Pregenerated sensors for TEX101 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062773Ensembl transcript IDs: ENSMUST00000078001.7, ENSMUST00000205488.2, ENSMUST00000206390.2
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GAAGGCTCCCTCCTAGGCAAAGTCCAGTGTCTAGGACCAAGGCCTCCCCTGACCAGTGAAGTGGGCATCTaGGAGGCCCCGATTTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: EGSLLGKVQCLGPRPPLTSEVGI*EAPISA Trigger: GGCAGAAATCGGGGCCTCTCAGATGCCCACTTCACT...GGTCAGGGGAGGCCTTGGTCCTAGACACTGGACTTTGCCTAGGAGGGAGCCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078001.7 |
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| CDS-3UTR CCA 90 bp | ACCCCACCCCCACTTCTTCCAGTATCAGCAGGCAGAAGGCTCCCTCCTAGGCAAGCACCCACAGTGAAGTaGGCATCTGAGAGGCCCCGA | + |
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Preference number: 4 (lower is better) Translates to: TPPPLLPVSAGRRLPPRQAPTVK*ASERPR Trigger: TCGGGGCCTCTCAGATGCCCACTTCACTGTGGGTGC...TTGCCTAGGAGGGAGCCTTCTGCCTGCTGATACTGGAAGAAGTGGGGGTGGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000078001.7 |
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| CDS-3UTR TCA 90 bp | ACCCCACCCCCACTTCTTCCAGTATCAGCAGGCAGAAGGCTCCCTCCTAGGCAAACCGCCTCTCCTCCTTaGGAAACACAGCTCTTACTG | + |
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Preference number: 4 (lower is better) Translates to: TPPPLLPVSAGRRLPPRQTASPP*ETQLLL Trigger: CAGTAAGAGCTGTGTTTCTCAAGGAGGAGAGGCGGT...TTGCCTAGGAGGGAGCCTTCTGCCTGCTGATACTGGAAGAAGTGGGGGTGGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078001.7 |
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| CDS-3UTR CCA 90 bp | TCCCTCCTAGGCAAAGTCCAGTGTCTAGGACCAAGGCCTCCCCTGACCCCCAGTAGTTACTGTAAGAGATaGCAACCAGGCCAGGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: SLLGKVQCLGPRPPLTPSSYCKR*QPGQEV Trigger: CACCTCCTGGCCTGGTTGCCATCTCTTACAGTAACT...ACTGGGGGTCAGGGGAGGCCTTGGTCCTAGACACTGGACTTTGCCTAGGAGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078001.7 |
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| CDS-3UTR CCA 90 bp | TCAGCAGGCAGAAGGCTCCCTCCTAGGCAAAGTCCAGTGTCTAGGACCAAGGCCCCACTGAGTCTATCATaGCCATCAGTCTGCAGCCGA | + |
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Preference number: 4 (lower is better) Translates to: SAGRRLPPRQSPVSRTKAPLSLS*PSVCSR Trigger: TCGGCTGCAGACTGATGGCCATGATAGACTCAGTGG...GGCCTTGGTCCTAGACACTGGACTTTGCCTAGGAGGGAGCCTTCTGCCTGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078001.7 |
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| CDS-3UTR GCA 90 bp | ACACCCCACCCCCACTTCTTCCAGTATCAGCAGGCAGAAGGCTCCCTCCTAGGCGGTCCTGGTTCCATCTaGTTTAATCAACAGGACCGT | + |
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Preference number: 4 (lower is better) Translates to: TPHPHFFQYQQAEGSLLGGPGSI*FNQQDR Trigger: ACGGTCCTGTTGATTAAAGCAGATGGAACCAGGACC...GCCTAGGAGGGAGCCTTCTGCCTGCTGATACTGGAAGAAGTGGGGGTGGGGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078001.7 |
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| CDS-3UTR GCA 90 bp | CTAGGCAAAGTCCAGTGTCTAGGACCAAGGCCTCCCCTGACCCCCAGTGTCCTCGGCTGTCTTTGTTGTTaGAGAGGGAGTCATTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: LGKVQCLGPRPPLTPSVLGCLCC*RGSHCS Trigger: ACTGCAATGACTCCCTCTGCAACAACAAAGACAGCC...GAGGACACTGGGGGTCAGGGGAGGCCTTGGTCCTAGACACTGGACTTTGCCTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078001.7 |
