Pregenerated sensors for TEX10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028345Ensembl transcript IDs: ENSMUST00000030030.15, ENSMUST00000155905.8, ENSMUST00000164866.2
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTGGAGAGCTCAGGGTTTCGGGAGCCAAGGTAAGAGAGCTGCAATaGCAAGCCGGCCAGCCAACGGGAGAGCACTTTGCTTCGGTATCT | + |
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Preference number: 1 (lower is better) Translates to: CGELRVSGAKVRELQ*QAGQPTGEHFASVS Trigger: AGATACCGAAGCAAAGTGCTCTCCCGTTGGCTGGCCGGCTTGCCATTGCAGCTCTCTTACCTTGGCTCCCGAAACCCTGAGCTCTCCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| 3UTR TCA 90 bp | ACTAGGATGGCATTAGTCAGCATGTGCGACCTAAGAGGCACATGCTaGAGCAGCAGGCGAAGCAGCTGGCCTACAACAGGCAGCTCCTCA | + |
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Preference number: 1 (lower is better) Translates to: TRMALVSMCDLRGTC*SSRRSSWPTTGSSS Trigger: TGAGGAGCTGCCTGTTGTAGGCCAGCTGCTTCGCCTGCTGCTTCAGCATGTGCCTCTTAGGTCGCACATGCTGACTAATGCCATCCTAGT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| 3UTR TCA 90 bp | GCCAAACTTGAGCCGAGTCTTCCCATTATGCAGCACCGACTTAGCTaGGAAAGCAAATCAGCAGGCAGAGTGGGGAGAAAATACAACAGC | + |
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Preference number: 1 (lower is better) Translates to: AKLEPSLPIMQHRLS*ESKSAGRVGRKYNS Trigger: GCTGTTGTATTTTCTCCCCACTCTGCCTGCTGATTTGCTTTCTCAGCTAAGTCGGTGCTGCATAATGGGAAGACTCGGCTCAAGTTTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| 3UTR GCA 90 bp | AAGAGAGCTGCAATGGCAAGCCGGCCAGCCAACGGGAGAGCACTTTaGTTCGGTATCTCAATCTGTAAGACCTCAATTCTTCTTTCTGAT | + |
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Preference number: 1 (lower is better) Translates to: KRAAMASRPANGRAL*FGISICKTSILLSD Trigger: ATCAGAAAGAAGAATTGAGGTCTTACAGATTGAGATACCGAAGCAAAGTGCTCTCCCGTTGGCTGGCCGGCTTGCCATTGCAGCTCTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| 3UTR TCA 90 bp | ATGATGTCAAAGCTCTGGCTTCGGGCAGGAATAACCAATAAGCTGTaGCAAACTGCCTCTGTTATGTCCCAGTGGTGCAAGAACTGGTCT | + |
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Preference number: 1 (lower is better) Translates to: MMSKLWLRAGITNKL*QTASVMSQWCKNWS Trigger: AGACCAGTTCTTGCACCACTGGGACATAACAGAGGCAGTTTGTCACAGCTTATTGGTTATTCCTGCCCGAAGCCAGAGCTTTGACATCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| 3UTR CCA 90 bp | TTATGCAGCACCGACTTAGCTGAGAAAGCAAATCAGCAGGCAGAGTaGGGAGAAAATACAACAGCTGAACTAGACGTTGCTGAGACTCTG | + |
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Preference number: 1 (lower is better) Translates to: LCSTDLAEKANQQAE*GENTTAELDVAETL Trigger: CAGAGTCTCAGCAACGTCTAGTTCAGCTGTTGTATTTTCTCCCCACTCTGCCTGCTGATTTGCTTTCTCAGCTAAGTCGGTGCTGCATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| 3UTR CCA 90 bp | ACTGCCTTAATGAGATTCTCTGTAGCATCTCTGTTTGGTTGCATCTaGATTAGCCTCCAAGAGACTCCAAGCAGCCTGTTCAGCTGCTTA | + |
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Preference number: 1 (lower is better) Translates to: TALMRFSVASLFGCI*ISLQETPSSLFSCL Trigger: TAAGCAGCTGAACAGGCTGCTTGGAGTCTCTTGGAGGCTAATCCAGATGCAACCAAACAGAGATGCTACAGAGAATCTCATTAAGGCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| 3UTR GCA 90 bp | CAATTAACTTCAAACAGGAGGTACCATGGTGCTTCTTTAATACAATaGATTCAATATACTAGGCCCTTGGGGATGGCCACTGATGTACAC | + |
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Preference number: 1 (lower is better) Translates to: QLTSNRRYHGASLIQ*IQYTRPLGMATDVH Trigger: GTGTACATCAGTGGCCATCCCCAAGGGCCTAGTATATTGAATGCATTGTATTAAAGAAGCACCATGGTACCTCCTGTTTGAAGTTAATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| 3UTR TCA 90 bp | TGTAAGTTTTTCAATAAGTCCTTATTTGCTTGTGATGCAGCAGTGTaGATAATATCAATCAGCTGTGTGGAGAGCTCAGGGTTTCGGGAG | + |
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Preference number: 1 (lower is better) Translates to: CKFFNKSLFACDAAV*IISISCVESSGFRE Trigger: CTCCCGAAACCCTGAGCTCTCCACACAGCTGATTGATATTATTCACACTGCTGCATCACAAGCAAATAAGGACTTATTGAAAAACTTACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| 3UTR-3UTR TCA 90 bp | GCTCTGTTCACCCGTAGACTCTGCAGCATCAACCTGAGGACTCTAGGCAGGAGAAAGCACAGGGGAAAGTaGTGTCTGGACGACATGAGG | + |
