Pregenerated sensors for TEX19.1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039329Ensembl transcript IDs: ENSMUST00000039088.9
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGGTTCATAAGCTCACAGGATGTTCAAGATGCCCCCTCAAGTCCTaGACCAACTGTTCCCCTGAGCTGCTCAGAACAGGCAACCTCTTG | + |
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Preference number: 1 (lower is better) Translates to: EVHKLTGCSRCPLKS*TNCSPELLRTGNLL Trigger: CAAGAGGTTGCCTGTTCTGAGCAGCTCAGGGGAACAGTTGGTCCAGGACTTGAGGGGGCATCTTGAACATCCTGTGAGCTTATGAACCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| 3UTR TCA 90 bp | ACAGCTAAACATACAGCTAGGCCTCACCTACCAAACACTGAACACTaGCACGAACATGCCAGACTTCCCTCTGAGGTTCATAAGCTCACA | + |
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Preference number: 1 (lower is better) Translates to: TAKHTARPHLPNTEH*HEHARLPSEVHKLT Trigger: TGTGAGCTTATGAACCTCAGAGGGAAGTCTGGCATGTTCGTGTCAGTGTTCAGTGTTTGGTAGGTGAGGCCTAGCTGTATGTTTAGCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| 3UTR-3UTR CCA 90 bp | GGCCTCACCTACCAAACACTGAACACTGACACGAACATGCCAGACTTCCCTCTGTGCCCCCTCAAGTCCTaGACCAACTGTTCCCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: GLTYQTLNTDTNMPDFPLCPLKS*TNCSPE Trigger: CTCAGGGGAACAGTTGGTCCAGGACTTGAGGGGGCA...CAGAGGGAAGTCTGGCATGTTCGTGTCAGTGTTCAGTGTTTGGTAGGTGAGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| 3UTR-3UTR TCA 90 bp | AAGCTCACAGGATGTTCAAGATGCCCCCTCAAGTCCTGGACCAACTGTTCCCCTGCCCTGGGGAATGTCTaGGCTTTAGTGTCTCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: KLTGCSRCPLKSWTNCSPALGNV*ALVSQE Trigger: TTCCTGAGACACTAAAGCTCAGACATTCCCCAGGGC...AGGGGAACAGTTGGTCCAGGACTTGAGGGGGCATCTTGAACATCCTGTGAGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| 3UTR-3UTR GCA 90 bp | AACATACAGCTAGGCCTCACCTACCAAACACTGAACACTGACACGAACATGCCAGAACAGGCAACCTCTTaGTCTTCACAGTCCCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: NIQLGLTYQTLNTDTNMPEQATS*SSQSPG Trigger: CCCTGGGGACTGTGAAGAGCAAGAGGTTGCCTGTTC...TGGCATGTTCGTGTCAGTGTTCAGTGTTTGGTAGGTGAGGCCTAGCTGTATGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| 3UTR GCA 72 bp | GCCCCCTCAAGTCCTGGACCAACTGTTCCCCTGAGCTaGTCAGAACAGGCAACCTCTTGCTCTTCACAGTCC | + |
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Preference number: 3 (lower is better) Translates to: APSSPGPTVPLS*SEQATSCSSQS Trigger: GGACTGTGAAGAGCAAGAGGTTGCCTGTTCTGAGCAGCTCAGGGGAACAGTTGGTCCAGGACTTGAGGGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| 3UTR CCA 72 bp | AAGCTCACAGGATGTTCAAGATGCCCCCTCAAGTCCTaGACCAACTGTTCCCCTGAGCTGCTCAGAACAGGC | + |
