Pregenerated sensors for TEX15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000009628Ensembl transcript IDs: ENSMUST00000009772.8, ENSMUST00000124496.8, ENSMUST00000124501.2, ENSMUST00000149399.8
Found 162 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGTTGCCATGGAGCATAAGTCCAAGGAACTTGAGGAGGCGCACCTaGGTTAGGCGGATAAGGATATGTAGCCTGTGGGACTGGTTGATG | + |
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Preference number: 1 (lower is better) Translates to: LLPWSISPRNLRRRT*VRRIRICSLWDWLM Trigger: CATCAACCAGTCCCACAGGCTACATATCCTTATCCGCCTAACCCAGGTGCGCCTCCTCAAGTTCCTTGGACTTATGCTCCATGGCAACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR TCA 90 bp | CACTTTCAGCAGGTGACACTGAACCAAGTACTGAGCTCTGTCTTTTaGCCACTTCTGGAGATGCAGAGATGCTTTTCAGACTGTCAGAGG | + |
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Preference number: 1 (lower is better) Translates to: HFQQVTLNQVLSSVF*PLLEMQRCFSDCQR Trigger: CCTCTGACAGTCTGAAAAGCATCTCTGCATCTCCAGAAGTGGTCAAAAGACAGAGCTCAGTACTTGGTTCAGTGTCACCTGCTGAAAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR GCA 90 bp | CAGGTAAGCTGTCTGTTGGCTCTACTTTGCTTTCTGACTTTGGTGTaGAAGTGTCTTGTACACTTTCAGCAGGTGACACTGAACCAAGTA | + |
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Preference number: 1 (lower is better) Translates to: QVSCLLALLCFLTLV*KCLVHFQQVTLNQV Trigger: TACTTGGTTCAGTGTCACCTGCTGAAAGTGTACAAGACACTTGCACACCAAAGTCAGAAAGCAAAGTAGAGCCAACAGACAGCTTACCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR TCA 90 bp | TGGAGGTATATTCCTGGATGTGCCAACTTTCTGAGTCAGGACTTTTaGATTCTGTTCAGAGTGAGTGTGCTGTACTGTTCCATTCACATT | + |
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Preference number: 1 (lower is better) Translates to: WRYIPGCANFLSQDF*ILFRVSVLYCSIHI Trigger: AATGTGAATGGAACAGTACAGCACACTCACTCTGAACAGAATTCAAAAGTCCTGACTCAGAAAGTTGGCACATCCAGGAATATACCTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR CCA 90 bp | AAGAGTTATGTACTGGAGAACATGCAGACTGTGGAGGTATATTCCTaGATGTGCCAACTTTCTGAGTCAGGACTTTTGAATTCTGTTCAG | + |
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Preference number: 1 (lower is better) Translates to: KSYVLENMQTVEVYS*MCQLSESGLLNSVQ Trigger: CTGAACAGAATTCAAAAGTCCTGACTCAGAAAGTTGGCACATCCAGGAATATACCTCCACAGTCTGCATGTTCTCCAGTACATAACTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR TCA 90 bp | ATAAGGATATGTAGCCTGTGGGACTGGTTGATGAGAAGCAAACTGTaGATAAACTGGTTGTTGGTAATTGTAAGAAACAGGCGTGTGAGA | + |
|
Preference number: 1 (lower is better) Translates to: IRICSLWDWLMRSKL*INWLLVIVRNRRVR Trigger: TCTCACACGCCTGTTTCTTACAATTACCAACAACCAGTTTATTCACAGTTTGCTTCTCATCAACCAGTCCCACAGGCTACATATCCTTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR CCA 90 bp | GTAATTGTAAGAAACAGGCGTGTGAGATGGAAAATACCCGTTTCCTaGGTTAAAGGAATTTGCTTGTGGCTGTCCAGGAAAGTAACTAAA | + |
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Preference number: 1 (lower is better) Translates to: VIVRNRRVRWKIPVS*VKGICLWLSRKVTK Trigger: TTTAGTTACTTTCCTGGACAGCCACAAGCAAATTCCTTTAACCCAGGAAACGGGTATTTTCCATCTCACACGCCTGTTTCTTACAATTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR-3UTR TCA 90 bp | ATAAGTCCAAGGAACTTGAGGAGGCGCACCTGGGTTAGGCGGATAAGGATATGTGAATTCTGTTCAGAGTaGGTGTGCTGTACTGTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: ISPRNLRRRTWVRRIRICEFCSE*VCCTVP Trigger: TGGAACAGTACAGCACACTCACTCTGAACAGAATTC...ACATATCCTTATCCGCCTAACCCAGGTGCGCCTCCTCAAGTTCCTTGGACTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR CAA 90 bp | ACACTTTCAGCAGGTGACACTGAACCAAGTACTGAGCTCTGTCTTTaGACCACTTCTGGAGATGCAGAGATGCTTTTCAGACTGTCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: TLSAGDTEPSTELCL*TTSGDAEMLFRLSE Trigger: CTCTGACAGTCTGAAAAGCATCTCTGCATCTCCAGAAGTGGTCAAAAGACAGAGCTCAGTACTTGGTTCAGTGTCACCTGCTGAAAGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR CAA 90 bp | CTGAACAGTACTTGCAACTGTAGTCAACACTGGAGGAGGAGGCTGTaGTATCTCATATGCTGTCATCCCTTGGTATGTGTGAGTAACAGC | + |
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Preference number: 2 (lower is better) Translates to: LNSTCNCSQHWRRRL*YLICCHPLVCVSNS Trigger: GCTGTTACTCACACATACCAAGGGATGACAGCATATGAGATACAACAGCCTCCTCCTCCAGTGTTGACTACAGTTGCAAGTACTGTTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR-3UTR GCA 90 bp | ATAAGTCCAAGGAACTTGAGGAGGCGCACCTGGGTTAGGCGGATAAGGATATGTCATGGTGAAAGTCTGTaGCACTCAAATAAACGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: ISPRNLRRRTWVRRIRICHGESL*HSNKRP Trigger: AGGACGTTTATTTGAGTGGCACAGACTTTCACCATG...ACATATCCTTATCCGCCTAACCCAGGTGCGCCTCCTCAAGTTCCTTGGACTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR-3UTR TCA 90 bp | TTGTATCTCATATGCTGTCATCCCTTGGTATGTGTGAGTAACAGCAGTGCCATTCTGAGCTCTGTCTTTTaGCCACTTCTGGAGATGCAG | + |
|
Preference number: 2 (lower is better) Translates to: LYLICCHPLVCVSNSSAILSSVF*PLLEMQ Trigger: CTGCATCTCCAGAAGTGGTCAAAAGACAGAGCTCAG...AATGGCACTGCTGTTACTCACACATACCAAGGGATGACAGCATATGAGATACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR CAA 90 bp | AAGAATCAGGTAAGCTGTCTGTTGGCTCTACTTTGCTTTCTGACTTaGGTGTGCAAGTGTCTTGTACACTTTCAGCAGGTGACACTGAAC | + |
|
Preference number: 2 (lower is better) Translates to: KNQVSCLLALLCFLT*VCKCLVHFQQVTLN Trigger: GTTCAGTGTCACCTGCTGAAAGTGTACAAGACACTTGCACACCAAAGTCAGAAAGCAAAGTAGAGCCAACAGACAGCTTACCTGATTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR CAA 90 bp | GTGGAGGTATATTCCTGGATGTGCCAACTTTCTGAGTCAGGACTTTaGAATTCTGTTCAGAGTGAGTGTGCTGTACTGTTCCATTCACAT | + |
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Preference number: 2 (lower is better) Translates to: VEVYSWMCQLSESGL*NSVQSECAVLFHSH Trigger: ATGTGAATGGAACAGTACAGCACACTCACTCTGAACAGAATTCAAAAGTCCTGACTCAGAAAGTTGGCACATCCAGGAATATACCTCCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR-3UTR TCA 90 bp | ATGTGCCAACTTTCTGAGTCAGGACTTTTGAATTCTGTTCAGAGTGAGTGTGCTCTCTACTTTGCTTTCTaGCTTTGGTGTGCAAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: MCQLSESGLLNSVQSECALYFAF*LWCASV Trigger: GACACTTGCACACCAAAGTCAGAAAGCAAAGTAGAG...AGCACACTCACTCTGAACAGAATTCAAAAGTCCTGACTCAGAAAGTTGGCACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR-3UTR GCA 90 bp | ATGTGCCAACTTTCTGAGTCAGGACTTTTGAATTCTGTTCAGAGTGAGTGTGCTCTGTTGGCTCTACTTTaGTTTCTGACTTTGGTGTGC | + |
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Preference number: 2 (lower is better) Translates to: MCQLSESGLLNSVQSECALLALL*FLTLVC Trigger: GCACACCAAAGTCAGAAAGCAAAGTAGAGCCAACAG...AGCACACTCACTCTGAACAGAATTCAAAAGTCCTGACTCAGAAAGTTGGCACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR-3UTR CCA 90 bp | AACAGCAGTGCCATTGCTGCTGCTGTACTGATAGAAACACCAAGAGTAGTATGGTCTTTTGACCACTTCTaGAGATGCAGAGATGCTTTT | + |
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Preference number: 2 (lower is better) Translates to: NSSAIAAAVLIETPRVVWSFDHF*RCRDAF Trigger: AAAAGCATCTCTGCATCTCCAGAAGTGGTCAAAAGA...CCATACTACTCTTGGTGTTTCTATCAGTACAGCAGCAGCAATGGCACTGCTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR-3UTR CCA 90 bp | TTGTATCTCATATGCTGTCATCCCTTGGTATGTGTGAGTAACAGCAGTGCCATTGTGGAGGTATATTCCTaGATGTGCCAACTTTCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: LYLICCHPLVCVSNSSAIVEVYS*MCQLSE Trigger: CTCAGAAAGTTGGCACATCCAGGAATATACCTCCAC...AATGGCACTGCTGTTACTCACACATACCAAGGGATGACAGCATATGAGATACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR-3UTR GCA 90 bp | AACAGCAGTGCCATTGCTGCTGCTGTACTGATAGAAACACCAAGAGTAGTATGGTTTCTGACTTTGGTGTaGAAGTGTCTTGTACACTTT | + |
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Preference number: 2 (lower is better) Translates to: NSSAIAAAVLIETPRVVWFLTLV*KCLVHF Trigger: AAAGTGTACAAGACACTTGCACACCAAAGTCAGAAA...CCATACTACTCTTGGTGTTTCTATCAGTACAGCAGCAGCAATGGCACTGCTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR-3UTR CCA 90 bp | TTGTTGGTAATTGTAAGAAACAGGCGTGTGAGATGGAAAATACCCGTTTCCTGGAGATCCTGTAGTGCTTaGATGTTTGGATACTGTCTG | + |