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Preference number: 2 (lower is better) Translates to: ALFTRRLCSINLRTLGRRKHRGK*CLDDMR Trigger: CCTCATGTCGTCCAGACATCACTTTCCCCTGTGCTT...TCTCCTGCCTAGAGTCCTCAGGTTGATGCTGCAGAGTCTACGGGTGAACAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| 3UTR-3UTR CCA 90 bp | TTCACCCGTAGACTCTGCAGCATCAACCTGAGGACTCTAGGCAGGAGAGCCAGGATGATGTCAAAGCTCTaGCTTCGGGCAGGAATAACC | + |
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Preference number: 2 (lower is better) Translates to: FTRRLCSINLRTLGRRARMMSKL*LRAGIT Trigger: GGTTATTCCTGCCCGAAGCCAGAGCTTTGACATCAT...CCTGGCTCTCCTGCCTAGAGTCCTCAGGTTGATGCTGCAGAGTCTACGGGTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| 3UTR-3UTR CCA 90 bp | TTCACCCGTAGACTCTGCAGCATCAACCTGAGGACTCTAGGCAGGAGAGCCAGGAATCAGCAGGCAGAGTaGGGAGAAAATACAACAGCT | + |
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Preference number: 2 (lower is better) Translates to: FTRRLCSINLRTLGRRARNQQAE*GENTTA Trigger: AGCTGTTGTATTTTCTCCCCACTCTGCCTGCTGATT...CCTGGCTCTCCTGCCTAGAGTCCTCAGGTTGATGCTGCAGAGTCTACGGGTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| 3UTR-3UTR TCA 90 bp | AAATGCTTACTGATGGCACTCTGCATGATGTCAAAGCTCTGGCTTCGGGCAGGACAGCACCGACTTAGCTaGGAAAGCAAATCAGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: KCLLMALCMMSKLWLRAGQHRLS*ESKSAG Trigger: GCCTGCTGATTTGCTTTCTCAGCTAAGTCGGTGCTG...TCCTGCCCGAAGCCAGAGCTTTGACATCATGCAGAGTGCCATCAGTAAGCATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| 3UTR-3UTR GCA 90 bp | TTCACCCGTAGACTCTGCAGCATCAACCTGAGGACTCTAGGCAGGAGAGCCAGGATATACAGCCAGCTGTaGTGTCAGGAATTACAGTCA | + |
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Preference number: 2 (lower is better) Translates to: FTRRLCSINLRTLGRRARIYSQL*CQELQS Trigger: TGACTGTAATTCCTGACAGCACAGCTGGCTGTATAT...CCTGGCTCTCCTGCCTAGAGTCCTCAGGTTGATGCTGCAGAGTCTACGGGTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| 3UTR-3UTR CCA 90 bp | TTCACCCGTAGACTCTGCAGCATCAACCTGAGGACTCTAGGCAGGAGAGCCAGGTCTGTTATGTCCCAGTaGTGCAAGAACTGGTCTAAA | + |
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Preference number: 2 (lower is better) Translates to: FTRRLCSINLRTLGRRARSVMSQ*CKNWSK Trigger: TTTAGACCAGTTCTTGCACCACTGGGACATAACAGA...CCTGGCTCTCCTGCCTAGAGTCCTCAGGTTGATGCTGCAGAGTCTACGGGTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| 3UTR-3UTR TCA 90 bp | CTGTTCACCCGTAGACTCTGCAGCATCAACCTGAGGACTCTAGGCAGGAGAGCCATAACCAATAAGCTGTaGCAAACTGCCTCTGTTATG | + |
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Preference number: 2 (lower is better) Translates to: LFTRRLCSINLRTLGRRAITNKL*QTASVM Trigger: CATAACAGAGGCAGTTTGTCACAGCTTATTGGTTAT...GGCTCTCCTGCCTAGAGTCCTCAGGTTGATGCTGCAGAGTCTACGGGTGAACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| 3UTR-3UTR TCA 90 bp | GCTCTGTTCACCCGTAGACTCTGCAGCATCAACCTGAGGACTCTAGGCAGGAGATTAACTACACATGTATaGTCCAGGAGCTTACACATC | + |
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Preference number: 2 (lower is better) Translates to: ALFTRRLCSINLRTLGRRLTTHV*SRSLHI Trigger: GATGTGTAAGCTCCTGGATCATACATGTGTAGTTAA...TCTCCTGCCTAGAGTCCTCAGGTTGATGCTGCAGAGTCTACGGGTGAACAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCCACTCTTTAAAGTCGTGATATTCTTGATGATCTGCTGCACTAGGATGGCACGTGACAGCCAAACTTaGGCCGAGTCTTCCCATTAT | + |
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Preference number: 2 (lower is better) Translates to: LPLFKVVIFLMICCTRMARDSQT*AESSHY Trigger: ATAATGGGAAGACTCGGCTCAAGTTTGGCTGTCACG...TGCCATCCTAGTGCAGCAGATCATCAAGAATATCACGACTTTAAAGAGTGGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCCACTCTTTAAAGTCGTGATATTCTTGATGATCTGCTGCACTAGGATGGCAGTCAACCCAACCAAATaGTTACTGATGGCACTCTGC | + |
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Preference number: 2 (lower is better) Translates to: LPLFKVVIFLMICCTRMAVNPTK*LLMALC Trigger: GCAGAGTGCCATCAGTAAGCATTTGGTTGGGTTGAC...TGCCATCCTAGTGCAGCAGATCATCAAGAATATCACGACTTTAAAGAGTGGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCCACTCTTTAAAGTCGTGATATTCTTGATGATCTGCTGCACTAGGATGGCATGTGATGCAGCAGTGTaGATAATATCAATCAGCTGT | + |