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Preference number: 3 (lower is better) Translates to: KLTGCSRCPLKS*TNCSPELLRTG Trigger: GCCTGTTCTGAGCAGCTCAGGGGAACAGTTGGTCCAGGACTTGAGGGGGCATCTTGAACATCCTGTGAGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| 3UTR-3UTR CAA 90 bp | GGCCTCACCTACCAAACACTGAACACTGACACGAACATGCCAGACTTCCCTCTGAGAACAGGCAACCTCTaGCTCTTCACAGTCCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: GLTYQTLNTDTNMPDFPLRTGNL*LFTVPR Trigger: CCTGGGGACTGTGAAGAGCAAGAGGTTGCCTGTTCT...CAGAGGGAAGTCTGGCATGTTCGTGTCAGTGTTCAGTGTTTGGTAGGTGAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| 3UTR TCA 72 bp | CATACAGCTAGGCCTCACCTACCAAACACTGAACACTaGCACGAACATGCCAGACTTCCCTCTGAGGTTCAT | + |
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Preference number: 3 (lower is better) Translates to: HTARPHLPNTEH*HEHARLPSEVH Trigger: ATGAACCTCAGAGGGAAGTCTGGCATGTTCGTGTCAGTGTTCAGTGTTTGGTAGGTGAGGCCTAGCTGTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS-3UTR GCA 90 bp | CACAGTCCCCAGGGCCCTGGGGAATGTCTGAGCTTTAGTGTCTCAGGAATGTGCGGAGGGATGAGCTGGTaGGAGCAGGGAAAAAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: HSPQGPGECLSFSVSGMCGGMSW*EQGKSP Trigger: TGGGCTTTTTCCCTGCTCGCACCAGCTCATCCCTCC...GCACATTCCTGAGACACTAAAGCTCAGACATTCCCCAGGGCCCTGGGGACTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS-3UTR CCA 90 bp | AAGCTCACAGGATGTTCAAGATGCCCCCTCAAGTCCTGGACCAACTGTTCCCCTTGTCCACACAGGGGTTaGCAGCAGGACCCCAGACCC | + |
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Preference number: 4 (lower is better) Translates to: KLTGCSRCPLKSWTNCSPCPHRG*QQDPRP Trigger: GGGTCTGGGGTCCTGCTGCCAACCCCTGTGTGGACA...AGGGGAACAGTTGGTCCAGGACTTGAGGGGGCATCTTGAACATCCTGTGAGCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS-3UTR TCA 90 bp | CCCTCTGAGGTTCATAAGCTCACAGGATGTTCAAGATGCCCCCTCAAGTCCTGGCCAGCGGACACGCATTaGCAGCAGGTGGCACCTAGA | + |
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Preference number: 4 (lower is better) Translates to: PSEVHKLTGCSRCPLKSWPADTH*QQVAPR Trigger: TCTAGGTGCCACCTGCTGTCAATGCGTGTCCGCTGG...CCAGGACTTGAGGGGGCATCTTGAACATCCTGTGAGCTTATGAACCTCAGAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS-3UTR CCA 90 bp | TCTGAGGTTCATAAGCTCACAGGATGTTCAAGATGCCCCCTCAAGTCCTGGACCCTCCAGGGAAGGGCCTaGGTCCACTCAGCATCCTCA | + |
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Preference number: 4 (lower is better) Translates to: SEVHKLTGCSRCPLKSWTLQGRA*VHSASS Trigger: TGAGGATGCTGAGTGGACCCAGGCCCTTCCCTGGAG...GGTCCAGGACTTGAGGGGGCATCTTGAACATCCTGTGAGCTTATGAACCTCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS-3UTR GCA 90 bp | AACATACAGCTAGGCCTCACCTACCAAACACTGAACACTGACACGAACATGCCACATAGAGGCAGGACATaGCCCTGGCCCCATGGCGAA | + |