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Preference number: 2 (lower is better) Translates to: LLVIVRNRRVRWKIPVSWRSCSA*MFGYCL Trigger: CAGACAGTATCCAAACATCCAAGCACTACAGGATCT...CCAGGAAACGGGTATTTTCCATCTCACACGCCTGTTTCTTACAATTACCAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR-3UTR CCA 90 bp | GTTAAAGGAATTTGCTTGTGGCTGTCCAGGAAAGTAACTAAAATGTTCAGAGTATCCACAGGGGTTTTATaGGATTCCTGTGCAGGTGTG | + |
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Preference number: 2 (lower is better) Translates to: VKGICLWLSRKVTKMFRVSTGVL*DSCAGV Trigger: CACACCTGCACAGGAATCCCATAAAACCCCTGTGGA...TACTCTGAACATTTTAGTTACTTTCCTGGACAGCCACAAGCAAATTCCTTTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR CAA 90 bp | TCACTTTTTATAGGCTGTGTTTTATCTACTTGCAGGACAGAAATTTaGTCCTTGATACACACAGGTTCTGGAGAGCTGGTGCCTGTACAA | + |
|
Preference number: 2 (lower is better) Translates to: SLFIGCVLSTCRTEI*SLIHTGSGELVPVQ Trigger: TTGTACAGGCACCAGCTCTCCAGAACCTGTGTGTATCAAGGACAAAATTTCTGTCCTGCAAGTAGATAAAACACAGCCTATAAAAAGTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR-3UTR TCA 90 bp | ATGTGCCAACTTTCTGAGTCAGGACTTTTGAATTCTGTTCAGAGTGAGTGTGCTTTTCTCTATGACATTTaGGTTTTCCTGCTGTTCAGT | + |
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Preference number: 2 (lower is better) Translates to: MCQLSESGLLNSVQSECAFLYDI*VFLLFS Trigger: ACTGAACAGCAGGAAAACTCAAATGTCATAGAGAAA...AGCACACTCACTCTGAACAGAATTCAAAAGTCCTGACTCAGAAAGTTGGCACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR CAA 90 bp | ATTTTGTTTTCATCATTGGGAGGAGATCCTGTAGTGCTTGGATGTTaGGATACTGTCTGTATATTTCCAACATCTTTCATGGTAACCTTT | + |
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Preference number: 2 (lower is better) Translates to: ILFSSLGGDPVVLGC*DTVCIFPTSFMVTF Trigger: AAAGGTTACCATGAAAGATGTTGGAAATATACAGACAGTATCCAAACATCCAAGCACTACAGGATCTCCTCCCAATGATGAAAACAAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR-3UTR GCA 90 bp | GTTAAAGGAATTTGCTTGTGGCTGTCCAGGAAAGTAACTAAAATGTTCAGAGTATGTGTTTTATCTACTTaGAGGACAGAAATTTTGTCC | + |
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Preference number: 2 (lower is better) Translates to: VKGICLWLSRKVTKMFRVCVLST*RTEILS Trigger: GGACAAAATTTCTGTCCTGCAAGTAGATAAAACACA...TACTCTGAACATTTTAGTTACTTTCCTGGACAGCCACAAGCAAATTCCTTTAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR CCA 72 bp | TGGAGCATAAGTCCAAGGAACTTGAGGAGGCGCACCTaGGTTAGGCGGATAAGGATATGTAGCCTGTGGGAC | + |
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Preference number: 3 (lower is better) Translates to: WSISPRNLRRRT*VRRIRICSLWD Trigger: GTCCCACAGGCTACATATCCTTATCCGCCTAACCCAGGTGCGCCTCCTCAAGTTCCTTGGACTTATGCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR TCA 72 bp | TTCCAACTGGGAACAGTGTCTGTATTTCCTTTTCCCTaGGAGACTTCACATGTGTCTGCAGTCACAGGTCGC | + |
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Preference number: 3 (lower is better) Translates to: FQLGTVSVFPFP*ETSHVSAVTGR Trigger: GCGACCTGTGACTGCAGACACATGTGAAGTCTCTCAGGGAAAAGGAAATACAGACACTGTTCCCAGTTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR-3UTR CAA 90 bp | ATAAGTCCAAGGAACTTGAGGAGGCGCACCTGGGTTAGGCGGATAAGGATATGTTCTGTTGGCTCTACTTaGCTTTCTGACTTTGGTGTG | + |
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Preference number: 3 (lower is better) Translates to: ISPRNLRRRTWVRRIRICSVGST*LSDFGV Trigger: CACACCAAAGTCAGAAAGCAAAGTAGAGCCAACAGA...ACATATCCTTATCCGCCTAACCCAGGTGCGCCTCCTCAAGTTCCTTGGACTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR-3UTR CAA 90 bp | GGGATTCCTGTGCAGGTGTGTGGTCAGGTGAGTAAGAGGCATCTATATCCTTTTCAGGTAAGCTGTCTGTaGGCTCTACTTTGCTTTCTG | + |
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Preference number: 3 (lower is better) Translates to: GIPVQVCGQVSKRHLYPFQVSCL*ALLCFL Trigger: CAGAAAGCAAAGTAGAGCCAACAGACAGCTTACCTG...AAAAGGATATAGATGCCTCTTACTCACCTGACCACACACCTGCACAGGAATCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR TCA 72 bp | CAGGTGACACTGAACCAAGTACTGAGCTCTGTCTTTTaGCCACTTCTGGAGATGCAGAGATGCTTTTCAGAC | + |
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Preference number: 3 (lower is better) Translates to: QVTLNQVLSSVF*PLLEMQRCFSD Trigger: GTCTGAAAAGCATCTCTGCATCTCCAGAAGTGGTCAAAAGACAGAGCTCAGTACTTGGTTCAGTGTCACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR TCA 72 bp | TTTCCTGCTGTTAGGTTTGAAGGAGAGATCTGTGTGTaGTCCACAGGGGTTTTATGGGATTCCTGTGCAGGT | + |
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Preference number: 3 (lower is better) Translates to: FPAVRFEGEICV*STGVLWDSCAG Trigger: ACCTGCACAGGAATCCCATAAAACCCCTGTGGATCACACACAGATCTCTCCTTCAAACCTAACAGCAGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR-3UTR CAA 90 bp | AACAGCAGTGCCATTGCTGCTGCTGTACTGATAGAAACACCAAGAGTAGTATGGTTCCTGCTGTTAGGTTaGAAGGAGAGATCTGTGTGT | + |
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Preference number: 3 (lower is better) Translates to: NSSAIAAAVLIETPRVVWFLLLG*KERSVC Trigger: ACACACAGATCTCTCCTTCAAACCTAACAGCAGGAA...CCATACTACTCTTGGTGTTTCTATCAGTACAGCAGCAGCAATGGCACTGCTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR TCA 72 bp | GGTTTTATGGGATTCCTGTGCAGGTGTGTGGTCAGGTaGGTAAGAGGCATCTATATCCTTTTGGTCACAAGT | + |
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Preference number: 3 (lower is better) Translates to: GFMGFLCRCVVR*VRGIYILLVTS Trigger: ACTTGTGACCAAAAGGATATAGATGCCTCTTACTCACCTGACCACACACCTGCACAGGAATCCCATAAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR GCA 72 bp | TGTCTGTTGGCTCTACTTTGCTTTCTGACTTTGGTGTaGAAGTGTCTTGTACACTTTCAGCAGGTGACACTG | + |
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Preference number: 3 (lower is better) Translates to: CLLALLCFLTLV*KCLVHFQQVTL Trigger: CAGTGTCACCTGCTGAAAGTGTACAAGACACTTGCACACCAAAGTCAGAAAGCAAAGTAGAGCCAACAGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR CCA 72 bp | TGTGCTCTGAACAGTACTTGCAACTGTAGTCAACACTaGAGGAGGAGGCTGTTGTATCTCATATGCTGTCAT | + |
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Preference number: 3 (lower is better) Translates to: CALNSTCNCSQH*RRRLLYLICCH Trigger: ATGACAGCATATGAGATACAACAGCCTCCTCCTCCAGTGTTGACTACAGTTGCAAGTACTGTTCAGAGCACA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR CCA 72 bp | AGAAACAGGCGTGTGAGATGGAAAATACCCGTTTCCTaGGTTAAAGGAATTTGCTTGTGGCTGTCCAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: RNRRVRWKIPVS*VKGICLWLSRK Trigger: TTTCCTGGACAGCCACAAGCAAATTCCTTTAACCCAGGAAACGGGTATTTTCCATCTCACACGCCTGTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR TCA 72 bp | ATTCCTGGATGTGCCAACTTTCTGAGTCAGGACTTTTaGATTCTGTTCAGAGTGAGTGTGCTGTACTGTTCC | + |
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Preference number: 3 (lower is better) Translates to: IPGCANFLSQDF*ILFRVSVLYCS Trigger: GGAACAGTACAGCACACTCACTCTGAACAGAATTCAAAAGTCCTGACTCAGAAAGTTGGCACATCCAGGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR CCA 72 bp | GTACTGGAGAACATGCAGACTGTGGAGGTATATTCCTaGATGTGCCAACTTTCTGAGTCAGGACTTTTGAAT | + |
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Preference number: 3 (lower is better) Translates to: VLENMQTVEVYS*MCQLSESGLLN Trigger: ATTCAAAAGTCCTGACTCAGAAAGTTGGCACATCCAGGAATATACCTCCACAGTCTGCATGTTCTCCAGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR CCA 72 bp | TGCAGAAGAGTTATGTACTGGAGAACATGCAGACTGTaGAGGTATATTCCTGGATGTGCCAACTTTCTGAGT | + |
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Preference number: 3 (lower is better) Translates to: CRRVMYWRTCRL*RYIPGCANFLS Trigger: ACTCAGAAAGTTGGCACATCCAGGAATATACCTCCACAGTCTGCATGTTCTCCAGTACATAACTCTTCTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR-3UTR CAA 90 bp | ATGTGCCAACTTTCTGAGTCAGGACTTTTGAATTCTGTTCAGAGTGAGTGTGCTCTTTGCTTTCTGACTTaGGTGTGCAAGTGTCTTGTA | + |
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Preference number: 3 (lower is better) Translates to: MCQLSESGLLNSVQSECALCFLT*VCKCLV Trigger: TACAAGACACTTGCACACCAAAGTCAGAAAGCAAAG...AGCACACTCACTCTGAACAGAATTCAAAAGTCCTGACTCAGAAAGTTGGCACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR TCA 72 bp | TGTAGCCTGTGGGACTGGTTGATGAGAAGCAAACTGTaGATAAACTGGTTGTTGGTAATTGTAAGAAACAGG | + |
