Pregenerated sensors for TEX26 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029660Ensembl transcript IDs: ENSMUST00000031667.8, ENSMUST00000200985.4, ENSMUST00000201610.2, ENSMUST00000201683.4, ENSMUST00000202677.4, ENSMUST00000202920.4
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGTTTGATGCCAGGACCTTATACTTTCTAGGTAACCACTACCACTaGGCAGTGTTCCAGCCGGCTCCACTCCAGCTCCACAGCACGTAC | + |
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Preference number: 1 (lower is better) Translates to: GFDARTLYFLGNHYH*AVFQPAPLQLHSTY Trigger: GTACGTGCTGTGGAGCTGGAGTGGAGCCGGCTGGAACACTGCTCAGTGGTAGTGGTTACCTAGAAAGTATAAGGTCCTGGCATCAAACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202677.4 |
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| 3UTR TCA 90 bp | CTTTGTAGGAAACACTTTGCAGGTAGTCGTGGACTTGGGAGGGCGTaGATGAGTCTAAGATTGTCAAGAAGTCCAGGCAGGCTTTCCCGT | + |
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Preference number: 1 (lower is better) Translates to: LCRKHFAGSRGLGRA*MSLRLSRSPGRLSR Trigger: ACGGGAAAGCCTGCCTGGACTTCTTGACAATCTTAGACTCATTCACGCCCTCCCAAGTCCACGACTACCTGCAAAGTGTTTCCTACAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000200985.4 ENSMUST00000201610.2 ENSMUST00000202677.4 |
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| 3UTR TCA 90 bp | TTGGTAATTATATCGAAATTCAGTGTCCAGAGGCCGGGGAAGGAGTaGTTTCCTGTCCTGGGACCTTGGAAATCTTTTCATGGTCTTCTT | + |
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Preference number: 1 (lower is better) Translates to: LVIISKFSVQRPGKE*FPVLGPWKSFHGLL Trigger: AAGAAGACCATGAAAAGATTTCCAAGGTCCCAGGACAGGAAATCACTCCTTCCCCGGCCTCTGGACACTGAATTTCGATATAATTACCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000200985.4 ENSMUST00000201610.2 ENSMUST00000202677.4 |
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| 3UTR CCA 90 bp | GCACCCATATTTGAAACTAAAGTCCTTCAATTCAGGAATTTGAGCTaGAATTTGGTAATTATATCGAAATTCAGTGTCCAGAGGCCGGGG | + |
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Preference number: 1 (lower is better) Translates to: APIFETKVLQFRNLS*NLVIISKFSVQRPG Trigger: CCCCGGCCTCTGGACACTGAATTTCGATATAATTACCAAATTCCAGCTCAAATTCCTGAATTGAAGGACTTTAGTTTCAAATATGGGTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000200985.4 ENSMUST00000201610.2 ENSMUST00000202677.4 |
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| 3UTR GCA 90 bp | TCAGGGTCTCTTTCTGTGACTTTGTTTTTCTCTCTTATTAGGCTTTaGCTCAATGTCACAGTGAGAATGGATAAAGCGCTCAAGAATTTG | + |
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Preference number: 1 (lower is better) Translates to: SGSLSVTLFFSLIRL*LNVTVRMDKALKNL Trigger: CAAATTCTTGAGCGCTTTATCCATTCTCACTGTGACATTGAGGCAAAGCCTAATAAGAGAGAAAAACAAAGTCACAGAAAGAGACCCTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000200985.4 ENSMUST00000201610.2 ENSMUST00000202677.4 |
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| 3UTR TCA 90 bp | ATGGTCTTCTTAGATTTATTTAGTTGCTTGTTTGCTTTGCAATGCTaGGGGTTTGATGCCAGGACCTTATACTTTCTAGGTAACCACTAC | + |
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Preference number: 1 (lower is better) Translates to: MVFLDLFSCLFALQC*GFDARTLYFLGNHY Trigger: GTAGTGGTTACCTAGAAAGTATAAGGTCCTGGCATCAAACCCTCAGCATTGCAAAGCAAACAAGCAACTAAATAAATCTAAGAAGACCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202677.4 |
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| 3UTR-3UTR TCA 90 bp | GGCCGGGGAAGGAGTGATTTCCTGTCCTGGGACCTTGGAAATCTTTTCATGGTCAGGCCGGGGAAGGAGTaGTTTCCTGTCCTGGGACCT | + |
|
Preference number: 2 (lower is better) Translates to: GRGRSDFLSWDLGNLFMVRPGKE*FPVLGP Trigger: AGGTCCCAGGACAGGAAATCACTCCTTCCCCGGCCT...GACCATGAAAAGATTTCCAAGGTCCCAGGACAGGAAATCACTCCTTCCCCGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000200985.4 ENSMUST00000201610.2 ENSMUST00000202677.4 |
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| 3UTR-3UTR GCA 90 bp | GGCCGGGGAAGGAGTGATTTCCTGTCCTGGGACCTTGGAAATCTTTTCATGGTCCTACTGCGTTCTGTATaGTTTCCTCGGAAGGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: GRGRSDFLSWDLGNLFMVLLRSV*FPRKEA Trigger: AGCCTCCTTCCGAGGAAAGCATACAGAACGCAGTAG...GACCATGAAAAGATTTCCAAGGTCCCAGGACAGGAAATCACTCCTTCCCCGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000201610.2 ENSMUST00000202677.4 |
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| 3UTR-3UTR TCA 90 bp | GTCACAGTGAGAATGGATAAAGCGCTCAAGAATTTGTCGGTCTTTGTAGGAAACAGGCCGGGGAAGGAGTaGTTTCCTGTCCTGGGACCT | + |
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Preference number: 2 (lower is better) Translates to: VTVRMDKALKNLSVFVGNRPGKE*FPVLGP Trigger: AGGTCCCAGGACAGGAAATCACTCCTTCCCCGGCCT...GTTTCCTACAAAGACCGACAAATTCTTGAGCGCTTTATCCATTCTCACTGTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000200985.4 ENSMUST00000201610.2 ENSMUST00000202677.4 |
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| 3UTR CAA 90 bp | CAGAGCTCCATCTGTCCACCGGTCTCAGGGTCTCTTTCTGTGACTTaGTTTTTCTCTCTTATTAGGCTTTGCCTCAATGTCACAGTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: QSSICPPVSGSLSVT*FFSLIRLCLNVTVR Trigger: TCTCACTGTGACATTGAGGCAAAGCCTAATAAGAGAGAAAAACAAAGTCACAGAAAGAGACCCTGAGACCGGTGGACAGATGGAGCTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000200985.4 ENSMUST00000201610.2 ENSMUST00000202677.4 |
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| 3UTR-3UTR GCA 90 bp | AAAGCGCTCAAGAATTTGTCGGTCTTTGTAGGAAACACTTTGCAGGTAGTCGTGGGCAACAGGCAGGCTTaGGTAGCACCCATATTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: KALKNLSVFVGNTLQVVVGNRQA*VAPIFE Trigger: TTCAAATATGGGTGCTACGCAAGCCTGCCTGTTGCC...CACGACTACCTGCAAAGTGTTTCCTACAAAGACCGACAAATTCTTGAGCGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000200985.4 ENSMUST00000201610.2 ENSMUST00000202677.4 |
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| 3UTR-3UTR CCA 90 bp | GATTATCAGAAAACAACCAGAGCTCCATCTGTCCACCGGTCTCAGGGTCTCTTTCAGGTATACTCATCGTaGTACTGGGACTCATTCAGA | + |
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Preference number: 2 (lower is better) Translates to: DYQKTTRAPSVHRSQGLFQVYSS*YWDSFR Trigger: TCTGAATGAGTCCCAGTACCACGATGAGTATACCTG...AAAGAGACCCTGAGACCGGTGGACAGATGGAGCTCTGGTTGTTTTCTGATAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201610.2 ENSMUST00000202677.4 |
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| 3UTR CAA 90 bp | GTTCTGTATGCTTTCCTCGGAAGGAGGCTCTATCCAAGGGAGCTTTaGGGTTTGTTTTCCTTTAGGGTGTGTCCACTGAAAGAATTCTTG | + |
