Pregenerated sensors for TEX13A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071686Ensembl transcript IDs: ENSMUST00000096314.3
Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AGTTCTCCTTTGTGCTTGACCATTGTGTCCTTATCCCTCCTCTTCTaGCAACAGCGGGAGGAATGGCCACAGCTGGTCTTACTGCATTCG | + |
|
Preference number: 5 (lower is better) Translates to: SSPLCLTIVSLSLLF*QQREEWPQLVLLHS Trigger: CGAATGCAGTAAGACCAGCTGTGGCCATTCCTCCCGCTGTTGTCAGAAGAGGAGGGATAAGGACACAATGGTCAAGCACAAAGGAGAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096314.3 |
||
| CDS CCA 90 bp | TCTTCAGTCTCAGTAGGTCTCTCTCTCTCTGCACTTCTTCTAGTTTaGCCTGAGCCATTTGAAGCTGGAGAGCTACCTCCTTCTGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SSVSVGLSLSALLLV*PEPFEAGELPPSEP Trigger: TGGCTCAGAAGGAGGTAGCTCTCCAGCTTCAAATGGCTCAGGCCAAACTAGAAGAAGTGCAGAGAGAGAGAGACCTACTGAGACTGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096314.3 |
||
| CDS CAA 90 bp | CTTCTGGGGAAGTTATTGTCCCTGACAGGGCAGTGTCGCTCATATTaGCCCTCTCATTCGGTCTTCCTGTGGCAGCAGCCATCCACTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LLGKLLSLTGQCRSY*PSHSVFLWQQPSTL Trigger: CAGAGTGGATGGCTGCTGCCACAGGAAGACCGAATGAGAGGGCAAATATGAGCGACACTGCCCTGTCAGGGACAATAACTTCCCCAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096314.3 |
||
| CDS CCA 72 bp | GGTCTTACTGCATTCGGGAGAGCCCTCAGCTCTGCTTaGAGGATCTTCAGTCTCAGTAGGTCTCTCTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: GLTAFGRALSSA*RIFSLSRSLSL Trigger: GAGAGAGAGAGACCTACTGAGACTGAAGATCCTCCAAGCAGAGCTGAGGGCTCTCCCGAATGCAGTAAGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096314.3 |
||
| CDS CCA 72 bp | CATGAGGCTGTCTTTCTGTGGTCGGTAGTTGGGATGTaGTGGGTATGGCTGGGAAGGGGCTTTCATAGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: HEAVFLWSVVGM*WVWLGRGFHRS Trigger: ACTCCTATGAAAGCCCCTTCCCAGCCATACCCACCACATCCCAACTACCGACCACAGAAAGACAGCCTCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096314.3 |
||
| CDS CAA 72 bp | CATTGGGATCCTCCAAGACCTCTTCTGGGGAAGTTATaGTCCCTGACAGGGCAGTGTCGCTCATATTTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: HWDPPRPLLGKL*SLTGQCRSYLP Trigger: GGGCAAATATGAGCGACACTGCCCTGTCAGGGACAATAACTTCCCCAGAAGAGGTCTTGGAGGATCCCAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096314.3 |
||
| CDS TCA 72 bp | TTGTGCTTGACCATTGTGTCCTTATCCCTCCTCTTCTaGCAACAGCGGGAGGAATGGCCACAGCTGGTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: LCLTIVSLSLLF*QQREEWPQLVL Trigger: TAAGACCAGCTGTGGCCATTCCTCCCGCTGTTGTCAGAAGAGGAGGGATAAGGACACAATGGTCAAGCACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096314.3 |
||
| CDS TCA 72 bp | GGCTCAGAGGACACAGTGGATCTCAGATTTAGGGACTaGGAGAAAGAGCACATGGATGCCTTCTTGGGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: GSEDTVDLRFRD*EKEHMDAFLGL Trigger: CAGACCCAAGAAGGCATCCATGTGCTCTTTCTCTCAGTCCCTAAATCTGAGATCCACTGTGTCCTCTGAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096314.3 |
||
| CDS TCA 72 bp | TATGGCTGGGAAGGGGCTTTCATAGGAGTATGTGAATaGGGCTGGGAGTTGGACAATAAAGGGCTCAGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: YGWEGAFIGVCE*GWELDNKGLRG Trigger: TCCTCTGAGCCCTTTATTGTCCAACTCCCAGCCTCATTCACATACTCCTATGAAAGCCCCTTCCCAGCCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096314.3 |
||
| CDS CAA 72 bp | AAATCAGGGCCTTTGTCGTGCTTGGCCATTTGTTCATaGATGAACATTGACACCTTGCTATGCCGGAACCCA | + |
|
Preference number: 6 (lower is better) Translates to: KSGPLSCLAICS*MNIDTLLCRNP Trigger: TGGGTTCCGGCATAGCAAGGTGTCAATGTTCATCAATGAACAAATGGCCAAGCACGACAAAGGCCCTGATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096314.3 |
||
| CDS GCA 72 bp | GCCATTTGTTCATTGATGAACATTGACACCTTGCTATaGCGGAACCCACTACCAAGATCCTCAGGATTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: AICSLMNIDTLL*RNPLPRSSGFK Trigger: CTTGAATCCTGAGGATCTTGGTAGTGGGTTCCGGCATAGCAAGGTGTCAATGTTCATCAATGAACAAATGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096314.3 |
||
| CDS CAA 72 bp | CACTTCATGACTCCTAGAAGCTTCATGAAACTTCCATaGGGATCCTCCAAGACCTCTTCTGGGGAAGTTATT | + |
|
Preference number: 6 (lower is better) Translates to: HFMTPRSFMKLP*GSSKTSSGEVI Trigger: AATAACTTCCCCAGAAGAGGTCTTGGAGGATCCCAATGGAAGTTTCATGAAGCTTCTAGGAGTCATGAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096314.3 |
||
| CDS TCA 72 bp | ACTGAGAGAAAGAGCACATGGATGCCTTCTTGGGTCTaGGATCTAATCTCTGCCTTTTCAGGGGATAATTTT | + |
|
Preference number: 6 (lower is better) Translates to: TERKSTWMPSWV*DLISAFSGDNF Trigger: AAAATTATCCCCTGAAAAGGCAGAGATTAGATCTCAGACCCAAGAAGGCATCCATGTGCTCTTTCTCTCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096314.3 |
||