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Preference number: 3 (lower is better) Translates to: CSLWDWLMRSKL*INWLLVIVRNR Trigger: CCTGTTTCTTACAATTACCAACAACCAGTTTATTCACAGTTTGCTTCTCATCAACCAGTCCCACAGGCTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR CCA 72 bp | TGGTTGTTGGTAATTGTAAGAAACAGGCGTGTGAGATaGAAAATACCCGTTTCCTGGGTTAAAGGAATTTGC | + |
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Preference number: 3 (lower is better) Translates to: WLLVIVRNRRVR*KIPVSWVKGIC Trigger: GCAAATTCCTTTAACCCAGGAAACGGGTATTTTCCATCTCACACGCCTGTTTCTTACAATTACCAACAACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR-3UTR CAA 90 bp | ATGTGCCAACTTTCTGAGTCAGGACTTTTGAATTCTGTTCAGAGTGAGTGTGCTCTGTGTTTTATCTACTaGCAGGACAGAAATTTTGTC | + |
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Preference number: 3 (lower is better) Translates to: MCQLSESGLLNSVQSECALCFIY*QDRNFV Trigger: GACAAAATTTCTGTCCTGCAAGTAGATAAAACACAG...AGCACACTCACTCTGAACAGAATTCAAAAGTCCTGACTCAGAAAGTTGGCACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR TCA 72 bp | AAATGTTCAGAGTATGAACGATTGAAATGTGTGCTCTaGACAGTACTTGCAACTGTAGTCAACACTGGAGGA | + |
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Preference number: 3 (lower is better) Translates to: KCSEYERLKCVL*TVLATVVNTGG Trigger: TCCTCCAGTGTTGACTACAGTTGCAAGTACTGTTCAGAGCACACATTTCAATCGTTCATACTCTGAACATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR TCA 72 bp | TGGCTGTCCAGGAAAGTAACTAAAATGTTCAGAGTATaGACGATTGAAATGTGTGCTCTGAACAGTACTTGC | + |
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Preference number: 3 (lower is better) Translates to: WLSRKVTKMFRV*TIEMCALNSTC Trigger: GCAAGTACTGTTCAGAGCACACATTTCAATCGTTCATACTCTGAACATTTTAGTTACTTTCCTGGACAGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR GCA 72 bp | AGATGGAAAATACCCGTTTCCTGGGTTAAAGGAATTTaGTTGTGGCTGTCCAGGAAAGTAACTAAAATGTTC | + |
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Preference number: 3 (lower is better) Translates to: RWKIPVSWVKGI*LWLSRKVTKMF Trigger: GAACATTTTAGTTACTTTCCTGGACAGCCACAAGCAAATTCCTTTAACCCAGGAAACGGGTATTTTCCATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR CCA 72 bp | TTTGTTTTCATCATTGGGAGGAGATCCTGTAGTGCTTaGATGTTTGGATACTGTCTGTATATTTCCAACATC | + |
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Preference number: 3 (lower is better) Translates to: FVFIIGRRSCSA*MFGYCLYISNI Trigger: GATGTTGGAAATATACAGACAGTATCCAAACATCCAAGCACTACAGGATCTCCTCCCAATGATGAAAACAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| 3UTR CCA 72 bp | AAAATACCCGTTTCCTGGGTTAAAGGAATTTGCTTGTaGCTGTCCAGGAAAGTAACTAAAATGTTCAGAGTA | + |
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Preference number: 3 (lower is better) Translates to: KIPVSWVKGICL*LSRKVTKMFRV Trigger: TACTCTGAACATTTTAGTTACTTTCCTGGACAGCCACAAGCAAATTCCTTTAACCCAGGAAACGGGTATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| CDS-3UTR GCA 90 bp | ATAAGTCCAAGGAACTTGAGGAGGCGCACCTGGGTTAGGCGGATAAGGATATGTAACTGCCATGTGAACTaGAGGTCACAGCTCATATCC | + |
|
Preference number: 4 (lower is better) Translates to: ISPRNLRRRTWVRRIRICNCHVN*RSQLIS Trigger: GGATATGAGCTGTGACCTGCAGTTCACATGGCAGTT...ACATATCCTTATCCGCCTAACCCAGGTGCGCCTCCTCAAGTTCCTTGGACTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
||
| 3UTR CAA 72 bp | CAGGCACAAGAGGGTCATCATTTCCTGCTGTTAGGTTaGAAGGAGAGATCTGTGTGTGATCCACAGGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QAQEGHHFLLLG*KERSVCDPQGF Trigger: AAACCCCTGTGGATCACACACAGATCTCTCCTTCAAACCTAACAGCAGGAAATGATGACCCTCTTGTGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
||
| CDS-3UTR TCA 90 bp | TTGTATCTCATATGCTGTCATCCCTTGGTATGTGTGAGTAACAGCAGTGCCATTCCCCAAACTGCCATGTaGACTGCAGGTCACAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LYLICCHPLVCVSNSSAIPQTAM*TAGHSS Trigger: TGAGCTGTGACCTGCAGTTCACATGGCAGTTTGGGG...AATGGCACTGCTGTTACTCACACATACCAAGGGATGACAGCATATGAGATACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
||
| CDS-3UTR TCA 90 bp | ATGTGCCAACTTTCTGAGTCAGGACTTTTGAATTCTGTTCAGAGTGAGTGTGCTACCCTCACGCATCTCTaGCCTCTTAGCAGCAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: MCQLSESGLLNSVQSECATLTHL*PLSSKL Trigger: CAGTTTGCTGCTAAGAGGTCAGAGATGCGTGAGGGT...AGCACACTCACTCTGAACAGAATTCAAAAGTCCTGACTCAGAAAGTTGGCACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
||
| 3UTR CAA 72 bp | GCAGGTGACACTGAACCAAGTACTGAGCTCTGTCTTTaGACCACTTCTGGAGATGCAGAGATGCTTTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AGDTEPSTELCL*TTSGDAEMLFR Trigger: TCTGAAAAGCATCTCTGCATCTCCAGAAGTGGTCAAAAGACAGAGCTCAGTACTTGGTTCAGTGTCACCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
||
| 3UTR CAA 72 bp | ACTTGCAACTGTAGTCAACACTGGAGGAGGAGGCTGTaGTATCTCATATGCTGTCATCCCTTGGTATGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TCNCSQHWRRRL*YLICCHPLVCV Trigger: CACACATACCAAGGGATGACAGCATATGAGATACAACAGCCTCCTCCTCCAGTGTTGACTACAGTTGCAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
||
| CDS-3UTR CCA 90 bp | CTTTGCTTTCTGACTTTGGTGTGCAAGTGTCTTGTACACTTTCAGCAGGTGACAATTTCTTCCCAGCACTaGCTTCTGCGTCCATATTCC | + |
|
Preference number: 4 (lower is better) Translates to: LCFLTLVCKCLVHFQQVTISSQH*LLRPYS Trigger: GGAATATGGACGCAGAAGCCAGTGCTGGGAAGAAAT...TGTCACCTGCTGAAAGTGTACAAGACACTTGCACACCAAAGTCAGAAAGCAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
||
| CDS-3UTR CCA 90 bp | CTTTGCTTTCTGACTTTGGTGTGCAAGTGTCTTGTACACTTTCAGCAGGTGACACTTCTACTGCAAGCATaGCTCAGGGCAATGTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: LCFLTLVCKCLVHFQQVTLLLQA*LRAMST Trigger: TGTTGACATTGCCCTGAGCCATGCTTGCAGTAGAAG...TGTCACCTGCTGAAAGTGTACAAGACACTTGCACACCAAAGTCAGAAAGCAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
||
| 3UTR CAA 72 bp | GTAAGCTGTCTGTTGGCTCTACTTTGCTTTCTGACTTaGGTGTGCAAGTGTCTTGTACACTTTCAGCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VSCLLALLCFLT*VCKCLVHFQQV Trigger: CACCTGCTGAAAGTGTACAAGACACTTGCACACCAAAGTCAGAAAGCAAAGTAGAGCCAACAGACAGCTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
||
| CDS-3UTR TCA 90 bp | TTGCAGGACAGAAATTTTGTCCTTGATACACACAGGTTCTGGAGAGCTGGTGCCCCATTACCTGCCTTTTaGCCAATACATTTCACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LQDRNFVLDTHRFWRAGAPLPAF*PIHFTV Trigger: AACAGTGAAATGTATTGGTCAAAAGGCAGGTAATGG...GGCACCAGCTCTCCAGAACCTGTGTGTATCAAGGACAAAATTTCTGTCCTGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
||
| CDS-3UTR GCA 90 bp | GTTAAAGGAATTTGCTTGTGGCTGTCCAGGAAAGTAACTAAAATGTTCAGAGTAAAACCCCAGGTTGACTaGTGTCCTCCCCAGGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VKGICLWLSRKVTKMFRVKPQVD*CPPQVL Trigger: CAGAACCTGGGGAGGACAGCAGTCAACCTGGGGTTT...TACTCTGAACATTTTAGTTACTTTCCTGGACAGCCACAAGCAAATTCCTTTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
||
| CDS-3UTR GCA 90 bp | TTCAGACTGTCAGAGGAATTTGATCCTATTTTGTTTTCATCATTGGGAGGAGATCAGCCACGCTTCTACTaGAAGCATGGCTCAGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FRLSEEFDPILFSSLGGDQPRFY*KHGSGQ Trigger: TTGCCCTGAGCCATGCTTGCAGTAGAAGCGTGGCTG...ATCTCCTCCCAATGATGAAAACAAAATAGGATCAAATTCCTCTGACAGTCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
||
| 3UTR CAA 72 bp | GCTAAAGAATCAGGTAAGCTGTCTGTTGGCTCTACTTaGCTTTCTGACTTTGGTGTGCAAGTGTCTTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: AKESGKLSVGST*LSDFGVQVSCT Trigger: TGTACAAGACACTTGCACACCAAAGTCAGAAAGCAAAGTAGAGCCAACAGACAGCTTACCTGATTCTTTAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
||
| CDS-3UTR GCA 90 bp | ATGGATATGAAGTTCCAAATGAATGTGCAGAAGAGTTATGTACTGGAGAACATGAGCTCATATCCAGCCTaGACTGCTTCAGAGTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: MDMKFQMNVQKSYVLENMSSYPA*TASECH Trigger: ATGGCACTCTGAAGCAGTGCAGGCTGGATATGAGCT...CATGTTCTCCAGTACATAACTCTTCTGCACATTCATTTGGAACTTCATATCCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
||
| CDS-3UTR GCA 90 bp | GTTAAAGGAATTTGCTTGTGGCTGTCCAGGAAAGTAACTAAAATGTTCAGAGTATTTGTTTCCCCAAACTaGCATGTGAACTGCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VKGICLWLSRKVTKMFRVFVSPN*HVNCRS Trigger: TGACCTGCAGTTCACATGGCAGTTTGGGGAAACAAA...TACTCTGAACATTTTAGTTACTTTCCTGGACAGCCACAAGCAAATTCCTTTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
