Pregenerated sensors for TEX21 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000021056

Ensembl transcript IDs: ENSMUST00000021453.6, ENSMUST00000218426.2, ENSMUST00000219327.2

Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	GCCCTGACTGTGGAAGGGTCTGGAAGGCTCTGGGCTGGCGTCTGGTaGGCCCTCTCCTTTTCTGGTCTTGCTCCCTGCTCCGCAGGATCT	+
Preference number: 5 (lower is better) Translates to: ALTVEGSGRLWAGVW*ALSFSGLAPCSAGS Trigger: AGATCCTGCGGAGCAGGGAGCAAGACCAGAAAAGGAGAGGGCCCACCAGACGCCAGCCCAGAGCCTTCCAGACCCTTCCACAGTCAGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021453.6 ENSMUST00000218426.2
CDS TCA 90 bp	CAGCAAGCTCTTGCTCTCGTCCTGAGAGCCCTTTCAGCACAGCCCTaGCTGTGGAAGGGTCTGGAAGGCTCTGGGCTGGCGTCTGGTGGG	+
Preference number: 5 (lower is better) Translates to: QQALALVLRALSAQP*LWKGLEGSGLASGG Trigger: CCCACCAGACGCCAGCCCAGAGCCTTCCAGACCCTTCCACAGTCAGGGCTGTGCTGAAAGGGCTCTCAGGACGAGAGCAAGAGCTTGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021453.6
CDS TCA 90 bp	AAGAGACCTCTTGCTCTCGTCCTGAGAGCCCTTTCAGCACAGCCCTaGCTGTGGAAGGGTCTGGAAGGCTCTGGGCTGGCGTCTGGTGGG	+
Preference number: 5 (lower is better) Translates to: KRPLALVLRALSAQP*LWKGLEGSGLASGG Trigger: CCCACCAGACGCCAGCCCAGAGCCTTCCAGACCCTTCCACAGTCAGGGCTGTGCTGAAAGGGCTCTCAGGACGAGAGCAAGAGGTCTCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218426.2
CDS TCA 90 bp	CTTCATGATGGCTTCCCGGAAGTCAGCAAGCTCTTGCTCTCGTCCTaGGAGCCCTTTCAGCACAGCCCTGACTGTGGAAGGGTCTGGAAG	+
Preference number: 5 (lower is better) Translates to: LHDGFPEVSKLLLSS*EPFQHSPDCGRVWK Trigger: CTTCCAGACCCTTCCACAGTCAGGGCTGTGCTGAAAGGGCTCTCAGGACGAGAGCAAGAGCTTGCTGACTTCCGGGAAGCCATCATGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021453.6
CDS GCA 90 bp	AAACAAGCCACTGGGACATTTTCCCGAGCCGATAGATGTGATAGGTaGCTGGCTTCTGGTGGCTTAGCCTCACAGGCCTCTTTGGTTTGG	+
Preference number: 5 (lower is better) Translates to: KQATGTFSRADRCDR*LASGGLASQASLVW Trigger: CCAAACCAAAGAGGCCTGTGAGGCTAAGCCACCAGAAGCCAGGCACCTATCACATCTATCGGCTCGGGAAAATGTCCCAGTGGCTTGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021453.6 ENSMUST00000218426.2 ENSMUST00000219327.2
CDS GCA 90 bp	TTCCTGCTGCAGGGCTTCAGCCTTGCATTTCCACGACTGTTCATTTaGACCCATTTCCTGGATCCTCTCTTTCACCGCTTCCTCTGTGGC	+
Preference number: 5 (lower is better) Translates to: FLLQGFSLAFPRLFI*THFLDPLFHRFLCG Trigger: GCCACAGAGGAAGCGGTGAAAGAGAGGATCCAGGAAATGGGTGCAAATGAACAGTCGTGGAAATGCAAGGCTGAAGCCCTGCAGCAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021453.6 ENSMUST00000218426.2
CDS TCA 90 bp	AGTTTTCTTTCTTCCTGCCCACATCTAAGTTCCTCAGAGAGCAGCTaGCAGCAACCTTTCCTTCCAGGGGTCCCAAGGGTCTTTCCTGTT	+
