTGGGGAACTGACAGCAAGTTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR TCA 90 bp | CTTAGAAGACAGAGCTCACATCCCTCCAGGAGCCGGAAGCGCAGGTaGGTGTGGCCTGTGTGCTCTGAGCAGCAGCCTAGGCTGCCTAGA | + |
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Preference number: 1 (lower is better) Translates to: LRRQSSHPSRSRKRR*VWPVCSEQQPRLPR Trigger: TCTAGGCAGCCTAGGCTGCTGCTCAGAGCACACAGGCCACACTCACCTGCGCTTCCGGCTCCTGGAGGGATGTGAGCTCTGTCTTCTAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR GCA 90 bp | AGTGCCAACCCTCAGCTCCTCCCTACGGTCACCTGCCTGAGAACTTaGTGTCAGTTCCCCAGCTTCATACCAGCTTCCCTGCCTGCCCCA | + |
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Preference number: 1 (lower is better) Translates to: SANPQLLPTVTCLRT*CQFPSFIPASLPAP Trigger: TGGGGCAGGCAGGGAAGCTGGTATGAAGCTGGGGAACTGACAGCAAGTTCTCAGGCAGGTGACCGTAGGGAGGAGCTGAGGGTTGGCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR TCA 90 bp | TTCCTGGAAGTGCCAACCCTCAGCTCCTCCCTACGGTCACCTGCCTaGGAACTTGCTGTCAGTTCCCCAGCTTCATACCAGCTTCCCTGC | + |
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Preference number: 1 (lower is better) Translates to: FLEVPTLSSSLRSPA*ELAVSSPASYQLPC Trigger: GCAGGGAAGCTGGTATGAAGCTGGGGAACTGACAGCAAGTTCTCAGGCAGGTGACCGTAGGGAGGAGCTGAGGGTTGGCACTTCCAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR GCA 90 bp | ACTTTTCCTGGAAGTGCCAACCCTCAGCTCCTCCCTACGGTCACCTaGCTGAGAACTTGCTGTCAGTTCCCCAGCTTCATACCAGCTTCC | + |
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Preference number: 1 (lower is better) Translates to: TFPGSANPQLLPTVT*LRTCCQFPSFIPAS Trigger: GGAAGCTGGTATGAAGCTGGGGAACTGACAGCAAGTTCTCAGGCAGGTGACCGTAGGGAGGAGCTGAGGGTTGGCACTTCCAGGAAAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR CCA 90 bp | AGGCACTGCAAAGAGCAGGTAAACAGAGCAGACACTAAGCTCAAATaGTCTCTGTGCCCAGAAGGCAGCAGAACTGTGCTTGAGCTAGGA | + |
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Preference number: 1 (lower is better) Translates to: RHCKEQVNRADTKLK*SLCPEGSRTVLELG Trigger: TCCTAGCTCAAGCACAGTTCTGCTGCCTTCTGGGCACAGAGACCATTTGAGCTTAGTGTCTGCTCTGTTTACCTGCTCTTTGCAGTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR GCA 90 bp | AAAGAGCAGGTAAACAGAGCAGACACTAAGCTCAAATGGTCTCTGTaGCCAGAAGGCAGCAGAACTGTGCTTGAGCTAGGAAGTAGCTGG | + |
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Preference number: 1 (lower is better) Translates to: KEQVNRADTKLKWSL*PEGSRTVLELGSSW Trigger: CCAGCTACTTCCTAGCTCAAGCACAGTTCTGCTGCCTTCTGGGCACAGAGACCATTTGAGCTTAGTGTCTGCTCTGTTTACCTGCTCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR CCA 90 bp | CAAATTACCAAAGTGGAAGGAAGAGTATCAAAGCAGCTAGAGCCATaGTCTCTGTGTATAGGAGGCTGGGGCCCAGAGCCCATGTCAAGT | + |
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Preference number: 1 (lower is better) Translates to: QITKVEGRVSKQLEP*SLCIGGWGPEPMSS Trigger: ACTTGACATGGGCTCTGGGCCCCAGCCTCCTATACACAGAGACCATGGCTCTAGCTGCTTTGATACTCTTCCTTCCACTTTGGTAATTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR TCA 90 bp | AGACTAGCGGGCCAAGATGCAACAGAAATGCAAGAGCCAATGAGATaGAGGATGCATAAGAAGATGCTGAGGAACTGCAGTCTTCCCCAT | + |
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Preference number: 1 (lower is better) Translates to: RLAGQDATEMQEPMR*RMHKKMLRNCSLPH Trigger: ATGGGGAAGACTGCAGTTCCTCAGCATCTTCTTATGCATCCTTCATCTCATTGGCTCTTGCATTTCTGTTGCATCTTGGCCCGCTAGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR CCA 90 bp | ATAGATCAGATAGACTTAGGCAGAAAGAGAAAGCAATATTCTGCCTaGCTCCTGAGCCATCATGAGACCAGGGACGAGGCACTGCAAAGA | + |