||
| 3UTR CAA 72 bp | TGGAAAATACCCGTTTCCTGGGTTAAAGGAATTTGCTaGTGGCTGTCCAGGAAAGTAACTAAAATGTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: WKIPVSWVKGIC*WLSRKVTKMFR Trigger: TCTGAACATTTTAGTTACTTTCCTGGACAGCCACAAGCAAATTCCTTTAACCCAGGAAACGGGTATTTTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
||
| CDS-3UTR GCA 90 bp | TTGTATCTCATATGCTGTCATCCCTTGGTATGTGTGAGTAACAGCAGTGCCATTTTTCACTGTTACTATTaGATATGGAAGACATTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LYLICCHPLVCVSNSSAIFHCYY*IWKTLP Trigger: AGGCAATGTCTTCCATATGCAATAGTAACAGTGAAA...AATGGCACTGCTGTTACTCACACATACCAAGGGATGACAGCATATGAGATACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
||
| CDS-3UTR CCA 90 bp | GTTAAAGGAATTTGCTTGTGGCTGTCCAGGAAAGTAACTAAAATGTTCAGAGTAAGGCTTGTAGCTCAATaGTATCTTTCAGAGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VKGICLWLSRKVTKMFRVRLVAQ*YLSEKA Trigger: TGCCTTCTCTGAAAGATACCATTGAGCTACAAGCCT...TACTCTGAACATTTTAGTTACTTTCCTGGACAGCCACAAGCAAATTCCTTTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
||
| CDS-3UTR CCA 90 bp | ATGTGCCAACTTTCTGAGTCAGGACTTTTGAATTCTGTTCAGAGTGAGTGTGCTTGTTACTATTGCATATaGAAGACATTGCCTAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: MCQLSESGLLNSVQSECACYYCI*KTLPRF Trigger: AAACCTAGGCAATGTCTTCCATATGCAATAGTAACA...AGCACACTCACTCTGAACAGAATTCAAAAGTCCTGACTCAGAAAGTTGGCACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
||
| CDS-3UTR GCA 90 bp | ATGGATATGAAGTTCCAAATGAATGTGCAGAAGAGTTATGTACTGGAGAACATGGCATATGGAAGACATTaGCTAGGTTTATCTACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: MDMKFQMNVQKSYVLENMAYGRH*LGLSTG Trigger: ACCAGTAGATAAACCTAGGCAATGTCTTCCATATGC...CATGTTCTCCAGTACATAACTCTTCTGCACATTCATTTGGAACTTCATATCCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
||
| CDS-3UTR GCA 90 bp | TTCAGACTGTCAGAGGAATTTGATCCTATTTTGTTTTCATCATTGGGAGGAGATTCTTGTCTGTTTTGTTaGAAAGCATTCCAAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FRLSEEFDPILFSSLGGDSCLFC*KAFQAS Trigger: AGAGGCTTGGAATGCTTTGCAACAAAACAGACAAGA...ATCTCCTCCCAATGATGAAAACAAAATAGGATCAAATTCCTCTGACAGTCTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
||
| CDS-3UTR CAA 90 bp | AACAGCAGTGCCATTGCTGCTGCTGTACTGATAGAAACACCAAGAGTAGTATGGCTCAGAAACCCCAGGTaGACTGCTGTCCTCCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NSSAIAAAVLIETPRVVWLRNPR*TAVLPR Trigger: CCTGGGGAGGACAGCAGTCAACCTGGGGTTTCTGAG...CCATACTACTCTTGGTGTTTCTATCAGTACAGCAGCAGCAATGGCACTGCTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
||
| CDS TCA 90 bp | CCAGATATTCATTTCGAACCAGTTTTGTTTCCCCAAACTGCCATGTaGACTGCAGGTCACAGCTCATATCCAGCCTGCACTGCTTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PDIHFEPVLFPQTAM*TAGHSSYPACTASE Trigger: CTCTGAAGCAGTGCAGGCTGGATATGAGCTGTGACCTGCAGTTCACATGGCAGTTTGGGGAAACAAAACTGGTTCGAAATGAATATCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000124496.8 ENSMUST00000124501.2 ENSMUST00000149399.8 |
||
| CDS GCA 90 bp | GAAAACCAGGGTAGAAATTGGACTGCAGTTGATATCCACGTGGCCTaGGAAGCAGTTCACTGTACAAGCTCTCATCATACCAAAGCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: ENQGRNWTAVDIHVA*EAVHCTSSHHTKAS Trigger: GCTTGCTTTGGTATGATGAGAGCTTGTACAGTGAACTGCTTCGCAGGCCACGTGGATATCAACTGCAGTCCAATTTCTACCCTGGTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009772.8 |
||
| CDS GCA 90 bp | TATTCATTTCGAACCAGTTTTGTTTCCCCAAACTGCCATGTGAACTaGAGGTCACAGCTCATATCCAGCCTGCACTGCTTCAGAGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: YSFRTSFVSPNCHVN*RSQLISSLHCFRVP Trigger: TGGCACTCTGAAGCAGTGCAGGCTGGATATGAGCTGTGACCTGCAGTTCACATGGCAGTTTGGGGAAACAAAACTGGTTCGAAATGAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000124496.8 ENSMUST00000124501.2 ENSMUST00000149399.8 |
||
| CDS CCA 90 bp | CAATGTGTTTGGGTGTCACCAACAGAAAGGGAAACCACTTCTTCTTaGCAGCCAATTAGCTCAGGAAGAAGAGACCAATCGAACCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: QCVWVSPTERETTSS*QPISSGRRDQSNQS Trigger: GCTCTGGTTCGATTGGTCTCTTCTTCCTGAGCTAATTGGCTGCCAAGAAGAAGTGGTTTCCCTTTCTGTTGGTGACACCCAAACACATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009772.8 |
||
| CDS GCA 90 bp | CGGAGTTCCGTGACTCACTGCTCAGAGCTGTTAAAACTGGGACATTaGTTCTCATTTGAGCTCTCTGGACCTGTTCTTCACTGTGTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: RSSVTHCSELLKLGH*FSFELSGPVLHCVF Trigger: AAAAACACAGTGAAGAACAGGTCCAGAGAGCTCAAATGAGAAGCAATGTCCCAGTTTTAACAGCTCTGAGCAGTGAGTCACGGAACTCCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009772.8 ENSMUST00000124496.8 |
||
| CDS CCA 90 bp | GTGCTGTCTTCTGTGCTGATGGAGGCTCTCATCATTCCCGTATCTTaGATGTATTCACATAGATTTCCTTTCTTCTGGGCTGGGAAGACT | + |
|
Preference number: 5 (lower is better) Translates to: VLSSVLMEALIIPVS*MYSHRFPFFWAGKT Trigger: AGTCTTCCCAGCCCAGAAGAAAGGAAATCTATGTGAATACATCCAAGATACGGGAATGATGAGAGCCTCCATCAGCACAGAAGACAGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009772.8 ENSMUST00000124496.8 |
||
| CDS CCA 90 bp | TCCTTGAAAACCAGGGTAGAAATTGGACTGCAGTTGATATCCACGTaGCCTGCGAAGCAGTTCACTGTACAAGCTCTCATCATACCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SLKTRVEIGLQLIST*PAKQFTVQALIIPK Trigger: CTTTGGTATGATGAGAGCTTGTACAGTGAACTGCTTCGCAGGCCACGTGGATATCAACTGCAGTCCAATTTCTACCCTGGTTTTCAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009772.8 |
||
| CDS-3UTR CAA 90 bp | ATAAGTCCAAGGAACTTGAGGAGGCGCACCTGGGTTAGGCGGATAAGGATATGTTCACTGTCTGGGCTCTaGTACTTATCATTATCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: ISPRNLRRRTWVRRIRICSLSGL*YLSLSF Trigger: GAACGATAATGATAAGTACAAGAGCCCAGACAGTGA...ACATATCCTTATCCGCCTAACCCAGGTGCGCCTCCTCAAGTTCCTTGGACTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
||
| CDS CCA 90 bp | CCCAGCACTGGCTTCTGCGTCCATATTCCACAGAGATTCACTGTCTaGGCTCTTGTACTTATCATTATCGTTCATTTCCATGTTGTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: PSTGFCVHIPQRFTV*ALVLIIIVHFHVVG Trigger: TCCAACAACATGGAAATGAACGATAATGATAAGTACAAGAGCCCAGACAGTGAATCTCTGTGGAATATGGACGCAGAAGCCAGTGCTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124496.8 ENSMUST00000124501.2 ENSMUST00000149399.8 |
||
| CDS-3UTR CAA 90 bp | AACAGCAGTGCCATTGCTGCTGCTGTACTGATAGAAACACCAAGAGTAGTATGGCATTTCGAACCAGTTTaGTTTCCCCAAACTGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: NSSAIAAAVLIETPRVVWHFEPV*FPQTAM Trigger: CATGGCAGTTTGGGGAAACAAAACTGGTTCGAAATG...CCATACTACTCTTGGTGTTTCTATCAGTACAGCAGCAGCAATGGCACTGCTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
||
| CDS GCA 90 bp | CGTTGCTACAAGTATTTTCTGATTCATCGGAGTTCCGTGACTCACTaGTCAGAGCTGTTAAAACTGGGACATTGCTTCTCATTTGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RCYKYFLIHRSSVTH*SELLKLGHCFSFEL Trigger: GAGCTCAAATGAGAAGCAATGTCCCAGTTTTAACAGCTCTGAGCAGTGAGTCACGGAACTCCGATGAATCAGAAAATACTTGTAGCAACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009772.8 ENSMUST00000124496.8 |
||
| CDS CCA 90 bp | TTCCTAATGTGCTTCTCTGACTGCGAAAATGTTTTAATTCGTCCTTaGGATAAGGAAGAGAAACGGTCAGATGAGCCATGGCTTGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: FLMCFSDCENVLIRP*DKEEKRSDEPWLVG Trigger: GCCAACAAGCCATGGCTCATCTGACCGTTTCTCTTCCTTATCCCAAGGACGAATTAAAACATTTTCGCAGTCAGAGAAGCACATTAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009772.8 |
||
| CDS CCA 90 bp | AGAATGCATTGTATTTTAGTCGTCCTTGAAAACCAGGGTAGAAATTaGACTGCAGTTGATATCCACGTGGCCTGCGAAGCAGTTCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: RMHCILVVLENQGRN*TAVDIHVACEAVHC Trigger: ACAGTGAACTGCTTCGCAGGCCACGTGGATATCAACTGCAGTCCAATTTCTACCCTGGTTTTCAAGGACGACTAAAATACAATGCATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009772.8 |
||
| CDS-3UTR CAA 90 bp | AACAGCAGTGCCATTGCTGCTGCTGTACTGATAGAAACACCAAGAGTAGTATGGTGCATATGGAAGACATaGCCTAGGTTTATCTACTGG | + |
|
Preference number: 5 (lower is better) Translates to: NSSAIAAAVLIETPRVVWCIWKT*PRFIYW Trigger: CCAGTAGATAAACCTAGGCAATGTCTTCCATATGCA...CCATACTACTCTTGGTGTTTCTATCAGTACAGCAGCAGCAATGGCACTGCTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
||