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| CDS-3UTR CCA 90 bp | GGCAGAAGGCTCCCTCCTAGGCAAAGTCCAGTGTCTAGGACCAAGGCCTCCCCTTTGGCAAAGTTCTCCTaGATTGCACTGCTCAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: GRRLPPRQSPVSRTKASPLAKFS*IALLSL Trigger: AAGGCTGAGCAGTGCAATCCAGGAGAACTTTGCCAA...AGGGGAGGCCTTGGTCCTAGACACTGGACTTTGCCTAGGAGGGAGCCTTCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078001.7 |
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| CDS-3UTR TCA 90 bp | TTTATTGTGTCAAATACACATGCATCCTCTTTCTCTGCTCTTCACACCCCACCCCTCCAGCACCCACAGTaGAGTGGGCATCTGAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: FIVSNTHASSFSALHTPPLQHPQ*SGHLRG Trigger: GCCTCTCAGATGCCCACTTCACTGTGGGTGCTGGAG...GGGTGGGGTGTGAAGAGCAGAGAAAGAGGATGCATGTGTATTTGACACAATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078001.7 |
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| CDS-3UTR CCA 90 bp | TTTATTGTGTCAAATACACATGCATCCTCTTTCTCTGCTCTTCACACCCCACCCGGGTTCCTGACATGTTaGAGGTTGCTGTGGTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: FIVSNTHASSFSALHTPPGFLTC*RLLWSL Trigger: CAGAGACCACAGCAACCTCCAACATGTCAGGAACCC...GGGTGGGGTGTGAAGAGCAGAGAAAGAGGATGCATGTGTATTTGACACAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078001.7 |
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| CDS-3UTR CCA 90 bp | TTTATTGTGTCAAATACACATGCATCCTCTTTCTCTGCTCTTCACACCCCACCCGGAGGTGCAGTATACTaGATGAAAGTCACCGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: FIVSNTHASSFSALHTPPGGAVY*MKVTAS Trigger: AGAGGCGGTGACTTTCATCCAGTATACTGCACCTCC...GGGTGGGGTGTGAAGAGCAGAGAAAGAGGATGCATGTGTATTTGACACAATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078001.7 |
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| CDS-3UTR GCA 90 bp | TTATTGTGTCAAATACACATGCATCCTCTTTCTCTGCTCTTCACACCCCACCCCAAAGTTCTCCTGGATTaGACTGCTCAGCCTTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: LLCQIHMHPLSLLFTPHPKVLLD*TAQPLK Trigger: CTTCAAAGGCTGAGCAGTGCAATCCAGGAGAACTTT...GGGGTGGGGTGTGAAGAGCAGAGAAAGAGGATGCATGTGTATTTGACACAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078001.7 |
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| CDS-3UTR CCA 90 bp | TTTATTGTGTCAAATACACATGCATCCTCTTTCTCTGCTCTTCACACCCCACCCAACAGGACCGTTTCTTaGCAAAGTTCTCCTGGATTG | + |
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Preference number: 4 (lower is better) Translates to: FIVSNTHASSFSALHTPPNRTVS*QSSPGL Trigger: CAATCCAGGAGAACTTTGCCAAGAAACGGTCCTGTT...GGGTGGGGTGTGAAGAGCAGAGAAAGAGGATGCATGTGTATTTGACACAATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078001.7 |
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| CDS-3UTR TCA 90 bp | AGCAAATCACTAATTTTATTGTGTCAAATACACATGCATCCTCTTTCTCTGCTCCGATTAGAAGAAAGATaGGCAGGACATACTGGATGC | + |
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Preference number: 4 (lower is better) Translates to: SKSLILLCQIHMHPLSLLRLEER*AGHTGC Trigger: GCATCCAGTATGTCCTGCTCATCTTTCTTCTAATCG...GAGCAGAGAAAGAGGATGCATGTGTATTTGACACAATAAAATTAGTGATTTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078001.7 |
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| CDS-3UTR CAA 90 bp | TCAGCAGGCAGAAGGCTCCCTCCTAGGCAAAGTCCAGTGTCTAGGACCAAGGCCCTGACATGTTGGAGGTaGCTGTGGTCTCTGGCACTC | + |
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Preference number: 5 (lower is better) Translates to: SAGRRLPPRQSPVSRTKALTCWR*LWSLAL Trigger: GAGTGCCAGAGACCACAGCAACCTCCAACATGTCAG...GGCCTTGGTCCTAGACACTGGACTTTGCCTAGGAGGGAGCCTTCTGCCTGCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078001.7 |
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| CDS-3UTR CAA 90 bp | TCAGCAGGCAGAAGGCTCCCTCCTAGGCAAAGTCCAGTGTCTAGGACCAAGGCCCACCGCCTCTCCTCCTaGAGAAACACAGCTCTTACT | + |