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Preference number: 2 (lower is better) Translates to: VLYAFLGRRLYPREL*GLFSFRVCPLKEFL Trigger: CAAGAATTCTTTCAGTGGACACACCCTAAAGGAAAACAAACCCAAAAGCTCCCTTGGATAGAGCCTCCTTCCGAGGAAAGCATACAGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201610.2 ENSMUST00000202677.4 |
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| 3UTR CAA 90 bp | TTTCCTGTCCTGGGACCTTGGAAATCTTTTCATGGTCTTCTTAGATaGAGTCAGGTCTACGAAGTCCCTCTTGGTACAGGAGATGAACTG | + |
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Preference number: 2 (lower is better) Translates to: FPVLGPWKSFHGLLR*SQVYEVPLGTGDEL Trigger: CAGTTCATCTCCTGTACCAAGAGGGACTTCGTAGACCTGACTCAATCTAAGAAGACCATGAAAAGATTTCCAAGGTCCCAGGACAGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201610.2 |
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| 3UTR-3UTR GCA 90 bp | TTTGAGCTGGAATTTGGTAATTATATCGAAATTCAGTGTCCAGAGGCCGGGGAAGGCAACAGGCAGGCTTaGGTAGCACCCATATTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: FELEFGNYIEIQCPEAGEGNRQA*VAPIFE Trigger: TTCAAATATGGGTGCTACGCAAGCCTGCCTGTTGCC...TTCCCCGGCCTCTGGACACTGAATTTCGATATAATTACCAAATTCCAGCTCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000200985.4 ENSMUST00000201610.2 ENSMUST00000202677.4 |
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| 3UTR-3UTR CCA 90 bp | TTTTTCTTGATTATCAGAAAACAACCAGAGCTCCATCTGTCCACCGGTCTCAGGTGTCCCACACTAGCTTaGGAGTTTATTGAGTCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: FFLIIRKQPELHLSTGLRCPTLA*EFIESG Trigger: ACCTGACTCAATAAACTCCCAAGCTAGTGTGGGACA...CCTGAGACCGGTGGACAGATGGAGCTCTGGTTGTTTTCTGATAATCAAGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000202677.4 |
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| 3UTR-3UTR CCA 90 bp | CTTTGCCTCAATGTCACAGTGAGAATGGATAAAGCGCTCAAGAATTTGTCGGTCAGTGATTTCCTGTCCTaGGACCTTGGAAATCTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: LCLNVTVRMDKALKNLSVSDFLS*DLGNLF Trigger: GAAAAGATTTCCAAGGTCCCAGGACAGGAAATCACT...GACCGACAAATTCTTGAGCGCTTTATCCATTCTCACTGTGACATTGAGGCAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000200985.4 ENSMUST00000201610.2 ENSMUST00000202677.4 |
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| 3UTR-3UTR CCA 90 bp | TTTGAGCTGGAATTTGGTAATTATATCGAAATTCAGTGTCCAGAGGCCGGGGAACAGGTATACTCATCGTaGTACTGGGACTCATTCAGA | + |
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Preference number: 2 (lower is better) Translates to: FELEFGNYIEIQCPEAGEQVYSS*YWDSFR Trigger: TCTGAATGAGTCCCAGTACCACGATGAGTATACCTG...TTCCCCGGCCTCTGGACACTGAATTTCGATATAATTACCAAATTCCAGCTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201610.2 ENSMUST00000202677.4 |
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| 3UTR-3UTR GCA 90 bp | CTTATTAGGCTTTGCCTCAATGTCACAGTGAGAATGGATAAAGCGCTCAAGAATTGGTCTGCTTCTTTGTaGGTTCCTCGTTCCGAATAT | + |
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Preference number: 2 (lower is better) Translates to: LIRLCLNVTVRMDKALKNWSASL*VPRSEY Trigger: ATATTCGGAACGAGGAACGCACAAAGAAGCAGACCA...ATTCTTGAGCGCTTTATCCATTCTCACTGTGACATTGAGGCAAAGCCTAATAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000200985.4 ENSMUST00000201610.2 ENSMUST00000202677.4 |
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| 3UTR-3UTR GCA 90 bp | ATTAGGCTTTGCCTCAATGTCACAGTGAGAATGGATAAAGCGCTCAAGAATTTGTGGTCTGCTTCTTTGTaGGTTCCTCGTTCCGAATAT | + |
|
Preference number: 2 (lower is better) Translates to: IRLCLNVTVRMDKALKNLWSASL*VPRSEY Trigger: ATATTCGGAACGAGGAACGCACAAAGAAGCAGACCA...CAAATTCTTGAGCGCTTTATCCATTCTCACTGTGACATTGAGGCAAAGCCTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000200985.4 ENSMUST00000201610.2 ENSMUST00000202677.4 |
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| 3UTR-3UTR CCA 90 bp | CAGGCTTGCGTAGCACCCATATTTGAAACTAAAGTCCTTCAATTCAGGAATTTGAGTGATTTCCTGTCCTaGGACCTTGGAAATCTTTTC | + |
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Preference number: 2 (lower is better) Translates to: QACVAPIFETKVLQFRNLSDFLS*DLGNLF Trigger: GAAAAGATTTCCAAGGTCCCAGGACAGGAAATCACT...CAAATTCCTGAATTGAAGGACTTTAGTTTCAAATATGGGTGCTACGCAAGCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000200985.4 ENSMUST00000201610.2 ENSMUST00000202677.4 |
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| 3UTR CAA 90 bp | ATATTTGAAACTAAAGTCCTTCAATTCAGGAATTTGAGCTGGAATTaGGTAATTATATCGAAATTCAGTGTCCAGAGGCCGGGGAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: IFETKVLQFRNLSWN*VIISKFSVQRPGKE Trigger: CTCCTTCCCCGGCCTCTGGACACTGAATTTCGATATAATTACCAAATTCCAGCTCAAATTCCTGAATTGAAGGACTTTAGTTTCAAATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000200985.4 ENSMUST00000201610.2 ENSMUST00000202677.4 |
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| 3UTR-3UTR TCA 90 bp | AAATTAATCATACACTGGATTAGCCACATACAGGGAAGCTATGAGGAATTCCCCCATTTATTGGGAAGTTaGAATTTCTCTGAGGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: KLIIHWISHIQGSYEEFPHLLGS*NFSEEE Trigger: TTCCTCCTCAGAGAAATTTCAACTTCCCAATAAATG...GGGGAATTCCTCATAGCTTCCCTGTATGTGGCTAATCCAGTGTATGATTAATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201683.4 |
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| 3UTR-3UTR GCA 90 bp | GATTTCCTGTCCTGGGACCTTGGAAATCTTTTCATGGTCTTCTTAGATTTATTTGTTGCTTGTTTGCTTTaGAATGCTGAGGGTTTGATG | + |
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Preference number: 2 (lower is better) Translates to: DFLSWDLGNLFMVFLDLFVACLL*NAEGLM Trigger: CATCAAACCCTCAGCATTGCAAAGCAAACAAGCAAC...AAATAAATCTAAGAAGACCATGAAAAGATTTCCAAGGTCCCAGGACAGGAAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202677.4 |
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| 3UTR CAA 90 bp | TGCGTAGCACCCATATTTGAAACTAAAGTCCTTCAATTCAGGAATTaGAGCTGGAATTTGGTAATTATATCGAAATTCAGTGTCCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: CVAPIFETKVLQFRN*SWNLVIISKFSVQR Trigger: CCTCTGGACACTGAATTTCGATATAATTACCAAATTCCAGCTCAAATTCCTGAATTGAAGGACTTTAGTTTCAAATATGGGTGCTACGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000200985.4 ENSMUST00000201610.2 ENSMUST00000202677.4 |
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| 3UTR TCA 72 bp | GCCAGGACCTTATACTTTCTAGGTAACCACTACCACTaGGCAGTGTTCCAGCCGGCTCCACTCCAGCTCCAC | + |
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Preference number: 3 (lower is better) Translates to: ARTLYFLGNHYH*AVFQPAPLQLH Trigger: GTGGAGCTGGAGTGGAGCCGGCTGGAACACTGCTCAGTGGTAGTGGTTACCTAGAAAGTATAAGGTCCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202677.4 |
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| 3UTR CCA 72 bp | GTGTCCAGAGGCCGGGGAAGGAGTGATTTCCTGTCCTaGGACCTTGGAAATCTTTTCATGGTCTTCTTAGTG | + |