| CDS-3UTR CAA 90 bp | AAGTGTCTTGTACACTTTCAGCAGGTGACACTGAACCAAGTACTGAGCTCTGTCTTCTTGTCTGTTTTGTaGCAAAGCATTCCAAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: KCLVHFQQVTLNQVLSSVFLSVL*QSIPSL Trigger: GAGGCTTGGAATGCTTTGCAACAAAACAGACAAGAA...GACAGAGCTCAGTACTTGGTTCAGTGTCACCTGCTGAAAGTGTACAAGACACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
||
| CDS-3UTR CAA 90 bp | CTCTGTCTTTTGACCACTTCTGGAGATGCAGAGATGCTTTTCAGACTGTCAGAGTCCATTACCTGCCTTTaGACCAATACATTTCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: LCLLTTSGDAEMLFRLSESITCL*TNTFHC Trigger: ACAGTGAAATGTATTGGTCAAAAGGCAGGTAATGGA...CTCTGACAGTCTGAAAAGCATCTCTGCATCTCCAGAAGTGGTCAAAAGACAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
||
| CDS GCA 90 bp | TCACAAAATTCTCTCACATGGAAAGTGGTAAGACTACTGGAAACATaGCCAGACATGACTTCATTAGAAAGGCACTCTGCAATCCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SQNSLTWKVVRLLET*PDMTSLERHSAILS Trigger: AGAGAGGATTGCAGAGTGCCTTTCTAATGAAGTCATGTCTGGGCATGTTTCCAGTAGTCTTACCACTTTCCATGTGAGAGAATTTTGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009772.8 |
||
| CDS GCA 90 bp | ACCATATTCATAGATAACAGCCAGCTCTTTCTTAAGGACAGAAATTaGAGTCTCTACCAGTTTCCAAAGGCAATGTGTTTGGGTGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: TIFIDNSQLFLKDRN*SLYQFPKAMCLGVT Trigger: GGTGACACCCAAACACATTGCCTTTGGAAACTGGTAGAGACTGCAATTTCTGTCCTTAAGAAAGAGCTGGCTGTTATCTATGAATATGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009772.8 |
||
| CDS GCA 90 bp | TTGCACATGAAAAACTTGAATTTTCTCCAGAAGGTTGGGAGCACATaGCAAATCCAGAAGCATTCCCTTCCTTATTTGTTTCTGGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LHMKNLNFLQKVGST*QIQKHSLPYLFLVL Trigger: CAGAACCAGAAACAAATAAGGAAGGGAATGCTTCTGGATTTGGCATGTGCTCCCAACCTTCTGGAGAAAATTCAAGTTTTTCATGTGCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000009772.8 ENSMUST00000124496.8 |
||
| CDS CCA 90 bp | AACTGTGGTTCTGGAAACTGTTCTTCATCACAAAATTCTCTCACATaGAAAGTGGTAAGACTACTGGAAACATGCCCAGACATGACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: NCGSGNCSSSQNSLT*KVVRLLETCPDMTS Trigger: TGAAGTCATGTCTGGGCATGTTTCCAGTAGTCTTACCACTTTCCATGTGAGAGAATTTTGTGATGAAGAACAGTTTCCAGAACCACAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009772.8 |
||
| CDS CCA 90 bp | TTAAAAATCATAATACTTTCTACAGCCACGCTTCTACTGCAAGCATaGCTCAGGGCAATGTCAACATGTCTACACAGATACACTCCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LKIIILSTATLLLQA*LRAMSTCLHRYTPR Trigger: TCTTGGAGTGTATCTGTGTAGACATGTTGACATTGCCCTGAGCCATGCTTGCAGTAGAAGCGTGGCTGTAGAAAGTATTATGATTTTTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000124496.8 ENSMUST00000124501.2 |
||
| CDS GCA 90 bp | ACCACAACCCAAACTCTTATCCAATGGCAAAACATCACTCAAACCTaGAGTATCACTTTTGTTTCTCATGCTCTGTTCTCTCTTCATAAG | + |
|
Preference number: 5 (lower is better) Translates to: TTTQTLIQWQNITQT*SITFVSHALFSLHK Trigger: CTTATGAAGAGAGAACAGAGCATGAGAAACAAAAGTGATACTGCAGGTTTGAGTGATGTTTTGCCATTGGATAAGAGTTTGGGTTGTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009772.8 ENSMUST00000124496.8 |
||
| CDS GCA 90 bp | GAAAGGCACTCTGCAATCCTCTCTCTGTTTGTTCTATATAATCTGTaGTTTGATACCGGGGTCAATGACTCCTCAATGTCAAATCTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: ERHSAILSLFVLYNL*FDTGVNDSSMSNLK Trigger: TTTAAGATTTGACATTGAGGAGTCATTGACCCCGGTATCAAAGCACAGATTATATAGAACAAACAGAGAGAGGATTGCAGAGTGCCTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009772.8 |
||
| CDS CCA 90 bp | CTACTAACAGTTTCATTACTAAGAACAGTTTCTTTGCACCAAGTATaGTTTACTCCATCTTTAGTGCTGTCTTCTGTGCTGATGGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LLTVSLLRTVSLHQV*FTPSLVLSSVLMEA Trigger: AGCCTCCATCAGCACAGAAGACAGCACTAAAGATGGAGTAAACCATACTTGGTGCAAAGAAACTGTTCTTAGTAATGAAACTGTTAGTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009772.8 ENSMUST00000124496.8 |
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| CDS-3UTR CAA 90 bp | TTGTTGGTAATTGTAAGAAACAGGCGTGTGAGATGGAAAATACCCGTTTCCTGGGGATCCAGAGAAACTTaGTTTTTATCCATAGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LLVIVRNRRVRWKIPVSWGSRET*FLSIEG Trigger: ACCTTCTATGGATAAAAACAAAGTTTCTCTGGATCC...CCAGGAAACGGGTATTTTCCATCTCACACGCCTGTTTCTTACAATTACCAACAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| CDS TCA 90 bp | TGCAAAGCATTCCTTTTGTTGCGCAGCATTTGGAGAAAGAGAAGATaGGTGGACAATTTAGTATCTTTAGCACTTAGCAGCTTCATATGT | + |
|
Preference number: 5 (lower is better) Translates to: CKAFLLLRSIWRKRR*VDNLVSLALSSFIC Trigger: ACATATGAAGCTGCTAAGTGCTAAAGATACTAAATTGTCCACTCATCTTCTCTTTCTCCAAATGCTGCGCAACAAAAGGAATGCTTTGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009772.8 |
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| CDS TCA 90 bp | GAGGAGAATCTCAGTGATGTTATAAGCTGTCCATTACCTGCCTTTTaGCCAATACATTTCACTGTTACTATTGCATATGGAAGACATTGC | + |
|
Preference number: 5 (lower is better) Translates to: EENLSDVISCPLPAF*PIHFTVTIAYGRHC Trigger: GCAATGTCTTCCATATGCAATAGTAACAGTGAAATGTATTGGTCAAAAGGCAGGTAATGGACAGCTTATAACATCACTGAGATTCTCCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124496.8 ENSMUST00000124501.2 |
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| CDS GCA 90 bp | CATTTTCATTTTCCCTCCGGACACATGTATATTCTCCAATTATGTTaGAAACTGAACTGTCAAGAGAGATGTCAATGGCAGCTGATGAAA | + |
|
Preference number: 5 (lower is better) Translates to: HFHFPSGHMYILQLC*KLNCQERCQWQLMK Trigger: TTTCATCAGCTGCCATTGACATCTCTCTTGACAGTTCAGTTTGCAACATAATTGGAGAATATACATGTGTCCGGAGGGAAAATGAAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009772.8 ENSMUST00000124496.8 |
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| CDS TCA 90 bp | ATTTACAGATGCAGTATGTGGCACCAAGTCAATATACGTGGAAACTaGATACTTAGAGTTATTCAGAAGCCTTTTAACGCCTGTAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: IYRCSMWHQVNIRGN*ILRVIQKPFNACKF Trigger: GAACTTACAGGCGTTAAAAGGCTTCTGAATAACTCTAAGTATTCAGTTTCCACGTATATTGACTTGGTGCCACATACTGCATCTGTAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009772.8 |
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| CDS GCA 90 bp | TCTGAAAATGCATTTGATAAAGAACTGGGGAAGGAAGAACTGTGTTaGTCTTTAAATTGTTCTGTAACAGCAATGCTACTGGATGCTATA | + |
|
Preference number: 5 (lower is better) Translates to: SENAFDKELGKEELC*SLNCSVTAMLLDAI Trigger: TATAGCATCCAGTAGCATTGCTGTTACAGAACAATTTAAAGAGCAACACAGTTCTTCCTTCCCCAGTTCTTTATCAAATGCATTTTCAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009772.8 ENSMUST00000124496.8 |
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| CDS TCA 90 bp | TTACCAGTGGGTATGAAAGAAAAACCTGAATTGTGTGTGTATACTTaGGAAGCATCTCTAAGATTTGATGAATTTTCTGTCTGTCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LPVGMKEKPELCVYT*EASLRFDEFSVCLL Trigger: CAACAGACAGACAGAAAATTCATCAAATCTTAGAGATGCTTCTCAAGTATACACACACAATTCAGGTTTTTCTTTCATACCCACTGGTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000009772.8 ENSMUST00000124496.8 |
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| CDS CAA 72 bp | CTCTGTACCTGGAGGTGTCTGCTCAGAAACCCCAGGTaGACTGCTGTCCTCCCCAGGTTCTGTAACGGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: LCTWRCLLRNPR*TAVLPRFCNGC Trigger: ACACCCGTTACAGAACCTGGGGAGGACAGCAGTCAACCTGGGGTTTCTGAGCAGACACCTCCAGGTACAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009772.8 ENSMUST00000124501.2 |
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| CDS CAA 90 bp | TACTGTGCACTCTGTACCTGGAGGTGTCTGCTCAGAAACCCCAGGTaGACTGCTGTCCTCCCCAGGTTCTGTAACGGGTGTCTCCATCTT | + |
|
Preference number: 6 (lower is better) Translates to: YCALCTWRCLLRNPR*TAVLPRFCNGCLHL Trigger: AAGATGGAGACACCCGTTACAGAACCTGGGGAGGACAGCAGTCAACCTGGGGTTTCTGAGCAGACACCTCCAGGTACAGAGTGCACAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009772.8 ENSMUST00000124501.2 |
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| CDS TCA 72 bp | CATTTCGAACCAGTTTTGTTTCCCCAAACTGCCATGTaGACTGCAGGTCACAGCTCATATCCAGCCTGCACT | + |
|
Preference number: 6 (lower is better) Translates to: HFEPVLFPQTAM*TAGHSSYPACT Trigger: AGTGCAGGCTGGATATGAGCTGTGACCTGCAGTTCACATGGCAGTTTGGGGAAACAAAACTGGTTCGAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000124496.8 ENSMUST00000124501.2 ENSMUST00000149399.8 |
