Pregenerated sensors for TEX13C3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068149Ensembl transcript IDs: ENSMUST00000089246.6
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | CAGCACCTAGCTGAGATTTTACTGAGGCGGAGACTGGTTTTGAAAGTCATTTCAGGGCACACTGCACACTaGCCATTCTGCAAGCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: QHLAEILLRRRLVLKVISGHTAH*PFCKPV Trigger: CACAGGCTTGCAGAATGGGCAGTGTGCAGTGTGCCC...TGAAATGACTTTCAAAACCAGTCTCCGCCTCAGTAAAATCTCAGCTAGGTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089246.6 |
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| CDS-3UTR CCA 90 bp | CAGCACCTAGCTGAGATTTTACTGAGGCGGAGACTGGTTTTGAAAGTCATTTCAGCCGTTGCAAGTCTGTaGCCAAAGTCCAGGTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: QHLAEILLRRRLVLKVISAVASL*PKSRWL Trigger: CAGCCACCTGGACTTTGGCCACAGACTTGCAACGGC...TGAAATGACTTTCAAAACCAGTCTCCGCCTCAGTAAAATCTCAGCTAGGTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089246.6 |
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| CDS-3UTR GCA 90 bp | CTAGCTGAGATTTTACTGAGGCGGAGACTGGTTTTGAAAGTCATTTCACGAAGAGCACACTGCCCATTCTaGAAGCCTGTGTCCAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: LAEILLRRRLVLKVISRRAHCPF*KPVSRA Trigger: GGCTCTGGACACAGGCTTGCAGAATGGGCAGTGTGC...TCTTCGTGAAATGACTTTCAAAACCAGTCTCCGCCTCAGTAAAATCTCAGCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089246.6 |
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| CDS-3UTR GCA 90 bp | CTAGCTGAGATTTTACTGAGGCGGAGACTGGTTTTGAAAGTCATTTCACGAAGATCCTCACGCAGCCGTTaGAAGTCTGTGGCCAAAGTC | + |
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Preference number: 4 (lower is better) Translates to: LAEILLRRRLVLKVISRRSSRSR*KSVAKV Trigger: GACTTTGGCCACAGACTTGCAACGGCTGCGTGAGGA...TCTTCGTGAAATGACTTTCAAAACCAGTCTCCGCCTCAGTAAAATCTCAGCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089246.6 |
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| CDS-3UTR TCA 90 bp | CAGCACCTAGCTGAGATTTTACTGAGGCGGAGACTGGTTTTGAAAGTCATTTCAATCTTTCCAGGGCCGTaGATGGAAGGTCAGGTAGAA | + |
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Preference number: 4 (lower is better) Translates to: QHLAEILLRRRLVLKVISIFPGP*MEGQVE Trigger: TTCTACCTGACCTTCCATTCACGGCCCTGGAAAGAT...TGAAATGACTTTCAAAACCAGTCTCCGCCTCAGTAAAATCTCAGCTAGGTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089246.6 |
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| CDS-3UTR GCA 90 bp | CAGCACCTAGCTGAGATTTTACTGAGGCGGAGACTGGTTTTGAAAGTCATTTCATTTCTTCGGGCACACTaGACACTGCCCATTCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: QHLAEILLRRRLVLKVISFLRAH*TLPILQ Trigger: TTGCAGAATGGGCAGTGTGCAGTGTGCCCGAAGAAA...TGAAATGACTTTCAAAACCAGTCTCCGCCTCAGTAAAATCTCAGCTAGGTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089246.6 |
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| CDS-3UTR CCA 90 bp | CTAGCTGAGATTTTACTGAGGCGGAGACTGGTTTTGAAAGTCATTTCACGAAGATGGCCAAAGTCCAGGTaGCTGCCTCATGCTCTTCTA | + |
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Preference number: 4 (lower is better) Translates to: LAEILLRRRLVLKVISRRWPKSR*LPHALL Trigger: TAGAAGAGCATGAGGCAGCCACCTGGACTTTGGCCA...TCTTCGTGAAATGACTTTCAAAACCAGTCTCCGCCTCAGTAAAATCTCAGCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089246.6 |