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Preference number: 3 (lower is better) Translates to: VSRGRGRSDFLS*DLGNLFMVFLV Trigger: CACTAAGAAGACCATGAAAAGATTTCCAAGGTCCCAGGACAGGAAATCACTCCTTCCCCGGCCTCTGGACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200985.4 |
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| 3UTR-3UTR CAA 90 bp | AGAGGCCGGGGAAGGAGTGATTTCCTGTCCTGGGACCTTGGAAATCTTTTCATGTCCTGTCCTGGGACCTaGGAAATCTTTTCATGGTCT | + |
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Preference number: 3 (lower is better) Translates to: RGRGRSDFLSWDLGNLFMSCPGT*EIFSWS Trigger: AGACCATGAAAAGATTTCCAAGGTCCCAGGACAGGA...CATGAAAAGATTTCCAAGGTCCCAGGACAGGAAATCACTCCTTCCCCGGCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000200985.4 ENSMUST00000201610.2 ENSMUST00000202677.4 |
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| 3UTR CCA 72 bp | GTGTCCAGAGGCCGGGGAAGGAGTGATTTCCTGTCCTaGGACCTTGGAAATCTTTTCATGGTCTTCTTAGAT | + |
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Preference number: 3 (lower is better) Translates to: VSRGRGRSDFLS*DLGNLFMVFLD Trigger: ATCTAAGAAGACCATGAAAAGATTTCCAAGGTCCCAGGACAGGAAATCACTCCTTCCCCGGCCTCTGGACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000201610.2 ENSMUST00000202677.4 |
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| 3UTR-3UTR CAA 90 bp | GAATTTGTCGGTCTTTGTAGGAAACACTTTGCAGGTAGTCGTGGACTTGGGAGGTCTACGAAGTCCCTCTaGGTACAGGAGATGAACTGG | + |
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Preference number: 3 (lower is better) Translates to: EFVGLCRKHFAGSRGLGRSTKSL*VQEMNW Trigger: CCAGTTCATCTCCTGTACCAAGAGGGACTTCGTAGA...CCTCCCAAGTCCACGACTACCTGCAAAGTGTTTCCTACAAAGACCGACAAATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201610.2 ENSMUST00000202677.4 |
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| 3UTR-3UTR CAA 90 bp | GGAGGCAACAGGCAGGCTTGCGTAGCACCCATATTTGAAACTAAAGTCCTTCAATCCTGTCCTGGGACCTaGGAAATCTTTTCATGGTCT | + |
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Preference number: 3 (lower is better) Translates to: GGNRQACVAPIFETKVLQSCPGT*EIFSWS Trigger: AGACCATGAAAAGATTTCCAAGGTCCCAGGACAGGA...TTGAAGGACTTTAGTTTCAAATATGGGTGCTACGCAAGCCTGCCTGTTGCCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000200985.4 ENSMUST00000201610.2 ENSMUST00000202677.4 |
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| 3UTR-3UTR CAA 90 bp | GATTATCAGAAAACAACCAGAGCTCCATCTGTCCACCGGTCTCAGGGTCTCTTTAGGGAGCTTTTGGGTTaGTTTTCCTTTAGGGTGTGT | + |
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Preference number: 3 (lower is better) Translates to: DYQKTTRAPSVHRSQGLFRELLG*FSFRVC Trigger: ACACACCCTAAAGGAAAACAAACCCAAAAGCTCCCT...AAAGAGACCCTGAGACCGGTGGACAGATGGAGCTCTGGTTGTTTTCTGATAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000201610.2 ENSMUST00000202677.4 |
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| 3UTR-3UTR CAA 90 bp | GGAGGCAACAGGCAGGCTTGCGTAGCACCCATATTTGAAACTAAAGTCCTTCAAAGGGAGCTTTTGGGTTaGTTTTCCTTTAGGGTGTGT | + |
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Preference number: 3 (lower is better) Translates to: GGNRQACVAPIFETKVLQRELLG*FSFRVC Trigger: ACACACCCTAAAGGAAAACAAACCCAAAAGCTCCCT...TTGAAGGACTTTAGTTTCAAATATGGGTGCTACGCAAGCCTGCCTGTTGCCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000201610.2 ENSMUST00000202677.4 |
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| 3UTR TCA 72 bp | ATATCGAAATTCAGTGTCCAGAGGCCGGGGAAGGAGTaGTTTCCTGTCCTGGGACCTTGGAAATCTTTTCAT | + |
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Preference number: 3 (lower is better) Translates to: ISKFSVQRPGKE*FPVLGPWKSFH Trigger: ATGAAAAGATTTCCAAGGTCCCAGGACAGGAAATCACTCCTTCCCCGGCCTCTGGACACTGAATTTCGATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000200985.4 ENSMUST00000201610.2 ENSMUST00000202677.4 |
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| 3UTR-3UTR CAA 90 bp | GTCACAGTGAGAATGGATAAAGCGCTCAAGAATTTGTCGGTCTTTGTAGGAAACTCTACGAAGTCCCTCTaGGTACAGGAGATGAACTGG | + |
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Preference number: 3 (lower is better) Translates to: VTVRMDKALKNLSVFVGNSTKSL*VQEMNW Trigger: CCAGTTCATCTCCTGTACCAAGAGGGACTTCGTAGA...GTTTCCTACAAAGACCGACAAATTCTTGAGCGCTTTATCCATTCTCACTGTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201610.2 ENSMUST00000202677.4 |
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| 3UTR TCA 72 bp | TCCACTCCAGCTCCACAGCACGTACCCTTCTATAATTaGCTGGTTTTGCTGGTAAAATTTCTTGTCCCACAC | + |
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Preference number: 3 (lower is better) Translates to: STPAPQHVPFYN*LVLLVKFLVPH Trigger: GTGTGGGACAAGAAATTTTACCAGCAAAACCAGTCAATTATAGAAGGGTACGTGCTGTGGAGCTGGAGTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202677.4 |
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| 3UTR TCA 72 bp | TGGGACCTTGGAAATCTTTTCATGGTCTTCTTAGATTaGGTCAGGTCTACGAAGTCCCTCTTGGTACAGGAG | + |
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Preference number: 3 (lower is better) Translates to: WDLGNLFMVFLD*VRSTKSLLVQE Trigger: CTCCTGTACCAAGAGGGACTTCGTAGACCTGACTCAATCTAAGAAGACCATGAAAAGATTTCCAAGGTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201610.2 |
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| 3UTR-3UTR CAA 90 bp | AAAGCGCTCAAGAATTTGTCGGTCTTTGTAGGAAACACTTTGCAGGTAGTCGTGCATGGTCTTCTTAGATaGAGTCAGGTCTACGAAGTC | + |
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Preference number: 3 (lower is better) Translates to: KALKNLSVFVGNTLQVVVHGLLR*SQVYEV Trigger: GACTTCGTAGACCTGACTCAATCTAAGAAGACCATG...CACGACTACCTGCAAAGTGTTTCCTACAAAGACCGACAAATTCTTGAGCGCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201610.2 |
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| 3UTR CCA 72 bp | GGTTTTGCTGGTAAAATTTCTTGTCCCACACTAGCTTaGGAGTTTATTGAGTCAGGTCTACGAAGTCCCTCT | + |
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Preference number: 3 (lower is better) Translates to: GFAGKISCPTLA*EFIESGLRSPS Trigger: AGAGGGACTTCGTAGACCTGACTCAATAAACTCCCAAGCTAGTGTGGGACAAGAAATTTTACCAGCAAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202677.4 |
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| 3UTR-3UTR CAA 90 bp | GATTTCCTGTCCTGGGACCTTGGAAATCTTTTCATGGTCTTCTTAGATTTATTTTGCAATGCTGAGGGTTaGATGCCAGGACCTTATACT | + |
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Preference number: 3 (lower is better) Translates to: DFLSWDLGNLFMVFLDLFCNAEG*MPGPYT Trigger: AGTATAAGGTCCTGGCATCAAACCCTCAGCATTGCA...AAATAAATCTAAGAAGACCATGAAAAGATTTCCAAGGTCCCAGGACAGGAAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202677.4 |
