RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TET2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000040943

Ensembl transcript IDs: ENSMUST00000098603.8, ENSMUST00000196398.5, ENSMUST00000197118.5, ENSMUST00000198974.2

Found 577 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTAGAAGCAGTTACGTGTAGAGTGCTGAGGGGCATGGCACACGCATaGCCTCAGCCAATAAGAGAACCAGTGGTTTTCAAGACAAATGTC +
Preference number: 1 (lower is better)
Translates to: LEAVTCRVLRGMAHA*PQPIREPVVFKTNV
Trigger: GACATTTGTCTTGAAAACCACTGGTTCTCTTATTGGCTGAGGTCATGCGTGTGCCATGCCCCTCAGCACTCTACACGTAACTGCTTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR TCA 90 bp AATAAACATACACACAAACACACACTGCATTTGTCACAGATGCTGTaGCCTGTCCCTACGGCCCATGCCATGAAAGACATACTGCTCACA +
Preference number: 1 (lower is better)
Translates to: NKHTHKHTLHLSQML*PVPTAHAMKDILLT
Trigger: TGTGAGCAGTATGTCTTTCATGGCATGGGCCGTAGGGACAGGTCACAGCATCTGTGACAAATGCAGTGTGTGTTTGTGTGTATGTTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR GCA 90 bp CTAAGAAAAGACACCACAAAGCATGTAATGAACACAAAGGCAGCCTaGTGTTCTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGA +
Preference number: 1 (lower is better)
Translates to: LRKDTTKHVMNTKAA*CSEEHTGLCVGQHG
Trigger: TCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAGAACAGCAGGCTGCCTTTGTGTTCATTACATGCTTTGTGGTGTCTTTTCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR CCA 90 bp ATTGCCAAGCACACCTTGCAGGAACCTGATGTGGACTCAACATCATaGTTTGGAAACCTTGTGGTTTTTGTTTTTGTGTGTGTGTGTGTG +
Preference number: 1 (lower is better)
Translates to: IAKHTLQEPDVDSTS*FGNLVVFVFVCVCV
Trigger: CACACACACACACACAAAAACAAAAACCACAAGGTTTCCAAACCATGATGTTGAGTCCACATCAGGTTCCTGCAAGGTGTGCTTGGCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR CCA 90 bp CATTCAAGTAATGTTGACACCAAGCAGAAGCACTTGTATCGAGTATaGCTATGTAGTCAAGCTGTTCCTATAGAAGCAAATCACAGATCT +
Preference number: 1 (lower is better)
Translates to: HSSNVDTKQKHLYRV*LCSQAVPIEANHRS
Trigger: AGATCTGTGATTTGCTTCTATAGGAACAGCTTGACTACATAGCCATACTCGATACAAGTGCTTCTGCTTGGTGTCAACATTACTTGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR-3UTR TCA 90 bp TCAGAGGTACCCCAGTGCCTCCAGGGCCCTCGACCACACTGGCTAGATGATAGAATAGGATGCTCTTCCTaGATGCCACCATGGACCACG +
Preference number: 2 (lower is better)
Translates to: SEVPQCLQGPRPHWLDDRIGCSS*MPPWTT
Trigger: CGTGGTCCATGGTGGCATTCAGGAAGAGCATCCTAT...TCTATCATCTAGCCAGTGTGGTCGAGGGCCCTGGAGGCACTGGGGTACCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR-3UTR CCA 90 bp TCTAGGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCCTCACAGGTCGTCCTTaGTGGTCTGGCCTAATGGCC +
Preference number: 2 (lower is better)
Translates to: SRTVQLQSKAVLVTRSEALTGRP*WSGLMA
Trigger: GGCCATTAGGCCAGACCACCAAGGACGACCTGTGAG...GGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCCTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR CAA 90 bp GTGGTTTTCAAGACAAATGTCCAGCGCTTCCTTCCCACTGTGCCCTaGCATAGGATGCTCTTCCTGAATGCCACCATGGACCACGGGAGA +
Preference number: 2 (lower is better)
Translates to: VVFKTNVQRFLPTVP*HRMLFLNATMDHGR
Trigger: TCTCCCGTGGTCCATGGTGGCATTCAGGAAGAGCATCCTATGCAAGGGCACAGTGGGAAGGAAGCGCTGGACATTTGTCTTGAAAACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR-3UTR GCA 90 bp TCTAGGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCGCTTCCTTCCCACTGTaGCCTTGCATAGGATGCTCT +
Preference number: 2 (lower is better)
