Pregenerated sensors for TEX24 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071138Ensembl transcript IDs: ENSMUST00000095375.5
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCACATGGAATACACGGGATGGTGACGGACTCTTGGAATTCTGTCTaGTTCCCATGTGGAACAATGGGTGCCTCAGTCACCTGGCCCATT | + |
|
Preference number: 1 (lower is better) Translates to: SHGIHGMVTDSWNSV*FPCGTMGASVTWPI Trigger: AATGGGCCAGGTGACTGAGGCACCCATTGTTCCACATGGGAATCAGACAGAATTCCAAGAGTCCGTCACCATCCCGTGTATTCCATGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| 3UTR CCA 90 bp | TGGAGTGTCCAGGAAATTACTGTAGCAGCTCAACTGCCTGGAACTTaGTGGATTGAGGTCCAACAAAAATATTTCTCCGGAAAAATACTA | + |
|
Preference number: 1 (lower is better) Translates to: WSVQEITVAAQLPGT*WIEVQQKYFSGKIL Trigger: TAGTATTTTTCCGGAGAAATATTTTTGTTGGACCTCAATCCACCAAGTTCCAGGCAGTTGAGCTGCTACAGTAATTTCCTGGACACTCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| 3UTR-3UTR CCA 90 bp | TCCTCATTGATGTTTCCTAAAGTTGTCTTATCTTCAATTCTTGCTTTCACATGGTGTCTGATTCCCATGTaGAACAATGGGTGCCTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: SSLMFPKVVLSSILAFTWCLIPM*NNGCLS Trigger: ACTGAGGCACCCATTGTTCCACATGGGAATCAGACA...CCATGTGAAAGCAAGAATTGAAGATAAGACAACTTTAGGAAACATCAATGAGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| 3UTR-3UTR GCA 90 bp | ATCCAATTGACTGATAATCTCGTCACACTTGACAAGACTCTATTTTGTTCTCCTCTTATCTTCAATTCTTaGTTTCACATGGAATACACG | + |
|
Preference number: 2 (lower is better) Translates to: IQLTDNLVTLDKTLFCSPLIFNS*FHMEYT Trigger: CGTGTATTCCATGTGAAAGCAAGAATTGAAGATAAG...AGGAGAACAAAATAGAGTCTTGTCAAGTGTGACGAGATTATCAGTCAATTGGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| 3UTR CCA 72 bp | GGCCCATTGAAGTCACAGTCGCTGGTGAAGGTAATCTaGTCCTCGTTCCTGTATTGTGCTCGAGCAGGATGC | + |
|
Preference number: 3 (lower is better) Translates to: GPLKSQSLVKVI*SSFLYCARAGC Trigger: GCATCCTGCTCGAGCACAATACAGGAACGAGGACCAGATTACCTTCACCAGCGACTGTGACTTCAATGGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| 3UTR TCA 72 bp | ATACACGGGATGGTGACGGACTCTTGGAATTCTGTCTaGTTCCCATGTGGAACAATGGGTGCCTCAGTCACC | + |
|
Preference number: 3 (lower is better) Translates to: IHGMVTDSWNSV*FPCGTMGASVT Trigger: GGTGACTGAGGCACCCATTGTTCCACATGGGAATCAGACAGAATTCCAAGAGTCCGTCACCATCCCGTGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| 3UTR CCA 72 bp | ACTCTTGGAATTCTGTCTGATTCCCATGTGGAACAATaGGTGCCTCAGTCACCTGGCCCATTGAAGTCACAG | + |
|
Preference number: 3 (lower is better) Translates to: TLGILSDSHVEQ*VPQSPGPLKSQ Trigger: CTGTGACTTCAATGGGCCAGGTGACTGAGGCACCCATTGTTCCACATGGGAATCAGACAGAATTCCAAGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| 3UTR TCA 72 bp | TACTGTAGCAGCTCAACTGCCTGGAACTTGGTGGATTaGGGTCCAACAAAAATATTTCTCCGGAAAAATACT | + |
|
Preference number: 3 (lower is better) Translates to: YCSSSTAWNLVD*GPTKIFLRKNT Trigger: AGTATTTTTCCGGAGAAATATTTTTGTTGGACCTCAATCCACCAAGTTCCAGGCAGTTGAGCTGCTACAGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| 3UTR CCA 72 bp | CCTAAAGTTGTCTTATCTTCAATTCTTGCTTTCACATaGAATACACGGGATGGTGACGGACTCTTGGAATTC | + |
|