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| 3UTR-3UTR CAA 90 bp | GATTTCCTGTCCTGGGACCTTGGAAATCTTTTCATGGTCTTCTTAGATTTATTTTATCCAAGGGAGCTTTaGGGTTTGTTTTCCTTTAGG | + |
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Preference number: 3 (lower is better) Translates to: DFLSWDLGNLFMVFLDLFYPREL*GLFSFR Trigger: CCTAAAGGAAAACAAACCCAAAAGCTCCCTTGGATA...AAATAAATCTAAGAAGACCATGAAAAGATTTCCAAGGTCCCAGGACAGGAAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000202677.4 |
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| 3UTR TCA 72 bp | TTAGATTTATTTAGTTGCTTGTTTGCTTTGCAATGCTaGGGGTTTGATGCCAGGACCTTATACTTTCTAGGT | + |
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Preference number: 3 (lower is better) Translates to: LDLFSCLFALQC*GFDARTLYFLG Trigger: ACCTAGAAAGTATAAGGTCCTGGCATCAAACCCTCAGCATTGCAAAGCAAACAAGCAACTAAATAAATCTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202677.4 |
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| CDS-3UTR TCA 90 bp | GGTAATTATATCGAAATTCAGTGTCCAGAGGCCGGGGAAGGAGTGATTTCCTGTGCTGGTGTCACCTGTTaGCTGGAGCTTGGGGTCACA | + |
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Preference number: 4 (lower is better) Translates to: GNYIEIQCPEAGEGVISCAGVTC*LELGVT Trigger: TGTGACCCCAAGCTCCAGTCAACAGGTGACACCAGC...ACAGGAAATCACTCCTTCCCCGGCCTCTGGACACTGAATTTCGATATAATTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000201610.2 ENSMUST00000202677.4 |
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| CDS-3UTR CCA 90 bp | GGAGGCAACAGGCAGGCTTGCGTAGCACCCATATTTGAAACTAAAGTCCTTCAACTGTTGACTGGAGCTTaGGGTCACATTGAGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GGNRQACVAPIFETKVLQLLTGA*GHIEQG Trigger: GCCCTGCTCAATGTGACCCCAAGCTCCAGTCAACAG...TTGAAGGACTTTAGTTTCAAATATGGGTGCTACGCAAGCCTGCCTGTTGCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201610.2 ENSMUST00000202677.4 |
||
| CDS-3UTR CCA 90 bp | GACCAGGGTGAGTTTTGTGGTTCCATACTCCTCTTGAAGTCCCGGTTTTTACCACTGTTGACTGGAGCTTaGGGTCACATTGAGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: DQGEFCGSILLLKSRFLPLLTGA*GHIEQG Trigger: GCCCTGCTCAATGTGACCCCAAGCTCCAGTCAACAG...TGGTAAAAACCGGGACTTCAAGAGGAGTATGGAACCACAAAACTCACCCTGGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000201610.2 ENSMUST00000202677.4 |
||
| CDS-3UTR GCA 90 bp | GGCCGGGGAAGGAGTGATTTCCTGTCCTGGGACCTTGGAAATCTTTTCATGGTCTCTTTTAGGTGTGAATaGTGTCTTCATCGTGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: GRGRSDFLSWDLGNLFMVSFRCE*CLHRGS Trigger: GCTACCACGATGAAGACAGCATTCACACCTAAAAGA...GACCATGAAAAGATTTCCAAGGTCCCAGGACAGGAAATCACTCCTTCCCCGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000201610.2 ENSMUST00000202677.4 |
||
| 3UTR CAA 72 bp | GCTTTCCTCGGAAGGAGGCTCTATCCAAGGGAGCTTTaGGGTTTGTTTTCCTTTAGGGTGTGTCCACTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: AFLGRRLYPREL*GLFSFRVCPLK Trigger: TTTCAGTGGACACACCCTAAAGGAAAACAAACCCAAAAGCTCCCTTGGATAGAGCCTCCTTCCGAGGAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201610.2 ENSMUST00000202677.4 |
||
| CDS-3UTR TCA 90 bp | AGGTATGTCATGGGGGAAATTGGAACTTTAAATCCTTCCATTTTAGCAACACAGAGGCCGGGGAAGGAGTaGTTTCCTGTCCTGGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: RYVMGEIGTLNPSILATQRPGKE*FPVLGP Trigger: AGGTCCCAGGACAGGAAATCACTCCTTCCCCGGCCT...CTGTGTTGCTAAAATGGAAGGATTTAAAGTTCCAATTTCCCCCATGACATACCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000031667.8 ENSMUST00000201683.4 ENSMUST00000202920.4 |
||
| CDS-3UTR TCA 90 bp | CATGGGGGAAATTGGAACTTTAAATCCTTCCATTTTAGCAACACAGAACATACAAGGCCGGGGAAGGAGTaGTTTCCTGTCCTGGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: HGGNWNFKSFHFSNTEHTRPGKE*FPVLGP Trigger: AGGTCCCAGGACAGGAAATCACTCCTTCCCCGGCCT...TGTATGTTCTGTGTTGCTAAAATGGAAGGATTTAAAGTTCCAATTTCCCCCATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000031667.8 ENSMUST00000201683.4 ENSMUST00000202920.4 |
||
| CDS-3UTR TCA 90 bp | AGGTATGTCATGGGGGAAATTGGAACTTTAAATCCTTCCATTTTAGCAACACAGGCTGGTGTCACCTGTTaGCTGGAGCTTGGGGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: RYVMGEIGTLNPSILATQAGVTC*LELGVT Trigger: TGTGACCCCAAGCTCCAGTCAACAGGTGACACCAGC...CTGTGTTGCTAAAATGGAAGGATTTAAAGTTCCAATTTCCCCCATGACATACCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000201683.4 |
||
| CDS-3UTR TCA 90 bp | GGGGGAAATTGGAACTTTAAATCCTTCCATTTTAGCAACACAGAACATACATGTCCAGCTGGTGTCACTTaGCTGGAGCTTGGGGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: GGNWNFKSFHFSNTEHTCPAGVT*LELGVT Trigger: TGTGACCCCAAGCTCCAGTCAAGTGACACCAGCTGG...ACATGTATGTTCTGTGTTGCTAAAATGGAAGGATTTAAAGTTCCAATTTCCCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031667.8 |
||
| 3UTR CAA 72 bp | CTGGGACCTTGGAAATCTTTTCATGGTCTTCTTAGATaGAGTCAGGTCTACGAAGTCCCTCTTGGTACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LGPWKSFHGLLR*SQVYEVPLGTG Trigger: TCCTGTACCAAGAGGGACTTCGTAGACCTGACTCAATCTAAGAAGACCATGAAAAGATTTCCAAGGTCCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201610.2 |
||
| CDS-3UTR CCA 90 bp | TGTCATGGGGGAAATTGGAACTTTAAATCCTTCCATTTTAGCAACACAGAACATCACTTGACTGGAGCTTaGGGTCACATTGAGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CHGGNWNFKSFHFSNTEHHLTGA*GHIEQG Trigger: GCCCTGCTCAATGTGACCCCAAGCTCCAGTCAAGTG...ATGTTCTGTGTTGCTAAAATGGAAGGATTTAAAGTTCCAATTTCCCCCATGACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031667.8 |
||
| CDS-3UTR CCA 90 bp | CATGGGGGAAATTGGAACTTTAAATCCTTCCATTTTAGCAACACAGAACATACACTGTTGACTGGAGCTTaGGGTCACATTGAGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HGGNWNFKSFHFSNTEHTLLTGA*GHIEQG Trigger: GCCCTGCTCAATGTGACCCCAAGCTCCAGTCAACAG...TGTATGTTCTGTGTTGCTAAAATGGAAGGATTTAAAGTTCCAATTTCCCCCATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201683.4 |
||
| CDS-3UTR GCA 90 bp | TTTTTCTTGATTATCAGAAAACAACCAGAGCTCCATCTGTCCACCGGTCTCAGGTCTTTTAGGTGTGAATaGTGTCTTCATCGTGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: FFLIIRKQPELHLSTGLRSFRCE*CLHRGS Trigger: GCTACCACGATGAAGACAGCATTCACACCTAAAAGA...CCTGAGACCGGTGGACAGATGGAGCTCTGGTTGTTTTCTGATAATCAAGAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000201610.2 ENSMUST00000202677.4 |
||
| CDS-3UTR GCA 90 bp | CAGCTAAAGGTATGTCATGGGGGAAATTGGAACTTTAAATCCTTCCATTTTAGCCTACTGCGTTCTGTATaGTTTCCTCGGAAGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QLKVCHGGNWNFKSFHFSLLRSV*FPRKEA Trigger: AGCCTCCTTCCGAGGAAAGCATACAGAACGCAGTAG...GCTAAAATGGAAGGATTTAAAGTTCCAATTTCCCCCATGACATACCTTTAGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000031667.8 ENSMUST00000200985.4 ENSMUST00000201683.4 ENSMUST00000202920.4 |