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Preference number: 1 (lower is better) Translates to: IDQIDLGRKRKQYSA*LLSHHETRDEALQR Trigger: TCTTTGCAGTGCCTCGTCCCTGGTCTCATGATGGCTCAGGAGCCAGGCAGAATATTGCTTTCTCTTTCTGCCTAAGTCTATCTGATCTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR-3UTR CCA 90 bp | AGCAGAGCAAGTGGGGCCAGCCTGAGCCCACTGGTAGGCAGCCGTCCCTGTCCTCCTCTCTGGTGCCCCTaGCAGCATTCAAGCCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: SRASGASLSPLVGSRPCPPLWCP*QHSSLL Trigger: CAGGAGGCTTGAATGCTGCCAGGGGCACCAGAGAGG...AGGACAGGGACGGCTGCCTACCAGTGGGCTCAGGCTGGCCCCACTTGCTCTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR CAA 90 bp | AAGTGCCAACCCTCAGCTCCTCCCTACGGTCACCTGCCTGAGAACTaGCTGTCAGTTCCCCAGCTTCATACCAGCTTCCCTGCCTGCCCC | + |
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Preference number: 2 (lower is better) Translates to: KCQPSAPPYGHLPEN*LSVPQLHTSFPACP Trigger: GGGGCAGGCAGGGAAGCTGGTATGAAGCTGGGGAACTGACAGCAAGTTCTCAGGCAGGTGACCGTAGGGAGGAGCTGAGGGTTGGCACTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR-3UTR GCA 90 bp | GCCATGAGAATCCCTCCAGAAGGGCAAGAGCCAGAAGAGTCCCTAGAGCAGGCTACCAGCTTCCCTGCCTaGCCCATCCAACCAGACCCA | + |
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Preference number: 2 (lower is better) Translates to: AMRIPPEGQEPEESLEQATSFPA*PIQPDP Trigger: TGGGTCTGGTTGGATGGGGCAGGCAGGGAAGCTGGT...AGCCTGCTCTAGGGACTCTTCTGGCTCTTGCCCTTCTGGAGGGATTCTCATGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR-3UTR GCA 90 bp | GCTCAGAAACGTGAGCCAGGAAGCAGGCCATCAGCTGTGCCAGCGACCCCAAGACACTTTTCCTGGAAGTaGCAACCCTCAGCTCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: AQKREPGSRPSAVPATPRHFSWK*QPSAPP Trigger: GGGAGGAGCTGAGGGTTGGCACTTCCAGGAAAAGTG...TCTTGGGGTCGCTGGCACAGCTGATGGCCTGCTTCCTGGCTCACGTTTCTGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR-3UTR GCA 90 bp | CGAGATTCAGCGACAGGGAGGGGACCTTCATTCCATATACTGCTGAGCCCCTGCTGCTACCCTCTCTGGTaGCCCTGGCAGCATTCAAGC | + |
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Preference number: 2 (lower is better) Translates to: RDSATGRGPSFHILLSPCCYPLW*PWQHSS Trigger: GCTTGAATGCTGCCAGGGGCACCAGAGAGGGTAGCA...GCAGGGGCTCAGCAGTATATGGAATGAAGGTCCCCTCCCTGTCGCTGAATCTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR-3UTR GCA 90 bp | CCTCCAGGAGCCGGAAGCGCAGGTGAGTGTGGCCTGTGTGCTCTGAGCAGCAGCAAGCCTCAGAAAAACTaGCTTTGCCCACTCATTCTC | + |
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Preference number: 2 (lower is better) Translates to: PPGAGSAGECGLCALSSSKPQKN*LCPLIL Trigger: GAGAATGAGTGGGCAAAGGCAGTTTTTCTGAGGCTT...GCTGCTGCTCAGAGCACACAGGCCACACTCACCTGCGCTTCCGGCTCCTGGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR-3UTR TCA 90 bp | CTCAAATGGTCTCTGTGCCCAGAAGGCAGCAGAACTGTGCTTGAGCTAGGAAGTAGCCGGAAGCGCAGGTaGGTGTGGCCTGTGTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: LKWSLCPEGSRTVLELGSSRKRR*VWPVCS Trigger: AGAGCACACAGGCCACACTCACCTGCGCTTCCGGCT...ACTTCCTAGCTCAAGCACAGTTCTGCTGCCTTCTGGGCACAGAGACCATTTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR-3UTR GCA 90 bp | CTCAAATGGTCTCTGTGCCCAGAAGGCAGCAGAACTGTGCTTGAGCTAGGAAGTTGGCTCTCTTGGTCTTaGCCCCCACATGCCCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: LKWSLCPEGSRTVLELGSWLSWS*PPHALP Trigger: GGGGAGGGCATGTGGGGGGCAAGACCAAGAGAGCCA...ACTTCCTAGCTCAAGCACAGTTCTGCTGCCTTCTGGGCACAGAGACCATTTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR-3UTR GCA 90 bp | GTGCCCGGGATGAGGCTCACCTTCTTAGAAGACAGAGCTCACATCCCTCCAGGATCATACCAGCTTCCCTaGCTGCCCCATCCAACCAGA | + |
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Preference number: 2 (lower is better) Translates to: VPGMRLTFLEDRAHIPPGSYQLP*LPHPTR Trigger: TCTGGTTGGATGGGGCAGGCAGGGAAGCTGGTATGA...TCCTGGAGGGATGTGAGCTCTGTCTTCTAAGAAGGTGAGCCTCATCCCGGGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR-3UTR GCA 90 bp | CGAGATTCAGCGACAGGGAGGGGACCTTCATTCCATATACTGCTGAGCCCCTGCTGCAAGGTCAACAGATaGTGGTCTGTGCCCGGGATG | + |