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Preference number: 5 (lower is better) Translates to: SAGRRLPPRQSPVSRTKAHRLSS*RNTALT Trigger: AGTAAGAGCTGTGTTTCTCAAGGAGGAGAGGCGGTG...GGCCTTGGTCCTAGACACTGGACTTTGCCTAGGAGGGAGCCTTCTGCCTGCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078001.7 |
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| CDS-3UTR CAA 90 bp | TCTTCACACCCCACCCCCACTTCTTCCAGTATCAGCAGGCAGAAGGCTCCCTCCGACGCTAGGCTGTCTTaGTTGTTGCAGAGGGAGTCA | + |
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Preference number: 5 (lower is better) Translates to: SSHPTPTSSSISRQKAPSDARLS*LLQRES Trigger: TGACTCCCTCTGCAACAACAAAGACAGCCTAGCGTC...GGAGGGAGCCTTCTGCCTGCTGATACTGGAAGAAGTGGGGGTGGGGTGTGAAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078001.7 |
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| CDS-3UTR CAA 90 bp | ACCCCACCCCCACTTCTTCCAGTATCAGCAGGCAGAAGGCTCCCTCCTAGGCAAAGGCTGTCTTTGTTGTaGCAGAGGGAGTCATTGCAG | + |
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Preference number: 5 (lower is better) Translates to: TPPPLLPVSAGRRLPPRQRLSLL*QRESLQ Trigger: CTGCAATGACTCCCTCTGCAACAACAAAGACAGCCT...TTGCCTAGGAGGGAGCCTTCTGCCTGCTGATACTGGAAGAAGTGGGGGTGGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078001.7 |
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| CDS-3UTR CAA 90 bp | CTCCCTCCTAGGCAAAGTCCAGTGTCTAGGACCAAGGCCTCCCCTGACCCCCAGGAATTCAAGTCTTCCTaGATAGCACTGAGTTGTGCC | + |
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Preference number: 5 (lower is better) Translates to: LPPRQSPVSRTKASPDPQEFKSS*IALSCA Trigger: GGCACAACTCAGTGCTATCAAGGAAGACTTGAATTC...CTGGGGGTCAGGGGAGGCCTTGGTCCTAGACACTGGACTTTGCCTAGGAGGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078001.7 |
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| CDS GCA 90 bp | GCCAGACTGACGCTAGGCTGTCTTTGTTGTTGCAGAGGGAGTCATTaGAGTAGTTACTGTAAGAGATGGCAACCAGGCCAGGAGGTGCAG | + |
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Preference number: 5 (lower is better) Translates to: ARLTLGCLCCCRGSH*SSYCKRWQPGQEVQ Trigger: CTGCACCTCCTGGCCTGGTTGCCATCTCTTACAGTAACTACTGCAATGACTCCCTCTGCAACAACAAAGACAGCCTAGCGTCAGTCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078001.7 ENSMUST00000205488.2 ENSMUST00000206390.2 |
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| CDS GCA 90 bp | TGGTCTCTGGCACTCGCCAGACTGACGCTAGGCTGTCTTTGTTGTTaGAGAGGGAGTCATTGCAGTAGTTACTGTAAGAGATGGCAACCA | + |
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Preference number: 5 (lower is better) Translates to: WSLALARLTLGCLCC*RGSHCSSYCKRWQP Trigger: TGGTTGCCATCTCTTACAGTAACTACTGCAATGACTCCCTCTGCAACAACAAAGACAGCCTAGCGTCAGTCTGGCGAGTGCCAGAGACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078001.7 ENSMUST00000205488.2 ENSMUST00000206390.2 |
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| CDS GCA 90 bp | GTCATTGCAGTAGTTACTGTAAGAGATGGCAACCAGGCCAGGAGGTaGAGTATACTGGATGAAAGTCACCGCCTCTCCTCCTTGAGAAAC | + |
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Preference number: 5 (lower is better) Translates to: VIAVVTVRDGNQARR*SILDESHRLSSLRN Trigger: GTTTCTCAAGGAGGAGAGGCGGTGACTTTCATCCAGTATACTGCACCTCCTGGCCTGGTTGCCATCTCTTACAGTAACTACTGCAATGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078001.7 ENSMUST00000205488.2 ENSMUST00000206390.2 |
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| CDS-3UTR CAA 90 bp | TTATTGTGTCAAATACACATGCATCCTCTTTCTCTGCTCTTCACACCCCACCCCGCTAGGCTGTCTTTGTaGTTGCAGAGGGAGTCATTG | + |