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Preference number: 4 (lower is better) Translates to: NIQLGLTYQTLNTDTNMPHRGRT*PWPHGE Trigger: TTCGCCATGGGGCCAGGGGCATGTCCTGCCTCTATG...TGGCATGTTCGTGTCAGTGTTCAGTGTTTGGTAGGTGAGGCCTAGCTGTATGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS-3UTR GCA 90 bp | CTTCCCTCTGAGGTTCATAAGCTCACAGGATGTTCAAGATGCCCCCTCAAGTCCTCCTCTTCCTCCTCTTaGCAGTCTCCCATCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LPSEVHKLTGCSRCPLKSSSSSS*QSPISR Trigger: CCTGGAGATGGGAGACTGGCAAGAGGAGGAAGAGGA...GGACTTGAGGGGGCATCTTGAACATCCTGTGAGCTTATGAACCTCAGAGGGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS-3UTR GCA 90 bp | AAGCTCACAGGATGTTCAAGATGCCCCCTCAAGTCCTGGACCAACTGTTCCCCTCTGAAGCTGTCAGGATaGTCAGCCTCCAGGGATTCA | + |
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Preference number: 4 (lower is better) Translates to: KLTGCSRCPLKSWTNCSPLKLSG*SASRDS Trigger: TGAATCCCTGGAGGCTGAGCATCCTGACAGCTTCAG...AGGGGAACAGTTGGTCCAGGACTTGAGGGGGCATCTTGAACATCCTGTGAGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS-3UTR GCA 90 bp | CACAGTCCCCAGGGCCCTGGGGAATGTCTGAGCTTTAGTGTCTCAGGAATGTGCTCTGGCATGTTAATGTaGCAGGGCAAGAAGGAACCT | + |
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Preference number: 4 (lower is better) Translates to: HSPQGPGECLSFSVSGMCSGMLM*QGKKEP Trigger: AGGTTCCTTCTTGCCCTGGCACATTAACATGCCAGA...GCACATTCCTGAGACACTAAAGCTCAGACATTCCCCAGGGCCCTGGGGACTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS-3UTR CCA 90 bp | CCTCTTGCTCTTCACAGTCCCCAGGGCCCTGGGGAATGTCTGAGCTTTAGTGTCTTCAGAGACACTCTGTaGCACATAAAGGGACCCCAA | + |
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Preference number: 4 (lower is better) Translates to: PLALHSPQGPGECLSFSVFRDTL*HIKGPQ Trigger: TTGGGGTCCCTTTATGTGCCACAGAGTGTCTCTGAA...GACACTAAAGCTCAGACATTCCCCAGGGCCCTGGGGACTGTGAAGAGCAAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS-3UTR GCA 90 bp | GGCCTCACCTACCAAACACTGAACACTGACACGAACATGCCAGACTTCCCTCTGTCCAACAACACAGGTTaGCCAGGAGATGGCATCACA | + |
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Preference number: 4 (lower is better) Translates to: GLTYQTLNTDTNMPDFPLSNNTG*PGDGIT Trigger: TGTGATGCCATCTCCTGGGCAACCTGTGTTGTTGGA...CAGAGGGAAGTCTGGCATGTTCGTGTCAGTGTTCAGTGTTTGGTAGGTGAGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS-3UTR CCA 90 bp | CCTCTTGCTCTTCACAGTCCCCAGGGCCCTGGGGAATGTCTGAGCTTTAGTGTCCAGTGGGCACAAAAATaGAGAATAGTATGCCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: PLALHSPQGPGECLSFSVQWAQK*RIVCPV Trigger: CACAGGGCATACTATTCTCCATTTTTGTGCCCACTG...GACACTAAAGCTCAGACATTCCCCAGGGCCCTGGGGACTGTGAAGAGCAAGAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS-3UTR CCA 90 bp | TCTGAGGTTCATAAGCTCACAGGATGTTCAAGATGCCCCCTCAAGTCCTGGACCTCCACAGGTAGCAGGTaGCAGGCAATAACTCCATCC | + |
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Preference number: 4 (lower is better) Translates to: SEVHKLTGCSRCPLKSWTSTGSR*QAITPS Trigger: GGATGGAGTTATTGCCTGCCACCTGCTACCTGTGGA...GGTCCAGGACTTGAGGGGGCATCTTGAACATCCTGTGAGCTTATGAACCTCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS-3UTR GCA 90 bp | TCTGAGGTTCATAAGCTCACAGGATGTTCAAGATGCCCCCTCAAGTCCTGGACCTTGCAACCAGGATTGTaGTACTGTCTGGTCCAAGGG | + |