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| CDS-3UTR CCA 90 bp | CTAGCTGAGATTTTACTGAGGCGGAGACTGGTTTTGAAAGTCATTTCACGAAGATCACACACTGGAAGCTaGGAATTCTTCAGCCCCGCA | + |
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Preference number: 4 (lower is better) Translates to: LAEILLRRRLVLKVISRRSHTGS*EFFSPA Trigger: TGCGGGGCTGAAGAATTCCCAGCTTCCAGTGTGTGA...TCTTCGTGAAATGACTTTCAAAACCAGTCTCCGCCTCAGTAAAATCTCAGCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089246.6 |
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| CDS-3UTR TCA 90 bp | CAGCACCTAGCTGAGATTTTACTGAGGCGGAGACTGGTTTTGAAAGTCATTTCATGCTCTTTAACATTGTaGAGCTCAGAGACCACTTCA | + |
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Preference number: 4 (lower is better) Translates to: QHLAEILLRRRLVLKVISCSLTL*SSETTS Trigger: TGAAGTGGTCTCTGAGCTTCACAATGTTAAAGAGCA...TGAAATGACTTTCAAAACCAGTCTCCGCCTCAGTAAAATCTCAGCTAGGTGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089246.6 |
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| CDS-3UTR GCA 90 bp | CAGCACCTAGCTGAGATTTTACTGAGGCGGAGACTGGTTTTGAAAGTCATTTCATCAATGATCTTCCTTTaGAACATATCCCGCTCAAAC | + |
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Preference number: 4 (lower is better) Translates to: QHLAEILLRRRLVLKVISSMIFL*NISRSN Trigger: GTTTGAGCGGGATATGTTGCAAAGGAAGATCATTGA...TGAAATGACTTTCAAAACCAGTCTCCGCCTCAGTAAAATCTCAGCTAGGTGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089246.6 |
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| CDS-3UTR TCA 90 bp | CTAGCTGAGATTTTACTGAGGCGGAGACTGGTTTTGAAAGTCATTTCACGAAGAACAGCTCAAACTCAATaGTCTTCCTTTGCAACATAT | + |
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Preference number: 4 (lower is better) Translates to: LAEILLRRRLVLKVISRRTAQTQ*SSFATY Trigger: ATATGTTGCAAAGGAAGATCATTGAGTTTGAGCTGT...TCTTCGTGAAATGACTTTCAAAACCAGTCTCCGCCTCAGTAAAATCTCAGCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089246.6 |
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| CDS GCA 90 bp | ACTGTTAGGGATGCCATCTGGTCTTTCTTCGGGCACACTGCACACTaGCCATTCTGCAAGCCTGTGTCCAGAGCCTCTCCATTTTCTTTC | + |
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Preference number: 5 (lower is better) Translates to: TVRDAIWSFFGHTAH*PFCKPVSRASPFSF Trigger: GAAAGAAAATGGAGAGGCTCTGGACACAGGCTTGCAGAATGGGCAGTGTGCAGTGTGCCCGAAGAAAGACCAGATGGCATCCCTAACAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089246.6 |
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| CDS GCA 90 bp | GATGCCATCTGGTCTTTCTTCGGGCACACTGCACACTGCCCATTCTaGAAGCCTGTGTCCAGAGCCTCTCCATTTTCTTTCACAATTAGA | + |
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Preference number: 5 (lower is better) Translates to: DAIWSFFGHTAHCPF*KPVSRASPFSFTIR Trigger: TCTAATTGTGAAAGAAAATGGAGAGGCTCTGGACACAGGCTTGCAGAATGGGCAGTGTGCAGTGTGCCCGAAGAAAGACCAGATGGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089246.6 |
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| CDS TCA 90 bp | ATATCCCGCTCAAACTTCACTTGCTTCAGGTGCTCTTTAACATTGTaGAGCTCAGAGACCACTTCATCACGTTCCTCACGCAGCCGTTGC | + |