Preference number: 3 (lower is better) Translates to: PKVVLSSILAFT*NTRDGDGLLEF Trigger: GAATTCCAAGAGTCCGTCACCATCCCGTGTATTCCATGTGAAAGCAAGAATTGAAGATAAGACAACTTTAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS-3UTR CCA 90 bp | CCCCAAGAGAGAAGCCCAGGGCCCCAGGTATTCTGCCTCATATGTCACCAACCAGCGTGGAAGATGGCCTaGCTTCCTCTTGCCATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PQERSPGPQVFCLICHQPAWKMA*LPLAMS Trigger: GCTCATGGCAAGAGGAAGCCAGGCCATCTTCCACGC...TGGTTGGTGACATATGAGGCAGAATACCTGGGGCCCTGGGCTTCTCTCTTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS-3UTR GCA 90 bp | GAACAATGGGTGCCTCAGTCACCTGGCCCATTGAAGTCACAGTCGCTGGTGAAGCCCTTGGGCCTCCCCTaGTGTTGCTTTGGGGCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: EQWVPQSPGPLKSQSLVKPLGLP*CCFGAN Trigger: ATTAGCCCCAAAGCAACAGCAGGGGAGGCCCAAGGG...CTTCACCAGCGACTGTGACTTCAATGGGCCAGGTGACTGAGGCACCCATTGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS-3UTR CCA 90 bp | GAACAATGGGTGCCTCAGTCACCTGGCCCATTGAAGTCACAGTCGCTGGTGAAGGTCCTCTTCTTCCCTTaGGCCTCCCCTGCTGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EQWVPQSPGPLKSQSLVKVLFFP*ASPAVA Trigger: AGCAACAGCAGGGGAGGCCCAAGGGAAGAAGAGGAC...CTTCACCAGCGACTGTGACTTCAATGGGCCAGGTGACTGAGGCACCCATTGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS-3UTR CCA 90 bp | TCCCATGTGGAACAATGGGTGCCTCAGTCACCTGGCCCATTGAAGTCACAGTCGTTAGGGTCAGGGGCATaGCCCTTGACAGCACTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SHVEQWVPQSPGPLKSQSLGSGA*PLTALL Trigger: AAGCAGTGCTGTCAAGGGCCATGCCCCTGACCCTAA...CGACTGTGACTTCAATGGGCCAGGTGACTGAGGCACCCATTGTTCCACATGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS-3UTR TCA 90 bp | CTGGAGTGTCCAGGAAATTACTGTAGCAGCTCAACTGCCTGGAACTTGGTGGATGGCTTCCTCTTGCCATaGGCAGTGCTAGGCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LECPGNYCSSSTAWNLVDGFLLP*AVLGSS Trigger: GGAGCTGCCTAGCACTGCTCATGGCAAGAGGAAGCC...ATCCACCAAGTTCCAGGCAGTTGAGCTGCTACAGTAATTTCCTGGACACTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS-3UTR TCA 90 bp | GGTCCTCGTTCCTGTATTGTGCTCGAGCAGGATGCAGAGAAAGTGTCTACTCTCAGGAGTTCCCTGGACTaGGAGGTCCCAGTCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GPRSCIVLEQDAEKVSTLRSSLD*EVPVFC Trigger: GCAGAAGACTGGGACCTCTCAGTCCAGGGAACTCCT...GAGAGTAGACACTTTCTCTGCATCCTGCTCGAGCACAATACAGGAACGAGGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS-3UTR GCA 90 bp | CGGGATGGTGACGGACTCTTGGAATTCTGTCTGATTCCCATGTGGAACAATGGGGGCCCAACAAATGTCTaGCTGTCCTCGGGCCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RDGDGLLEFCLIPMWNNGGPTNV*LSSGPL Trigger: CAAAGGGCCCGAGGACAGGCAGACATTTGTTGGGCC...CCCATTGTTCCACATGGGAATCAGACAGAATTCCAAGAGTCCGTCACCATCCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| 3UTR CAA 72 bp | CATGTGGAACAATGGGTGCCTCAGTCACCTGGCCCATaGAAGTCACAGTCGCTGGTGAAGGTAATCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HVEQWVPQSPGP*KSQSLVKVIWS Trigger: GGACCAGATTACCTTCACCAGCGACTGTGACTTCAATGGGCCAGGTGACTGAGGCACCCATTGTTCCACATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS-3UTR CCA 90 bp | CTGTCTGATTCCCATGTGGAACAATGGGTGCCTCAGTCACCTGGCCCATTGAAGACTGCTTCTAAGGCGTaGAAGATGGCCTGGCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSDSHVEQWVPQSPGPLKTASKA*KMAWLP Trigger: AGGAAGCCAGGCCATCTTCCACGCCTTAGAAGCAGT...CTTCAATGGGCCAGGTGACTGAGGCACCCATTGTTCCACATGGGAATCAGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS-3UTR