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Preference number: 5 (lower is better) Translates to: LLCQIHMHPLSLLFTPHPARLSL*LQRESL Trigger: CAATGACTCCCTCTGCAACAACAAAGACAGCCTAGC...GGGGTGGGGTGTGAAGAGCAGAGAAAGAGGATGCATGTGTATTTGACACAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078001.7 |
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| CDS-3UTR CAA 90 bp | AGCAAATCACTAATTTTATTGTGTCAAATACACATGCATCCTCTTTCTCTGCTCCAAAGTTCTCCTGGATaGCACTGCTCAGCCTTTGAA | + |
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Preference number: 5 (lower is better) Translates to: SKSLILLCQIHMHPLSLLQSSPG*HCSAFE Trigger: TTCAAAGGCTGAGCAGTGCAATCCAGGAGAACTTTG...GAGCAGAGAAAGAGGATGCATGTGTATTTGACACAATAAAATTAGTGATTTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078001.7 |
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| CDS TCA 72 bp | GCCCAGGGCCACACATGTCGGGCAGTGGCGGGTTCCTaGCATGTTGGAGGTTGCTGTGGTCTCTGGCACTCG | + |
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Preference number: 6 (lower is better) Translates to: AQGHTCRAVAGS*HVGGCCGLWHS Trigger: CGAGTGCCAGAGACCACAGCAACCTCCAACATGTCAGGAACCCGCCACTGCCCGACATGTGTGGCCCTGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078001.7 ENSMUST00000205488.2 ENSMUST00000206390.2 |
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| CDS CAA 90 bp | GAGCCCAGGGCCACACATGTCGGGCAGTGGCGGGTTCCTGACATGTaGGAGGTTGCTGTGGTCTCTGGCACTCGCCAGACTGACGCTAGG | + |
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Preference number: 6 (lower is better) Translates to: EPRATHVGQWRVPDM*EVAVVSGTRQTDAR Trigger: CCTAGCGTCAGTCTGGCGAGTGCCAGAGACCACAGCAACCTCCAACATGTCAGGAACCCGCCACTGCCCGACATGTGTGGCCCTGGGCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078001.7 ENSMUST00000205488.2 ENSMUST00000206390.2 |
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| CDS CCA 72 bp | CCACACATGTCGGGCAGTGGCGGGTTCCTGACATGTTaGAGGTTGCTGTGGTCTCTGGCACTCGCCAGACTG | + |
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Preference number: 6 (lower is better) Translates to: PHMSGSGGFLTC*RLLWSLALARL Trigger: CAGTCTGGCGAGTGCCAGAGACCACAGCAACCTCCAACATGTCAGGAACCCGCCACTGCCCGACATGTGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078001.7 ENSMUST00000205488.2 ENSMUST00000206390.2 |
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| CDS CCA 72 bp | GTAACGGAAACAGTAGCTCCAGCACCCACAGTGAAGTaGGCATCTGAGAGGCCCCGATTTCTGCCTTCCGGG | + |
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Preference number: 6 (lower is better) Translates to: VTETVAPAPTVK*ASERPRFLPSG Trigger: CCCGGAAGGCAGAAATCGGGGCCTCTCAGATGCCCACTTCACTGTGGGTGCTGGAGCTACTGTTTCCGTTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078001.7 |
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| CDS CAA 90 bp | TTGCACGGTGGCGTCCATGCCTCCTCCAGAGAATTCAAGTCTTCCTaGATAGCACTGAGTTGTGCCATTGGCACAGGGCATAGAGGGGGC | + |
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Preference number: 6 (lower is better) Translates to: LHGGVHASSREFKSS*IALSCAIGTGHRGG Trigger: GCCCCCTCTATGCCCTGTGCCAATGGCACAACTCAGTGCTATCAAGGAAGACTTGAATTCTCTGGAGGAGGCATGGACGCCACCGTGCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078001.7 ENSMUST00000205488.2 ENSMUST00000206390.2 |
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| CDS GCA 72 bp | GTAGTTACTGTAAGAGATGGCAACCAGGCCAGGAGGTaGAGTATACTGGATGAAAGTCACCGCCTCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: VVTVRDGNQARR*SILDESHRLSS Trigger: GGAGGAGAGGCGGTGACTTTCATCCAGTATACTGCACCTCCTGGCCTGGTTGCCATCTCTTACAGTAACTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078001.7 ENSMUST00000205488.2 ENSMUST00000206390.2 |