||
| CDS-3UTR TCA 90 bp | GAATTTGGTAATTATATCGAAATTCAGTGTCCAGAGGCCGGGGAAGGAGTGATTATTTCTCAGAGGTTTTaGCTTATAGTCAGCCGGATC | + |
|
Preference number: 4 (lower is better) Translates to: EFGNYIEIQCPEAGEGVIISQRF*LIVSRI Trigger: GATCCGGCTGACTATAAGTCAAAACCTCTGAGAAAT...AATCACTCCTTCCCCGGCCTCTGGACACTGAATTTCGATATAATTACCAAATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200985.4 |
||
| CDS-3UTR GCA 90 bp | TGTCATGGGGGAAATTGGAACTTTAAATCCTTCCATTTTAGCAACACAGAACATCTACTGCGTTCTGTATaGTTTCCTCGGAAGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CHGGNWNFKSFHFSNTEHLLRSV*FPRKEA Trigger: AGCCTCCTTCCGAGGAAAGCATACAGAACGCAGTAG...ATGTTCTGTGTTGCTAAAATGGAAGGATTTAAAGTTCCAATTTCCCCCATGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000031667.8 ENSMUST00000200985.4 ENSMUST00000201683.4 ENSMUST00000202920.4 |
||
| CDS-3UTR GCA 90 bp | CTAAAGGTATGTCATGGGGGAAATTGGAACTTTAAATCCTTCCATTTTAGCAACCTACTGCGTTCTGTATaGTTTCCTCGGAAGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LKVCHGGNWNFKSFHFSNLLRSV*FPRKEA Trigger: AGCCTCCTTCCGAGGAAAGCATACAGAACGCAGTAG...GTTGCTAAAATGGAAGGATTTAAAGTTCCAATTTCCCCCATGACATACCTTTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000031667.8 ENSMUST00000200985.4 ENSMUST00000201683.4 ENSMUST00000202920.4 |
||
| CDS-3UTR GCA 90 bp | CATGGGGGAAATTGGAACTTTAAATCCTTCCATTTTAGCAACACAGAACATACACTACTGCGTTCTGTATaGTTTCCTCGGAAGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HGGNWNFKSFHFSNTEHTLLRSV*FPRKEA Trigger: AGCCTCCTTCCGAGGAAAGCATACAGAACGCAGTAG...TGTATGTTCTGTGTTGCTAAAATGGAAGGATTTAAAGTTCCAATTTCCCCCATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000031667.8 ENSMUST00000200985.4 ENSMUST00000201683.4 ENSMUST00000202920.4 |
||
| CDS-3UTR GCA 90 bp | CTAAAGGTATGTCATGGGGGAAATTGGAACTTTAAATCCTTCCATTTTAGCAACGGCAACAGGCAGGCTTaGGTAGCACCCATATTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LKVCHGGNWNFKSFHFSNGNRQA*VAPIFE Trigger: TTCAAATATGGGTGCTACGCAAGCCTGCCTGTTGCC...GTTGCTAAAATGGAAGGATTTAAAGTTCCAATTTCCCCCATGACATACCTTTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031667.8 ENSMUST00000201683.4 ENSMUST00000202920.4 |
||
| CDS-3UTR GCA 90 bp | GGGGGAAATTGGAACTTTAAATCCTTCCATTTTAGCAACACAGAACATACATGTGGCAACAGGCAGGCTTaGGTAGCACCCATATTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GGNWNFKSFHFSNTEHTCGNRQA*VAPIFE Trigger: TTCAAATATGGGTGCTACGCAAGCCTGCCTGTTGCC...ACATGTATGTTCTGTGTTGCTAAAATGGAAGGATTTAAAGTTCCAATTTCCCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031667.8 ENSMUST00000201683.4 ENSMUST00000202920.4 |
||
| CDS-3UTR GCA 90 bp | AAATTAATCATACACTGGATTAGCCACATACAGGGAAGCTATGAGGAATTCCCCTGGTCTGCTTCTTTGTaGGTTCCTCGTTCCGAATAT | + |
|
Preference number: 4 (lower is better) Translates to: KLIIHWISHIQGSYEEFPWSASL*VPRSEY Trigger: ATATTCGGAACGAGGAACGCACAAAGAAGCAGACCA...GGGGAATTCCTCATAGCTTCCCTGTATGTGGCTAATCCAGTGTATGATTAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201683.4 |
||
| CDS-3UTR CCA 90 bp | TTTTTCTTGATTATCAGAAAACAACCAGAGCTCCATCTGTCCACCGGTCTCAGGTCTTCTGGTGCTCTTTaGGCTAAGTCTCGTATTAAA | + |
|
Preference number: 4 (lower is better) Translates to: FFLIIRKQPELHLSTGLRSSGAL*AKSRIK Trigger: TTTAATACGAGACTTAGCCCAAAGAGCACCAGAAGA...CCTGAGACCGGTGGACAGATGGAGCTCTGGTTGTTTTCTGATAATCAAGAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000201610.2 ENSMUST00000202677.4 |
||
| CDS-3UTR CCA 90 bp | GCTCAAGAATTTGTCGGTCTTTGTAGGAAACACTTTGCAGGTAGTCGTGGACTTTCTTCTGGTGCTCTTTaGGCTAAGTCTCGTATTAAA | + |
|
Preference number: 4 (lower is better) Translates to: AQEFVGLCRKHFAGSRGLSSGAL*AKSRIK Trigger: TTTAATACGAGACTTAGCCCAAAGAGCACCAGAAGA...AAGTCCACGACTACCTGCAAAGTGTTTCCTACAAAGACCGACAAATTCTTGAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201610.2 ENSMUST00000202677.4 |
||
| 3UTR CAA 72 bp | AATGTCACAGTGAGAATGGATAAAGCGCTCAAGAATTaGTCGGTCTTTGTAGGAAACACTTTGCAGGTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: NVTVRMDKALKN*SVFVGNTLQVV Trigger: GACTACCTGCAAAGTGTTTCCTACAAAGACCGACAAATTCTTGAGCGCTTTATCCATTCTCACTGTGACATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000200985.4 ENSMUST00000201610.2 ENSMUST00000202677.4 |
||
| CDS-3UTR GCA 90 bp | AGGTATGTCATGGGGGAAATTGGAACTTTAAATCCTTCCATTTTAGCAACACAGTGGTCTGCTTCTTTGTaGGTTCCTCGTTCCGAATAT | + |
|
Preference number: 4 (lower is better) Translates to: RYVMGEIGTLNPSILATQWSASL*VPRSEY Trigger: ATATTCGGAACGAGGAACGCACAAAGAAGCAGACCA...CTGTGTTGCTAAAATGGAAGGATTTAAAGTTCCAATTTCCCCCATGACATACCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031667.8 ENSMUST00000201683.4 ENSMUST00000202920.4 |
||
| CDS-3UTR CCA 90 bp | AGGTATGTCATGGGGGAAATTGGAACTTTAAATCCTTCCATTTTAGCAACACAGCAGGTATACTCATCGTaGTACTGGGACTCATTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RYVMGEIGTLNPSILATQQVYSS*YWDSFR Trigger: TCTGAATGAGTCCCAGTACCACGATGAGTATACCTG...CTGTGTTGCTAAAATGGAAGGATTTAAAGTTCCAATTTCCCCCATGACATACCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031667.8 ENSMUST00000201683.4 |
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| CDS-3UTR CCA 90 bp | AAATTAATCATACACTGGATTAGCCACATACAGGGAAGCTATGAGGAATTCCCCAGTGATTTCCTGTCCTaGGACCTTGGAAATCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KLIIHWISHIQGSYEEFPSDFLS*DLGNLF Trigger: GAAAAGATTTCCAAGGTCCCAGGACAGGAAATCACT...GGGGAATTCCTCATAGCTTCCCTGTATGTGGCTAATCCAGTGTATGATTAATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201683.4 |
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| CDS-3UTR GCA 90 bp | AGGTATGTCATGGGGGAAATTGGAACTTTAAATCCTTCCATTTTAGCAACACAGTCTTTTAGGTGTGAATaGTGTCTTCATCGTGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: RYVMGEIGTLNPSILATQSFRCE*CLHRGS Trigger: GCTACCACGATGAAGACAGCATTCACACCTAAAAGA...CTGTGTTGCTAAAATGGAAGGATTTAAAGTTCCAATTTCCCCCATGACATACCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031667.8 ENSMUST00000201683.4 |
||
| CDS-3UTR CCA 90 bp | CTAAAGGTATGTCATGGGGGAAATTGGAACTTTAAATCCTTCCATTTTAGCAACCAGGTATACTCATCGTaGTACTGGGACTCATTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LKVCHGGNWNFKSFHFSNQVYSS*YWDSFR Trigger: TCTGAATGAGTCCCAGTACCACGATGAGTATACCTG...GTTGCTAAAATGGAAGGATTTAAAGTTCCAATTTCCCCCATGACATACCTTTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031667.8 ENSMUST00000201683.4 |
||
| CDS-3UTR CCA 90 bp | CAGCTAAAGGTATGTCATGGGGGAAATTGGAACTTTAAATCCTTCCATTTTAGCAGTGATTTCCTGTCCTaGGACCTTGGAAATCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QLKVCHGGNWNFKSFHFSSDFLS*DLGNLF Trigger: GAAAAGATTTCCAAGGTCCCAGGACAGGAAATCACT...GCTAAAATGGAAGGATTTAAAGTTCCAATTTCCCCCATGACATACCTTTAGCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000031667.8 ENSMUST00000201683.4 ENSMUST00000202920.4 |