Translates to: SRTVQLQSKAVLVTRSEAASFPL*PCIGCS
Trigger: AGAGCATCCTATGCAAGGGCACAGTGGGAAGGAAGC...GGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCCTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR-3UTR TCA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTAATAGGATGCTCTTCCTaGATGCCACCATGGACCACG +
Preference number: 2 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLIGCSS*MPPWTT
Trigger: CGTGGTCCATGGTGGCATTCAGGAAGAGCATCCTAT...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR-3UTR TCA 90 bp AGCACACCTTGCAGGAACCTGATGTGGACTCAACATCATGGTTTGGAAACCTTGTTGTCACAGATGCTGTaGCCTGTCCCTACGGCCCAT +
Preference number: 2 (lower is better)
Translates to: STPCRNLMWTQHHGLETLLSQML*PVPTAH
Trigger: ATGGGCCGTAGGGACAGGTCACAGCATCTGTGACAA...CAAGGTTTCCAAACCATGATGTTGAGTCCACATCAGGTTCCTGCAAGGTGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR-3UTR GCA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTATGTCCCTACGGCCCATaGCATGAAAGACATACTGCT +
Preference number: 2 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLCPYGP*HERHTA
Trigger: AGCAGTATGTCTTTCATGGCATGGGCCGTAGGGACA...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR-3UTR GCA 90 bp ACAGTCCTATTGCACAGCACACCACCAGCTTCTAGGACTGTCCAGCTGCAGTCCTGTCTTCTCAACTTCTaGGGGTTTCAGTCCACTCAA +
Preference number: 2 (lower is better)
Translates to: TVLLHSTPPASRTVQLQSCLLNF*GFQSTQ
Trigger: TTGAGTGGACTGAAACCCGCAGAAGTTGAGAAGACA...GGACTGCAGCTGGACAGTCCTAGAAGCTGGTGGTGTGCTGTGCAATAGGACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR-3UTR CCA 90 bp TGTTCTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCACTCACAGGTCGTCCTTaGTGGTCTGGCCTAATGGCC +
Preference number: 2 (lower is better)
Translates to: CSEEHTGLCVGQHGLKWALTGRP*WSGLMA
Trigger: GGCCATTAGGCCAGACCACCAAGGACGACCTGTGAG...TGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR-3UTR TCA 90 bp CTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAAGCTGGCATGGCACACGCATaGCCTCAGCCAATAAGAGAA +
Preference number: 2 (lower is better)
Translates to: LKNIQVCVWDNMDLSGQAGMAHA*PQPIRE
Trigger: TTCTCTTATTGGCTGAGGTCATGCGTGTGCCATGCC...AGCTTGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR-3UTR TCA 90 bp GTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTTAGTGACTTGTCACAGATGCTGTaGCCTGTCCCTACGGCCCAT +
Preference number: 2 (lower is better)
Translates to: VCVCVCVCKADILKVFSDLSQML*PVPTAH
Trigger: ATGGGCCGTAGGGACAGGTCACAGCATCTGTGACAA...GTCACTAAAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR-3UTR TCA 90 bp AGCACACCTTGCAGGAACCTGATGTGGACTCAACATCATGGTTTGGAAACCTTGCACGGTTACACACGCTaGGTACTAGAAGCAGTTACG +
Preference number: 2 (lower is better)
Translates to: STPCRNLMWTQHHGLETLHGYTR*VLEAVT
Trigger: CGTAACTGCTTCTAGTACTCAGCGTGTGTAACCGTG...CAAGGTTTCCAAACCATGATGTTGAGTCCACATCAGGTTCCTGCAAGGTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR-3UTR GCA 90 bp CTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAAGCTTGCATTTGTCACAGATaGTGTGACCTGTCCCTACGG +
Preference number: 2 (lower is better)
Translates to: LKNIQVCVWDNMDLSGQACICHR*CDLSLR
Trigger: CCGTAGGGACAGGTCACAGCATCTGTGACAAATGCA...AGCTTGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR-3UTR CCA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTACAACATGGACTTAAGTaGGCAAGCTTTGCTCTGTCT +
Preference number: 2 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLQHGLK*ASFALS