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Preference number: 2 (lower is better) Translates to: LPLFKVVIFLMICCTRMACDAAV*IISISC Trigger: ACAGCTGATTGATATTATTCACACTGCTGCATCACA...TGCCATCCTAGTGCAGCAGATCATCAAGAATATCACGACTTTAAAGAGTGGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| 3UTR CCA 72 bp | CTCAGGGTTTCGGGAGCCAAGGTAAGAGAGCTGCAATaGCAAGCCGGCCAGCCAACGGGAGAGCACTTTGCT | + |
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Preference number: 3 (lower is better) Translates to: LRVSGAKVRELQ*QAGQPTGEHFA Trigger: AGCAAAGTGCTCTCCCGTTGGCTGGCCGGCTTGCCATTGCAGCTCTCTTACCTTGGCTCCCGAAACCCTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| 3UTR GCA 72 bp | AGCTCCTCAGGAGAAGCTCTGTTCACCCGTAGACTCTaGAGCATCAACCTGAGGACTCTAGGCAGGAGAGCC | + |
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Preference number: 3 (lower is better) Translates to: SSSGEALFTRRL*SINLRTLGRRA Trigger: GGCTCTCCTGCCTAGAGTCCTCAGGTTGATGCTGCAGAGTCTACGGGTGAACAGAGCTTCTCCTGAGGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| 3UTR-3UTR CAA 90 bp | CAGGGTTTCGGGAGCCAAGGTAAGAGAGCTGCAATGGCAAGCCGGCCAGCCAACAAGCAGGCCCCTCTGTaGATACAGTGTATAAACTGC | + |
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Preference number: 3 (lower is better) Translates to: QGFGSQGKRAAMASRPANKQAPL*IQCINC Trigger: GCAGTTTATACACTGTATCAACAGAGGGGCCTGCTT...GTTGGCTGGCCGGCTTGCCATTGCAGCTCTCTTACCTTGGCTCCCGAAACCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| 3UTR GCA 72 bp | GCAATGGCAAGCCGGCCAGCCAACGGGAGAGCACTTTaGTTCGGTATCTCAATCTGTAAGACCTCAATTCTT | + |
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Preference number: 3 (lower is better) Translates to: AMASRPANGRAL*FGISICKTSIL Trigger: AAGAATTGAGGTCTTACAGATTGAGATACCGAAGCAAAGTGCTCTCCCGTTGGCTGGCCGGCTTGCCATTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| 3UTR TCA 72 bp | AAGCTCTGGCTTCGGGCAGGAATAACCAATAAGCTGTaGCAAACTGCCTCTGTTATGTCCCAGTGGTGCAAG | + |
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Preference number: 3 (lower is better) Translates to: KLWLRAGITNKL*QTASVMSQWCK Trigger: CTTGCACCACTGGGACATAACAGAGGCAGTTTGTCACAGCTTATTGGTTATTCCTGCCCGAAGCCAGAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| 3UTR GCA 72 bp | ACAGTCAACCCAACCAAATGCTTACTGATGGCACTCTaGATGATGTCAAAGCTCTGGCTTCGGGCAGGAATA | + |
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Preference number: 3 (lower is better) Translates to: TVNPTKCLLMAL*MMSKLWLRAGI Trigger: TATTCCTGCCCGAAGCCAGAGCTTTGACATCATGCAGAGTGCCATCAGTAAGCATTTGGTTGGGTTGACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| 3UTR GCA 72 bp | GCCTTAATGAGATTCTCTGTAGCATCTCTGTTTGGTTaGATCTGGATTAGCCTCCAAGAGACTCCAAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: ALMRFSVASLFG*IWISLQETPSS Trigger: GCTGCTTGGAGTCTCTTGGAGGCTAATCCAGATGCAACCAAACAGAGATGCTACAGAGAATCTCATTAAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| 3UTR CCA 72 bp | ATGAGATTCTCTGTAGCATCTCTGTTTGGTTGCATCTaGATTAGCCTCCAAGAGACTCCAAGCAGCCTGTTC | + |
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Preference number: 3 (lower is better) Translates to: MRFSVASLFGCI*ISLQETPSSLF Trigger: GAACAGGCTGCTTGGAGTCTCTTGGAGGCTAATCCAGATGCAACCAAACAGAGATGCTACAGAGAATCTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| 3UTR CCA 72 bp | ACCGACTTAGCTGAGAAAGCAAATCAGCAGGCAGAGTaGGGAGAAAATACAACAGCTGAACTAGACGTTGCT | + |
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Preference number: 3 (lower is better) Translates to: TDLAEKANQQAE*GENTTAELDVA Trigger: AGCAACGTCTAGTTCAGCTGTTGTATTTTCTCCCCACTCTGCCTGCTGATTTGCTTTCTCAGCTAAGTCGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| 3UTR GCA 72 bp | GGAGCTTACACATCACTCCAAATATACAGCCAGCTGTaGTGTCAGGAATTACAGTCAACCCAACCAAATGCT | + |