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| CDS GCA 72 bp | GGTAGAAATTGGACTGCAGTTGATATCCACGTGGCCTaGGAAGCAGTTCACTGTACAAGCTCTCATCATACC | + |
|
Preference number: 6 (lower is better) Translates to: GRNWTAVDIHVA*EAVHCTSSHHT Trigger: GGTATGATGAGAGCTTGTACAGTGAACTGCTTCGCAGGCCACGTGGATATCAACTGCAGTCCAATTTCTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009772.8 |
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| CDS GCA 72 bp | CTTTGGAATGGTGAATTTCTTCCCAGCACTGGCTTCTaGGTCCATATTCCACAGAGATTCACTGTCTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LWNGEFLPSTGF*VHIPQRFTVWA Trigger: AGCCCAGACAGTGAATCTCTGTGGAATATGGACGCAGAAGCCAGTGCTGGGAAGAAATTCACCATTCCAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124496.8 ENSMUST00000124501.2 ENSMUST00000149399.8 |
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| CDS CCA 72 bp | TGGGTGTCACCAACAGAAAGGGAAACCACTTCTTCTTaGCAGCCAATTAGCTCAGGAAGAAGAGACCAATCG | + |
|
Preference number: 6 (lower is better) Translates to: WVSPTERETTSS*QPISSGRRDQS Trigger: CGATTGGTCTCTTCTTCCTGAGCTAATTGGCTGCCAAGAAGAAGTGGTTTCCCTTTCTGTTGGTGACACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009772.8 |
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| CDS CAA 90 bp | AAGGACAGAAATTGCAGTCTCTACCAGTTTCCAAAGGCAATGTGTTaGGGTGTCACCAACAGAAAGGGAAACCACTTCTTCTTGGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: KDRNCSLYQFPKAMC*GVTNRKGNHFFLAA Trigger: GGCTGCCAAGAAGAAGTGGTTTCCCTTTCTGTTGGTGACACCCAAACACATTGCCTTTGGAAACTGGTAGAGACTGCAATTTCTGTCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009772.8 |
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| CDS CAA 90 bp | CTCCCCAGGTTCTGTAACGGGTGTCTCCATCTTTTCTTGTCTGTTTaGTTGCAAAGCATTCCAAGCCTCTTAGGAAATCCTGTTGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LPRFCNGCLHLFLSV*LQSIPSLLGNPVEE Trigger: CTCCTCAACAGGATTTCCTAAGAGGCTTGGAATGCTTTGCAACAAAACAGACAAGAAAAGATGGAGACACCCGTTACAGAACCTGGGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| CDS GCA 72 bp | GTGACTCACTGCTCAGAGCTGTTAAAACTGGGACATTaGTTCTCATTTGAGCTCTCTGGACCTGTTCTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: VTHCSELLKLGH*FSFELSGPVLH Trigger: GTGAAGAACAGGTCCAGAGAGCTCAAATGAGAAGCAATGTCCCAGTTTTAACAGCTCTGAGCAGTGAGTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009772.8 ENSMUST00000124496.8 |
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| CDS TCA 72 bp | GATGAGCCATGGCTTGTTGGCCTTCTCTTCTTCTCGTaGGTTTCATGCTCCCTTAAGTCTTTATTGGCTATG | + |
|
Preference number: 6 (lower is better) Translates to: DEPWLVGLLFFS*VSCSLKSLLAM Trigger: CATAGCCAATAAAGACTTAAGGGAGCATGAAACTCACGAGAAGAAGAGAAGGCCAACAAGCCATGGCTCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009772.8 |
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| CDS CCA 72 bp | TGTATTTTAGTCGTCCTTGAAAACCAGGGTAGAAATTaGACTGCAGTTGATATCCACGTGGCCTGCGAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: CILVVLENQGRN*TAVDIHVACEA Trigger: TGCTTCGCAGGCCACGTGGATATCAACTGCAGTCCAATTTCTACCCTGGTTTTCAAGGACGACTAAAATACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009772.8 |
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| CDS CAA 90 bp | CCCAGGTTCTGTAACGGGTGTCTCCATCTTTTCTTGTCTGTTTTGTaGCAAAGCATTCCAAGCCTCTTAGGAAATCCTGTTGAGGAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: PRFCNGCLHLFLSVL*QSIPSLLGNPVEEN Trigger: ATTCTCCTCAACAGGATTTCCTAAGAGGCTTGGAATGCTTTGCAACAAAACAGACAAGAAAAGATGGAGACACCCGTTACAGAACCTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| CDS TCA 72 bp | GTTTCATGCTCCCTTAAGTCTTTATTGGCTATGTTCTaGCCCCTGGAAGAAGATGCATGCAGGGTTCTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: VSCSLKSLLAMF*PLEEDACRVLL Trigger: CAAAAGAACCCTGCATGCATCTTCTTCCAGGGGTCAGAACATAGCCAATAAAGACTTAAGGGAGCATGAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009772.8 |
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| CDS TCA 72 bp | AGGCCCTGTAACTCCTCTAGGTCTGCAGATTTAGCTTaGTCCAGTATCTCACCAACACAAGAAATATCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: RPCNSSRSADLA*SSISPTQEISG Trigger: TCCAGATATTTCTTGTGTTGGTGAGATACTGGATCAAGCTAAATCTGCAGACCTAGAGGAGTTACAGGGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009772.8 |
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| CDS GCA 72 bp | TGCTACTGGATGCTATACAGTCATGGCCCTTTGAGCTaGTATTATGAGCCTGATAGTGTGAACTTTCAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: CYWMLYSHGPLS*YYEPDSVNFQK Trigger: CTTCTGAAAGTTCACACTATCAGGCTCATAATAGCAGCTCAAAGGGCCATGACTGTATAGCATCCAGTAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009772.8 ENSMUST00000124496.8 |
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| CDS GCA 72 bp | ATGGTGACTCTTGAGAGAAATGACCCTGAGAGTCGTTaGTACAAGTATTTTCTGATTCATCGGAGTTCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: MVTLERNDPESR*YKYFLIHRSSV Trigger: CACGGAACTCCGATGAATCAGAAAATACTTGTAGCAACGACTCTCAGGGTCATTTCTCTCAAGAGTCACCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009772.8 ENSMUST00000124496.8 |
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| CDS GCA 72 bp | TCTCTCACATGGAAAGTGGTAAGACTACTGGAAACATaGCCAGACATGACTTCATTAGAAAGGCACTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: SLTWKVVRLLET*PDMTSLERHSA Trigger: TGCAGAGTGCCTTTCTAATGAAGTCATGTCTGGGCATGTTTCCAGTAGTCTTACCACTTTCCATGTGAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009772.8 |
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| CDS CCA 72 bp | TCTGTGCTGATGGAGGCTCTCATCATTCCCGTATCTTaGATGTATTCACATAGATTTCCTTTCTTCTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: SVLMEALIIPVS*MYSHRFPFFWA Trigger: AGCCCAGAAGAAAGGAAATCTATGTGAATACATCCAAGATACGGGAATGATGAGAGCCTCCATCAGCACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009772.8 ENSMUST00000124496.8 |
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| CDS CCA 72 bp | TCTTCTCGTGAGTTTCATGCTCCCTTAAGTCTTTATTaGCTATGTTCTGACCCCTGGAAGAAGATGCATGCA | + |
|
Preference number: 6 (lower is better) Translates to: SSREFHAPLSLY*LCSDPWKKMHA Trigger: TGCATGCATCTTCTTCCAGGGGTCAGAACATAGCCAATAAAGACTTAAGGGAGCATGAAACTCACGAGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009772.8 |
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| CDS TCA 72 bp | CTCAGAGCTGTTAAAACTGGGACATTGCTTCTCATTTaGGCTCTCTGGACCTGTTCTTCACTGTGTTTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: LRAVKTGTLLLI*ALWTCSSLCFC Trigger: ACAAAAACACAGTGAAGAACAGGTCCAGAGAGCTCAAATGAGAAGCAATGTCCCAGTTTTAACAGCTCTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000009772.8 ENSMUST00000124496.8 |
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| CDS TCA 72 bp | GTTTCTACAATGGCTGGCTTGGAGAGACAGTCAGAGTaGGAGTTGTTATTAACTTTAATTTGCCCTGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: VSTMAGLERQSE*ELLLTLICPAS Trigger: GGAAGCAGGGCAAATTAAAGTTAATAACAACTCTCACTCTGACTGTCTCTCCAAGCCAGCCATTGTAGAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009772.8 |
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| CDS GCA 72 bp | AAGTATTTTCTGATTCATCGGAGTTCCGTGACTCACTaGTCAGAGCTGTTAAAACTGGGACATTGCTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: KYFLIHRSSVTH*SELLKLGHCFS Trigger: TGAGAAGCAATGTCCCAGTTTTAACAGCTCTGAGCAGTGAGTCACGGAACTCCGATGAATCAGAAAATACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009772.8 ENSMUST00000124496.8 |
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| CDS CCA 72 bp | TTTGCACATGAAAAACTTGAATTTTCTCCAGAAGGTTaGGAGCACATGCCAAATCCAGAAGCATTCCCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: FAHEKLEFSPEG*EHMPNPEAFPS Trigger: GGAAGGGAATGCTTCTGGATTTGGCATGTGCTCCCAACCTTCTGGAGAAAATTCAAGTTTTTCATGTGCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000009772.8 ENSMUST00000124496.8 |
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| CDS CCA 72 bp | GGCTTCTGCGTCCATATTCCACAGAGATTCACTGTCTaGGCTCTTGTACTTATCATTATCGTTCATTTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: GFCVHIPQRFTV*ALVLIIIVHFH Trigger: ATGGAAATGAACGATAATGATAAGTACAAGAGCCCAGACAGTGAATCTCTGTGGAATATGGACGCAGAAGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124496.8 ENSMUST00000124501.2 ENSMUST00000149399.8 |