CCA 90 bp | CTGTCTGATTCCCATGTGGAACAATGGGTGCCTCAGTCACCTGGCCCATTGAAGACTACAGGAGTTCCCTaGACTGAGAGGTCCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSDSHVEQWVPQSPGPLKTTGVP*TERSQS Trigger: AGACTGGGACCTCTCAGTCCAGGGAACTCCTGTAGT...CTTCAATGGGCCAGGTGACTGAGGCACCCATTGTTCCACATGGGAATCAGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS-3UTR TCA 90 bp | CCCCAAGAGAGAAGCCCAGGGCCCCAGGTATTCTGCCTCATATGTCACCAACCACTCAGATGCATGTCATaGGAAGATGGTTTTACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PQERSPGPQVFCLICHQPLRCMS*EDGFTF Trigger: GAAAGTAAAACCATCTTCTCATGACATGCATCTGAG...TGGTTGGTGACATATGAGGCAGAATACCTGGGGCCCTGGGCTTCTCTCTTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS-3UTR CCA 90 bp | GCAGCTCAACTGCCTGGAACTTGGTGGATTGAGGTCCAACAAAAATATTTCTCCCTAAGGCGTGGAAGATaGCCTGGCTTCCTCTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AAQLPGTWWIEVQQKYFSLRRGR*PGFLLP Trigger: TGGCAAGAGGAAGCCAGGCCATCTTCCACGCCTTAG...GGAGAAATATTTTTGTTGGACCTCAATCCACCAAGTTCCAGGCAGTTGAGCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS-3UTR GCA 90 bp | GAACAATGGGTGCCTCAGTCACCTGGCCCATTGAAGTCACAGTCGCTGGTGAAGGAGACTTTTTCTTCTTaGTTTCGAGCCTTGTTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: EQWVPQSPGPLKSQSLVKETFSS*FRALLS Trigger: GCTTAACAAGGCTCGAAAGCAAGAAGAAAAAGTCTC...CTTCACCAGCGACTGTGACTTCAATGGGCCAGGTGACTGAGGCACCCATTGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS-3UTR GCA 90 bp | GCAGCTCAACTGCCTGGAACTTGGTGGATTGAGGTCCAACAAAAATATTTCTCCGACATCTCCATAGCCTaGATCCTCCTCCTCCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: AAQLPGTWWIEVQQKYFSDISIA*ILLLLL Trigger: CAAGAGGAGGAGGAGGATGCAGGCTATGGAGATGTC...GGAGAAATATTTTTGTTGGACCTCAATCCACCAAGTTCCAGGCAGTTGAGCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS-3UTR CCA 90 bp | TATCTTCAATTCTTGCTTTCACATGGAATACACGGGATGGTGACGGACTCTTGGTTGTCTCCCCCTAGATaGCCCCTCCTCCATTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: YLQFLLSHGIHGMVTDSWLSPPR*PLLHSS Trigger: TGAGGAATGGAGGAGGGGCCATCTAGGGGGAGACAA...CCAAGAGTCCGTCACCATCCCGTGTATTCCATGTGAAAGCAAGAATTGAAGATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| 3UTR CAA 72 bp | GCTTTCACATGGAATACACGGGATGGTGACGGACTCTaGGAATTCTGTCTGATTCCCATGTGGAACAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: AFTWNTRDGDGL*EFCLIPMWNNG Trigger: CCCATTGTTCCACATGGGAATCAGACAGAATTCCAAGAGTCCGTCACCATCCCGTGTATTCCATGTGAAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS-3UTR TCA 90 bp | GTGAAGGTAATCTGGTCCTCGTTCCTGTATTGTGCTCGAGCAGGATGCAGAGAACCTGAAAGGTTCTTGTaGTATGAGTCCTGTGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VKVIWSSFLYCARAGCREPERFL*YESCVV Trigger: GACAACACAGGACTCATATCACAAGAACCTTTCAGG...TTCTCTGCATCCTGCTCGAGCACAATACAGGAACGAGGACCAGATTACCTTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS-3UTR TCA 90 bp | GAACAATGGGTGCCTCAGTCACCTGGCCCATTGAAGTCACAGTCGCTGGTGAAGTTCTGCCTTTGGCATTaGTTTAGGTTTAAAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EQWVPQSPGPLKSQSLVKFCLWH*FRFKAS Trigger: AGAAGCTTTAAACCTAAATCAATGCCAAAGGCAGAA...CTTCACCAGCGACTGTGACTTCAATGGGCCAGGTGACTGAGGCACCCATTGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS-3UTR TCA 90 bp | GCAGCTCAACTGCCTGGAACTTGGTGGATTGAGGTCCAACAAAAATATTTCTCCCGCCCATCTCTGGAATaGAATATTTCAGCACAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: AAQLPGTWWIEVQQKYFSRPSLE*NISAQP Trigger: GGGCTGTGCTGAAATATTTCATTCCAGAGATGGGCG...GGAGAAATATTTTTGTTGGACCTCAATCCACCAAGTTCCAGGCAGTTGAGCTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS-3UTR GCA 90 bp | TCGCTGGTGAAGGTAATCTGGTCCTCGTTCCTGTATTGTGCTCGAGCAGGATGCTCAAGGCTCATTGGTTaGTGTTTCAGATGTTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLVKVIWSSFLYCARAGCSRLIG*CFRCFL Trigger: CAAGAAACATCTGAAACAGCAACCAATGAGCCTTGA...GCATCCTGCTCGAGCACAATACAGGAACGAGGACCAGATTACCTTCACCAGCGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS-3UTR GCA 90 bp | TCGCTGGTGAAGGTAATCTGGTCCTCGTTCCTGTATTGTGCTCGAGCAGGATGCCAACAGTTGACATTGTaGCTTCTTTCCAAGACGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLVKVIWSSFLYCARAGCQQLTL*LLSKTF Trigger: AAACGTCTTGGAAAGAAGGCACAATGTCAACTGTTG...GCATCCTGCTCGAGCACAATACAGGAACGAGGACCAGATTACCTTCACCAGCGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS-3UTR TCA 90 bp | CTCTTGGAATTCTGTCTGATTCCCATGTGGAACAATGGGTGCCTCAGTCACCTGGTTACTTCCAACAGTTaGCATTGTGCCTTCTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLEFCLIPMWNNGCLSHLVTSNS*HCAFFP Trigger: TGGAAAGAAGGCACAATGTCAACTGTTGGAAGTAAC...CAGGTGACTGAGGCACCCATTGTTCCACATGGGAATCAGACAGAATTCCAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS-3UTR CCA 90 bp | CGGGATGGTGACGGACTCTTGGAATTCTGTCTGATTCCCATGTGGAACAATGGGTACATCGCCCATCTCTaGAATGAAATATTTCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RDGDGLLEFCLIPMWNNGYIAHL*NEIFQH Trigger: GTGCTGAAATATTTCATTCCAGAGATGGGCGATGTA...CCCATTGTTCCACATGGGAATCAGACAGAATTCCAAGAGTCCGTCACCATCCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS-3UTR CCA 90 bp | CGGGATGGTGACGGACTCTTGGAATTCTGTCTGATTCCCATGTGGAACAATGGGCAGATGTTTCTTGCATaGGTGTGTGTTGTTAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: RDGDGLLEFCLIPMWNNGQMFLA*VCVVNK Trigger: TTTATTAACAACACACACCCATGCAAGAAACATCTG...CCCATTGTTCCACATGGGAATCAGACAGAATTCCAAGAGTCCGTCACCATCCCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS-3UTR CCA 90 bp | CTCTTGGAATTCTGTCTGATTCCCATGTGGAACAATGGGTGCCTCAGTCACCTGCATGTCATGAGAAGATaGTTTTACTTTCTCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLEFCLIPMWNNGCLSHLHVMRR*FYFLSA Trigger: AGCAGAGAGAAAGTAAAACCATCTTCTCATGACATG...CAGGTGACTGAGGCACCCATTGTTCCACATGGGAATCAGACAGAATTCCAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS-3UTR GCA 90 bp | CTGGAGTGTCCAGGAAATTACTGTAGCAGCTCAACTGCCTGGAACTTGGTGGATGTTTTACTTTCTCTCTaGTTAGGAAGACTGCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LECPGNYCSSSTAWNLVDVLLSL*LGRLLF Trigger: AAAAAGCAGTCTTCCTAAGCAGAGAGAAAGTAAAAC...ATCCACCAAGTTCCAGGCAGTTGAGCTGCTACAGTAATTTCCTGGACACTCCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS-3UTR CCA 90 bp | GCAGCTCAACTGCCTGGAACTTGGTGGATTGAGGTCCAACAAAAATATTTCTCCTTCCTCAAGGCTCATTaGTTGCTGTTTCAGATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: AAQLPGTWWIEVQQKYFSFLKAH*LLFQMF Trigger: AAACATCTGAAACAGCAACCAATGAGCCTTGAGGAA...GGAGAAATATTTTTGTTGGACCTCAATCCACCAAGTTCCAGGCAGTTGAGCTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS-3UTR CAA 90 bp | TCCCATGTGGAACAATGGGTGCCTCAGTCACCTGGCCCATTGAAGTCACAGTCGTCAGGGGCATGGCCCTaGACAGCACTGCTTCTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SHVEQWVPQSPGPLKSQSSGAWP*TALLLR Trigger: CCTTAGAAGCAGTGCTGTCAAGGGCCATGCCCCTGA...CGACTGTGACTTCAATGGGCCAGGTGACTGAGGCACCCATTGTTCCACATGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS CCA 90 bp | CAGGCTACACTGAGGCTGATGATCATCCAGATCCGGTCTACTTCCTaGGATGACCCTGAGGTCATCAACCTCCTGGGTTACCAACCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: QATLRLMIIQIRSTS*DDPEVINLLGYQPR Trigger: TCGAGGTTGGTAACCCAGGAGGTTGATGACCTCAGGGTCATCCCAGGAAGTAGACCGGATCTGGATGATCATCAGCCTCAGTGTAGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS-3UTR CAA 90 bp | CTGGAGTGTCCAGGAAATTACTGTAGCAGCTCAACTGCCTGGAACTTGGTGGATATCCTCCTCCTCCTCTaGAGGACCTCCAGGCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LECPGNYCSSSTAWNLVDILLLL*RTSRLA Trigger: AGCCAGCCTGGAGGTCCTCAAGAGGAGGAGGAGGAT...ATCCACCAAGTTCCAGGCAGTTGAGCTGCTACAGTAATTTCCTGGACACTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS-3UTR CAA 90 bp | CCCCAAGAGAGAAGCCCAGGGCCCCAGGTATTCTGCCTCATATGTCACCAACCATGTTTCAGATGTTTCTaGCATGGGTGTGTGTTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: PQERSPGPQVFCLICHQPCFRCF*HGCVLL Trigger: TAACAACACACACCCATGCAAGAAACATCTGAAACA...TGGTTGGTGACATATGAGGCAGAATACCTGGGGCCCTGGGCTTCTCTCTTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS-3UTR CAA 90 bp | TCGCTGGTGAAGGTAATCTGGTCCTCGTTCCTGTATTGTGCTCGAGCAGGATGCTTCCAACAGTTGACATaGTGCCTTCTTTCCAAGACG | + |
|
Preference number: 5 (lower is better) Translates to: SLVKVIWSSFLYCARAGCFQQLT*CLLSKT Trigger: CGTCTTGGAAAGAAGGCACAATGTCAACTGTTGGAA...GCATCCTGCTCGAGCACAATACAGGAACGAGGACCAGATTACCTTCACCAGCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS GCA 90 bp | TCTCCCCCTAGATGGCCCCTCCTCCATTCCTCAAGGCTCATTGGTTaGTGTTTCAGATGTTTCTTGCATGGGTGTGTGTTGTTAATAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SPPRWPLLHSSRLIG*CFRCFLHGCVLLIN Trigger: GTTTATTAACAACACACACCCATGCAAGAAACATCTGAAACAGCAACCAATGAGCCTTGAGGAATGGAGGAGGGGCCATCTAGGGGGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS-3UTR CAA 90 bp | GGTCCTCGTTCCTGTATTGTGCTCGAGCAGGATGCAGAGAAAGTGTCTACTCTCTTGCATGGGTGTGTGTaGTTAATAAACACCTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: GPRSCIVLEQDAEKVSTLLHGCV*LINTSC Trigger: GCAAGAGGTGTTTATTAACAACACACACCCATGCAA...GAGAGTAGACACTTTCTCTGCATCCTGCTCGAGCACAATACAGGAACGAGGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS GCA 90 bp | CAGTGCTCAGATGCATGTCATGAGAAGATGGTTTTACTTTCTCTCTaGTTAGGAAGACTGCTTTTTCTTGACCGAGTCCTCTGTCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: QCSDACHEKMVLLSL*LGRLLFLDRVLCPE Trigger: CTCAGGACAGAGGACTCGGTCAAGAAAAAGCAGTCTTCCTAAGCAGAGAGAAAGTAAAACCATCTTCTCATGACATGCATCTGAGCACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS CCA 90 bp | CCATTCCTCAAGGCTCATTGGTTGCTGTTTCAGATGTTTCTTGCATaGGTGTGTGTTGTTAATAAACACCTCTTGCTTCGGGAGCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PFLKAHWLLFQMFLA*VCVVNKHLLLRELS Trigger: AGACAGCTCCCGAAGCAAGAGGTGTTTATTAACAACACACACCCATGCAAGAAACATCTGAAACAGCAACCAATGAGCCTTGAGGAATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS GCA 90 bp | TTCGGGAGCTGTCTGATATCTAGTAGGTTTGAGACTTTTTCTTCTTaGTTTCGAGCCTTGTTAAGCAACTCCATTGTCCTCTTCTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: FGSCLISSRFETFSS*FRALLSNSIVLFFP Trigger: AGGGAAGAAGAGGACAATGGAGTTGCTTAACAAGGCTCGAAAGCAAGAAGAAAAAGTCTCAAACCTACTAGATATCAGACAGCTCCCGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS-3UTR CAA 90 bp | ATCCAATTGACTGATAATCTCGTCACACTTGACAAGACTCTATTTTGTTCTCCTCTCAAGGCTCATTGGTaGCTGTTTCAGATGTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: IQLTDNLVTLDKTLFCSPLKAHW*LFQMFL Trigger: AAGAAACATCTGAAACAGCAACCAATGAGCCTTGAG...AGGAGAACAAAATAGAGTCTTGTCAAGTGTGACGAGATTATCAGTCAATTGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS-3UTR CAA 90 bp | ATCCAATTGACTGATAATCTCGTCACACTTGACAAGACTCTATTTTGTTCTCCTCCCTTAAAGATTCTTTaGGAGACTATAGACAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: IQLTDNLVTLDKTLFCSPPLKIL*ETIDKL Trigger: AAGCTTGTCTATAGTCTCCAAAAGAATCTTTAAGGG...AGGAGAACAAAATAGAGTCTTGTCAAGTGTGACGAGATTATCAGTCAATTGGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS CCA 72 bp | AGGGGCATGGCCCTTGACAGCACTGCTTCTAAGGCGTaGAAGATGGCCTGGCTTCCTCTTGCCATGAGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: RGMALDSTASKA*KMAWLPLAMSS Trigger: ACTGCTCATGGCAAGAGGAAGCCAGGCCATCTTCCACGCCTTAGAAGCAGTGCTGTCAAGGGCCATGCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS CAA 72 bp | GTCCTCTTCTTCCCTTGGGCCTCCCCTGCTGTTGCTTaGGGGCTAATCTTTGGCAAGCCACTGGGCCCAACA | + |
|
Preference number: 6 (lower is better) Translates to: VLFFPWASPAVA*GLIFGKPLGPT Trigger: TGTTGGGCCCAGTGGCTTGCCAAAGATTAGCCCCAAAGCAACAGCAGGGGAGGCCCAAGGGAAGAAGAGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS CCA 72 bp | CTACTTCCTGGGATGACCCTGAGGTCATCAACCTCCTaGGTTACCAACCTCGACCCAGTGGCCAATCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: LLPGMTLRSSTS*VTNLDPVANPE Trigger: CTCTGGATTGGCCACTGGGTCGAGGTTGGTAACCCAGGAGGTTGATGACCTCAGGGTCATCCCAGGAAGTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS CCA 72 bp | TTGGGCCTCCCCTGCTGTTGCTTTGGGGCTAATCTTTaGCAAGCCACTGGGCCCAACAAATGTCTGCCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: LGLPCCCFGANL*QATGPNKCLPV Trigger: GACAGGCAGACATTTGTTGGGCCCAGTGGCTTGCCAAAGATTAGCCCCAAAGCAACAGCAGGGGAGGCCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS CAA 90 bp | AACTCCATTGTCCTCTTCTTCCCTTGGGCCTCCCCTGCTGTTGCTTaGGGGCTAATCTTTGGCAAGCCACTGGGCCCAACAAATGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: NSIVLFFPWASPAVA*GLIFGKPLGPTNVC Trigger: GCAGACATTTGTTGGGCCCAGTGGCTTGCCAAAGATTAGCCCCAAAGCAACAGCAGGGGAGGCCCAAGGGAAGAAGAGGACAATGGAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS CCA 72 bp | CTGAGGCTGATGATCATCCAGATCCGGTCTACTTCCTaGGATGACCCTGAGGTCATCAACCTCCTGGGTTAC | + |
|
Preference number: 6 (lower is better) Translates to: LRLMIIQIRSTS*DDPEVINLLGY Trigger: GTAACCCAGGAGGTTGATGACCTCAGGGTCATCCCAGGAAGTAGACCGGATCTGGATGATCATCAGCCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS CCA 72 bp | CTGTGGTCCCGAACTGTAAGCACTACAGGAGTTCCCTaGACTGAGAGGTCCCAGTCTTCTGCCTTTGGCATT | + |
|