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Preference number: 2 (lower is better) Translates to: RDSATGRGPSFHILLSPCCKVNR*WSVPGM Trigger: CATCCCGGGCACAGACCAGCATCTGTTGACCTTGCA...GCAGGGGCTCAGCAGTATATGGAATGAAGGTCCCCTCCCTGTCGCTGAATCTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR-3UTR CCA 90 bp | AGCACAGCTGGGCTTCCTGAGGAGATCCACAAGACAGTAAAGAAGCCCCTGTGTAACCAGACCCAACTCTaGGGAAGGGAGGGCTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: STAGLPEEIHKTVKKPLCNQTQL*GREGWG Trigger: TCCCCAGCCCTCCCTTCCCCAGAGTTGGGTCTGGTT...ACACAGGGGCTTCTTTACTGTCTTGTGGATCTCCTCAGGAAGCCCAGCTGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR-3UTR TCA 90 bp | GCATCCCTTAAGCTACCAGCACAGCTGGGCTTCCTGAGGAGATCCACAAGACAGCTACGGTCACCTGCCTaGGAACTTGCTGTCAGTTCC | + |
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Preference number: 2 (lower is better) Translates to: ASLKLPAQLGFLRRSTRQLRSPA*ELAVSS Trigger: GGAACTGACAGCAAGTTCTCAGGCAGGTGACCGTAG...CTGTCTTGTGGATCTCCTCAGGAAGCCCAGCTGTGCTGGTAGCTTAAGGGATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR-3UTR TCA 90 bp | TCCAGTCTAGTGGGGAGACAGACCATACCGCAGGCCAGTGAGCCTAGACATCTGGGAGAGTTGGGGGCCTaGAAAGATTTGGCCAACCAT | + |
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Preference number: 2 (lower is better) Translates to: SSLVGRQTIPQASEPRHLGELGA*KDLANH Trigger: ATGGTTGGCCAAATCTTTTCAGGCCCCCAACTCTCC...CAGATGTCTAGGCTCACTGGCCTGCGGTATGGTCTGTCTCCCCACTAGACTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR-3UTR CCA 90 bp | CTCAAATGGTCTCTGTGCCCAGAAGGCAGCAGAACTGTGCTTGAGCTAGGAAGTGAGGGAGACCTGGGCTaGCAGAAGACACCTTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: LKWSLCPEGSRTVLELGSEGDLG*QKTPSR Trigger: CCTGGAAGGTGTCTTCTGCCAGCCCAGGTCTCCCTC...ACTTCCTAGCTCAAGCACAGTTCTGCTGCCTTCTGGGCACAGAGACCATTTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR-3UTR GCA 90 bp | GCATCCCTTAAGCTACCAGCACAGCTGGGCTTCCTGAGGAGATCCACAAGACAGACCTGCCTGAGAACTTaGTGTCAGTTCCCCAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: ASLKLPAQLGFLRRSTRQTCLRT*CQFPSF Trigger: GAAGCTGGGGAACTGACAGCAAGTTCTCAGGCAGGT...CTGTCTTGTGGATCTCCTCAGGAAGCCCAGCTGTGCTGGTAGCTTAAGGGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR-3UTR GCA 90 bp | TTAGGCAGAAAGAGAAAGCAATATTCTGCCTGGCTCCTGAGCCATCATGAGACCGCAGGCCATCAGCTGTaGCAGCGACCCCAAGACCCA | + |
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Preference number: 2 (lower is better) Translates to: LGRKRKQYSAWLLSHHETAGHQL*QRPQDP Trigger: TGGGTCTTGGGGTCGCTGGCACAGCTGATGGCCTGC...GGTCTCATGATGGCTCAGGAGCCAGGCAGAATATTGCTTTCTCTTTCTGCCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR-3UTR CCA 90 bp | GCTCAGAAACGTGAGCCAGGAAGCAGGCCATCAGCTGTGCCAGCGACCCCAAGAAAAATGCACTTTTCCTaGAAGTGCCAACCCTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: AQKREPGSRPSAVPATPRKMHFS*KCQPSA Trigger: AGCTGAGGGTTGGCACTTCCAGGAAAAGTGCATTTT...TCTTGGGGTCGCTGGCACAGCTGATGGCCTGCTTCCTGGCTCACGTTTCTGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR-3UTR CCA 90 bp | GCATCCCTTAAGCTACCAGCACAGCTGGGCTTCCTGAGGAGATCCACAAGACAGTGTGATGAGTTGACCTaGGTTCGCTTGGGAAAGCCC | + |
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Preference number: 2 (lower is better) Translates to: ASLKLPAQLGFLRRSTRQCDELT*VRLGKP Trigger: GGGCTTTCCCAAGCGAACCCAGGTCAACTCATCACA...CTGTCTTGTGGATCTCCTCAGGAAGCCCAGCTGTGCTGGTAGCTTAAGGGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGGAGGAGAAGCCTCAGAAAAACTGCCTTTGCCCACTCATTCTCATCCCTGTTCCCACTTAGGGCCATaGGAATCCCTCCAGAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: RGGEASEKLPLPTHSHPCSHLGP*ESLQKG Trigger: GCCCTTCTGGAGGGATTCTCATGGCCCTAAGTGGGA...ACAGGGATGAGAATGAGTGGGCAAAGGCAGTTTTTCTGAGGCTTCTCCTCCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR-3UTR TCA 90 bp | GCATCCCTTAAGCTACCAGCACAGCTGGGCTTCCTGAGGAGATCCACAAGACAGTGCATAAGAAGATGCTaGGGAACTGCAGTCTTCCCC | + |