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Preference number: 3 (lower is better) Translates to: GAYTSLQIYSQL*CQELQSTQPNA Trigger: AGCATTTGGTTGGGTTGACTGTAATTCCTGACAGCACAGCTGGCTGTATATTTGGAGTGATGTGTAAGCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| 3UTR GCA 72 bp | CTGCCACTCTTTAAAGTCGTGATATTCTTGATGATCTaGTGCACTAGGATGGCATTAGTCAGCATGTGCGAC | + |
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Preference number: 3 (lower is better) Translates to: LPLFKVVIFLMI*CTRMALVSMCD Trigger: GTCGCACATGCTGACTAATGCCATCCTAGTGCAGCAGATCATCAAGAATATCACGACTTTAAAGAGTGGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| 3UTR TCA 72 bp | GCAGTCATTAACCGAGTGACTCCATCCAGAAAAAGATaGTCTCATGTACAGTATCCCAATAAGCGTGACAGC | + |
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Preference number: 3 (lower is better) Translates to: AVINRVTPSRKR*SHVQYPNKRDS Trigger: GCTGTCACGCTTATTGGGATACTGTACATGAGATCATCTTTTTCTGGATGGAGTCACTCGGTTAATGACTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| 3UTR GCA 72 bp | CCACTCTTTAAAGTCGTGATATTCTTGATGATCTGCTaGACTAGGATGGCATTAGTCAGCATGTGCGACCTA | + |
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Preference number: 3 (lower is better) Translates to: PLFKVVIFLMIC*TRMALVSMCDL Trigger: TAGGTCGCACATGCTGACTAATGCCATCCTAGTGCAGCAGATCATCAAGAATATCACGACTTTAAAGAGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| 3UTR TCA 72 bp | AGGAATGGCAGGAGAGCTTCATTAACTACACATGTATaGTCCAGGAGCTTACACATCACTCCAAATATACAG | + |
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Preference number: 3 (lower is better) Translates to: RNGRRASLTTHV*SRSLHITPNIQ Trigger: CTGTATATTTGGAGTGATGTGTAAGCTCCTGGATCATACATGTGTAGTTAATGAAGCTCTCCTGCCATTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| CDS-3UTR TCA 90 bp | TCGGGAGCCAAGGTAAGAGAGCTGCAATGGCAAGCCGGCCAGCCAACGGGAGAGTTCAGCCTCCATTGCTaGGAAGTGACTCTCCGATTA | + |
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Preference number: 4 (lower is better) Translates to: SGAKVRELQWQAGQPTGEFSLHC*EVTLRL Trigger: TAATCGGAGAGTCACTTCTCAGCAATGGAGGCTGAA...CTCTCCCGTTGGCTGGCCGGCTTGCCATTGCAGCTCTCTTACCTTGGCTCCCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| CDS-3UTR TCA 90 bp | TCGGGAGCCAAGGTAAGAGAGCTGCAATGGCAAGCCGGCCAGCCAACGGGAGAGCCATCTGCCAAGGCCTaGAGGAATTTACTGAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: SGAKVRELQWQAGQPTGEPSAKA*RNLLSL Trigger: AAGACTCAGTAAATTCCTTCAGGCCTTGGCAGATGG...CTCTCCCGTTGGCTGGCCGGCTTGCCATTGCAGCTCTCTTACCTTGGCTCCCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| CDS-3UTR GCA 90 bp | AGAGCTGCAATGGCAAGCCGGCCAGCCAACGGGAGAGCACTTTGCTTCGGTATCACTTGCTGCATAACCTaGAGAGGCTCTCGCTCAACC | + |
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Preference number: 4 (lower is better) Translates to: RAAMASRPANGRALCFGITCCIT*RGSRST Trigger: GGTTGAGCGAGAGCCTCTGCAGGTTATGCAGCAAGT...GATACCGAAGCAAAGTGCTCTCCCGTTGGCTGGCCGGCTTGCCATTGCAGCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| CDS-3UTR TCA 90 bp | CAGGGTTTCGGGAGCCAAGGTAAGAGAGCTGCAATGGCAAGCCGGCCAGCCAACTGCTGGTCGTTGGCATaGTCCTTCCAGTTGATAAAA | + |
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Preference number: 4 (lower is better) Translates to: QGFGSQGKRAAMASRPANCWSLA*SFQLIK Trigger: TTTTATCAACTGGAAGGATCATGCCAACGACCAGCA...GTTGGCTGGCCGGCTTGCCATTGCAGCTCTCTTACCTTGGCTCCCGAAACCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| CDS-3UTR TCA 90 bp | CTGTTCACCCGTAGACTCTGCAGCATCAACCTGAGGACTCTAGGCAGGAGAGCCCAGGTTTTCAGGGGATaGCAGGTCTTCATCCACAGT | + |
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Preference number: 4 (lower is better) Translates to: LFTRRLCSINLRTLGRRAQVFRG*QVFIHS Trigger: ACTGTGGATGAAGACCTGTCATCCCCTGAAAACCTG...GGCTCTCCTGCCTAGAGTCCTCAGGTTGATGCTGCAGAGTCTACGGGTGAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| CDS-3UTR CCA 90 bp | AGAGCTGCAATGGCAAGCCGGCCAGCCAACGGGAGAGCACTTTGCTTCGGTATCGAGTTGCTAGTGGCATaGGGAGTTTCTTTTTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: RAAMASRPANGRALCFGIELLVA*GVSFCS Trigger: GGAACAAAAAGAAACTCCCCATGCCACTAGCAACTC...GATACCGAAGCAAAGTGCTCTCCCGTTGGCTGGCCGGCTTGCCATTGCAGCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| CDS-3UTR GCA 90 bp | GCTCTGTTCACCCGTAGACTCTGCAGCATCAACCTGAGGACTCTAGGCAGGAGATGGGTTTCATCCTGCTaGTTCGAGAGTTTCCACAAC | + |