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Preference number: 5 (lower is better) Translates to: ISRSNFTCFRCSLTL*SSETTSSRSSRSRC Trigger: GCAACGGCTGCGTGAGGAACGTGATGAAGTGGTCTCTGAGCTTCACAATGTTAAAGAGCACCTGAAGCAAGTGAAGTTTGAGCGGGATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089246.6 |
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| CDS-3UTR CAA 90 bp | CTAGCTGAGATTTTACTGAGGCGGAGACTGGTTTTGAAAGTCATTTCACGAAGAGATGGAACGTGGTACTaGGGTATCAACCACTACAGA | + |
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Preference number: 5 (lower is better) Translates to: LAEILLRRRLVLKVISRRDGTWY*GINHYR Trigger: TCTGTAGTGGTTGATACCCAAGTACCACGTTCCATC...TCTTCGTGAAATGACTTTCAAAACCAGTCTCCGCCTCAGTAAAATCTCAGCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089246.6 |
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| CDS-3UTR CAA 90 bp | CTAGCTGAGATTTTACTGAGGCGGAGACTGGTTTTGAAAGTCATTTCACGAAGACCGCTCAAACTTCACTaGCTTCAGGTGCTCTTTAAC | + |
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Preference number: 5 (lower is better) Translates to: LAEILLRRRLVLKVISRRPLKLH*LQVLFN Trigger: GTTAAAGAGCACCTGAAGCAAGTGAAGTTTGAGCGG...TCTTCGTGAAATGACTTTCAAAACCAGTCTCCGCCTCAGTAAAATCTCAGCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089246.6 |
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| CDS-3UTR CAA 90 bp | CTAGCTGAGATTTTACTGAGGCGGAGACTGGTTTTGAAAGTCATTTCACGAAGATCACAATTAGAGGCCTaGGTGGAGTGCCTGGATAAT | + |
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Preference number: 5 (lower is better) Translates to: LAEILLRRRLVLKVISRRSQLEA*VECLDN Trigger: ATTATCCAGGCACTCCACCAAGGCCTCTAATTGTGA...TCTTCGTGAAATGACTTTCAAAACCAGTCTCCGCCTCAGTAAAATCTCAGCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089246.6 |
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| CDS-3UTR CAA 90 bp | CTAGCTGAGATTTTACTGAGGCGGAGACTGGTTTTGAAAGTCATTTCACGAAGATGTGTCACCTCTTCATaGATGAACAGAACCACTTCG | + |
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Preference number: 5 (lower is better) Translates to: LAEILLRRRLVLKVISRRCVTSS*MNRTTS Trigger: CGAAGTGGTTCTGTTCATCAATGAAGAGGTGACACA...TCTTCGTGAAATGACTTTCAAAACCAGTCTCCGCCTCAGTAAAATCTCAGCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089246.6 |
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| CDS GCA 72 bp | TCAGAGACCACTTCATCACGTTCCTCACGCAGCCGTTaGAAGTCTGTGGCCAAAGTCCAGGTGGCTGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: SETTSSRSSRSR*KSVAKVQVAAS Trigger: TGAGGCAGCCACCTGGACTTTGGCCACAGACTTGCAACGGCTGCGTGAGGAACGTGATGAAGTGGTCTCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089246.6 |
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| CDS GCA 72 bp | GATGCCATCTGGTCTTTCTTCGGGCACACTGCACACTaGCCATTCTGCAAGCCTGTGTCCAGAGCCTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: DAIWSFFGHTAH*PFCKPVSRASP Trigger: TGGAGAGGCTCTGGACACAGGCTTGCAGAATGGGCAGTGTGCAGTGTGCCCGAAGAAAGACCAGATGGCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089246.6 |
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| CDS CCA 72 bp | CTTCATCACGTTCCTCACGCAGCCGTTGCAAGTCTGTaGCCAAAGTCCAGGTGGCTGCCTCATGCTCTTCTA | + |
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Preference number: 6 (lower is better) Translates to: LHHVPHAAVASL*PKSRWLPHALL Trigger: TAGAAGAGCATGAGGCAGCCACCTGGACTTTGGCCACAGACTTGCAACGGCTGCGTGAGGAACGTGATGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089246.6 |