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Preference number: 2 (lower is better) Translates to: ASLKLPAQLGFLRRSTRQCIRRC*GTAVFP Trigger: GGGGAAGACTGCAGTTCCTCAGCATCTTCTTATGCA...CTGTCTTGTGGATCTCCTCAGGAAGCCCAGCTGTGCTGGTAGCTTAAGGGATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR-3UTR GCA 90 bp | TTAGGCAGAAAGAGAAAGCAATATTCTGCCTGGCTCCTGAGCCATCATGAGACCCTCCCTACGGTCACCTaGCTGAGAACTTGCTGTCAG | + |
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Preference number: 2 (lower is better) Translates to: LGRKRKQYSAWLLSHHETLPTVT*LRTCCQ Trigger: CTGACAGCAAGTTCTCAGGCAGGTGACCGTAGGGAG...GGTCTCATGATGGCTCAGGAGCCAGGCAGAATATTGCTTTCTCTTTCTGCCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR-3UTR GCA 90 bp | AGCACAGCTGGGCTTCCTGAGGAGATCCACAAGACAGTAAAGAAGCCCCTGTGTATACTGCTGAGCCCCTaGAAGGCACTGTATGTAGTT | + |
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Preference number: 2 (lower is better) Translates to: STAGLPEEIHKTVKKPLCILLSP*KALYVV Trigger: AACTACATACAGTGCCTTGCAGGGGCTCAGCAGTAT...ACACAGGGGCTTCTTTACTGTCTTGTGGATCTCCTCAGGAAGCCCAGCTGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR-3UTR GCA 90 bp | ATGCTGAGGAACTGCAGTCTTCCCCATGCCTTGTCCATCTGGGCACCTGCCAGAATTTCAACAGCAAAATaGACTTTTCCTGGAAGTGCC | + |
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Preference number: 2 (lower is better) Translates to: MLRNCSLPHALSIWAPARISTAK*TFPGSA Trigger: GGCACTTCCAGGAAAAGTGCATTTTGCTGTTGAAAT...TCTGGCAGGTGCCCAGATGGACAAGGCATGGGGAAGACTGCAGTTCCTCAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR-3UTR GCA 90 bp | AGCACAGCTGGGCTTCCTGAGGAGATCCACAAGACAGTAAAGAAGCCCCTGTGTCAGAAAAACTGCCTTTaGCCACTCATTCTCATCCCT | + |
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Preference number: 2 (lower is better) Translates to: STAGLPEEIHKTVKKPLCQKNCL*PLILIP Trigger: AGGGATGAGAATGAGTGGGCAAAGGCAGTTTTTCTG...ACACAGGGGCTTCTTTACTGTCTTGTGGATCTCCTCAGGAAGCCCAGCTGTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR-3UTR CCA 90 bp | GCATCCCTTAAGCTACCAGCACAGCTGGGCTTCCTGAGGAGATCCACAAGACAGAAAGGGAATCAGCATTaGACAGGACCCACATTTCAA | + |
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Preference number: 2 (lower is better) Translates to: ASLKLPAQLGFLRRSTRQKGNQH*TGPTFQ Trigger: TTGAAATGTGGGTCCTGTCCAATGCTGATTCCCTTT...CTGTCTTGTGGATCTCCTCAGGAAGCCCAGCTGTGCTGGTAGCTTAAGGGATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGAGACTAGCGGGCCAAGATGCAACAGAAATGCAAGAGCCAATGAGATGAAGTGGACTATCACAGTCTaGGGAAGGAGACACGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: SETSGPRCNRNARANEMKWTITV*GRRHGE Trigger: CTCTCCGTGTCTCCTTCCCCAGACTGTGATAGTCCA...CTTCATCTCATTGGCTCTTGCATTTCTGTTGCATCTTGGCCCGCTAGTCTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR-3UTR CCA 90 bp | GCATCCCTTAAGCTACCAGCACAGCTGGGCTTCCTGAGGAGATCCACAAGACAGAAGAAGATGAACTCCTaGGGTATTAAGGCAAACAGT | + |
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Preference number: 2 (lower is better) Translates to: ASLKLPAQLGFLRRSTRQKKMNS*GIKANS Trigger: ACTGTTTGCCTTAATACCCCAGGAGTTCATCTTCTT...CTGTCTTGTGGATCTCCTCAGGAAGCCCAGCTGTGCTGGTAGCTTAAGGGATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR TCA 72 bp | CAGAGCTCACATCCCTCCAGGAGCCGGAAGCGCAGGTaGGTGTGGCCTGTGTGCTCTGAGCAGCAGCCTAGG | + |
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Preference number: 3 (lower is better) Translates to: QSSHPSRSRKRR*VWPVCSEQQPR Trigger: CCTAGGCTGCTGCTCAGAGCACACAGGCCACACTCACCTGCGCTTCCGGCTCCTGGAGGGATGTGAGCTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR CCA 72 bp | GCTTCCCTGCCTGCCCCATCCAACCAGACCCAACTCTaGGGAAGGGAGGGCTGGGGACATAGCCTCCTAGCA | + |
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Preference number: 3 (lower is better) Translates to: ASLPAPSNQTQL*GREGWGHSLLA Trigger: TGCTAGGAGGCTATGTCCCCAGCCCTCCCTTCCCCAGAGTTGGGTCTGGTTGGATGGGGCAGGCAGGGAAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR TCA 72 bp | GTGAAGGGACAACAGCCACACCAGTGCTCAGAAACGTaGGCCAGGAAGCAGGCCATCAGCTGTGCCAGCGAC | + |