Trigger: AGACAGAGCAAAGCTTGCCCACTTAAGTCCATGTTG...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTGGCAGCCTGCTGTTCTaGAGAACATACAGGTCTGTG +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCVQGRHSESFGSLLF*RTYRSV
Trigger: CACAGACCTGTATGTTCTTCAGAACAGCAGGCTGCC...AAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACACACACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR-3UTR TCA 90 bp ACAGTCCTATTGCACAGCACACCACCAGCTTCTAGGACTGTCCAGCTGCAGTCCAGCACCATCGTGATGTaGATTTTTCTTCAATCTCAT +
Preference number: 2 (lower is better)
Translates to: TVLLHSTPPASRTVQLQSSTIVM*IFLQSH
Trigger: ATGAGATTGAAGAAAAATTCACATCACGATGGTGCT...GGACTGCAGCTGGACAGTCCTAGAAGCTGGTGGTGTGCTGTGCAATAGGACTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR-3UTR TCA 90 bp TCTAGGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCTGGGTAGCACCATCGTaGTGTGAATTTTTCTTCAAT +
Preference number: 2 (lower is better)
Translates to: SRTVQLQSKAVLVTRSEAWVAPS*CEFFFN
Trigger: ATTGAAGAAAAATTCACATCACGATGGTGCTACCCA...GGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCCTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR-3UTR GCA 90 bp GTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTTAGTGACGCTTCCTTCCCACTGTaGCCTTGCATAGGATGCTCT +
Preference number: 2 (lower is better)
Translates to: VCVCVCVCKADILKVFSDASFPL*PCIGCS
Trigger: AGAGCATCCTATGCAAGGGCACAGTGGGAAGGAAGC...GTCACTAAAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR-3UTR GCA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTAAAGCTTTGCTCTGTCTaGAGCACCAAGGCTAATTAT +
Preference number: 2 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLKLCSV*STKANY
Trigger: ATAATTAGCCTTGGTGCTGCAGACAGAGCAAAGCTT...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR-3UTR GCA 90 bp TCCAGTATTTCTTCAGTACATCATACGTCAGCACCAGATGATCCTGCAACTGCTTGCATTTGTCACAGATaGTGTGACCTGTCCCTACGG +
Preference number: 2 (lower is better)
Translates to: SSISSVHHTSAPDDPATACICHR*CDLSLR
Trigger: CCGTAGGGACAGGTCACAGCATCTGTGACAAATGCA...AGCAGTTGCAGGATCATCTGGTGCTGACGTATGATGTACTGAAGAAATACTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR CAA 90 bp CCAAGCACACCTTGCAGGAACCTGATGTGGACTCAACATCATGGTTaGGAAACCTTGTGGTTTTTGTTTTTGTGTGTGTGTGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: PSTPCRNLMWTQHHG*ETLWFLFLCVCVCV
Trigger: CACACACACACACACACACAAAAACAAAAACCACAAGGTTTCCAAACCATGATGTTGAGTCCACATCAGGTTCCTGCAAGGTGTGCTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR-3UTR TCA 90 bp GTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTTAGTGACGCTAGTGTTGAGGTATaGCGACAAGTAGGAACACCA +
Preference number: 2 (lower is better)
Translates to: VCVCVCVCKADILKVFSDASVEV*RQVGTP
Trigger: TGGTGTTCCTACTTGTCGTCATACCTCAACACTAGC...GTCACTAAAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR CAA 90 bp AACCTGATGTGGACTCAACATCATGGTTTGGAAACCTTGTGGTTTTaGTTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAAGGCAG +
Preference number: 2 (lower is better)
Translates to: NLMWTQHHGLETLWF*FLCVCVCVCVCARQ
Trigger: CTGCCTTGCACACACACACACACACACACACACACACAAAAACAAAAACCACAAGGTTTCCAAACCATGATGTTGAGTCCACATCAGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR-3UTR TCA 90 bp AGCACACCTTGCAGGAACCTGATGTGGACTCAACATCATGGTTTGGAAACCTTGTGGGTAGCACCATCGTaGTGTGAATTTTTCTTCAAT +
Preference number: 2 (lower is better)
Translates to: STPCRNLMWTQHHGLETLWVAPS*CEFFFN