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| CDS CCA 72 bp | CTCCAGGCACAGGCCCTCTTGATGGAACGTGGTACTTaGGTATCAACCACTACAGACTTCAGGCCATCTTCT | + |
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Preference number: 6 (lower is better) Translates to: LQAQALLMERGT*VSTTTDFRPSS Trigger: AGAAGATGGCCTGAAGTCTGTAGTGGTTGATACCCAAGTACCACGTTCCATCAAGAGGGCCTGTGCCTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089246.6 |
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| CDS CAA 72 bp | ACTCCAGGCACAGGCCCTCTTGATGGAACGTGGTACTaGGGTATCAACCACTACAGACTTCAGGCCATCTTC | + |
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Preference number: 6 (lower is better) Translates to: TPGTGPLDGTWY*GINHYRLQAIF Trigger: GAAGATGGCCTGAAGTCTGTAGTGGTTGATACCCAAGTACCACGTTCCATCAAGAGGGCCTGTGCCTGGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089246.6 |
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| CDS CAA 90 bp | AGCCTGTGTCCAGAGCCTCTCCATTTTCTTTCACAATTAGAGGCCTaGGTGGAGTGCCTGGATAATCAGCATCTGGTGACTGGGCAAGGA | + |
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Preference number: 6 (lower is better) Translates to: SLCPEPLHFLSQLEA*VECLDNQHLVTGQG Trigger: TCCTTGCCCAGTCACCAGATGCTGATTATCCAGGCACTCCACCAAGGCCTCTAATTGTGAAAGAAAATGGAGAGGCTCTGGACACAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089246.6 |
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| CDS TCA 72 bp | GCTGCCTCATGCTCTTCTACCTGGTCGTGCAGCTGCTaGACACGTTGTAACTGTTTTTCTCTCTGTCTCATA | + |
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Preference number: 6 (lower is better) Translates to: AASCSSTWSCSC*TRCNCFSLCLI Trigger: TATGAGACAGAGAGAAAAACAGTTACAACGTGTTCAGCAGCTGCACGACCAGGTAGAAGAGCATGAGGCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089246.6 |
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| CDS CAA 72 bp | CCAGAGCCTCTCCATTTTCTTTCACAATTAGAGGCCTaGGTGGAGTGCCTGGATAATCAGCATCTGGTGACT | + |
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Preference number: 6 (lower is better) Translates to: PEPLHFLSQLEA*VECLDNQHLVT Trigger: AGTCACCAGATGCTGATTATCCAGGCACTCCACCAAGGCCTCTAATTGTGAAAGAAAATGGAGAGGCTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089246.6 |
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| CDS TCA 72 bp | ACTGGGCAAGGAGTTGCTGTGACAGCTCAAACTCAATaGTCTTCCTTTGCAACATATCCCGCTCAAACTTCA | + |
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Preference number: 6 (lower is better) Translates to: TGQGVAVTAQTQ*SSFATYPAQTS Trigger: TGAAGTTTGAGCGGGATATGTTGCAAAGGAAGATCATTGAGTTTGAGCTGTCACAGCAACTCCTTGCCCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089246.6 |
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| CDS CAA 72 bp | GATCTTCCTTTGCAACATATCCCGCTCAAACTTCACTaGCTTCAGGTGCTCTTTAACATTGTGAAGCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: DLPLQHIPLKLH*LQVLFNIVKLR Trigger: TCTGAGCTTCACAATGTTAAAGAGCACCTGAAGCAAGTGAAGTTTGAGCGGGATATGTTGCAAAGGAAGATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089246.6 |
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