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Preference number: 4 (lower is better) Translates to: SEVHKLTGCSRCPLKSWTLQPGL*YCLVQG Trigger: CCCTTGGACCAGACAGTAGCACAATCCTGGTTGCAA...GGTCCAGGACTTGAGGGGGCATCTTGAACATCCTGTGAGCTTATGAACCTCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS-3UTR CCA 90 bp | CCTCTTGCTCTTCACAGTCCCCAGGGCCCTGGGGAATGTCTGAGCTTTAGTGTCAGGTTGCCCAGGAGATaGCATCACATCAAAAATATC | + |
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Preference number: 4 (lower is better) Translates to: PLALHSPQGPGECLSFSVRLPRR*HHIKNI Trigger: GATATTTTTGATGTGATGCCATCTCCTGGGCAACCT...GACACTAAAGCTCAGACATTCCCCAGGGCCCTGGGGACTGTGAAGAGCAAGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS-3UTR GCA 90 bp | TCTGAGGTTCATAAGCTCACAGGATGTTCAAGATGCCCCCTCAAGTCCTGGACCAAGATGGTACAGCCATaGCTCATAGAGGCAGGACAT | + |
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Preference number: 4 (lower is better) Translates to: SEVHKLTGCSRCPLKSWTKMVQP*LIEAGH Trigger: ATGTCCTGCCTCTATGAGGCATGGCTGTACCATCTT...GGTCCAGGACTTGAGGGGGCATCTTGAACATCCTGTGAGCTTATGAACCTCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS-3UTR GCA 90 bp | CCCTCTGAGGTTCATAAGCTCACAGGATGTTCAAGATGCCCCCTCAAGTCCTGGACAAACTTCTGGTCTTaGAACCAGGATTGTGCTACT | + |
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Preference number: 4 (lower is better) Translates to: PSEVHKLTGCSRCPLKSWTNFWS*NQDCAT Trigger: AGTAGCACAATCCTGGTTGCAAGACCAGAAGTTTGT...CCAGGACTTGAGGGGGCATCTTGAACATCCTGTGAGCTTATGAACCTCAGAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS-3UTR CCA 90 bp | CTTCCCTCTGAGGTTCATAAGCTCACAGGATGTTCAAGATGCCCCCTCAAGTCCAGGAGGACAAACTTCTaGTCTTGCAACCAGGATTGT | + |
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Preference number: 4 (lower is better) Translates to: LPSEVHKLTGCSRCPLKSRRTNF*SCNQDC Trigger: ACAATCCTGGTTGCAAGACCAGAAGTTTGTCCTCCT...GGACTTGAGGGGGCATCTTGAACATCCTGTGAGCTTATGAACCTCAGAGGGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS-3UTR CCA 90 bp | AACATACAGCTAGGCCTCACCTACCAAACACTGAACACTGACACGAACATGCCATTCGTCTGTTCCCCATaGACAAGATGGTACAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: NIQLGLTYQTLNTDTNMPFVCSP*TRWYSH Trigger: ATGGCTGTACCATCTTGTCCATGGGGAACAGACGAA...TGGCATGTTCGTGTCAGTGTTCAGTGTTTGGTAGGTGAGGCCTAGCTGTATGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS-3UTR CCA 90 bp | TCTGAGGTTCATAAGCTCACAGGATGTTCAAGATGCCCCCTCAAGTCCTGGACCGAGGAAAGAGCTCAGTaGGCACAAAAATGGAGAATA | + |
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Preference number: 4 (lower is better) Translates to: SEVHKLTGCSRCPLKSWTEERAQ*AQKWRI Trigger: TATTCTCCATTTTTGTGCCCACTGAGCTCTTTCCTC...GGTCCAGGACTTGAGGGGGCATCTTGAACATCCTGTGAGCTTATGAACCTCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS TCA 90 bp | ACCCACATCTCACCAGGGTCCAGCAACACCTGCCAGTGCTGGACCTaGGTCCTTACGACCCAGCGGACACGCATTGACAGCAGGTGGCAC | + |