Preference number: 6 (lower is better) Translates to: LWSRTVSTTGVP*TERSQSSAFGI Trigger: AATGCCAAAGGCAGAAGACTGGGACCTCTCAGTCCAGGGAACTCCTGTAGTGCTTACAGTTCGGGACCACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS CAA 72 bp | ATAGACAAGCTTGGATTAGGGTCAGGGGCATGGCCCTaGACAGCACTGCTTCTAAGGCGTGGAAGATGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: IDKLGLGSGAWP*TALLLRRGRWP Trigger: AGGCCATCTTCCACGCCTTAGAAGCAGTGCTGTCAAGGGCCATGCCCCTGACCCTAATCCAAGCTTGTCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS CCA 72 bp | GAGACTATAGACAAGCTTGGATTAGGGTCAGGGGCATaGCCCTTGACAGCACTGCTTCTAAGGCGTGGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: ETIDKLGLGSGA*PLTALLLRRGR Trigger: TCTTCCACGCCTTAGAAGCAGTGCTGTCAAGGGCCATGCCCCTGACCCTAATCCAAGCTTGTCTATAGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS CCA 72 bp | TCTTGTGATATGAGTCCTGTGTTGTCTCCCCCTAGATaGCCCCTCCTCCATTCCTCAAGGCTCATTGGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: SCDMSPVLSPPR*PLLHSSRLIGC Trigger: GCAACCAATGAGCCTTGAGGAATGGAGGAGGGGCCATCTAGGGGGAGACAACACAGGACTCATATCACAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS CAA 72 bp | CCCCTAGATGGCCCCTCCTCCATTCCTCAAGGCTCATaGGTTGCTGTTTCAGATGTTTCTTGCATGGGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: PLDGPSSIPQGS*VAVSDVSCMGV Trigger: CACACCCATGCAAGAAACATCTGAAACAGCAACCAATGAGCCTTGAGGAATGGAGGAGGGGCCATCTAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS CAA 90 bp | TTGCTTTCGAGCCTTGTTAAGCAACTCCATTGTCCTCTTCTTCCCTaGGGCCTCCCCTGCTGTTGCTTTGGGGCTAATCTTTGGCAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LLSSLVKQLHCPLLP*GLPCCCFGANLWQA Trigger: GGCTTGCCAAAGATTAGCCCCAAAGCAACAGCAGGGGAGGCCCAAGGGAAGAAGAGGACAATGGAGTTGCTTAACAAGGCTCGAAAGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS CAA 90 bp | CTGTCCTCGGGCCCTTTGATCACAGATTCGCCCTTAAAGATTCTTTaGGAGACTATAGACAAGCTTGGATTAGGGTCAGGGGCATGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: LSSGPLITDSPLKIL*ETIDKLGLGSGAWP Trigger: GGGCCATGCCCCTGACCCTAATCCAAGCTTGTCTATAGTCTCCAAAAGAATCTTTAAGGGCGAATCTGTGATCAAAGGGCCCGAGGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS GCA 72 bp | AGATGGCCCCTCCTCCATTCCTCAAGGCTCATTGGTTaGTGTTTCAGATGTTTCTTGCATGGGTGTGTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: RWPLLHSSRLIG*CFRCFLHGCVL Trigger: CAACACACACCCATGCAAGAAACATCTGAAACAGCAACCAATGAGCCTTGAGGAATGGAGGAGGGGCCATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS CCA 72 bp | GCCCTTAAAGATTCTTTTGGAGACTATAGACAAGCTTaGATTAGGGTCAGGGGCATGGCCCTTGACAGCACT | + |
|
Preference number: 6 (lower is better) Translates to: ALKDSFGDYRQA*IRVRGMALDST Trigger: AGTGCTGTCAAGGGCCATGCCCCTGACCCTAATCCAAGCTTGTCTATAGTCTCCAAAAGAATCTTTAAGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS CAA 90 bp | CTGATATCTAGTAGGTTTGAGACTTTTTCTTCTTGCTTTCGAGCCTaGTTAAGCAACTCCATTGTCCTCTTCTTCCCTTGGGCCTCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: LISSRFETFSSCFRA*LSNSIVLFFPWASP Trigger: AGGGGAGGCCCAAGGGAAGAAGAGGACAATGGAGTTGCTTAACAAGGCTCGAAAGCAAGAAGAAAAAGTCTCAAACCTACTAGATATCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS CAA 72 bp | GGCCCTTTGATCACAGATTCGCCCTTAAAGATTCTTTaGGAGACTATAGACAAGCTTGGATTAGGGTCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GPLITDSPLKIL*ETIDKLGLGSG Trigger: CCCTGACCCTAATCCAAGCTTGTCTATAGTCTCCAAAAGAATCTTTAAGGGCGAATCTGTGATCAAAGGGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS CAA 72 bp | GGTTGCTGTTTCAGATGTTTCTTGCATGGGTGTGTGTaGTTAATAAACACCTCTTGCTTCGGGAGCTGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: GCCFRCFLHGCV*LINTSCFGSCL Trigger: CAGACAGCTCCCGAAGCAAGAGGTGTTTATTAACAACACACACCCATGCAAGAAACATCTGAAACAGCAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS CAA 90 bp | AGGCTCATTGGTTGCTGTTTCAGATGTTTCTTGCATGGGTGTGTGTaGTTAATAAACACCTCTTGCTTCGGGAGCTGTCTGATATCTAGT | + |