Trigger: ATTGAAGAAAAATTCACATCACGATGGTGCTACCCA...CAAGGTTTCCAAACCATGATGTTGAGTCCACATCAGGTTCCTGCAAGGTGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR-3UTR GCA 90 bp CAGCTCAGGGCTTCCTATTTTACACTTTTTACTCTGCTGAATGCCAACTCTCCATGTCTTCTCAACTTCTaGGGGTTTCAGTCCACTCAA +
Preference number: 2 (lower is better)
Translates to: QLRASYFTLFTLLNANSPCLLNF*GFQSTQ
Trigger: TTGAGTGGACTGAAACCCGCAGAAGTTGAGAAGACA...TGGAGAGTTGGCATTCAGCAGAGTAAAAAGTGTAAAATAGGAAGCCCTGAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR-3UTR TCA 90 bp CTCAACATCATGGTTTGGAAACCTTGTGGTTTTTGTTTTTGTGTGTGTGTGTGTCACGGTTACACACGCTaGGTACTAGAAGCAGTTACG +
Preference number: 2 (lower is better)
Translates to: LNIMVWKPCGFCFCVCVCHGYTR*VLEAVT
Trigger: CGTAACTGCTTCTAGTACTCAGCGTGTGTAACCGTG...ACACACACACACACAAAAACAAAAACCACAAGGTTTCCAAACCATGATGTTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR-3UTR TCA 90 bp AGCACACCTTGCAGGAACCTGATGTGGACTCAACATCATGGTTTGGAAACCTTGCAATCCAGAGGCCTTTaGAATGTCCACATTTTAAAA +
Preference number: 2 (lower is better)
Translates to: STPCRNLMWTQHHGLETLQSRGL*NVHILK
Trigger: TTTTAAAATGTGGACATTTCAAAGGCCTCTGGATTG...CAAGGTTTCCAAACCATGATGTTGAGTCCACATCAGGTTCCTGCAAGGTGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR-3UTR TCA 90 bp CTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAAGCTCAATCCAGAGGCCTTTaGAATGTCCACATTTTAAAA +
Preference number: 2 (lower is better)
Translates to: LKNIQVCVWDNMDLSGQAQSRGL*NVHILK
Trigger: TTTTAAAATGTGGACATTTCAAAGGCCTCTGGATTG...AGCTTGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTTACAAAGGTCTCCACTaGCGCAAAGCTATTTGCAAA +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCVQGRHSESFYKGLH*RKAICK
Trigger: TTTGCAAATAGCTTTGCGTCAGTGGAGACCTTTGTA...AAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACACACACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR-3UTR GCA 90 bp CTCAACATCATGGTTTGGAAACCTTGTGGTTTTTGTTTTTGTGTGTGTGTGTGTTGTCCCTACGGCCCATaGCATGAAAGACATACTGCT +
Preference number: 2 (lower is better)
Translates to: LNIMVWKPCGFCFCVCVCCPYGP*HERHTA
Trigger: AGCAGTATGTCTTTCATGGCATGGGCCGTAGGGACA...ACACACACACACACAAAAACAAAAACCACAAGGTTTCCAAACCATGATGTTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTCACACAAACACACACTaGATTTGTCACAGATGCTGT +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCVQGRHSESFHTNTH*ICHRCC
Trigger: ACAGCATCTGTGACAAATGCAGTGTGTGTTTGTGTG...AAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACACACACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR-3UTR GCA 90 bp CAGCTCAGGGCTTCCTATTTTACACTTTTTACTCTGCTGAATGCCAACTCTCCAAACACAAAGGCAGCCTaGTGTTCTGAAGAACATACA +
Preference number: 2 (lower is better)
Translates to: QLRASYFTLFTLLNANSPNTKAA*CSEEHT
Trigger: TGTATGTTCTTCAGAACAGCAGGCTGCCTTTGTGTT...TGGAGAGTTGGCATTCAGCAGAGTAAAAAGTGTAAAATAGGAAGCCCTGAGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTACATTAAGATCTATGTaGAGCAATCTGGGTAGCACC +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCVQGRHSESFTLRSM*SNLGST
Trigger: GGTGCTACCCAGATTGCTCCACATAGATCTTAATGT...AAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACACACACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR-3UTR TCA 90 bp CTCAACATCATGGTTTGGAAACCTTGTGGTTTTTGTTTTTGTGTGTGTGTGTGTGCTAGTGTTGAGGTATaGCGACAAGTAGGAACACCA +
Preference number: 2 (lower is better)
Translates to: LNIMVWKPCGFCFCVCVCASVEV*RQVGTP