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Preference number: 5 (lower is better) Translates to: THISPGSSNTCQCWT*VLTTQRTRIDSRWH Trigger: GTGCCACCTGCTGTCAATGCGTGTCCGCTGGGTCGTAAGGACTCAGGTCCAGCACTGGCAGGTGTTGCTGGACCCTGGTGAGATGTGGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS-3UTR CAA 90 bp | AACATACAGCTAGGCCTCACCTACCAAACACTGAACACTGACACGAACATGCCAGTGTCCACACAGGGGTaGGCAGCAGGACCCCAGACC | + |
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Preference number: 5 (lower is better) Translates to: NIQLGLTYQTLNTDTNMPVSTQG*AAGPQT Trigger: GGTCTGGGGTCCTGCTGCCAACCCCTGTGTGGACAC...TGGCATGTTCGTGTCAGTGTTCAGTGTTTGGTAGGTGAGGCCTAGCTGTATGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS GCA 90 bp | AGGTGGCAGGCAATAACTCCATCCCTAATTCTGAAGCTGTCAGGATaGTCAGCCTCCAGGGATTCAGGCTCTGATGGTACAGGCCGTGCT | + |
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Preference number: 5 (lower is better) Translates to: RWQAITPSLILKLSG*SASRDSGSDGTGRA Trigger: AGCACGGCCTGTACCATCAGAGCCTGAATCCCTGGAGGCTGAGCATCCTGACAGCTTCAGAATTAGGGATGGAGTTATTGCCTGCCACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS CCA 90 bp | GGCATCACATCAAAAATATCCCACCAAGTCAGAGGAGGGATGAGCTaGTGCGAGCAGGGAAAAAGCCCATCAAGTCTCCAGGGAAGGGCC | + |
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Preference number: 5 (lower is better) Translates to: GITSKISHQVRGGMS*CEQGKSPSSLQGRA Trigger: GGCCCTTCCCTGGAGACTTGATGGGCTTTTTCCCTGCTCGCACCAGCTCATCCCTCCTCTGACTTGGTGGGATATTTTTGATGTGATGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS TCA 90 bp | GTCCACTCAGCATCCTCAGGACCCAGATCCAGGGGTACAGCTTCCTaGGGAAAGAGCTCAGTGGGCACAAAAATGGAGAATAGTATGCCC | + |
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Preference number: 5 (lower is better) Translates to: VHSASSGPRSRGTAS*GKSSVGTKMENSMP Trigger: GGGCATACTATTCTCCATTTTTGTGCCCACTGAGCTCTTTCCTCAGGAAGCTGTACCCCTGGATCTGGGTCCTGAGGATGCTGAGTGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS GCA 90 bp | ATCACATCAAAAATATCCCACCAAGTCAGAGGAGGGATGAGCTGGTaGGAGCAGGGAAAAAGCCCATCAAGTCTCCAGGGAAGGGCCTGG | + |
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Preference number: 5 (lower is better) Translates to: ITSKISHQVRGGMSW*EQGKSPSSLQGRAW Trigger: CCAGGCCCTTCCCTGGAGACTTGATGGGCTTTTTCCCTGCTCGCACCAGCTCATCCCTCCTCTGACTTGGTGGGATATTTTTGATGTGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS CCA 90 bp | AGGTGGCACCTAGATTGGACGCTATCCAACAGGAGGACAAACTTCTaGTCTTGCAACCAGGATTGTGCTACTGTCTGGTCCAAGGGCCAG | + |