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Preference number: 4 (lower is better) Translates to: ALFTRRLCSINLRTLGRRWVSSC*FESFHN Trigger: GTTGTGGAAACTCTCGAAGCAGCAGGATGAAACCCA...TCTCCTGCCTAGAGTCCTCAGGTTGATGCTGCAGAGTCTACGGGTGAACAGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| CDS-3UTR CCA 90 bp | TTCACCCGTAGACTCTGCAGCATCAACCTGAGGACTCTAGGCAGGAGAGCCAGGGCCAGTAATGAGAGCTaGATAATGCTCCAGCAGAAT | + |
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Preference number: 4 (lower is better) Translates to: FTRRLCSINLRTLGRRARASNES*IMLQQN Trigger: ATTCTGCTGGAGCATTATCCAGCTCTCATTACTGGC...CCTGGCTCTCCTGCCTAGAGTCCTCAGGTTGATGCTGCAGAGTCTACGGGTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| CDS-3UTR TCA 90 bp | AGAGCTGCAATGGCAAGCCGGCCAGCCAACGGGAGAGCACTTTGCTTCGGTATCGTTTCTTTTTGTTCCTaGAGTCCTTCACTTTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: RAAMASRPANGRALCFGIVSFCS*SPSLSL Trigger: GAGAGAAAGTGAAGGACTTCAGGAACAAAAAGAAAC...GATACCGAAGCAAAGTGCTCTCCCGTTGGCTGGCCGGCTTGCCATTGCAGCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| CDS-3UTR GCA 90 bp | GGACGACATGAGGAACGCCTCGAAGGTTCTGAAGCCAGGTCAACTCCTCTTTTGACATTCAGGACTTGCTaGATAACCTGCAGAGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: GRHEERLEGSEARSTPLLTFRTC*ITCRGS Trigger: AGAGCCTCTGCAGGTTATGCAGCAAGTCCTGAATGT...CAAAAGAGGAGTTGACCTGGCTTCAGAACCTTCGAGGCGTTCCTCATGTCGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| CDS-3UTR TCA 90 bp | CTGTTCACCCGTAGACTCTGCAGCATCAACCTGAGGACTCTAGGCAGGAGAGCCCCTGAAGGAATTTACTaGGTCTTGCTAAGACTTTCA | + |
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Preference number: 4 (lower is better) Translates to: LFTRRLCSINLRTLGRRAPEGIY*VLLRLS Trigger: TGAAAGTCTTAGCAAGACTCAGTAAATTCCTTCAGG...GGCTCTCCTGCCTAGAGTCCTCAGGTTGATGCTGCAGAGTCTACGGGTGAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| CDS-3UTR TCA 90 bp | GCTCTGTTCACCCGTAGACTCTGCAGCATCAACCTGAGGACTCTAGGCAGGAGAACTGACATTTGGCTGTaGACCCCCATTTTCATAAAC | + |
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Preference number: 4 (lower is better) Translates to: ALFTRRLCSINLRTLGRRTDIWL*TPIFIN Trigger: GTTTATGAAAATGGGGGTTCACAGCCAAATGTCAGT...TCTCCTGCCTAGAGTCCTCAGGTTGATGCTGCAGAGTCTACGGGTGAACAGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| CDS-3UTR TCA 90 bp | GCTCTGTTCACCCGTAGACTCTGCAGCATCAACCTGAGGACTCTAGGCAGGAGAGAGTTTCCACAACAGTaGAATGACATTCAGGACTTG | + |
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Preference number: 4 (lower is better) Translates to: ALFTRRLCSINLRTLGRREFPQQ*NDIQDL Trigger: CAAGTCCTGAATGTCATTTCACTGTTGTGGAAACTC...TCTCCTGCCTAGAGTCCTCAGGTTGATGCTGCAGAGTCTACGGGTGAACAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| CDS-3UTR CCA 90 bp | CGACATGAGGAACGCCTCGAAGGTTCTGAAGCCAGGTCAACTCCTCTTTTGAAATTTCTCTCAACCTACTaGATCCATCTGCCAAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: RHEERLEGSEARSTPLLKFLSTY*IHLPRP Trigger: AGGCCTTGGCAGATGGATCCAGTAGGTTGAGAGAAA...TTTCAAAAGAGGAGTTGACCTGGCTTCAGAACCTTCGAGGCGTTCCTCATGTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| CDS-3UTR CCA 90 bp | AAATGCTTACTGATGGCACTCTGCATGATGTCAAAGCTCTGGCTTCGGGCAGGATATTTACCAGTCCTTTaGACAGCTGCTGATGAGAAA | + |
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Preference number: 4 (lower is better) Translates to: KCLLMALCMMSKLWLRAGYLPVL*TAADEK Trigger: TTTCTCATCAGCAGCTGTCCAAAGGACTGGTAAATA...TCCTGCCCGAAGCCAGAGCTTTGACATCATGCAGAGTGCCATCAGTAAGCATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| CDS-3UTR CCA 90 bp | GGACGACATGAGGAACGCCTCGAAGGTTCTGAAGCCAGGTCAACTCCTCTTTTGCTTTCTTCCGTTGCTTaGTTATTTCTTTTAAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: GRHEERLEGSEARSTPLLLSSVA*LFLLRH Trigger: ATGCCTTAAAAGAAATAACCAAGCAACGGAAGAAAG...CAAAAGAGGAGTTGACCTGGCTTCAGAACCTTCGAGGCGTTCCTCATGTCGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| 3UTR CAA 72 bp | GCTTCTTTAATACAATGCATTCAATATACTAGGCCCTaGGGGATGGCCACTGATGTACACGCTGAAGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: ASLIQCIQYTRP*GMATDVHAEAV Trigger: TACTGCTTCAGCGTGTACATCAGTGGCCATCCCCAAGGGCCTAGTATATTGAATGCATTGTATTAAAGAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| CDS-3UTR GCA 90 bp | GAAAAAGATGATCTCATGTACAGTATCCCAATAAGCGTGACAGCCAAACTTGAGCCTACTGGATCCATCTaGCAAGGCCTGAAGGAATTT | + |