||
| CDS-3UTR GCA 90 bp | CTAAAGGTATGTCATGGGGGAAATTGGAACTTTAAATCCTTCCATTTTAGCAACTCTTTTAGGTGTGAATaGTGTCTTCATCGTGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LKVCHGGNWNFKSFHFSNSFRCE*CLHRGS Trigger: GCTACCACGATGAAGACAGCATTCACACCTAAAAGA...GTTGCTAAAATGGAAGGATTTAAAGTTCCAATTTCCCCCATGACATACCTTTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031667.8 ENSMUST00000201683.4 |
||
| 3UTR CAA 72 bp | ACTAAAGTCCTTCAATTCAGGAATTTGAGCTGGAATTaGGTAATTATATCGAAATTCAGTGTCCAGAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: TKVLQFRNLSWN*VIISKFSVQRP Trigger: CGGCCTCTGGACACTGAATTTCGATATAATTACCAAATTCCAGCTCAAATTCCTGAATTGAAGGACTTTAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000200985.4 ENSMUST00000201610.2 ENSMUST00000202677.4 |
||
| CDS-3UTR GCA 90 bp | TGTCATGGGGGAAATTGGAACTTTAAATCCTTCCATTTTAGCAACACAGAACATATCCTAGTCTTCTGGTaGTCTTTGGGCGTATTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: CHGGNWNFKSFHFSNTEHILVFW*SLGVLN Trigger: ATTTAATACGCCCAAAGAGCACCAGAAGACTAGGAT...ATGTTCTGTGTTGCTAAAATGGAAGGATTTAAAGTTCCAATTTCCCCCATGACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031667.8 ENSMUST00000201683.4 |
||
| CDS-3UTR GCA 90 bp | TGTCATGGGGGAAATTGGAACTTTAAATCCTTCCATTTTAGCAACACAGAACATTCTCTTATTAGGCTTTaGCTCAATGTCACAGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CHGGNWNFKSFHFSNTEHSLIRL*LNVTVR Trigger: TCTCACTGTGACATTGAGGCAAAGCCTAATAAGAGA...ATGTTCTGTGTTGCTAAAATGGAAGGATTTAAAGTTCCAATTTCCCCCATGACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031667.8 ENSMUST00000201683.4 ENSMUST00000202920.4 |
||
| CDS-3UTR GCA 90 bp | CATGGGGGAAATTGGAACTTTAAATCCTTCCATTTTAGCAACACAGAACATACATCTCTTATTAGGCTTTaGCTCAATGTCACAGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: HGGNWNFKSFHFSNTEHTSLIRL*LNVTVR Trigger: TCTCACTGTGACATTGAGGCAAAGCCTAATAAGAGA...TGTATGTTCTGTGTTGCTAAAATGGAAGGATTTAAAGTTCCAATTTCCCCCATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031667.8 ENSMUST00000201683.4 ENSMUST00000202920.4 |
||
| CDS-3UTR GCA 90 bp | GGGGAAATTGGAACTTTAAATCCTTCCATTTTAGCAACACAGAACATACATGTCTCTCTTATTAGGCTTTaGCTCAATGTCACAGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GEIGTLNPSILATQNIHVSLIRL*LNVTVR Trigger: TCTCACTGTGACATTGAGGCAAAGCCTAATAAGAGA...GACATGTATGTTCTGTGTTGCTAAAATGGAAGGATTTAAAGTTCCAATTTCCCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031667.8 ENSMUST00000201683.4 ENSMUST00000202920.4 |
||
| CDS TCA 90 bp | TGCTGTCTTCATCGTGGTAGCATAGGAATCCCAGCTGGTGTCACTTaGCTGGAGCTTGGGGTCACATTGAGCAGGGCACGAAACCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: CCLHRGSIGIPAGVT*LELGVTLSRARNLV Trigger: AACAAGGTTTCGTGCCCTGCTCAATGTGACCCCAAGCTCCAGTCAAGTGACACCAGCTGGGATTCCTATGCTACCACGATGAAGACAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031667.8 |
||
| CDS TCA 90 bp | TGTCTTCATCGTGGTAGCATAGGAATCCCAGCTGGTGTCACCTGTTaGCTGGAGCTTGGGGTCACATTGAGCAGGGCACGAAACCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: CLHRGSIGIPAGVTC*LELGVTLSRARNLV Trigger: AACAAGGTTTCGTGCCCTGCTCAATGTGACCCCAAGCTCCAGTCAACAGGTGACACCAGCTGGGATTCCTATGCTACCACGATGAAGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000201610.2 ENSMUST00000201683.4 ENSMUST00000202677.4 |
||
| CDS-3UTR CAA 90 bp | GGTAATTATATCGAAATTCAGTGTCCAGAGGCCGGGGAAGGAGTGATTTCCTGTAGCTGGTGTCACCTGTaGACTGGAGCTTGGGGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: GNYIEIQCPEAGEGVISCSWCHL*TGAWGH Trigger: GTGACCCCAAGCTCCAGTCAACAGGTGACACCAGCT...ACAGGAAATCACTCCTTCCCCGGCCTCTGGACACTGAATTTCGATATAATTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000201610.2 ENSMUST00000202677.4 |
||
| CDS-3UTR CAA 90 bp | GGAAGGAGTGATTTCCTGTCCTGGGACCTTGGAAATCTTTTCATGGTCTTCTTAAGCTGGTGTCACCTGTaGACTGGAGCTTGGGGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: GRSDFLSWDLGNLFMVFLSWCHL*TGAWGH Trigger: GTGACCCCAAGCTCCAGTCAACAGGTGACACCAGCT...TAAGAAGACCATGAAAAGATTTCCAAGGTCCCAGGACAGGAAATCACTCCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000201610.2 ENSMUST00000202677.4 |
||
| CDS-3UTR CAA 90 bp | GGAAGGAGTGATTTCCTGTCCTGGGACCTTGGAAATCTTTTCATGGTCTTCTTAGAGCTTGGGGTCACATaGAGCAGGGCACGAAACCTT | + |
|
Preference number: 5 (lower is better) Translates to: GRSDFLSWDLGNLFMVFLELGVT*SRARNL Trigger: AAGGTTTCGTGCCCTGCTCAATGTGACCCCAAGCTC...TAAGAAGACCATGAAAAGATTTCCAAGGTCCCAGGACAGGAAATCACTCCTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000201610.2 ENSMUST00000202677.4 |
||
| CDS-3UTR CAA 90 bp | AGGTATGTCATGGGGGAAATTGGAACTTTAAATCCTTCCATTTTAGCAACACAGCCCAGCTGGTGTCACTaGACTGGAGCTTGGGGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: RYVMGEIGTLNPSILATQPSWCH*TGAWGH Trigger: GTGACCCCAAGCTCCAGTCAAGTGACACCAGCTGGG...CTGTGTTGCTAAAATGGAAGGATTTAAAGTTCCAATTTCCCCCATGACATACCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031667.8 |
||
| CDS-3UTR CAA 90 bp | CAGGCTTGCGTAGCACCCATATTTGAAACTAAAGTCCTTCAATTCAGGAATTTGGAGCTTGGGGTCACATaGAGCAGGGCACGAAACCTT | + |
|
Preference number: 5 (lower is better) Translates to: QACVAPIFETKVLQFRNLELGVT*SRARNL Trigger: AAGGTTTCGTGCCCTGCTCAATGTGACCCCAAGCTC...CAAATTCCTGAATTGAAGGACTTTAGTTTCAAATATGGGTGCTACGCAAGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201610.2 ENSMUST00000202677.4 |
||
| CDS-3UTR CAA 90 bp | AGGTATGTCATGGGGGAAATTGGAACTTTAAATCCTTCCATTTTAGCAACACAGGAGCTTGGGGTCACATaGAGCAGGGCACGAAACCTT | + |
|
Preference number: 5 (lower is better) Translates to: RYVMGEIGTLNPSILATQELGVT*SRARNL Trigger: AAGGTTTCGTGCCCTGCTCAATGTGACCCCAAGCTC...CTGTGTTGCTAAAATGGAAGGATTTAAAGTTCCAATTTCCCCCATGACATACCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031667.8 ENSMUST00000201683.4 |
||
| CDS-3UTR CAA 90 bp | GGGGGAAATTGGAACTTTAAATCCTTCCATTTTAGCAACACAGAACATACATGTAGCTGGTGTCACCTGTaGACTGGAGCTTGGGGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: GGNWNFKSFHFSNTEHTCSWCHL*TGAWGH Trigger: GTGACCCCAAGCTCCAGTCAACAGGTGACACCAGCT...ACATGTATGTTCTGTGTTGCTAAAATGGAAGGATTTAAAGTTCCAATTTCCCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000201683.4 |
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| CDS-3UTR CAA 90 bp | CTAAAGGTATGTCATGGGGGAAATTGGAACTTTAAATCCTTCCATTTTAGCAACGAGCTTGGGGTCACATaGAGCAGGGCACGAAACCTT | + |
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Preference number: 5 (lower is better) Translates to: LKVCHGGNWNFKSFHFSNELGVT*SRARNL Trigger: AAGGTTTCGTGCCCTGCTCAATGTGACCCCAAGCTC...GTTGCTAAAATGGAAGGATTTAAAGTTCCAATTTCCCCCATGACATACCTTTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031667.8 ENSMUST00000201683.4 |