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Preference number: 5 (lower is better) Translates to: RWHLDWTLSNRRTNF*SCNQDCATVWSKGQ Trigger: CTGGCCCTTGGACCAGACAGTAGCACAATCCTGGTTGCAAGACCAGAAGTTTGTCCTCCTGTTGGATAGCGTCCAATCTAGGTGCCACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS-3UTR CAA 90 bp | AAGCTCACAGGATGTTCAAGATGCCCCCTCAAGTCCTGGACCAACTGTTCCCCTGTCTTGCAACCAGGATaGTGCTACTGTCTGGTCCAA | + |
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Preference number: 5 (lower is better) Translates to: KLTGCSRCPLKSWTNCSPVLQPG*CYCLVQ Trigger: TTGGACCAGACAGTAGCACAATCCTGGTTGCAAGAC...AGGGGAACAGTTGGTCCAGGACTTGAGGGGGCATCTTGAACATCCTGTGAGCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS TCA 90 bp | GAGATGGCATCACATCAAAAATATCCCACCAAGTCAGAGGAGGGATaGGCTGGTGCGAGCAGGGAAAAAGCCCATCAAGTCTCCAGGGAA | + |
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Preference number: 5 (lower is better) Translates to: EMASHQKYPTKSEEG*AGASREKAHQVSRE Trigger: TTCCCTGGAGACTTGATGGGCTTTTTCCCTGCTCGCACCAGCTCATCCCTCCTCTGACTTGGTGGGATATTTTTGATGTGATGCCATCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS GCA 90 bp | GTCTGGTCCAAGGGCCAGTGGCATCTCAACTCCAACAACACAGGTTaGCCAGGAGATGGCATCACATCAAAAATATCCCACCAAGTCAGA | + |
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Preference number: 5 (lower is better) Translates to: VWSKGQWHLNSNNTG*PGDGITSKISHQVR Trigger: TCTGACTTGGTGGGATATTTTTGATGTGATGCCATCTCCTGGGCAACCTGTGTTGTTGGAGTTGAGATGCCACTGGCCCTTGGACCAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS GCA 90 bp | GCTATCCAACAGGAGGACAAACTTCTGGTCTTGCAACCAGGATTGTaGTACTGTCTGGTCCAAGGGCCAGTGGCATCTCAACTCCAACAA | + |
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Preference number: 5 (lower is better) Translates to: AIQQEDKLLVLQPGL*YCLVQGPVASQLQQ Trigger: TTGTTGGAGTTGAGATGCCACTGGCCCTTGGACCAGACAGTAGCACAATCCTGGTTGCAAGACCAGAAGTTTGTCCTCCTGTTGGATAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS CCA 90 bp | GTCAGTACCACAAATAGTAGCATCTGTGATAAACAGCCTCTCTCCTaGCTCCCAGCTCCAGGTCTCTGGCATGTTAATGTGCCAGGGCAA | + |
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Preference number: 5 (lower is better) Translates to: VSTTNSSICDKQPLS*LPAPGLWHVNVPGQ Trigger: TTGCCCTGGCACATTAACATGCCAGAGACCTGGAGCTGGGAGCCAGGAGAGAGGCTGTTTATCACAGATGCTACTATTTGTGGTACTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS-3UTR CAA 90 bp | AACATACAGCTAGGCCTCACCTACCAAACACTGAACACTGACACGAACATGCCACTCCAACAACACAGGTaGCCCAGGAGATGGCATCAC | + |
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Preference number: 5 (lower is better) Translates to: NIQLGLTYQTLNTDTNMPLQQHR*PRRWHH Trigger: GTGATGCCATCTCCTGGGCAACCTGTGTTGTTGGAG...TGGCATGTTCGTGTCAGTGTTCAGTGTTTGGTAGGTGAGGCCTAGCTGTATGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS CCA 90 bp | GCAAGAAGGAACCTACCCAGAAGCCTTTATTCCACAGGTAGCAGGTaGCAGGCAATAACTCCATCCCTAATTCTGAAGCTGTCAGGATGC | + |