Trigger: TGGTGTTCCTACTTGTCGTCATACCTCAACACTAGC...ACACACACACACACAAAAACAAAAACCACAAGGTTTCCAAACCATGATGTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTCACTTTTTACTCTGCTaGATGCCAACTCTCCAAAAT +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCVQGRHSESFHFLLC*MPTLQN
Trigger: ATTTTGGAGAGTTGGCATTCAGCAGAGTAAAAAGTG...AAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACACACACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR-3UTR TCA 90 bp CAGCTCAGGGCTTCCTATTTTACACTTTTTACTCTGCTGAATGCCAACTCTCCACTTTGCATAAACAGATaGCATGTTAGCATAAGGAGA +
Preference number: 2 (lower is better)
Translates to: QLRASYFTLFTLLNANSPLCINR*HVSIRR
Trigger: TCTCCTTATGCTAACATGTCATCTGTTTATGCAAAG...TGGAGAGTTGGCATTCAGCAGAGTAAAAAGTGTAAAATAGGAAGCCCTGAGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR-3UTR CCA 90 bp CTCAACATCATGGTTTGGAAACCTTGTGGTTTTTGTTTTTGTGTGTGTGTGTGTCAACATGGACTTAAGTaGGCAAGCTTTGCTCTGTCT +
Preference number: 2 (lower is better)
Translates to: LNIMVWKPCGFCFCVCVCQHGLK*ASFALS
Trigger: AGACAGAGCAAAGCTTGCCCACTTAAGTCCATGTTG...ACACACACACACACAAAAACAAAAACCACAAGGTTTCCAAACCATGATGTTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR CAA 90 bp ACATCACTGTGCGTCAATCAAGATGAAAAATTCATTCAAGTAATGTaGACACCAAGCAGAAGCACTTGTATCGAGTATGGCTATGTAGTC +
Preference number: 2 (lower is better)
Translates to: TSLCVNQDEKFIQVM*TPSRSTCIEYGYVV
Trigger: GACTACATAGCCATACTCGATACAAGTGCTTCTGCTTGGTGTCAACATTACTTGAATGAATTTTTCATCTTGATTGACGCACAGTGATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR-3UTR TCA 90 bp CTCAACATCATGGTTTGGAAACCTTGTGGTTTTTGTTTTTGTGTGTGTGTGTGTCACTTTTTACTCTGCTaGATGCCAACTCTCCAAAAT +
Preference number: 2 (lower is better)
Translates to: LNIMVWKPCGFCFCVCVCHFLLC*MPTLQN
Trigger: ATTTTGGAGAGTTGGCATTCAGCAGAGTAAAAAGTG...ACACACACACACACAAAAACAAAAACCACAAGGTTTCCAAACCATGATGTTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR-3UTR TCA 90 bp CTCAACATCATGGTTTGGAAACCTTGTGGTTTTTGTTTTTGTGTGTGTGTGTGTGCAAGGCAGACATTCTaGAAGTTTTTAGTGACAAAT +
Preference number: 2 (lower is better)
Translates to: LNIMVWKPCGFCFCVCVCARQTF*KFLVTN
Trigger: ATTTGTCACTAAAAACTTTCAGAATGTCTGCCTTGC...ACACACACACACACAAAAACAAAAACCACAAGGTTTCCAAACCATGATGTTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR GCA 72 bp TGCACAGCACACCACCAGCTTCTAGGACTGTCCAGCTaGAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAG +
Preference number: 3 (lower is better)
Translates to: CTAHHQLLGLSS*SPKLSSSLDQK
Trigger: CTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCCTAGAAGCTGGTGGTGTGCTGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR-3UTR CAA 90 bp CTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAAGCTCTTCCCACTGTGCCCTaGCATAGGATGCTCTTCCTG +
Preference number: 3 (lower is better)
Translates to: LKNIQVCVWDNMDLSGQALPTVP*HRMLFL
Trigger: CAGGAAGAGCATCCTATGCAAGGGCACAGTGGGAAG...AGCTTGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR TCA 72 bp GTTACGTGTAGAGTGCTGAGGGGCATGGCACACGCATaGCCTCAGCCAATAAGAGAACCAGTGGTTTTCAAG +
Preference number: 3 (lower is better)
Translates to: VTCRVLRGMAHA*PQPIREPVVFK
Trigger: CTTGAAAACCACTGGTTCTCTTATTGGCTGAGGTCATGCGTGTGCCATGCCCCTCAGCACTCTACACGTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR CCA 72 bp CATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTaGGCAAGCTTTGCTCTGTCTGCAGCACCAAGGCTA +
Preference number: 3 (lower is better)