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| CDS-3UTR CAA 90 bp | GTCACAGTGAGAATGGATAAAGCGCTCAAGAATTTGTCGGTCTTTGTAGGAAACAGGGAGCTTTTGGGTTaGTTTTCCTTTAGGGTGTGT | + |
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Preference number: 5 (lower is better) Translates to: VTVRMDKALKNLSVFVGNRELLG*FSFRVC Trigger: ACACACCCTAAAGGAAAACAAACCCAAAAGCTCCCT...GTTTCCTACAAAGACCGACAAATTCTTGAGCGCTTTATCCATTCTCACTGTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200985.4 |
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| CDS-3UTR CAA 90 bp | AGTGATTTCCTGTCCTGGGACCTTGGAAATCTTTTCATGGTCTTCTTAGTGTGCTATCCAAGGGAGCTTTaGGGTTTGTTTTCCTTTAGG | + |
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Preference number: 5 (lower is better) Translates to: SDFLSWDLGNLFMVFLVCYPREL*GLFSFR Trigger: CCTAAAGGAAAACAAACCCAAAAGCTCCCTTGGATA...GCACACTAAGAAGACCATGAAAAGATTTCCAAGGTCCCAGGACAGGAAATCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200985.4 |
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| CDS-3UTR CAA 90 bp | AGGTATGTCATGGGGGAAATTGGAACTTTAAATCCTTCCATTTTAGCAACACAGTCTACGAAGTCCCTCTaGGTACAGGAGATGAACTGG | + |
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Preference number: 5 (lower is better) Translates to: RYVMGEIGTLNPSILATQSTKSL*VQEMNW Trigger: CCAGTTCATCTCCTGTACCAAGAGGGACTTCGTAGA...CTGTGTTGCTAAAATGGAAGGATTTAAAGTTCCAATTTCCCCCATGACATACCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000031667.8 ENSMUST00000200985.4 ENSMUST00000201683.4 ENSMUST00000202920.4 |
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| CDS-3UTR CAA 90 bp | AAATTAATCATACACTGGATTAGCCACATACAGGGAAGCTATGAGGAATTCCCCTCCTGTCCTGGGACCTaGGAAATCTTTTCATGGTCT | + |
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Preference number: 5 (lower is better) Translates to: KLIIHWISHIQGSYEEFPSCPGT*EIFSWS Trigger: AGACCATGAAAAGATTTCCAAGGTCCCAGGACAGGA...GGGGAATTCCTCATAGCTTCCCTGTATGTGGCTAATCCAGTGTATGATTAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201683.4 |
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| CDS-3UTR CAA 90 bp | CTTTGCCTCAATGTCACAGTGAGAATGGATAAAGCGCTCAAGAATTTGTCGGTCCATTTCTCAGAGGTTTaGACTTATAGTCAGCCGGAT | + |
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Preference number: 5 (lower is better) Translates to: LCLNVTVRMDKALKNLSVHFSEV*TYSQPD Trigger: ATCCGGCTGACTATAAGTCAAAACCTCTGAGAAATG...GACCGACAAATTCTTGAGCGCTTTATCCATTCTCACTGTGACATTGAGGCAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200985.4 |
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| CDS-3UTR CAA 90 bp | TGTCATGGGGGAAATTGGAACTTTAAATCCTTCCATTTTAGCAACACAGAACATTCTACGAAGTCCCTCTaGGTACAGGAGATGAACTGG | + |
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Preference number: 5 (lower is better) Translates to: CHGGNWNFKSFHFSNTEHSTKSL*VQEMNW Trigger: CCAGTTCATCTCCTGTACCAAGAGGGACTTCGTAGA...ATGTTCTGTGTTGCTAAAATGGAAGGATTTAAAGTTCCAATTTCCCCCATGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000031667.8 ENSMUST00000200985.4 ENSMUST00000201683.4 ENSMUST00000202920.4 |
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| CDS-3UTR CAA 90 bp | GGGGAAATTGGAACTTTAAATCCTTCCATTTTAGCAACACAGAACATACATGTCTCTACGAAGTCCCTCTaGGTACAGGAGATGAACTGG | + |
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Preference number: 5 (lower is better) Translates to: GEIGTLNPSILATQNIHVSTKSL*VQEMNW Trigger: CCAGTTCATCTCCTGTACCAAGAGGGACTTCGTAGA...GACATGTATGTTCTGTGTTGCTAAAATGGAAGGATTTAAAGTTCCAATTTCCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031667.8 ENSMUST00000200985.4 ENSMUST00000201683.4 ENSMUST00000202920.4 |
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| CDS-3UTR CAA 90 bp | GGGGGAAATTGGAACTTTAAATCCTTCCATTTTAGCAACACAGAACATACATGTTCTACGAAGTCCCTCTaGGTACAGGAGATGAACTGG | + |
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Preference number: 5 (lower is better) Translates to: GGNWNFKSFHFSNTEHTCSTKSL*VQEMNW Trigger: CCAGTTCATCTCCTGTACCAAGAGGGACTTCGTAGA...ACATGTATGTTCTGTGTTGCTAAAATGGAAGGATTTAAAGTTCCAATTTCCCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000031667.8 ENSMUST00000200985.4 ENSMUST00000201683.4 ENSMUST00000202920.4 |
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| CDS-3UTR CAA 90 bp | AAATTAATCATACACTGGATTAGCCACATACAGGGAAGCTATGAGGAATTCCCCTTTGTAGGAAACACTTaGCAGGTAGTCGTGGACTTG | + |
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Preference number: 5 (lower is better) Translates to: KLIIHWISHIQGSYEEFPFVGNT*QVVVDL Trigger: CAAGTCCACGACTACCTGCAAAGTGTTTCCTACAAA...GGGGAATTCCTCATAGCTTCCCTGTATGTGGCTAATCCAGTGTATGATTAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201683.4 |
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| CDS-3UTR CAA 90 bp | CATGGGGGAAATTGGAACTTTAAATCCTTCCATTTTAGCAACACAGAACATACATCCTGTCCTGGGACCTaGGAAATCTTTTCATGGTCT | + |
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Preference number: 5 (lower is better) Translates to: HGGNWNFKSFHFSNTEHTSCPGT*EIFSWS Trigger: AGACCATGAAAAGATTTCCAAGGTCCCAGGACAGGA...TGTATGTTCTGTGTTGCTAAAATGGAAGGATTTAAAGTTCCAATTTCCCCCATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000031667.8 ENSMUST00000201683.4 ENSMUST00000202920.4 |
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| CDS-3UTR CAA 90 bp | CTAAAGGTATGTCATGGGGGAAATTGGAACTTTAAATCCTTCCATTTTAGCAACTCCTGTCCTGGGACCTaGGAAATCTTTTCATGGTCT | + |
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Preference number: 5 (lower is better) Translates to: LKVCHGGNWNFKSFHFSNSCPGT*EIFSWS Trigger: AGACCATGAAAAGATTTCCAAGGTCCCAGGACAGGA...GTTGCTAAAATGGAAGGATTTAAAGTTCCAATTTCCCCCATGACATACCTTTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000031667.8 ENSMUST00000201683.4 ENSMUST00000202920.4 |
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| CDS-3UTR CAA 90 bp | CAGCTAAAGGTATGTCATGGGGGAAATTGGAACTTTAAATCCTTCCATTTTAGCTTTGTAGGAAACACTTaGCAGGTAGTCGTGGACTTG | + |
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Preference number: 5 (lower is better) Translates to: QLKVCHGGNWNFKSFHFSFVGNT*QVVVDL Trigger: CAAGTCCACGACTACCTGCAAAGTGTTTCCTACAAA...GCTAAAATGGAAGGATTTAAAGTTCCAATTTCCCCCATGACATACCTTTAGCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031667.8 ENSMUST00000201683.4 ENSMUST00000202920.4 |
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| CDS-3UTR CAA 90 bp | AGGTATGTCATGGGGGAAATTGGAACTTTAAATCCTTCCATTTTAGCAACACAGTTTGTAGGAAACACTTaGCAGGTAGTCGTGGACTTG | + |