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| CDS TCA 72 bp | ATCTTCATGCTCCAAAGAGTGTTGCGGGTACTTTTGTaGAAGACACTCTATAGTTGGAGTAAGAGAACACTC | + |
|
Preference number: 6 (lower is better) Translates to: IFMLQRVLRVLL*KTLYSWSKRTL Trigger: GAGTGTTCTCTTACTCCAACTATAGAGTGTCTTTCACAAAAGTACCCGCAACACTCTTTGGAGCATGAAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009772.8 ENSMUST00000124496.8 |
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| CDS TCA 72 bp | TTTTCCAGATCCTTGATCCACATGTGTATTATGACTTaGGTTGGAAGAATGGGAACTCTCAGACTTGCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: FSRSLIHMCIMT*VGRMGTLRLAH Trigger: GTGAGCAAGTCTGAGAGTTCCCATTCTTCCAACTCAAGTCATAATACACATGTGGATCAAGGATCTGGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009772.8 ENSMUST00000124496.8 |
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| CDS GCA 72 bp | TTTCCCTCCGGACACATGTATATTCTCCAATTATGTTaGAAACTGAACTGTCAAGAGAGATGTCAATGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: FPSGHMYILQLC*KLNCQERCQWQ Trigger: CTGCCATTGACATCTCTCTTGACAGTTCAGTTTGCAACATAATTGGAGAATATACATGTGTCCGGAGGGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009772.8 ENSMUST00000124496.8 |
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| CDS GCA 72 bp | TATGACTTGAGTTGGAAGAATGGGAACTCTCAGACTTaGTCACATCTCCTGATTCTTGCACTGAATTACCAA | + |
|
Preference number: 6 (lower is better) Translates to: YDLSWKNGNSQT*SHLLILALNYQ Trigger: TTGGTAATTCAGTGCAAGAATCAGGAGATGTGAGCAAGTCTGAGAGTTCCCATTCTTCCAACTCAAGTCATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009772.8 ENSMUST00000124496.8 |
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| CDS GCA 72 bp | TCTGCAATCCTCTCTCTGTTTGTTCTATATAATCTGTaGTTTGATACCGGGGTCAATGACTCCTCAATGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SAILSLFVLYNL*FDTGVNDSSMS Trigger: TGACATTGAGGAGTCATTGACCCCGGTATCAAAGCACAGATTATATAGAACAAACAGAGAGAGGATTGCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009772.8 |
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| CDS CCA 72 bp | TCTGGAAACTGTTCTTCATCACAAAATTCTCTCACATaGAAAGTGGTAAGACTACTGGAAACATGCCCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: SGNCSSSQNSLT*KVVRLLETCPD Trigger: GTCTGGGCATGTTTCCAGTAGTCTTACCACTTTCCATGTGAGAGAATTTTGTGATGAAGAACAGTTTCCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009772.8 |
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| CDS CAA 72 bp | GCGTCCATATTCCACAGAGATTCACTGTCTGGGCTCTaGTACTTATCATTATCGTTCATTTCCATGTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: ASIFHRDSLSGL*YLSLSFISMLL Trigger: CAACAACATGGAAATGAACGATAATGATAAGTACAAGAGCCCAGACAGTGAATCTCTGTGGAATATGGACGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124496.8 ENSMUST00000124501.2 ENSMUST00000149399.8 |
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| CDS CAA 72 bp | TGTAACGGGTGTCTCCATCTTTTCTTGTCTGTTTTGTaGCAAAGCATTCCAAGCCTCTTAGGAAATCCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: CNGCLHLFLSVL*QSIPSLLGNPV Trigger: AACAGGATTTCCTAAGAGGCTTGGAATGCTTTGCAACAAAACAGACAAGAAAAGATGGAGACACCCGTTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124501.2 |
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| CDS CAA 90 bp | CTCTTATCCAATGGCAAAACATCACTCAAACCTGCAGTATCACTTTaGTTTCTCATGCTCTGTTCTCTCTTCATAAGTCTTGGGTCCTTA | + |
|
Preference number: 6 (lower is better) Translates to: LLSNGKTSLKPAVSL*FLMLCSLFISLGSL Trigger: TAAGGACCCAAGACTTATGAAGAGAGAACAGAGCATGAGAAACAAAAGTGATACTGCAGGTTTGAGTGATGTTTTGCCATTGGATAAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009772.8 ENSMUST00000124496.8 |
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| CDS CAA 90 bp | GGCACTCTGCAATCCTCTCTCTGTTTGTTCTATATAATCTGTGCTTaGATACCGGGGTCAATGACTCCTCAATGTCAAATCTTAAAAATC | + |
|
Preference number: 6 (lower is better) Translates to: GTLQSSLCLFYIICA*IPGSMTPQCQILKI Trigger: GATTTTTAAGATTTGACATTGAGGAGTCATTGACCCCGGTATCAAAGCACAGATTATATAGAACAAACAGAGAGAGGATTGCAGAGTGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009772.8 |
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| CDS TCA 72 bp | GATGGAACTAGTTGGCATACATGTCAGCTTTATTTGTaGATCACCACAACCCAAACTCTTATCCAATGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: DGTSWHTCQLYL*ITTTQTLIQWQ Trigger: TTGCCATTGGATAAGAGTTTGGGTTGTGGTGATTCACAAATAAAGCTGACATGTATGCCAACTAGTTCCATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009772.8 ENSMUST00000124496.8 |
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| CDS TCA 72 bp | ACAACTAGTAATGGTATTATCAGCAGGAACTTCCGATaGAGAGATGGAACTAGTTGGCATACATGTCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: TTSNGIISRNFR*RDGTSWHTCQL Trigger: AAGCTGACATGTATGCCAACTAGTTCCATCTCTTCATCGGAAGTTCCTGCTGATAATACCATTACTAGTTGT 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009772.8 ENSMUST00000124496.8 |
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| CDS TCA 72 bp | CCTTTCTTCTGGGCTGGGAAGACTGTAGACATCTGGTaGCCAACCTTATATATACTGTTTATATCAGAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: PFFWAGKTVDIW*PTLYILFISED Trigger: ATCTTCTGATATAAACAGTATATATAAGGTTGGTCACCAGATGTCTACAGTCTTCCCAGCCCAGAAGAAAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009772.8 ENSMUST00000124496.8 |
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| CDS TCA 72 bp | TGCAGTATGTGGCACCAAGTCAATATACGTGGAAACTaGATACTTAGAGTTATTCAGAAGCCTTTTAACGCC | + |
|
Preference number: 6 (lower is better) Translates to: CSMWHQVNIRGN*ILRVIQKPFNA Trigger: GGCGTTAAAAGGCTTCTGAATAACTCTAAGTATTCAGTTTCCACGTATATTGACTTGGTGCCACATACTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009772.8 |
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| CDS GCA 72 bp | ATAGATAACAGCCAGCTCTTTCTTAAGGACAGAAATTaGAGTCTCTACCAGTTTCCAAAGGCAATGTGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: IDNSQLFLKDRN*SLYQFPKAMCL Trigger: CAAACACATTGCCTTTGGAAACTGGTAGAGACTGCAATTTCTGTCCTTAAGAAAGAGCTGGCTGTTATCTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009772.8 |
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| CDS CCA 72 bp | CCAATGCTGCACGATATAGTTCATTTTTATCCCCTGTaGAAGATATGGGAAACTTGGGCACTTGTAACTTAT | + |
|
Preference number: 6 (lower is better) Translates to: PMLHDIVHFYPL*KIWETWALVTY Trigger: ATAAGTTACAAGTGCCCAAGTTTCCCATATCTTCCACAGGGGATAAAAATGAACTATATCGTGCAGCATTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000009772.8 ENSMUST00000124496.8 |
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| CDS CAA 90 bp | AGTATCTCACCAACACAAGAAATATCTGGATATGAAAGCCAAGCTTaGTTCAGCCTACAGTTTGATATGCTACCTAGAGTGGATTGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: SISPTQEISGYESQA*FSLQFDMLPRVDCL Trigger: CAAACAATCCACTCTAGGTAGCATATCAAACTGTAGGCTGAACAAAGCTTGGCTTTCATATCCAGATATTTCTTGTGTTGGTGAGATACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009772.8 |
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| CDS TCA 72 bp | ACTTGCTGTGTTACCAGTGGGTATGAAAGAAAAACCTaGATTGTGTGTGTATACTTGAGAAGCATCTCTAAG | + |
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Preference number: 6 (lower is better) Translates to: TCCVTSGYERKT*IVCVYLRSISK Trigger: CTTAGAGATGCTTCTCAAGTATACACACACAATTCAGGTTTTTCTTTCATACCCACTGGTAACACAGCAAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009772.8 ENSMUST00000124496.8 |
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| CDS TCA 72 bp | ACCAACCTTATATATACTGTTTATATCAGAAGATGGTaGCTCTTGAGAGAAATGACCCTGAGAGTCGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: TNLIYTVYIRRW*LLREMTLRVVA Trigger: AGCAACGACTCTCAGGGTCATTTCTCTCAAGAGTCACCATCTTCTGATATAAACAGTATATATAAGGTTGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009772.8 ENSMUST00000124496.8 |
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| CDS TCA 72 bp | TGCACACCATCTTTAACACGAGAAGCTTCTTCTTTGTaGCAGTTATATGGTGATGCTTCCCCATTTTCATTT | + |