Translates to: HTGLCVGQHGLK*ASFALSAAPRL
Trigger: TAGCCTTGGTGCTGCAGACAGAGCAAAGCTTGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR-3UTR CAA 90 bp TGTTCTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCACTTCCCACTGTGCCCTaGCATAGGATGCTCTTCCTG +
Preference number: 3 (lower is better)
Translates to: CSEEHTGLCVGQHGLKWALPTVP*HRMLFL
Trigger: CAGGAAGAGCATCCTATGCAAGGGCACAGTGGGAAG...TGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR TCA 72 bp TCCTTCCCACTGTGCCCTTGCATAGGATGCTCTTCCTaGATGCCACCATGGACCACGGGAGAGATTAAATAT +
Preference number: 3 (lower is better)
Translates to: SFPLCPCIGCSS*MPPWTTGEIKY
Trigger: ATATTTAATCTCTCCCGTGGTCCATGGTGGCATTCAGGAAGAGCATCCTATGCAAGGGCACAGTGGGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR TCA 72 bp ACACACAAACACACACTGCATTTGTCACAGATGCTGTaGCCTGTCCCTACGGCCCATGCCATGAAAGACATA +
Preference number: 3 (lower is better)
Translates to: THKHTLHLSQML*PVPTAHAMKDI
Trigger: TATGTCTTTCATGGCATGGGCCGTAGGGACAGGTCACAGCATCTGTGACAAATGCAGTGTGTGTTTGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR TCA 72 bp CAGTATTTCTTCAGTACATCATACGTCAGCACCAGATaGTCCTGCAACTGCTCTACTACAGCGCTGTGTCCC +
Preference number: 3 (lower is better)
Translates to: QYFFSTSYVSTR*SCNCSTTALCP
Trigger: GGGACACAGCGCTGTAGTAGAGCAGTTGCAGGATCATCTGGTGCTGACGTATGATGTACTGAAGAAATACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR TCA 72 bp CTCCTGTTGGCCAGCAGTTTGACAAATGACAGTGGGTaGCATGTAAAGCAAATATTCCTTAGGGATGGCTGG +
Preference number: 3 (lower is better)
Translates to: LLLASSLTNDSG*HVKQIFLRDGW
Trigger: CCAGCCATCCCTAAGGAATATTTGCTTTACATGTCACCCACTGTCATTTGTCAAACTGCTGGCCAACAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR GCA 72 bp GACACCACAAAGCATGTAATGAACACAAAGGCAGCCTaGTGTTCTGAAGAACATACAGGTCTGTGTGTGGGA +
Preference number: 3 (lower is better)
Translates to: DTTKHVMNTKAA*CSEEHTGLCVG
Trigger: TCCCACACACAGACCTGTATGTTCTTCAGAACAGCAGGCTGCCTTTGTGTTCATTACATGCTTTGTGGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR-3UTR CAA 90 bp GTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTTAGTGACTTTAGTACCTTAGCATaGCCCAAGTTGCCAAAGCTT +
Preference number: 3 (lower is better)
Translates to: VCVCVCVCKADILKVFSDFSTLA*PKLPKL
Trigger: AAGCTTTGGCAACTTGGGCAATGCTAAGGTACTAAA...GTCACTAAAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR CCA 72 bp CTGATGTGGACTCAACATCATGGTTTGGAAACCTTGTaGTTTTTGTTTTTGTGTGTGTGTGTGTGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: LMWTQHHGLETL*FLFLCVCVCVC
Trigger: ACACACACACACACACACACACAAAAACAAAAACCACAAGGTTTCCAAACCATGATGTTGAGTCCACATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR TCA 72 bp TGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTaGAAGTTTTTAGTGACAAATGTGACTGATGGTAAA +
Preference number: 3 (lower is better)
Translates to: CVCVCVCARQTF*KFLVTNVTDGK
Trigger: TTTACCATCAGTCACATTTGTCACTAAAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR CCA 72 bp GCATATCTATACATTATAGTCCTACAAGGACATCGGTaGATAACTACAATCCAGAGGCCTTTGAAATGTCCA +
Preference number: 3 (lower is better)
Translates to: AYLYIIVLQGHR*ITTIQRPLKCP
Trigger: TGGACATTTCAAAGGCCTCTGGATTGTAGTTATCCACCGATGTCCTTGTAGGACTATAATGTATAGATATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR GCA 72 bp AGTTATCAGTACATATACAAGCAAACTACGAGGGATTaGAATCCTCTGAAAGCGAATATATTAACCGACAAC +
Preference number: 3 (lower is better)