Preference number: 5 (lower is better) Translates to: SFLSSCPHLSSSESS*QQPFLPGVPRVFPV Trigger: AACAGGAAAGACCCTTGGGACCCCTGGAAGGAAAGGTTGCTGTCAGCTGCTCTCTGAGGAACTTAGATGTGGGCAGGAAGAAAGAAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021453.6 ENSMUST00000218426.2
CDS CCA 90 bp	AAGGTCAGGATGGACTGGGTCGGCTGCCTTTTTGTTGTGTATGATTaGGTTCCCGGTAGGATCCATTTCAAGAGGTGGATCAAAACAAGC	+
Preference number: 5 (lower is better) Translates to: KVRMDWVGCLFVVYD*VPGRIHFKRWIKTS Trigger: GCTTGTTTTGATCCACCTCTTGAAATGGATCCTACCGGGAACCCAATCATACACAACAAAAAGGCAGCCGACCCAGTCCATCCTGACCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021453.6 ENSMUST00000218426.2 ENSMUST00000219327.2
CDS CCA 90 bp	TCCAATAACATCTCTAACTTTTTGAACTTGCTGTGTTTATCTATGTaGGCAGTCCGGGTCCTGGAGTTTTCTTTCTTCCTGCCCACATCT	+
Preference number: 5 (lower is better) Translates to: SNNISNFLNLLCLSM*AVRVLEFSFFLPTS Trigger: AGATGTGGGCAGGAAGAAAGAAAACTCCAGGACCCGGACTGCCCACATAGATAAACACAGCAAGTTCAAAAAGTTAGAGATGTTATTGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021453.6 ENSMUST00000218426.2
CDS CCA 90 bp	GATCAAATCTTGCTGACATTTATCACCAGTAGTTTGCCCATCAATTaGTCCCTCAGAGTAAACAACACTGCCTCTCTTCAAATTGTAGAC	+
Preference number: 5 (lower is better) Translates to: DQILLTFITSSLPIN*SLRVNNTASLQIVD Trigger: GTCTACAATTTGAAGAGAGGCAGTGTTGTTTACTCTGAGGGACCAATTGATGGGCAAACTACTGGTGATAAATGTCAGCAAGATTTGATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021453.6 ENSMUST00000218426.2
CDS GCA 90 bp	ACTCAGCCTTCACCTCTTGCAAAGACGTTTCTTTCACATAGAGCTTaGTTTGAAGATTTCTCAGCTCAGCTAAAAGAGTCTTGTTTTTCA	+
Preference number: 5 (lower is better) Translates to: TQPSPLAKTFLSHRA*FEDFSAQLKESCFS Trigger: TGAAAAACAAGACTCTTTTAGCTGAGCTGAGAAATCTTCAAAGCAAGCTCTATGTGAAAGAAACGTCTTTGCAAGAGGTGAAGGCTGAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021453.6 ENSMUST00000218426.2 ENSMUST00000219327.2
CDS TCA 72 bp	CTTGCTCTCGTCCTGAGAGCCCTTTCAGCACAGCCCTaGCTGTGGAAGGGTCTGGAAGGCTCTGGGCTGGCG	+
Preference number: 6 (lower is better) Translates to: LALVLRALSAQP*LWKGLEGSGLA Trigger: CGCCAGCCCAGAGCCTTCCAGACCCTTCCACAGTCAGGGCTGTGCTGAAAGGGCTCTCAGGACGAGAGCAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021453.6 ENSMUST00000218426.2
CDS CCA 72 bp	ACTGTGGAAGGGTCTGGAAGGCTCTGGGCTGGCGTCTaGTGGGCCCTCTCCTTTTCTGGTCTTGCTCCCTGC	+
Preference number: 6 (lower is better) Translates to: TVEGSGRLWAGV*WALSFSGLAPC Trigger: GCAGGGAGCAAGACCAGAAAAGGAGAGGGCCCACCAGACGCCAGCCCAGAGCCTTCCAGACCCTTCCACAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021453.6 ENSMUST00000218426.2
CDS TCA 72 bp	GGCTTCCCGGAAGTCAGCAAGCTCTTGCTCTCGTCCTaGGAGCCCTTTCAGCACAGCCCTGACTGTGGAAGG	+