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Preference number: 4 (lower is better) Translates to: EKDDLMYSIPISVTAKLEPTGSI*QGLKEF Trigger: AAATTCCTTCAGGCCTTGGCAGATGGATCCAGTAGG...CTCAAGTTTGGCTGTCACGCTTATTGGGATACTGTACATGAGATCATCTTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| CDS-3UTR CCA 90 bp | ACTGCCTTAATGAGATTCTCTGTAGCATCTCTGTTTGGTTGCATCTGGATTAGCGTTCAGTTCGTATTTTaGGGGCCAGGAATTGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: TALMRFSVASLFGCIWISVQFVF*GPGIEE Trigger: TTCTTCAATTCCTGGCCCCCAAAATACGAACTGAAC...GCTAATCCAGATGCAACCAAACAGAGATGCTACAGAGAATCTCATTAAGGCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| CDS-3UTR CCA 90 bp | AAAGATGATCTCATGTACAGTATCCCAATAAGCGTGACAGCCAAACTTGAGCCGGAAAGTATCCAAGACTaGGATCTGTCTCTATTTACC | + |
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Preference number: 4 (lower is better) Translates to: KDDLMYSIPISVTAKLEPESIQD*DLSLFT Trigger: GGTAAATAGAGACAGATCCCAGTCTTGGATACTTTC...CGGCTCAAGTTTGGCTGTCACGCTTATTGGGATACTGTACATGAGATCATCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| CDS-3UTR TCA 90 bp | GAAAAAGATGATCTCATGTACAGTATCCCAATAAGCGTGACAGCCAAACTTGAGATTCCTTCAGTAATGTaGGTCATGGCACTAGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: EKDDLMYSIPISVTAKLEIPSVM*VMALER Trigger: TCTCTCTAGTGCCATGACTCACATTACTGAAGGAAT...CTCAAGTTTGGCTGTCACGCTTATTGGGATACTGTACATGAGATCATCTTTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| CDS-3UTR CAA 90 bp | TTCACCCGTAGACTCTGCAGCATCAACCTGAGGACTCTAGGCAGGAGAGCCAGGGACTTTCAGCCTCCATaGCTGAGAAGTGACTCTCCG | + |
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Preference number: 5 (lower is better) Translates to: FTRRLCSINLRTLGRRARDFQPP*LRSDSP Trigger: CGGAGAGTCACTTCTCAGCAATGGAGGCTGAAAGTC...CCTGGCTCTCCTGCCTAGAGTCCTCAGGTTGATGCTGCAGAGTCTACGGGTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| CDS-3UTR CAA 90 bp | TTCACCCGTAGACTCTGCAGCATCAACCTGAGGACTCTAGGCAGGAGAGCCAGGATAAACCTGGATCTGTaGCTGGTCGTTGGCATGATC | + |
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Preference number: 5 (lower is better) Translates to: FTRRLCSINLRTLGRRARINLDL*LVVGMI Trigger: GATCATGCCAACGACCAGCAACAGATCCAGGTTTAT...CCTGGCTCTCCTGCCTAGAGTCCTCAGGTTGATGCTGCAGAGTCTACGGGTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| CDS TCA 90 bp | CAACGTATGGGTTTCATCCTGCTGCTTCGAGAGTTTCCACAACAGTaGAATGACATTCAGGACTTGCTGCATAACCTGCAGAGGCTCTCG | + |
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Preference number: 5 (lower is better) Translates to: QRMGFILLLREFPQQ*NDIQDLLHNLQRLS Trigger: CGAGAGCCTCTGCAGGTTATGCAGCAAGTCCTGAATGTCATTTCACTGTTGTGGAAACTCTCGAAGCAGCAGGATGAAACCCATACGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030030.15 ENSMUST00000155905.8 ENSMUST00000164866.2 |
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| CDS-3UTR CAA 90 bp | AAATGCTTACTGATGGCACTCTGCATGATGTCAAAGCTCTGGCTTCGGGCAGGAAATGACATTCAGGACTaGCTGCATAACCTGCAGAGG | + |
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Preference number: 5 (lower is better) Translates to: KCLLMALCMMSKLWLRAGNDIQD*LHNLQR Trigger: CCTCTGCAGGTTATGCAGCAAGTCCTGAATGTCATT...TCCTGCCCGAAGCCAGAGCTTTGACATCATGCAGAGTGCCATCAGTAAGCATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| CDS-3UTR CAA 90 bp | CTGTTCACCCGTAGACTCTGCAGCATCAACCTGAGGACTCTAGGCAGGAGAGCCTCTTTCTTCCGTTGCTaGGTTATTTCTTTTAAGGCA | + |