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Preference number: 3 (lower is better) Translates to: VKGQQPHQCSET*ARKQAISCASD Trigger: GTCGCTGGCACAGCTGATGGCCTGCTTCCTGGCTCACGTTTCTGAGCACTGGTGTGGCTGTTGTCCCTTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR GCA 72 bp | CTGTCAGTTCCCCAGCTTCATACCAGCTTCCCTGCCTaGCCCATCCAACCAGACCCAACTCTGGGGAAGGGA | + |
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Preference number: 3 (lower is better) Translates to: LSVPQLHTSFPA*PIQPDPTLGKG Trigger: TCCCTTCCCCAGAGTTGGGTCTGGTTGGATGGGGCAGGCAGGGAAGCTGGTATGAAGCTGGGGAACTGACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR TCA 72 bp | GTGCCAACCCTCAGCTCCTCCCTACGGTCACCTGCCTaGGAACTTGCTGTCAGTTCCCCAGCTTCATACCAG | + |
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Preference number: 3 (lower is better) Translates to: VPTLSSSLRSPA*ELAVSSPASYQ Trigger: CTGGTATGAAGCTGGGGAACTGACAGCAAGTTCTCAGGCAGGTGACCGTAGGGAGGAGCTGAGGGTTGGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR GCA 72 bp | GGAAGTGCCAACCCTCAGCTCCTCCCTACGGTCACCTaGCTGAGAACTTGCTGTCAGTTCCCCAGCTTCATA | + |
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Preference number: 3 (lower is better) Translates to: GSANPQLLPTVT*LRTCCQFPSFI Trigger: TATGAAGCTGGGGAACTGACAGCAAGTTCTCAGGCAGGTGACCGTAGGGAGGAGCTGAGGGTTGGCACTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR CCA 72 bp | AAAGTGGAAGGAAGAGTATCAAAGCAGCTAGAGCCATaGTCTCTGTGTATAGGAGGCTGGGGCCCAGAGCCC | + |
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Preference number: 3 (lower is better) Translates to: KVEGRVSKQLEP*SLCIGGWGPEP Trigger: GGGCTCTGGGCCCCAGCCTCCTATACACAGAGACCATGGCTCTAGCTGCTTTGATACTCTTCCTTCCACTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR-3UTR CAA 90 bp | GTGCCCGGGATGAGGCTCACCTTCTTAGAAGACAGAGCTCACATCCCTCCAGGAGAAAGGGAATCAGCATaGGACAGGACCCACATTTCA | + |
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Preference number: 3 (lower is better) Translates to: VPGMRLTFLEDRAHIPPGERESA*DRTHIS Trigger: TGAAATGTGGGTCCTGTCCAATGCTGATTCCCTTTC...TCCTGGAGGGATGTGAGCTCTGTCTTCTAAGAAGGTGAGCCTCATCCCGGGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR TCA 72 bp | TCATTCTCATCCCTGTTCCCTTCCCACTTAGGGCCATaGGAATCCCTCCAGAAGGGCAAGAGCCAGAAGAGT | + |
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Preference number: 3 (lower is better) Translates to: SFSSLFPSHLGP*ESLQKGKSQKS Trigger: ACTCTTCTGGCTCTTGCCCTTCTGGAGGGATTCTCATGGCCCTAAGTGGGAAGGGAACAGGGATGAGAATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR TCA 72 bp | AGCAGAACTGTGCTTGAGCTAGGAAGTAGCTGGGACTaGAGATTGGCTCTGACTTCCTCCACAGCATCCCTT | + |
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Preference number: 3 (lower is better) Translates to: SRTVLELGSSWD*RLALTSSTASL Trigger: AAGGGATGCTGTGGAGGAAGTCAGAGCCAATCTTCAGTCCCAGCTACTTCCTAGCTCAAGCACAGTTCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR GCA 72 bp | GTGGCAGAAAACAGGTCTGGCAATCTCACCTGTAGCTaGAAAACAAATTCAGAGACTAGCGGGCCAAGATGC | + |
|
Preference number: 3 (lower is better) Translates to: VAENRSGNLTCS*KTNSETSGPRC Trigger: GCATCTTGGCCCGCTAGTCTCTGAATTTGTTTTGCAGCTACAGGTGAGATTGCCAGACCTGTTTTCTGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR CCA 72 bp | AAAGAGCAGGTAAACAGAGCAGACACTAAGCTCAAATaGTCTCTGTGCCCAGAAGGCAGCAGAACTGTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: KEQVNRADTKLK*SLCPEGSRTVL Trigger: AAGCACAGTTCTGCTGCCTTCTGGGCACAGAGACCATTTGAGCTTAGTGTCTGCTCTGTTTACCTGCTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR-3UTR CAA 90 bp | TCAGAGACTAGCGGGCCAAGATGCAACAGAAATGCAAGAGCCAATGAGATGAAGTCAGAAAAACTGCCTTaGCCCACTCATTCTCATCCC | + |
|