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Preference number: 5 (lower is better) Translates to: RYVMGEIGTLNPSILATQFVGNT*QVVVDL Trigger: CAAGTCCACGACTACCTGCAAAGTGTTTCCTACAAA...CTGTGTTGCTAAAATGGAAGGATTTAAAGTTCCAATTTCCCCCATGACATACCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031667.8 ENSMUST00000201683.4 ENSMUST00000202920.4 |
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| CDS-3UTR CAA 90 bp | GGGGAAATTGGAACTTTAAATCCTTCCATTTTAGCAACACAGAACATACATGTCAGGGAGCTTTTGGGTTaGTTTTCCTTTAGGGTGTGT | + |
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Preference number: 5 (lower is better) Translates to: GEIGTLNPSILATQNIHVRELLG*FSFRVC Trigger: ACACACCCTAAAGGAAAACAAACCCAAAAGCTCCCT...GACATGTATGTTCTGTGTTGCTAAAATGGAAGGATTTAAAGTTCCAATTTCCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000031667.8 ENSMUST00000200985.4 ENSMUST00000201683.4 ENSMUST00000202920.4 |
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| CDS-3UTR CAA 90 bp | GGGGGAAATTGGAACTTTAAATCCTTCCATTTTAGCAACACAGAACATACATGTAGGGAGCTTTTGGGTTaGTTTTCCTTTAGGGTGTGT | + |
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Preference number: 5 (lower is better) Translates to: GGNWNFKSFHFSNTEHTCRELLG*FSFRVC Trigger: ACACACCCTAAAGGAAAACAAACCCAAAAGCTCCCT...ACATGTATGTTCTGTGTTGCTAAAATGGAAGGATTTAAAGTTCCAATTTCCCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000031667.8 ENSMUST00000200985.4 ENSMUST00000201683.4 ENSMUST00000202920.4 |
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| CDS-3UTR CAA 90 bp | CTAAAGGTATGTCATGGGGGAAATTGGAACTTTAAATCCTTCCATTTTAGCAACAGGGAGCTTTTGGGTTaGTTTTCCTTTAGGGTGTGT | + |
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Preference number: 5 (lower is better) Translates to: LKVCHGGNWNFKSFHFSNRELLG*FSFRVC Trigger: ACACACCCTAAAGGAAAACAAACCCAAAAGCTCCCT...GTTGCTAAAATGGAAGGATTTAAAGTTCCAATTTCCCCCATGACATACCTTTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000031667.8 ENSMUST00000200985.4 ENSMUST00000201683.4 ENSMUST00000202920.4 |
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| CDS-3UTR CAA 90 bp | CAGCTAAAGGTATGTCATGGGGGAAATTGGAACTTTAAATCCTTCCATTTTAGCTATCCAAGGGAGCTTTaGGGTTTGTTTTCCTTTAGG | + |
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Preference number: 5 (lower is better) Translates to: QLKVCHGGNWNFKSFHFSYPREL*GLFSFR Trigger: CCTAAAGGAAAACAAACCCAAAAGCTCCCTTGGATA...GCTAAAATGGAAGGATTTAAAGTTCCAATTTCCCCCATGACATACCTTTAGCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000031667.8 ENSMUST00000200985.4 ENSMUST00000201683.4 ENSMUST00000202920.4 |
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| CDS-3UTR CAA 90 bp | TGTCATGGGGGAAATTGGAACTTTAAATCCTTCCATTTTAGCAACACAGAACATCATGGTCTTCTTAGATaGAGTCAGGTCTACGAAGTC | + |
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Preference number: 5 (lower is better) Translates to: CHGGNWNFKSFHFSNTEHHGLLR*SQVYEV Trigger: GACTTCGTAGACCTGACTCAATCTAAGAAGACCATG...ATGTTCTGTGTTGCTAAAATGGAAGGATTTAAAGTTCCAATTTCCCCCATGACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031667.8 ENSMUST00000201683.4 ENSMUST00000202920.4 |
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| CDS-3UTR CAA 90 bp | CTAAAGGTATGTCATGGGGGAAATTGGAACTTTAAATCCTTCCATTTTAGCAACCATGGTCTTCTTAGATaGAGTCAGGTCTACGAAGTC | + |
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Preference number: 5 (lower is better) Translates to: LKVCHGGNWNFKSFHFSNHGLLR*SQVYEV Trigger: GACTTCGTAGACCTGACTCAATCTAAGAAGACCATG...GTTGCTAAAATGGAAGGATTTAAAGTTCCAATTTCCCCCATGACATACCTTTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031667.8 ENSMUST00000201683.4 ENSMUST00000202920.4 |
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| CDS-3UTR CAA 90 bp | GGGGAAATTGGAACTTTAAATCCTTCCATTTTAGCAACACAGAACATACATGTCCATGGTCTTCTTAGATaGAGTCAGGTCTACGAAGTC | + |
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Preference number: 5 (lower is better) Translates to: GEIGTLNPSILATQNIHVHGLLR*SQVYEV Trigger: GACTTCGTAGACCTGACTCAATCTAAGAAGACCATG...GACATGTATGTTCTGTGTTGCTAAAATGGAAGGATTTAAAGTTCCAATTTCCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031667.8 ENSMUST00000201683.4 ENSMUST00000202920.4 |
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| CDS-3UTR CAA 90 bp | CTAAAGGTATGTCATGGGGGAAATTGGAACTTTAAATCCTTCCATTTTAGCAACTATCCAAGGGAGCTTTaGGGTTTGTTTTCCTTTAGG | + |
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Preference number: 5 (lower is better) Translates to: LKVCHGGNWNFKSFHFSNYPREL*GLFSFR Trigger: CCTAAAGGAAAACAAACCCAAAAGCTCCCTTGGATA...GTTGCTAAAATGGAAGGATTTAAAGTTCCAATTTCCCCCATGACATACCTTTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000031667.8 ENSMUST00000200985.4 ENSMUST00000201683.4 ENSMUST00000202920.4 |
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| CDS-3UTR CAA 90 bp | TGTCATGGGGGAAATTGGAACTTTAAATCCTTCCATTTTAGCAACACAGAACATTATCCAAGGGAGCTTTaGGGTTTGTTTTCCTTTAGG | + |
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Preference number: 5 (lower is better) Translates to: CHGGNWNFKSFHFSNTEHYPREL*GLFSFR Trigger: CCTAAAGGAAAACAAACCCAAAAGCTCCCTTGGATA...ATGTTCTGTGTTGCTAAAATGGAAGGATTTAAAGTTCCAATTTCCCCCATGACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000031667.8 ENSMUST00000200985.4 ENSMUST00000201683.4 ENSMUST00000202920.4 |
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| CDS TCA 72 bp | CATCGTGGTAGCATAGGAATCCCAGCTGGTGTCACTTaGCTGGAGCTTGGGGTCACATTGAGCAGGGCACGA | + |
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Preference number: 6 (lower is better) Translates to: HRGSIGIPAGVT*LELGVTLSRAR Trigger: TCGTGCCCTGCTCAATGTGACCCCAAGCTCCAGTCAAGTGACACCAGCTGGGATTCCTATGCTACCACGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031667.8 |
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| CDS CCA 72 bp | AGGAATCCCAGCTGGTGTCACCTGTTGACTGGAGCTTaGGGTCACATTGAGCAGGGCACGAAACCTTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: RNPSWCHLLTGA*GHIEQGTKPCS Trigger: GGAACAAGGTTTCGTGCCCTGCTCAATGTGACCCCAAGCTCCAGTCAACAGGTGACACCAGCTGGGATTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000201610.2 ENSMUST00000201683.4 ENSMUST00000202677.4 |
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| CDS CCA 72 bp | CATAGGAATCCCAGCTGGTGTCACTTGACTGGAGCTTaGGGTCACATTGAGCAGGGCACGAAACCTTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: HRNPSWCHLTGA*GHIEQGTKPCS Trigger: GGAACAAGGTTTCGTGCCCTGCTCAATGTGACCCCAAGCTCCAGTCAAGTGACACCAGCTGGGATTCCTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031667.8 |
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