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Preference number: 5 (lower is better) Translates to: LFTRRLCSINLRTLGRRASFFRC*VISFKA Trigger: TGCCTTAAAAGAAATAACCAAGCAACGGAAGAAAGA...GGCTCTCCTGCCTAGAGTCCTCAGGTTGATGCTGCAGAGTCTACGGGTGAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| CDS TCA 90 bp | AGTCCTTCACTTTCTCTCAACCTACTGGATCCATCTGCCAAGGCCTaGAGGAATTTACTGAGTCTTGCTAAGACTTTCAGCCTCCATTGC | + |
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Preference number: 5 (lower is better) Translates to: SPSLSLNLLDPSAKA*RNLLSLAKTFSLHC Trigger: GCAATGGAGGCTGAAAGTCTTAGCAAGACTCAGTAAATTCCTTCAGGCCTTGGCAGATGGATCCAGTAGGTTGAGAGAAAGTGAAGGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030030.15 ENSMUST00000155905.8 ENSMUST00000164866.2 |
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| CDS-3UTR CAA 90 bp | AAAGATGATCTCATGTACAGTATCCCAATAAGCGTGACAGCCAAACTTGAGCCGATGGGGAGTTTCTTTTaGTTCCTGAAGTCCTTCACT | + |
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Preference number: 5 (lower is better) Translates to: KDDLMYSIPISVTAKLEPMGSFF*FLKSFT Trigger: AGTGAAGGACTTCAGGAACAAAAAGAAACTCCCCAT...CGGCTCAAGTTTGGCTGTCACGCTTATTGGGATACTGTACATGAGATCATCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| CDS-3UTR CAA 90 bp | ACTGCCTTAATGAGATTCTCTGTAGCATCTCTGTTTGGTTGCATCTGGATTAGCTTGATAAAAATGGAGTaGCTAGTGGCATGGGGAGTT | + |
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Preference number: 5 (lower is better) Translates to: TALMRFSVASLFGCIWISLIKME*LVAWGV Trigger: AACTCCCCATGCCACTAGCAACTCCATTTTTATCAA...GCTAATCCAGATGCAACCAAACAGAGATGCTACAGAGAATCTCATTAAGGCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155905.8 |
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| CDS TCA 90 bp | GCCAGCGAGACCATGATATCAGACAGTGTTAAGTTCAGTAAAAGATaGTCTACATTATTGGAGAGAACTGTGCAATGCTTGATGCTTTTA | + |
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Preference number: 5 (lower is better) Translates to: ASETMISDSVKFSKR*STLLERTVQCLMLL Trigger: TAAAAGCATCAAGCATTGCACAGTTCTCTCCAATAATGTAGATCATCTTTTACTGAACTTAACACTGTCTGATATCATGGTCTCGCTGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030030.15 ENSMUST00000164866.2 |
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| CDS TCA 90 bp | AACTGGAATCATTCTGTAAGGTTGAAGCATTTGCCAGCGAGACCATaGTATCAGACAGTGTTAAGTTCAGTAAAAGATGATCTACATTAT | + |
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Preference number: 5 (lower is better) Translates to: NWNHSVRLKHLPARP*YQTVLSSVKDDLHY Trigger: ATAATGTAGATCATCTTTTACTGAACTTAACACTGTCTGATATCATGGTCTCGCTGGCAAATGCTTCAACCTTACAGAATGATTCCAGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030030.15 ENSMUST00000164866.2 |
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| CDS GCA 72 bp | AACAGTGAAATGACATTCAGGACTTGCTGCATAACCTaGAGAGGCTCTCGCTCAACCCCACTCCCAACAGAA | + |
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Preference number: 6 (lower is better) Translates to: NSEMTFRTCCIT*RGSRSTPLPTE Trigger: TTCTGTTGGGAGTGGGGTTGAGCGAGAGCCTCTGCAGGTTATGCAGCAAGTCCTGAATGTCATTTCACTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030030.15 ENSMUST00000155905.8 ENSMUST00000164866.2 |
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| CDS TCA 72 bp | TACTGGATCCATCTGCCAAGGCCTGAAGGAATTTACTaGGTCTTGCTAAGACTTTCAGCCTCCATTGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: YWIHLPRPEGIY*VLLRLSASIAE Trigger: CTCAGCAATGGAGGCTGAAAGTCTTAGCAAGACTCAGTAAATTCCTTCAGGCCTTGGCAGATGGATCCAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030030.15 ENSMUST00000155905.8 ENSMUST00000164866.2 |
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| CDS TCA 72 bp | GGTTTCATCCTGCTGCTTCGAGAGTTTCCACAACAGTaGAATGACATTCAGGACTTGCTGCATAACCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: GFILLLREFPQQ*NDIQDLLHNLQ Trigger: CTGCAGGTTATGCAGCAAGTCCTGAATGTCATTTCACTGTTGTGGAAACTCTCGAAGCAGCAGGATGAAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030030.15 ENSMUST00000155905.8 ENSMUST00000164866.2 |
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| CDS GCA 72 bp | CGAAGCCATGACTCCAACGTATGGGTTTCATCCTGCTaGTTCGAGAGTTTCCACAACAGTGAAATGACATTC | + |