Preference number: 6 (lower is better) Translates to: GFPEVSKLLLSS*EPFQHSPDCGR Trigger: CCTTCCACAGTCAGGGCTGTGCTGAAAGGGCTCTCAGGACGAGAGCAAGAGCTTGCTGACTTCCGGGAAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021453.6
CDS CCA 72 bp	CCGGTCCTTTCAGATTCATATAGGGCGAGAAGCTGCTaGGGCAGGACCGCCTCTTCTCCAGAAGCTCCGCCT	+
Preference number: 6 (lower is better) Translates to: PVLSDSYRARSC*GRTASSPEAPP Trigger: AGGCGGAGCTTCTGGAGAAGAGGCGGTCCTGCCCCAGCAGCTTCTCGCCCTATATGAATCTGAAAGGACCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021453.6 ENSMUST00000218426.2
CDS GCA 72 bp	CTTCCGGTCCTTTCAGATTCATATAGGGCGAGAAGCTaGTGGGGCAGGACCGCCTCTTCTCCAGAAGCTCCG	+
Preference number: 6 (lower is better) Translates to: LPVLSDSYRARS*WGRTASSPEAP Trigger: CGGAGCTTCTGGAGAAGAGGCGGTCCTGCCCCAGCAGCTTCTCGCCCTATATGAATCTGAAAGGACCGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021453.6 ENSMUST00000218426.2
CDS CAA 90 bp	ACTCAGGAGAGTGGCCAACTGACCGAGGAAATCCTGGTGATGGGATaGCTCAGGTGTGGTTTCCCAGCCGCAGGAAAACGGAGCTCTGTC	+
Preference number: 6 (lower is better) Translates to: TQESGQLTEEILVMG*LRCGFPAAGKRSSV Trigger: GACAGAGCTCCGTTTTCCTGCGGCTGGGAAACCACACCTGAGCAATCCCATCACCAGGATTTCCTCGGTCAGTTGGCCACTCTCCTGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021453.6 ENSMUST00000218426.2
CDS GCA 72 bp	ATCTTCATGATGGCTTCCCGGAAGTCAGCAAGCTCTTaGTCTCGTCCTGAGAGCCCTTTCAGCACAGCCCTG	+
Preference number: 6 (lower is better) Translates to: IFMMASRKSASS*SRPESPFSTAL Trigger: CAGGGCTGTGCTGAAAGGGCTCTCAGGACGAGAGCAAGAGCTTGCTGACTTCCGGGAAGCCATCATGAAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021453.6
CDS GCA 72 bp	TGCTCAAGTCTCTTGGTGAGCGTCTGGATTTCCTGCTaGAGGGCTTCAGCCTTGCATTTCCACGACTGTTCA	+
Preference number: 6 (lower is better) Translates to: CSSLLVSVWISC*RASALHFHDCS Trigger: TGAACAGTCGTGGAAATGCAAGGCTGAAGCCCTGCAGCAGGAAATCCAGACGCTCACCAAGAGACTTGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021453.6 ENSMUST00000218426.2
CDS CAA 72 bp	CTGGCAAGGTCAGGATGGACTGGGTCGGCTGCCTTTTaGTTGTGTATGATTGGGTTCCCGGTAGGATCCATT	+
Preference number: 6 (lower is better) Translates to: LARSGWTGSAAF*LCMIGFPVGSI Trigger: AATGGATCCTACCGGGAACCCAATCATACACAACAAAAAGGCAGCCGACCCAGTCCATCCTGACCTTGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021453.6 ENSMUST00000218426.2 ENSMUST00000219327.2
CDS CAA 72 bp	GTGAGCGTCTGGATTTCCTGCTGCAGGGCTTCAGCCTaGCATTTCCACGACTGTTCATTTGCACCCATTTCC	+
Preference number: 6 (lower is better) Translates to: VSVWISCCRASA*HFHDCSFAPIS Trigger: GGAAATGGGTGCAAATGAACAGTCGTGGAAATGCAAGGCTGAAGCCCTGCAGCAGGAAATCCAGACGCTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021453.6 ENSMUST00000218426.2