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| CDS CAA 72 bp | GGCGTCCATGCCTCCTCCAGAGAATTCAAGTCTTCCTaGATAGCACTGAGTTGTGCCATTGGCACAGGGCAT | + |
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Preference number: 6 (lower is better) Translates to: GVHASSREFKSS*IALSCAIGTGH Trigger: ATGCCCTGTGCCAATGGCACAACTCAGTGCTATCAAGGAAGACTTGAATTCTCTGGAGGAGGCATGGACGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078001.7 ENSMUST00000205488.2 ENSMUST00000206390.2 |
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| CDS GCA 72 bp | AGGACCGTTTCTTGGCAAAGTTCTCCTGGATTGCACTaGTCAGCCTTTGAAGTCCAGTTAAAGGTACGGCCT | + |
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Preference number: 6 (lower is better) Translates to: RTVSWQSSPGLH*SAFEVQLKVRP Trigger: AGGCCGTACCTTTAACTGGACTTCAAAGGCTGAGCAGTGCAATCCAGGAGAACTTTGCCAAGAAACGGTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078001.7 ENSMUST00000205488.2 ENSMUST00000206390.2 |
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| CDS GCA 72 bp | ACGCTAGGCTGTCTTTGTTGTTGCAGAGGGAGTCATTaGAGTAGTTACTGTAAGAGATGGCAACCAGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: TLGCLCCCRGSH*SSYCKRWQPGQ Trigger: CTGGCCTGGTTGCCATCTCTTACAGTAACTACTGCAATGACTCCCTCTGCAACAACAAAGACAGCCTAGCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078001.7 ENSMUST00000205488.2 ENSMUST00000206390.2 |
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| CDS GCA 72 bp | GCACTCGCCAGACTGACGCTAGGCTGTCTTTGTTGTTaGAGAGGGAGTCATTGCAGTAGTTACTGTAAGAGA | + |
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Preference number: 6 (lower is better) Translates to: ALARLTLGCLCC*RGSHCSSYCKR Trigger: TCTCTTACAGTAACTACTGCAATGACTCCCTCTGCAACAACAAAGACAGCCTAGCGTCAGTCTGGCGAGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078001.7 ENSMUST00000205488.2 ENSMUST00000206390.2 |
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| CDS CAA 72 bp | CCTGGTTCCATCTGCTTTAATCAACAGGACCGTTTCTaGGCAAAGTTCTCCTGGATTGCACTGCTCAGCCTT | + |
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Preference number: 6 (lower is better) Translates to: PGSICFNQQDRF*AKFSWIALLSL Trigger: AAGGCTGAGCAGTGCAATCCAGGAGAACTTTGCCAAGAAACGGTCCTGTTGATTAAAGCAGATGGAACCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078001.7 ENSMUST00000205488.2 ENSMUST00000206390.2 |
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| CDS CAA 90 bp | TCTGCTTTAATCAACAGGACCGTTTCTTGGCAAAGTTCTCCTGGATaGCACTGCTCAGCCTTTGAAGTCCAGTTAAAGGTACGGCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: SALINRTVSWQSSPG*HCSAFEVQLKVRPG Trigger: TCCAGGCCGTACCTTTAACTGGACTTCAAAGGCTGAGCAGTGCAATCCAGGAGAACTTTGCCAAGAAACGGTCCTGTTGATTAAAGCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078001.7 ENSMUST00000205488.2 ENSMUST00000206390.2 |
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| CDS CAA 72 bp | ATCAACAGGACCGTTTCTTGGCAAAGTTCTCCTGGATaGCACTGCTCAGCCTTTGAAGTCCAGTTAAAGGTA | + |
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Preference number: 6 (lower is better) Translates to: INRTVSWQSSPG*HCSAFEVQLKV Trigger: TACCTTTAACTGGACTTCAAAGGCTGAGCAGTGCAATCCAGGAGAACTTTGCCAAGAAACGGTCCTGTTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078001.7 ENSMUST00000205488.2 ENSMUST00000206390.2 |
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