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Preference number: 5 (lower is better) Translates to: ARRNLPRSLYSTGSR*QAITPSLILKLSGC Trigger: GCATCCTGACAGCTTCAGAATTAGGGATGGAGTTATTGCCTGCCACCTGCTACCTGTGGAATAAAGGCTTCTGGGTAGGTTCCTTCTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS-3UTR CAA 90 bp | CCCTCTGAGGTTCATAAGCTCACAGGATGTTCAAGATGCCCCCTCAAGTCCTGGAATAGGAAAGCTGCCTaGAAGCAAGCAAAGCAGATC | + |
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Preference number: 5 (lower is better) Translates to: PSEVHKLTGCSRCPLKSWNRKAA*KQAKQI Trigger: GATCTGCTTTGCTTGCTTCAAGGCAGCTTTCCTATT...CCAGGACTTGAGGGGGCATCTTGAACATCCTGTGAGCTTATGAACCTCAGAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS CCA 72 bp | TGGTACAGGCCGTGCTGCCCAACTTCTTTCCGAAAATaGGCCACCCACATCTCACCAGGGTCCAGCAACACC | + |
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Preference number: 6 (lower is better) Translates to: WYRPCCPTSFRK*ATHISPGSSNT Trigger: GGTGTTGCTGGACCCTGGTGAGATGTGGGTGGCCCATTTTCGGAAAGAAGTTGGGCAGCACGGCCTGTACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS GCA 72 bp | CCTGGCTCCCAGCTCCAGGTCTCTGGCATGTTAATGTaGCAGGGCAAGAAGGAACCTACCCAGAAGCCTTTA | + |
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Preference number: 6 (lower is better) Translates to: PGSQLQVSGMLM*QGKKEPTQKPL Trigger: TAAAGGCTTCTGGGTAGGTTCCTTCTTGCCCTGGCACATTAACATGCCAGAGACCTGGAGCTGGGAGCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS GCA 72 bp | GAAAGAGCTCAGTGGGCACAAAAATGGAGAATAGTATaGCCTGTGTCCACACAGGGGTTGGCAGCAGGACCC | + |
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Preference number: 6 (lower is better) Translates to: ERAQWAQKWRIV*PVSTQGLAAGP Trigger: GGGTCCTGCTGCCAACCCCTGTGTGGACACAGGGCATACTATTCTCCATTTTTGTGCCCACTGAGCTCTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS GCA 72 bp | AAAATATCCCACCAAGTCAGAGGAGGGATGAGCTGGTaGGAGCAGGGAAAAAGCCCATCAAGTCTCCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: KISHQVRGGMSW*EQGKSPSSLQG Trigger: TCCCTGGAGACTTGATGGGCTTTTTCCCTGCTCGCACCAGCTCATCCCTCCTCTGACTTGGTGGGATATTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS GCA 72 bp | TGGACGCTATCCAACAGGAGGACAAACTTCTGGTCTTaGAACCAGGATTGTGCTACTGTCTGGTCCAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: WTLSNRRTNFWS*NQDCATVWSKG Trigger: GCCCTTGGACCAGACAGTAGCACAATCCTGGTTGCAAGACCAGAAGTTTGTCCTCCTGTTGGATAGCGTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS CAA 72 bp | CAACAGGAGGACAAACTTCTGGTCTTGCAACCAGGATaGTGCTACTGTCTGGTCCAAGGGCCAGTGGCATCT | + |
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Preference number: 6 (lower is better) Translates to: QQEDKLLVLQPG*CYCLVQGPVAS Trigger: AGATGCCACTGGCCCTTGGACCAGACAGTAGCACAATCCTGGTTGCAAGACCAGAAGTTTGTCCTCCTGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS CCA 72 bp | GATCCAGGGGTACAGCTTCCTGAGGAAAGAGCTCAGTaGGCACAAAAATGGAGAATAGTATGCCCTGTGTCC | + |