CDS CAA 90 bp	TTTCCTGCTGCAGGGCTTCAGCCTTGCATTTCCACGACTGTTCATTaGCACCCATTTCCTGGATCCTCTCTTTCACCGCTTCCTCTGTGG	+
Preference number: 6 (lower is better) Translates to: FPAAGLQPCISTTVH*HPFPGSSLSPLPLW Trigger: CCACAGAGGAAGCGGTGAAAGAGAGGATCCAGGAAATGGGTGCAAATGAACAGTCGTGGAAATGCAAGGCTGAAGCCCTGCAGCAGGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021453.6 ENSMUST00000218426.2
CDS CAA 90 bp	AACATGCTGGCAAGGTCAGGATGGACTGGGTCGGCTGCCTTTTTGTaGTGTATGATTGGGTTCCCGGTAGGATCCATTTCAAGAGGTGGA	+
Preference number: 6 (lower is better) Translates to: NMLARSGWTGSAAFL*CMIGFPVGSISRGG Trigger: TCCACCTCTTGAAATGGATCCTACCGGGAACCCAATCATACACAACAAAAAGGCAGCCGACCCAGTCCATCCTGACCTTGCCAGCATGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021453.6 ENSMUST00000218426.2 ENSMUST00000219327.2
CDS GCA 72 bp	TCAGCTCAGCTAAAAGAGTCTTGTTTTTCACCAACATaGTGGCAAGGTCAGGATGGACTGGGTCGGCTGCCT	+
Preference number: 6 (lower is better) Translates to: SAQLKESCFSPT*WQGQDGLGRLP Trigger: AGGCAGCCGACCCAGTCCATCCTGACCTTGCCAGCATGTTGGTGAAAAACAAGACTCTTTTAGCTGAGCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021453.6 ENSMUST00000218426.2 ENSMUST00000219327.2
CDS GCA 72 bp	CAGGGCTTCAGCCTTGCATTTCCACGACTGTTCATTTaGACCCATTTCCTGGATCCTCTCTTTCACCGCTTC	+
Preference number: 6 (lower is better) Translates to: QGFSLAFPRLFI*THFLDPLFHRF Trigger: GAAGCGGTGAAAGAGAGGATCCAGGAAATGGGTGCAAATGAACAGTCGTGGAAATGCAAGGCTGAAGCCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021453.6 ENSMUST00000218426.2
CDS CAA 72 bp	GCAAGGTCAGGATGGACTGGGTCGGCTGCCTTTTTGTaGTGTATGATTGGGTTCCCGGTAGGATCCATTTCA	+
Preference number: 6 (lower is better) Translates to: ARSGWTGSAAFL*CMIGFPVGSIS Trigger: TGAAATGGATCCTACCGGGAACCCAATCATACACAACAAAAAGGCAGCCGACCCAGTCCATCCTGACCTTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021453.6 ENSMUST00000218426.2 ENSMUST00000219327.2
CDS CAA 72 bp	GCAGGGCTTCAGCCTTGCATTTCCACGACTGTTCATTaGCACCCATTTCCTGGATCCTCTCTTTCACCGCTT	+
Preference number: 6 (lower is better) Translates to: AGLQPCISTTVH*HPFPGSSLSPL Trigger: AAGCGGTGAAAGAGAGGATCCAGGAAATGGGTGCAAATGAACAGTCGTGGAAATGCAAGGCTGAAGCCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021453.6 ENSMUST00000218426.2
CDS CCA 72 bp	GTTTTTCACCAACATGCTGGCAAGGTCAGGATGGACTaGGTCGGCTGCCTTTTTGTTGTGTATGATTGGGTT	+
Preference number: 6 (lower is better) Translates to: VFHQHAGKVRMD*VGCLFVVYDWV Trigger: AACCCAATCATACACAACAAAAAGGCAGCCGACCCAGTCCATCCTGACCTTGCCAGCATGTTGGTGAAAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000021453.6 ENSMUST00000218426.2 ENSMUST00000219327.2
CDS CCA 72 bp	GTCTTGTTTTTCACCAACATGCTGGCAAGGTCAGGATaGACTGGGTCGGCTGCCTTTTTGTTGTGTATGATT	+