|
Preference number: 6 (lower is better) Translates to: RLIGCCFRCFLHGCV*LINTSCFGSCLISS Trigger: ACTAGATATCAGACAGCTCCCGAAGCAAGAGGTGTTTATTAACAACACACACCCATGCAAGAAACATCTGAAACAGCAACCAATGAGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS GCA 72 bp | TTCTTGCATGGGTGTGTGTTGTTAATAAACACCTCTTaGTTCGGGAGCTGTCTGATATCTAGTAGGTTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: FLHGCVLLINTS*FGSCLISSRFE Trigger: CTCAAACCTACTAGATATCAGACAGCTCCCGAAGCAAGAGGTGTTTATTAACAACACACACCCATGCAAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS GCA 72 bp | GATGCATGTCATGAGAAGATGGTTTTACTTTCTCTCTaGTTAGGAAGACTGCTTTTTCTTGACCGAGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: DACHEKMVLLSL*LGRLLFLDRVL Trigger: GAGGACTCGGTCAAGAAAAAGCAGTCTTCCTAAGCAGAGAGAAAGTAAAACCATCTTCTCATGACATGCATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS CCA 72 bp | AAGGCTCATTGGTTGCTGTTTCAGATGTTTCTTGCATaGGTGTGTGTTGTTAATAAACACCTCTTGCTTCGG | + |
|
Preference number: 6 (lower is better) Translates to: KAHWLLFQMFLA*VCVVNKHLLLR Trigger: CCGAAGCAAGAGGTGTTTATTAACAACACACACCCATGCAAGAAACATCTGAAACAGCAACCAATGAGCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS CAA 72 bp | AGTAGGTTTGAGACTTTTTCTTCTTGCTTTCGAGCCTaGTTAAGCAACTCCATTGTCCTCTTCTTCCCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: SRFETFSSCFRA*LSNSIVLFFPW Trigger: CCAAGGGAAGAAGAGGACAATGGAGTTGCTTAACAAGGCTCGAAAGCAAGAAGAAAAAGTCTCAAACCTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS CAA 72 bp | TCCTCAAGGCTCATTGGTTGCTGTTTCAGATGTTTCTaGCATGGGTGTGTGTTGTTAATAAACACCTCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: SSRLIGCCFRCF*HGCVLLINTSC Trigger: GCAAGAGGTGTTTATTAACAACACACACCCATGCAAGAAACATCTGAAACAGCAACCAATGAGCCTTGAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS TCA 72 bp | TTAAAGCTTCTTTCAGCAGTGCTCAGATGCATGTCATaGGAAGATGGTTTTACTTTCTCTCTGCTTAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LKLLSAVLRCMS*EDGFTFSLLRK Trigger: CTTCCTAAGCAGAGAGAAAGTAAAACCATCTTCTCATGACATGCATCTGAGCACTGCTGAAAGAAGCTTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS GCA 72 bp | TGTCTGATATCTAGTAGGTTTGAGACTTTTTCTTCTTaGTTTCGAGCCTTGTTAAGCAACTCCATTGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: CLISSRFETFSS*FRALLSNSIVL Trigger: GAGGACAATGGAGTTGCTTAACAAGGCTCGAAAGCAAGAAGAAAAAGTCTCAAACCTACTAGATATCAGACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||
| CDS TCA 72 bp | GTAATCTTTCATTACTGGAAATTAATGAAAGTCTCCTaGCTTTTAGAAAGGTGGAATTCAGGCTTTGGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: VIFHYWKLMKVS*LLERWNSGFGN Trigger: GTTCCCAAAGCCTGAATTCCACCTTTCTAAAAGTCAGGAGACTTTCATTAATTTCCAGTAATGAAAGATTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095375.5 |
||