Preference number: 3 (lower is better) Translates to: SETSGPRCNRNARANEMKSEKLP*PTHSHP Trigger: GGGATGAGAATGAGTGGGCAAAGGCAGTTTTTCTGA...CTTCATCTCATTGGCTCTTGCATTTCTGTTGCATCTTGGCCCGCTAGTCTCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR TCA 72 bp | GGCCAAGATGCAACAGAAATGCAAGAGCCAATGAGATaGAGGATGCATAAGAAGATGCTGAGGAACTGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: GQDATEMQEPMR*RMHKKMLRNCS Trigger: ACTGCAGTTCCTCAGCATCTTCTTATGCATCCTTCATCTCATTGGCTCTTGCATTTCTGTTGCATCTTGGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR GCA 72 bp | AGCTGCAAAACAAATTCAGAGACTAGCGGGCCAAGATaGAACAGAAATGCAAGAGCCAATGAGATGAAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: SCKTNSETSGPR*NRNARANEMKD Trigger: ATCCTTCATCTCATTGGCTCTTGCATTTCTGTTGCATCTTGGCCCGCTAGTCTCTGAATTTGTTTTGCAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| CDS-3UTR TCA 90 bp | GAGGGGAGGGAGACCTGGGCTGGCAGAAGACACCTTCCAGGCTCCCAGGCACGAAGTAGACGAGGTTGGTaGAAAGGCCCACGCCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: EGRETWAGRRHLPGSQARSRRGW*KGPRQS Trigger: TGATTGGCGTGGGCCTTTTCACCAACCTCGTCTACT...TCGTGCCTGGGAGCCTGGAAGGTGTCTTCTGCCAGCCCAGGTCTCCCTCCCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| CDS-3UTR CCA 90 bp | CGAGATTCAGCGACAGGGAGGGGACCTTCATTCCATATACTGCTGAGCCCCTGCCGCCTGGCTGCATGGTaGAGGGCAGGACATTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RDSATGRGPSFHILLSPCRLAAW*RAGHSP Trigger: GGGAGAATGTCCTGCCCTCCACCATGCAGCCAGGCG...GCAGGGGCTCAGCAGTATATGGAATGAAGGTCCCCTCCCTGTCGCTGAATCTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| CDS-3UTR GCA 90 bp | TTCAGCGACAGGGAGGGGACCTTCATTCCATATACTGCTGAGCCCCTGCAAGGCACGTCATCGCCTGGCTaGATGGTGGAGGGCAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: FSDREGTFIPYTAEPLQGTSSPG*MVEGRT Trigger: TGTCCTGCCCTCCACCATGCAGCCAGGCGATGACGT...GCCTTGCAGGGGCTCAGCAGTATATGGAATGAAGGTCCCCTCCCTGTCGCTGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| CDS-3UTR CCA 90 bp | CGAGATTCAGCGACAGGGAGGGGACCTTCATTCCATATACTGCTGAGCCCCTGCCATCGCCTGGCTGCATaGTGGAGGGCAGGACATTCT | + |
|
Preference number: 4 (lower is better) Translates to: RDSATGRGPSFHILLSPCHRLAA*WRAGHS Trigger: AGAATGTCCTGCCCTCCACCATGCAGCCAGGCGATG...GCAGGGGCTCAGCAGTATATGGAATGAAGGTCCCCTCCCTGTCGCTGAATCTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR CAA 72 bp | CCCTCAGCTCCTCCCTACGGTCACCTGCCTGAGAACTaGCTGTCAGTTCCCCAGCTTCATACCAGCTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PSAPPYGHLPEN*LSVPQLHTSFP Trigger: AGGGAAGCTGGTATGAAGCTGGGGAACTGACAGCAAGTTCTCAGGCAGGTGACCGTAGGGAGGAGCTGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| CDS-3UTR GCA 90 bp | CGAGATTCAGCGACAGGGAGGGGACCTTCATTCCATATACTGCTGAGCCCCTGCAGAAGACAACCAGGATaGCTAAGCGCTTGCCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: RDSATGRGPSFHILLSPCRRQPG*LSACLA Trigger: AGCGAGGCAAGCGCTTAGGCATCCTGGTTGTCTTCT...GCAGGGGCTCAGCAGTATATGGAATGAAGGTCCCCTCCCTGTCGCTGAATCTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| CDS-3UTR CCA 90 bp | TCCAGTCTAGTGGGGAGACAGACCATACCGCAGGCCAGTGAGCCTAGACATCTGCGCCAATCATGCTGGTaGGGAAACGCTCAAAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: SSLVGRQTIPQASEPRHLRQSCW*GNAQRR Trigger: ACGTCTTTGAGCGTTTCCCCACCAGCATGATTGGCG...CAGATGTCTAGGCTCACTGGCCTGCGGTATGGTCTGTCTCCCCACTAGACTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| CDS-3UTR TCA 90 bp | AGCACAGCTGGGCTTCCTGAGGAGATCCACAAGACAGTAAAGAAGCCCCTGTGTCTCCCCAGCCGAAAGTaGCACGAAGAAAGCAAACGG | + |
|