Translates to: SYQYIYKQTTRD*NPLKANILTDN
Trigger: GTTGTCGGTTAATATATTCGCTTTCAGAGGATTGCAATCCCTCGTAGTTTGCTTGTATATGTACTGATAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp TCAGAGGTACCCCAGTGCCTCCAGGGCCCTCGACCACACTGGCTAGATGATAGAGGCCTCTGCCCTTGCTaGAGGTGCCTCTGGAGTGTT +
Preference number: 4 (lower is better)
Translates to: SEVPQCLQGPRPHWLDDRGLCPC*RCLWSV
Trigger: AACACTCCAGAGGCACCTTCAGCAAGGGCAGAGGCC...TCTATCATCTAGCCAGTGTGGTCGAGGGCCCTGGAGGCACTGGGGTACCTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTACGGCTGCGGCTGAGGTaGCTGCGGCTGCTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLRLRLR*LRLLWP
Trigger: AGGCCACAGCAGCCGCAGCCACCTCAGCCGCAGCCG...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTAGGCTGTGGCTGTGGCTaGGGTGTCGTCTGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLGCGCG*GVVCGC
Trigger: GCAGCCGCAGACGACACCTCAGCCACAGCCACAGCC...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp TCAGAGGTACCCCAGTGCCTCCAGGGCCCTCGACCACACTGGCTAGATGATAGAGCTGGAGACTCACCCTaGCTTCTGTCCTTAAGCCCC +
Preference number: 4 (lower is better)
Translates to: SEVPQCLQGPRPHWLDDRAGDSP*LLSLSP
Trigger: GGGGCTTAAGGACAGAAGCCAGGGTGAGTCTCCAGC...TCTATCATCTAGCCAGTGTGGTCGAGGGCCCTGGAGGCACTGGGGTACCTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp TCAGAGGTACCCCAGTGCCTCCAGGGCCCTCGACCACACTGGCTAGATGATAGAGGATGCTGGTGTTTGTaGTGCCTGCGTCTGAGGAGT +
Preference number: 4 (lower is better)
Translates to: SEVPQCLQGPRPHWLDDRGCWCL*CLRLRS
Trigger: ACTCCTCAGACGCAGGCATCACAAACACCAGCATCC...TCTATCATCTAGCCAGTGTGGTCGAGGGCCCTGGAGGCACTGGGGTACCTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTAAGGCGTGGCTGGAACTaGTCCCCGAAGCTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLRRGWN*SPKLLP
Trigger: CGGCAGCAGCTTCGGGGAGCAGTTCCAGCCACGCCT...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp AGCACACCTTGCAGGAACCTGATGTGGACTCAACATCATGGTTTGGAAACCTTGGGCTGTGGCTGTGGCTaGGGTGTCGTCTGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: STPCRNLMWTQHHGLETLGCGCG*GVVCGC
Trigger: GCAGCCGCAGACGACACCTCAGCCACAGCCACAGCC...CAAGGTTTCCAAACCATGATGTTGAGTCCACATCAGGTTCCTGCAAGGTGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp ACAGTCCTATTGCACAGCACACCACCAGCTTCTAGGACTGTCCAGCTGCAGTCCTCAGGCTGCTTCTCCTaGCTGCTGCCAGTCAGACTG +
Preference number: 4 (lower is better)
Translates to: TVLLHSTPPASRTVQLQSSGCFS*LLPVRL
Trigger: CAGTCTGACTGGCAGCAGTCAGGAGAAGCAGCCTGA...GGACTGCAGCTGGACAGTCCTAGAAGCTGGTGGTGTGCTGTGCAATAGGACTGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp ACAGTCCTATTGCACAGCACACCACCAGCTTCTAGGACTGTCCAGCTGCAGTCCGGCCTTAGTCACCATTaGAGCTGGCTCTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: TVLLHSTPPASRTVQLQSGLSHH*SWLWRQ
Trigger: CTGCCTCCAGAGCCAGCTGCAATGGTGACTAAGGCC...GGACTGCAGCTGGACAGTCCTAGAAGCTGGTGGTGTGCTGTGCAATAGGACTGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTACTGTGGCTGTGGCTGTaGCTGAGGTGTCGTCTGCGG +
Preference number: 4 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLLWLWL*LRCRLR
Trigger: CCGCAGACGACACCTCAGCCACAGCCACAGCCACAG...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTAGGAGGGGTCTGTGTCTaGCTTCCTCCTTGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLGGVCV*LPPCSG
Trigger: GCCTGAGCAAGGAGGAAGTCAGACACAGACCCCTCC...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp ACAGTCCTATTGCACAGCACACCACCAGCTTCTAGGACTGTCCAGCTGCAGTCCAGTCCAAACATGCAGTaGCTCCTGAGAATGGCCGGC +