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Preference number: 6 (lower is better) Translates to: RSHDSNVWVSSC*FESFHNSEMTF Trigger: GAATGTCATTTCACTGTTGTGGAAACTCTCGAAGCAGCAGGATGAAACCCATACGTTGGAGTCATGGCTTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030030.15 ENSMUST00000155905.8 ENSMUST00000164866.2 |
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| CDS TCA 72 bp | CTTTCTCTCAACCTACTGGATCCATCTGCCAAGGCCTaGAGGAATTTACTGAGTCTTGCTAAGACTTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: LSLNLLDPSAKA*RNLLSLAKTFS Trigger: GCTGAAAGTCTTAGCAAGACTCAGTAAATTCCTTCAGGCCTTGGCAGATGGATCCAGTAGGTTGAGAGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030030.15 ENSMUST00000155905.8 ENSMUST00000164866.2 |
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| CDS TCA 72 bp | GAGTTGCTAGTGGCATGGGGAGTTTCTTTTTGTTCCTaGAGTCCTTCACTTTCTCTCAACCTACTGGATCCA | + |
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Preference number: 6 (lower is better) Translates to: ELLVAWGVSFCS*SPSLSLNLLDP Trigger: TGGATCCAGTAGGTTGAGAGAAAGTGAAGGACTTCAGGAACAAAAAGAAACTCCCCATGCCACTAGCAACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030030.15 ENSMUST00000155905.8 ENSMUST00000164866.2 |
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| CDS GCA 72 bp | TTTCGAAGCCATGACTCCAACGTATGGGTTTCATCCTaGTGCTTCGAGAGTTTCCACAACAGTGAAATGACA | + |
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Preference number: 6 (lower is better) Translates to: FRSHDSNVWVSS*CFESFHNSEMT Trigger: TGTCATTTCACTGTTGTGGAAACTCTCGAAGCAGCAGGATGAAACCCATACGTTGGAGTCATGGCTTCGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030030.15 ENSMUST00000155905.8 ENSMUST00000164866.2 |
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| CDS CCA 72 bp | ACTCTCCGATTAGGATTTACAGAAAGTATCCAAGACTaGGATCTGTCTCTATTTACCAGTCCTTTGGACAGC | + |
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Preference number: 6 (lower is better) Translates to: TLRLGFTESIQD*DLSLFTSPLDS Trigger: GCTGTCCAAAGGACTGGTAAATAGAGACAGATCCCAGTCTTGGATACTTTCTGTAAATCCTAATCGGAGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030030.15 ENSMUST00000155905.8 ENSMUST00000164866.2 |
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| CDS CCA 72 bp | TCTCCGTCACAAACTTCCTTATTGTTTCTATCCAACTaGAATCATTCTGTAAGGTTGAAGCATTTGCCAGCG | + |
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Preference number: 6 (lower is better) Translates to: SPSQTSLLFLSN*NHSVRLKHLPA Trigger: CGCTGGCAAATGCTTCAACCTTACAGAATGATTCCAGTTGGATAGAAACAATAAGGAAGTTTGTGACGGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030030.15 ENSMUST00000164866.2 |
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| CDS TCA 72 bp | CATTCTGTAAGGTTGAAGCATTTGCCAGCGAGACCATaGTATCAGACAGTGTTAAGTTCAGTAAAAGATGAT | + |
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Preference number: 6 (lower is better) Translates to: HSVRLKHLPARP*YQTVLSSVKDD Trigger: ATCATCTTTTACTGAACTTAACACTGTCTGATATCATGGTCTCGCTGGCAAATGCTTCAACCTTACAGAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030030.15 ENSMUST00000164866.2 |
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| CDS CAA 90 bp | GTTAAGCTTTCTATTGTTTGTCGGAAGTGTTCTATCCTCTTTAAGTaGTTCAGGCAAATGTATAGCCTTTGTCTTAAAGTTTGTAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: VKLSIVCRKCSILFK*FRQMYSLCLKVCSC Trigger: ACAGCTACAAACTTTAAGACAAAGGCTATACATTTGCCTGAACAACTTAAAGAGGATAGAACACTTCCGACAAACAATAGAAAGCTTAAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030030.15 ENSMUST00000164866.2 |
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| CDS CAA 72 bp | TCTATTGTTTGTCGGAAGTGTTCTATCCTCTTTAAGTaGTTCAGGCAAATGTATAGCCTTTGTCTTAAAGTT | + |
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Preference number: 6 (lower is better) Translates to: SIVCRKCSILFK*FRQMYSLCLKV Trigger: AACTTTAAGACAAAGGCTATACATTTGCCTGAACAACTTAAAGAGGATAGAACACTTCCGACAAACAATAGA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030030.15 ENSMUST00000164866.2 |
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