Preference number: 6 (lower is better) Translates to: VLFFTNMLARSG*TGSAAFLLCMI Trigger: AATCATACACAACAAAAAGGCAGCCGACCCAGTCCATCCTGACCTTGCCAGCATGTTGGTGAAAAACAAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000021453.6 ENSMUST00000218426.2 ENSMUST00000219327.2
CDS CAA 90 bp	GCCATCTTGGAATTCTGCTCAATATCCAATAACATCTCTAACTTTTaGAACTTGCTGTGTTTATCTATGTGGGCAGTCCGGGTCCTGGAG	+
Preference number: 6 (lower is better) Translates to: AILEFCSISNNISNF*NLLCLSMWAVRVLE Trigger: CTCCAGGACCCGGACTGCCCACATAGATAAACACAGCAAGTTCAAAAAGTTAGAGATGTTATTGGATATTGAGCAGAATTCCAAGATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021453.6 ENSMUST00000218426.2
CDS CCA 72 bp	TTGCTGACATTTATCACCAGTAGTTTGCCCATCAATTaGTCCCTCAGAGTAAACAACACTGCCTCTCTTCAA	+
Preference number: 6 (lower is better) Translates to: LLTFITSSLPIN*SLRVNNTASLQ Trigger: TTGAAGAGAGGCAGTGTTGTTTACTCTGAGGGACCAATTGATGGGCAAACTACTGGTGATAAATGTCAGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021453.6 ENSMUST00000218426.2
CDS CCA 72 bp	ATCTCTAACTTTTTGAACTTGCTGTGTTTATCTATGTaGGCAGTCCGGGTCCTGGAGTTTTCTTTCTTCCTG	+
Preference number: 6 (lower is better) Translates to: ISNFLNLLCLSM*AVRVLEFSFFL Trigger: CAGGAAGAAAGAAAACTCCAGGACCCGGACTGCCCACATAGATAAACACAGCAAGTTCAAAAAGTTAGAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021453.6 ENSMUST00000218426.2
CDS CAA 90 bp	CTTTTCTTGGTGGATCAAATCTTGCTGACATTTATCACCAGTAGTTaGCCCATCAATTGGTCCCTCAGAGTAAACAACACTGCCTCTCTT	+
Preference number: 6 (lower is better) Translates to: LFLVDQILLTFITSS*PINWSLRVNNTASL Trigger: AAGAGAGGCAGTGTTGTTTACTCTGAGGGACCAATTGATGGGCAAACTACTGGTGATAAATGTCAGCAAGATTTGATCCACCAAGAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021453.6 ENSMUST00000218426.2
CDS GCA 72 bp	GACGACAAGCTTCAGCCGATTAATGACATCCTTGTCTaGTGTTTTCATGTTAAATCCCAGCATCTTCATGAT	+
Preference number: 6 (lower is better) Translates to: DDKLQPINDILV*CFHVKSQHLHD Trigger: ATCATGAAGATGCTGGGATTTAACATGAAAACAGCAGACAAGGATGTCATTAATCGGCTGAAGCTTGTCGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021453.6
CDS CAA 72 bp	GTGGATCAAATCTTGCTGACATTTATCACCAGTAGTTaGCCCATCAATTGGTCCCTCAGAGTAAACAACACT	+
Preference number: 6 (lower is better) Translates to: VDQILLTFITSS*PINWSLRVNNT Trigger: AGTGTTGTTTACTCTGAGGGACCAATTGATGGGCAAACTACTGGTGATAAATGTCAGCAAGATTTGATCCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021453.6 ENSMUST00000218426.2
CDS CAA 72 bp	TGCTCAATATCCAATAACATCTCTAACTTTTTGAACTaGCTGTGTTTATCTATGTGGGCAGTCCGGGTCCTG	+
Preference number: 6 (lower is better) Translates to: CSISNNISNFLN*LCLSMWAVRVL Trigger: CAGGACCCGGACTGCCCACATAGATAAACACAGCAAGTTCAAAAAGTTAGAGATGTTATTGGATATTGAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021453.6 ENSMUST00000218426.2