Preference number: 4 (lower is better) Translates to: STAGLPEEIHKTVKKPLCLPSRK*HEESKR Trigger: CCGTTTGCTTTCTTCGTGTCACTTTCGGCTGGGGAG...ACACAGGGGCTTCTTTACTGTCTTGTGGATCTCCTCAGGAAGCCCAGCTGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| 3UTR CAA 72 bp | ACACGGAGAGGAGGAGAAGCCTCAGAAAAACTGCCTTaGCCCACTCATTCTCATCCCTGTTCCCTTCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: TRRGGEASEKLP*PTHSHPCSLPT Trigger: AGTGGGAAGGGAACAGGGATGAGAATGAGTGGGCAAAGGCAGTTTTTCTGAGGCTTCTCCTCCTCTCCGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| CDS-3UTR TCA 90 bp | AGATGGTCTACATCTCTAACCCAGCTACAGACTTTCTACCCCTCCCCCACCCTGCAGGATGAAGTTAGGTaGCGTCAGCATGATGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RWSTSLTQLQTFYPSPTLQDEVR*RQHDEG Trigger: CCCTTCATCATGCTGACGTCACCTAACTTCATCCTG...CAGGGTGGGGGAGGGGTAGAAAGTCTGTAGCTGGGTTAGAGATGTAGACCATCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| CDS-3UTR TCA 90 bp | TCAGAGACTAGCGGGCCAAGATGCAACAGAAATGCAAGAGCCAATGAGATGAAGTCCACAGGCAGAATGTaGAGTAGGCCAGGACCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SETSGPRCNRNARANEMKSTGRM*SRPGPQ Trigger: CTGAGGTCCTGGCCTACTTCACATTCTGCCTGTGGA...CTTCATCTCATTGGCTCTTGCATTTCTGTTGCATCTTGGCCCGCTAGTCTCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| CDS-3UTR TCA 90 bp | CTCAAATGGTCTCTGTGCCCAGAAGGCAGCAGAACTGTGCTTGAGCTAGGAAGTCTCGCTTGCCTTTGGTaGAGTAATTGGAGACCACGT | + |
|
Preference number: 4 (lower is better) Translates to: LKWSLCPEGSRTVLELGSLACLW*SNWRPR Trigger: ACGTGGTCTCCAATTACTTCACCAAAGGCAAGCGAG...ACTTCCTAGCTCAAGCACAGTTCTGCTGCCTTCTGGGCACAGAGACCATTTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| CDS-3UTR GCA 90 bp | AGATGGTCTACATCTCTAACCCAGCTACAGACTTTCTACCCCTCCCCCACCCTGCTCTTCTATCAGCTCTaGAAGGTAGTACAGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RWSTSLTQLQTFYPSPTLLFYQL*KVVQSS Trigger: GCTGGACTGTACTACCTTGCAGAGCTGATAGAAGAG...CAGGGTGGGGGAGGGGTAGAAAGTCTGTAGCTGGGTTAGAGATGTAGACCATCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| CDS-3UTR GCA 90 bp | TTAGGCAGAAAGAGAAAGCAATATTCTGCCTGGCTCCTGAGCCATCATGAGACCGGCCAGAGTGATGAATaGCACCTGGATGAACAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LGRKRKQYSAWLLSHHETGQSDE*HLDEQR Trigger: TCGCTGTTCATCCAGGTGGCATTCATCACTCTGGCC...GGTCTCATGATGGCTCAGGAGCCAGGCAGAATATTGCTTTCTCTTTCTGCCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| CDS-3UTR CCA 90 bp | TCAGAGACTAGCGGGCCAAGATGCAACAGAAATGCAAGAGCCAATGAGATGAAGCCACGCCAATCATGCTaGTGGGGAAACGCTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SETSGPRCNRNARANEMKPRQSC*WGNAQR Trigger: TCTTTGAGCGTTTCCCCACCAGCATGATTGGCGTGG...CTTCATCTCATTGGCTCTTGCATTTCTGTTGCATCTTGGCCCGCTAGTCTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| CDS GCA 90 bp | CTCTGCAAGGTAGTACAGTCCAGCCGCGACGGCCAGAGTGATGAATaGCACCTGGATGAACAGCGACAGCCAGCTCAGCACGTACATGAA | + |
|
Preference number: 5 (lower is better) Translates to: LCKVVQSSRDGQSDE*HLDEQRQPAQHVHE Trigger: TTCATGTACGTGCTGAGCTGGCTGTCGCTGTTCATCCAGGTGGCATTCATCACTCTGGCCGTCGCGGCTGGACTGTACTACCTTGCAGAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| CDS TCA 90 bp | AGAAGACAACCAGGATGCCTAAGCGCTTGCCTCGCTTGCCTTTGGTaGAGTAATTGGAGACCACGTCATCGCCTGGCTGCATGGTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RRQPGCLSACLACLW*SNWRPRHRLAAWWR Trigger: CCTCCACCATGCAGCCAGGCGATGACGTGGTCTCCAATTACTTCACCAAAGGCAAGCGAGGCAAGCGCTTAGGCATCCTGGTTGTCTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| CDS TCA 90 bp | GCCTGGCTGCATGGTGGAGGGCAGGACATTCTCCCCAGCCGAAAGTaGCACGAAGAAAGCAAACGGGATTATCCACAGGCAGAATGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: AWLHGGGQDILPSRK*HEESKRDYPQAECE Trigger: TTCACATTCTGCCTGTGGATAATCCCGTTTGCTTTCTTCGTGTCACTTTCGGCTGGGGAGAATGTCCTGCCCTCCACCATGCAGCCAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| CDS GCA 90 bp | TTTGATGATTCGGCTGGTGGCCACCGTGTACTCTTCTATCAGCTCTaGAAGGTAGTACAGTCCAGCCGCGACGGCCAGAGTGATGAATGC | + |
|