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Preference number: 6 (lower is better) Translates to: DPGVQLPEERAQ*AQKWRIVCPVS Trigger: GGACACAGGGCATACTATTCTCCATTTTTGTGCCCACTGAGCTCTTTCCTCAGGAAGCTGTACCCCTGGATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS CCA 72 bp | AACTTCTGGTCTTGCAACCAGGATTGTGCTACTGTCTaGTCCAAGGGCCAGTGGCATCTCAACTCCAACAAC | + |
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Preference number: 6 (lower is better) Translates to: NFWSCNQDCATV*SKGQWHLNSNN Trigger: GTTGTTGGAGTTGAGATGCCACTGGCCCTTGGACCAGACAGTAGCACAATCCTGGTTGCAAGACCAGAAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS CAA 72 bp | TTGGACGCTATCCAACAGGAGGACAAACTTCTGGTCTaGCAACCAGGATTGTGCTACTGTCTGGTCCAAGGG | + |
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Preference number: 6 (lower is better) Translates to: LDAIQQEDKLLV*QPGLCYCLVQG Trigger: CCCTTGGACCAGACAGTAGCACAATCCTGGTTGCAAGACCAGAAGTTTGTCCTCCTGTTGGATAGCGTCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS GCA 72 bp | GCAATAACTCCATCCCTAATTCTGAAGCTGTCAGGATaGTCAGCCTCCAGGGATTCAGGCTCTGATGGTACA | + |
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Preference number: 6 (lower is better) Translates to: AITPSLILKLSG*SASRDSGSDGT Trigger: TGTACCATCAGAGCCTGAATCCCTGGAGGCTGAGCATCCTGACAGCTTCAGAATTAGGGATGGAGTTATTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS CCA 72 bp | CTAGATTGGACGCTATCCAACAGGAGGACAAACTTCTaGTCTTGCAACCAGGATTGTGCTACTGTCTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: LDWTLSNRRTNF*SCNQDCATVWS Trigger: GGACCAGACAGTAGCACAATCCTGGTTGCAAGACCAGAAGTTTGTCCTCCTGTTGGATAGCGTCCAATCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS CCA 72 bp | GCATCTCAACTCCAACAACACAGGTTGCCCAGGAGATaGCATCACATCAAAAATATCCCACCAAGTCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: ASQLQQHRLPRR*HHIKNIPPSQR Trigger: CCTCTGACTTGGTGGGATATTTTTGATGTGATGCCATCTCCTGGGCAACCTGTGTTGTTGGAGTTGAGATGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS CCA 72 bp | AACCTACCCAGAAGCCTTTATTCCACAGGTAGCAGGTaGCAGGCAATAACTCCATCCCTAATTCTGAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: NLPRSLYSTGSR*QAITPSLILKL Trigger: CAGCTTCAGAATTAGGGATGGAGTTATTGCCTGCCACCTGCTACCTGTGGAATAAAGGCTTCTGGGTAGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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| CDS TCA 72 bp | TCTCCAGGTAGAGTTTATTCAATAGGAAAGCTGCCTTaGAGCAAGCAAAGCAGATCTTCGTCTGTTCCCCAT | + |
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Preference number: 6 (lower is better) Translates to: SPGRVYSIGKLP*SKQSRSSSVPH Trigger: ATGGGGAACAGACGAAGATCTGCTTTGCTTGCTTCAAGGCAGCTTTCCTATTGAATAAACTCTACCTGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039088.9 |
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