CDS CAA 72 bp	ATTTGGACGACAAGCTTCAGCCGATTAATGACATCCTaGTCTGCTGTTTTCATGTTAAATCCCAGCATCTTC	+
Preference number: 6 (lower is better) Translates to: IWTTSFSRLMTS*SAVFMLNPSIF Trigger: GAAGATGCTGGGATTTAACATGAAAACAGCAGACAAGGATGTCATTAATCGGCTGAAGCTTGTCGTCCAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021453.6
CDS CAA 90 bp	TTGGAATTCTGCTCAATATCCAATAACATCTCTAACTTTTTGAACTaGCTGTGTTTATCTATGTGGGCAGTCCGGGTCCTGGAGTTTTCT	+
Preference number: 6 (lower is better) Translates to: LEFCSISNNISNFLN*LCLSMWAVRVLEFS Trigger: AGAAAACTCCAGGACCCGGACTGCCCACATAGATAAACACAGCAAGTTCAAAAAGTTAGAGATGTTATTGGATATTGAGCAGAATTCCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021453.6 ENSMUST00000218426.2
CDS TCA 72 bp	TCAGACGTTAGCTTTTCTTGGTGGATCAAATCTTGCTaGCATTTATCACCAGTAGTTTGCCCATCAATTGGT	+
Preference number: 6 (lower is better) Translates to: SDVSFSWWIKSC*HLSPVVCPSIG Trigger: ACCAATTGATGGGCAAACTACTGGTGATAAATGTCAGCAAGATTTGATCCACCAAGAAAAGCTAACGTCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021453.6 ENSMUST00000218426.2
CDS GCA 72 bp	TCACCTCTTGCAAAGACGTTTCTTTCACATAGAGCTTaGTTTGAAGATTTCTCAGCTCAGCTAAAAGAGTCT	+
Preference number: 6 (lower is better) Translates to: SPLAKTFLSHRA*FEDFSAQLKES Trigger: AGACTCTTTTAGCTGAGCTGAGAAATCTTCAAAGCAAGCTCTATGTGAAAGAAACGTCTTTGCAAGAGGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021453.6 ENSMUST00000218426.2 ENSMUST00000219327.2
CDS TCA 72 bp	AATTCTGCTCAATATCCAATAACATCTCTAACTTTTTaGACTTGCTGTGTTTATCTATGTGGGCAGTCCGGG	+
Preference number: 6 (lower is better) Translates to: NSAQYPITSLTF*TCCVYLCGQSG Trigger: CCCGGACTGCCCACATAGATAAACACAGCAAGTTCAAAAAGTTAGAGATGTTATTGGATATTGAGCAGAATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021453.6 ENSMUST00000218426.2
CDS CAA 72 bp	GAATTCTGCTCAATATCCAATAACATCTCTAACTTTTaGAACTTGCTGTGTTTATCTATGTGGGCAGTCCGG	+
Preference number: 6 (lower is better) Translates to: EFCSISNNISNF*NLLCLSMWAVR Trigger: CCGGACTGCCCACATAGATAAACACAGCAAGTTCAAAAAGTTAGAGATGTTATTGGATATTGAGCAGAATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021453.6 ENSMUST00000218426.2
CDS TCA 72 bp	AAAATCTTCATCTTCATTAGAGAATCAATAAGGTCCTaGAGGCTCTTGATGTCATCTCTCAGGGATATTATC	+
Preference number: 6 (lower is better) Translates to: KIFIFIRESIRS*RLLMSSLRDII Trigger: GATAATATCCCTGAGAGATGACATCAAGAGCCTTCAGGACCTTATTGATTCTCTAATGAAGATGAAGATTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021453.6 ENSMUST00000218426.2 ENSMUST00000219327.2

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