Preference number: 5 (lower is better) Translates to: FDDSAGGHRVLFYQL*KVVQSSRDGQSDEC Trigger: GCATTCATCACTCTGGCCGTCGCGGCTGGACTGTACTACCTTGCAGAGCTGATAGAAGAGTACACGGTGGCCACCAGCCGAATCATCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| CDS-3UTR CAA 90 bp | ATGCTGAGGAACTGCAGTCTTCCCCATGCCTTGTCCATCTGGGCACCTGCCAGAAACCAGATCATGTATTaGATGATTCGGCTGGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: MLRNCSLPHALSIWAPARNQIMY*MIRLVA Trigger: GGCCACCAGCCGAATCATCAAATACATGATCTGGTT...TCTGGCAGGTGCCCAGATGGACAAGGCATGGGGAAGACTGCAGTTCCTCAGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| CDS-3UTR CAA 90 bp | TCAGAGACTAGCGGGCCAAGATGCAACAGAAATGCAAGAGCCAATGAGATGAAGAGGATGCCTAAGCGCTaGCCTCGCTTGCCTTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SETSGPRCNRNARANEMKRMPKR*PRLPLV Trigger: CACCAAAGGCAAGCGAGGCAAGCGCTTAGGCATCCT...CTTCATCTCATTGGCTCTTGCATTTCTGTTGCATCTTGGCCCGCTAGTCTCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| CDS TCA 90 bp | AAAGTGACACGAAGAAAGCAAACGGGATTATCCACAGGCAGAATGTaGAGTAGGCCAGGACCTCAGAGAAAGGATAATACTCTTCCGCAA | + |
|
Preference number: 5 (lower is better) Translates to: KVTRRKQTGLSTGRM*SRPGPQRKDNTLPQ Trigger: TTGCGGAAGAGTATTATCCTTTCTCTGAGGTCCTGGCCTACTTCACATTCTGCCTGTGGATAATCCCGTTTGCTTTCTTCGTGTCACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| CDS GCA 72 bp | GTAGTACAGTCCAGCCGCGACGGCCAGAGTGATGAATaGCACCTGGATGAACAGCGACAGCCAGCTCAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: VVQSSRDGQSDE*HLDEQRQPAQH Trigger: GTGCTGAGCTGGCTGTCGCTGTTCATCCAGGTGGCATTCATCACTCTGGCCGTCGCGGCTGGACTGTACTAC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| CDS GCA 72 bp | TCGGCTGGTGGCCACCGTGTACTCTTCTATCAGCTCTaGAAGGTAGTACAGTCCAGCCGCGACGGCCAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: SAGGHRVLFYQL*KVVQSSRDGQS Trigger: ACTCTGGCCGTCGCGGCTGGACTGTACTACCTTGCAGAGCTGATAGAAGAGTACACGGTGGCCACCAGCCGA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| CDS TCA 72 bp | CCAGGATGCCTAAGCGCTTGCCTCGCTTGCCTTTGGTaGAGTAATTGGAGACCACGTCATCGCCTGGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: PGCLSACLACLW*SNWRPRHRLAA Trigger: TGCAGCCAGGCGATGACGTGGTCTCCAATTACTTCACCAAAGGCAAGCGAGGCAAGCGCTTAGGCATCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| CDS CCA 72 bp | AGTAATTGGAGACCACGTCATCGCCTGGCTGCATGGTaGAGGGCAGGACATTCTCCCCAGCCGAAAGTGACA | + |
|
Preference number: 6 (lower is better) Translates to: SNWRPRHRLAAW*RAGHSPQPKVT Trigger: TGTCACTTTCGGCTGGGGAGAATGTCCTGCCCTCCACCATGCAGCCAGGCGATGACGTGGTCTCCAATTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| CDS TCA 72 bp | GGAAGGTCTGGAGAAGGCCAAAGTAGACGAGGTTGGTaGAAAGGCCCACGCCAATCATGCTGGTGGGGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: GRSGEGQSRRGW*KGPRQSCWWGN Trigger: GTTTCCCCACCAGCATGATTGGCGTGGGCCTTTTCACCAACCTCGTCTACTTTGGCCTTCTCCAGACCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| CDS CAA 72 bp | CCGATCAGCACTGCTGTGGAGAACCAGATCATGTATTaGATGATTCGGCTGGTGGCCACCGTGTACTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: PISTAVENQIMY*MIRLVATVYSS Trigger: AGAAGAGTACACGGTGGCCACCAGCCGAATCATCAAATACATGATCTGGTTCTCCACAGCAGTGCTGATCGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| CDS CAA 72 bp | CAGTATATCTTCTGCCGACTGGGTAGGATGGCCTCTTaGATGAAGGAGAAGACAACCAGGATGCCTAAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: QYIFCRLGRMAS*MKEKTTRMPKR Trigger: GCGCTTAGGCATCCTGGTTGTCTTCTCCTTCATCAAAGAGGCCATCCTACCCAGTCGGCAGAAGATATACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| CDS GCA 72 bp | GGGGAAACGCTCAAAGACGTAGAGGCCGATCAGCACTaGTGTGGAGAACCAGATCATGTATTTGATGATTCG | + |
|
Preference number: 6 (lower is better) Translates to: GETLKDVEADQH*CGEPDHVFDDS Trigger: CGAATCATCAAATACATGATCTGGTTCTCCACAGCAGTGCTGATCGGCCTCTACGTCTTTGAGCGTTTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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| CDS TCA 72 bp | CGAAGAAAGCAAACGGGATTATCCACAGGCAGAATGTaGAGTAGGCCAGGACCTCAGAGAAAGGATAATACT | + |
|
Preference number: 6 (lower is better) Translates to: RRKQTGLSTGRM*SRPGPQRKDNT Trigger: AGTATTATCCTTTCTCTGAGGTCCTGGCCTACTTCACATTCTGCCTGTGGATAATCCCGTTTGCTTTCTTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014892.8 |
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