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Preference number: 6 (lower is better) Translates to: CTPSLTREASSL*QLYGDASPFSF Trigger: AAATGAAAATGGGGAAGCATCACCATATAACTGTCACAAAGAAGAAGCTTCTCGTGTTAAAGATGGTGTGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009772.8 ENSMUST00000124496.8 |
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| CDS GCA 72 bp | GCATTTGATAAAGAACTGGGGAAGGAAGAACTGTGTTaGTCTTTAAATTGTTCTGTAACAGCAATGCTACTG | + |
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Preference number: 6 (lower is better) Translates to: AFDKELGKEELC*SLNCSVTAMLL Trigger: CAGTAGCATTGCTGTTACAGAACAATTTAAAGAGCAACACAGTTCTTCCTTCCCCAGTTCTTTATCAAATGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009772.8 ENSMUST00000124496.8 |
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| CDS GCA 72 bp | AAAAACTTGAATTTTCTCCAGAAGGTTGGGAGCACATaGCAAATCCAGAAGCATTCCCTTCCTTATTTGTTT | + |
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Preference number: 6 (lower is better) Translates to: KNLNFLQKVGST*QIQKHSLPYLF Trigger: AAACAAATAAGGAAGGGAATGCTTCTGGATTTGGCATGTGCTCCCAACCTTCTGGAGAAAATTCAAGTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000009772.8 ENSMUST00000124496.8 |
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| CDS GCA 72 bp | TGGGAACTCTCAGACTTGCTCACATCTCCTGATTCTTaGACTGAATTACCAAACTTATTTGCACATGAAAAA | + |
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Preference number: 6 (lower is better) Translates to: WELSDLLTSPDS*TELPNLFAHEK Trigger: TTTTTCATGTGCAAATAAGTTTGGTAATTCAGTGCAAGAATCAGGAGATGTGAGCAAGTCTGAGAGTTCCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009772.8 ENSMUST00000124496.8 |
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| CDS CCA 72 bp | GTTTCATTACTAAGAACAGTTTCTTTGCACCAAGTATaGTTTACTCCATCTTTAGTGCTGTCTTCTGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: VSLLRTVSLHQV*FTPSLVLSSVL Trigger: CAGCACAGAAGACAGCACTAAAGATGGAGTAAACCATACTTGGTGCAAAGAAACTGTTCTTAGTAATGAAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009772.8 ENSMUST00000124496.8 |
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| CDS CAA 72 bp | GGGCTACTAACAGTTTCATTACTAAGAACAGTTTCTTaGCACCAAGTATGGTTTACTCCATCTTTAGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: GLLTVSLLRTVS*HQVWFTPSLVL Trigger: CAGCACTAAAGATGGAGTAAACCATACTTGGTGCAAAGAAACTGTTCTTAGTAATGAAACTGTTAGTAGCCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009772.8 ENSMUST00000124496.8 |
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| CDS CAA 72 bp | AACTATGCTGATCAGTACCCTCCCTTCTTGCAAAACTaGAGGATTCTATTTCCTCATAACTGCTTCCAAATA | + |
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Preference number: 6 (lower is better) Translates to: NYADQYPPFLQN*RILFPHNCFQI Trigger: TATTTGGAAGCAGTTATGAGGAAATAGAATCCTCAAGTTTTGCAAGAAGGGAGGGTACTGATCAGCATAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009772.8 ENSMUST00000124496.8 |
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| CDS CAA 90 bp | TGGCTTGGAGAGACAGTCAGAGTGAGAGTTGTTATTAACTTTAATTaGCCCTGCTTCCTTTCTTTCTTTAAGCTGATTAGGAATGTCTTT | + |
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Preference number: 6 (lower is better) Translates to: WLGETVRVRVVINFN*PCFLSFFKLIRNVF Trigger: AAAGACATTCCTAATCAGCTTAAAGAAAGAAAGGAAGCAGGGCAAATTAAAGTTAATAACAACTCTCACTCTGACTGTCTCTCCAAGCCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009772.8 |
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| CDS TCA 72 bp | CTCAGTGATGTTATAAGCTGTCCATTACCTGCCTTTTaGCCAATACATTTCACTGTTACTATTGCATATGGA | + |
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Preference number: 6 (lower is better) Translates to: LSDVISCPLPAF*PIHFTVTIAYG Trigger: TCCATATGCAATAGTAACAGTGAAATGTATTGGTCAAAAGGCAGGTAATGGACAGCTTATAACATCACTGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124496.8 ENSMUST00000124501.2 |
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| CDS CAA 72 bp | AATGGCAAAACATCACTCAAACCTGCAGTATCACTTTaGTTTCTCATGCTCTGTTCTCTCTTCATAAGTCTT | + |
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Preference number: 6 (lower is better) Translates to: NGKTSLKPAVSL*FLMLCSLFISL Trigger: AAGACTTATGAAGAGAGAACAGAGCATGAGAAACAAAAGTGATACTGCAGGTTTGAGTGATGTTTTGCCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009772.8 ENSMUST00000124496.8 |
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| CDS CAA 90 bp | TTATCAATTGGGCTACTAACAGTTTCATTACTAAGAACAGTTTCTTaGCACCAAGTATGGTTTACTCCATCTTTAGTGCTGTCTTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: LSIGLLTVSLLRTVS*HQVWFTPSLVLSSV Trigger: CACAGAAGACAGCACTAAAGATGGAGTAAACCATACTTGGTGCAAAGAAACTGTTCTTAGTAATGAAACTGTTAGTAGCCCAATTGATAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009772.8 ENSMUST00000124496.8 |
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| CDS CAA 90 bp | GTAACTTGTAGATCTGGAAGAAAAATTGGGTTGTGGAGCTCTCTTTaGTCTTGTGAACAGAAAGAAACACAGTTACATTCTGTAGAACTA | + |
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Preference number: 6 (lower is better) Translates to: VTCRSGRKIGLWSSL*SCEQKETQLHSVEL Trigger: TAGTTCTACAGAATGTAACTGTGTTTCTTTCTGTTCACAAGACAAAAGAGAGCTCCACAACCCAATTTTTCTTCCAGATCTACAAGTTAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009772.8 ENSMUST00000124496.8 |
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| CDS TCA 72 bp | AAGAAAAATTGGGTTGTGGAGCTCTCTTTTGTCTTGTaGACAGAAAGAAACACAGTTACATTCTGTAGAACT | + |
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Preference number: 6 (lower is better) Translates to: KKNWVVELSFVL*TERNTVTFCRT Trigger: AGTTCTACAGAATGTAACTGTGTTTCTTTCTGTTCACAAGACAAAAGAGAGCTCCACAACCCAATTTTTCTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000009772.8 ENSMUST00000124496.8 |
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| CDS GCA 72 bp | AGAATATTCAGTACATTCCTAATGTGCTTCTCTGACTaGGAAAATGTTTTAATTCGTCCTTGGGATAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: RIFSTFLMCFSD*ENVLIRPWDKE Trigger: TTCCTTATCCCAAGGACGAATTAAAACATTTTCGCAGTCAGAGAAGCACATTAGGAATGTACTGAATATTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009772.8 |
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| CDS CCA 72 bp | ATTGTAACTTGTAGATCTGGAAGAAAAATTGGGTTGTaGAGCTCTCTTTTGTCTTGTGAACAGAAAGAAACA | + |
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Preference number: 6 (lower is better) Translates to: IVTCRSGRKIGL*SSLLSCEQKET Trigger: TGTTTCTTTCTGTTCACAAGACAAAAGAGAGCTCCACAACCCAATTTTTCTTCCAGATCTACAAGTTACAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000009772.8 ENSMUST00000124496.8 |
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| CDS TCA 72 bp | ACTTTAATTTGCCCTGCTTCCTTTCTTTCTTTAAGCTaGTTAGGAATGTCTTTCAAAGCAATTGTGTCTACA | + |
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Preference number: 6 (lower is better) Translates to: TLICPASFLSLS*LGMSFKAIVST Trigger: TGTAGACACAATTGCTTTGAAAGACATTCCTAATCAGCTTAAAGAAAGAAAGGAAGCAGGGCAAATTAAAGT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009772.8 |
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| CDS CAA 72 bp | TCGGTGTTACTCTTAATTTCCCTCATTTCAACTATATaGGTGAAATGGTCATTTGCAAGACAATCTTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: SVLLLISLISTI*VKWSFARQSCF Trigger: GAAACAAGATTGTCTTGCAAATGACCATTTCACCAATATAGTTGAAATGAGGGAAATTAAGAGTAACACCGA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009772.8 ENSMUST00000124496.8 |
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| CDS CAA 72 bp | TTCACAAAGGTCATTTCCCTGGCTATGCATATTTTGTaGAAATACAGAAGCATTATCATGTTCAAGATCTAC | + |
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Preference number: 6 (lower is better) Translates to: FTKVISLAMHIL*KYRSIIMFKIY Trigger: GTAGATCTTGAACATGATAATGCTTCTGTATTTCAACAAAATATGCATAGCCAGGGAAATGACCTTTGTGAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009772.8 ENSMUST00000124496.8 |
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