Preference number: 4 (lower is better)
Translates to: TVLLHSTPPASRTVQLQSSPNMQ*LLRMAG
Trigger: GCCGGCCATTCTCAGGAGTCACTGCATGTTTGGACT...GGACTGCAGCTGGACAGTCCTAGAAGCTGGTGGTGTGCTGTGCAATAGGACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTAGGCCTCTGCCCTTGCTaGAGGTGCCTCTGGAGTGTT +
Preference number: 4 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLGLCPC*RCLWSV
Trigger: AACACTCCAGAGGCACCTTCAGCAAGGGCAGAGGCC...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp TCTAGGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCGAGATCCTGGTGGGGTaGTTCCGGTCGGGATCGTTT +
Preference number: 4 (lower is better)
Translates to: SRTVQLQSKAVLVTRSEAEILVG*FRSGSF
Trigger: AAACGATCCCGACCGGAATCACCCCACCAGGATCTC...GGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp TCAGAGGTACCCCAGTGCCTCCAGGGCCCTCGACCACACTGGCTAGATGATAGACAGCAAGAGACTGGATaGAACGCAGGTAACTGGGTT +
Preference number: 4 (lower is better)
Translates to: SEVPQCLQGPRPHWLDDRQQETG*NAGNWV
Trigger: AACCCAGTTACCTGCGTTTCATCCAGTCTCTTGCTG...TCTATCATCTAGCCAGTGTGGTCGAGGGCCCTGGAGGCACTGGGGTACCTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp ACAGTCCTATTGCACAGCACACCACCAGCTTCTAGGACTGTCCAGCTGCAGTCCTATCCAGCCAGGTGCTaGCTGTACAGAGCCTTGCGT +
Preference number: 4 (lower is better)
Translates to: TVLLHSTPPASRTVQLQSYPARC*LYRALR
Trigger: ACGCAAGGCTCTGTACAGGCAGCACCTGGCTGGATA...GGACTGCAGCTGGACAGTCCTAGAAGCTGGTGGTGTGCTGTGCAATAGGACTGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp ACAGTCCTATTGCACAGCACACCACCAGCTTCTAGGACTGTCCAGCTGCAGTCCTTACCGGGCATGATATaGTGTGGCTGTGGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: TVLLHSTPPASRTVQLQSLPGMI*CGCGCG
Trigger: GCCACAGCCACAGCCACAGCATATCATGCCCGGTAA...GGACTGCAGCTGGACAGTCCTAGAAGCTGGTGGTGTGCTGTGCAATAGGACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp AGCACACCTTGCAGGAACCTGATGTGGACTCAACATCATGGTTTGGAAACCTTGAGGCGTGGCTGGAACTaGTCCCCGAAGCTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: STPCRNLMWTQHHGLETLRRGWN*SPKLLP
Trigger: CGGCAGCAGCTTCGGGGAGCAGTTCCAGCCACGCCT...CAAGGTTTCCAAACCATGATGTTGAGTCCACATCAGGTTCCTGCAAGGTGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp TCTAGGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCGGAATGGACTCAGTCTaGTGCCCTCAGCATGGGTGG +
Preference number: 4 (lower is better)
Translates to: SRTVQLQSKAVLVTRSEAGMDSV*CPQHGW
Trigger: CCACCCATGCTGAGGGCACCAGACTGAGTCCATTCC...GGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCCTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTAACAGCAGCTGCATCCTaGCCTGACACCTCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLTAAAS*PDTSGC
Trigger: GCAGCCTGAGGTGTCAGGCCAGGATGCAGCTGCTGT...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp ACAGTCCTATTGCACAGCACACCACCAGCTTCTAGGACTGTCCAGCTGCAGTCCGTACAAGTGAGATCCTaGTGGGGTGATTCCGGTCGG +
Preference number: 4 (lower is better)
Translates to: TVLLHSTPPASRTVQLQSVQVRS*WGDSGR
Trigger: CCGACCGGAATCACCCCACCAGGATCTCACTTGTAC...GGACTGCAGCTGGACAGTCCTAGAAGCTGGTGGTGTGCTGTGCAATAGGACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp TCAGAGGTACCCCAGTGCCTCCAGGGCCCTCGACCACACTGGCTAGATGATAGAAGAGAGATGGTTCACTaGCTGTGCGTTTTATCCCTC +
Preference number: 4 (lower is better)
Translates to: SEVPQCLQGPRPHWLDDRREMVH*LCVLSL
Trigger: GAGGGATAAAACGCACAGTCAGTGAACCATCTCTCT...TCTATCATCTAGCCAGTGTGGTCGAGGGCCCTGGAGGCACTGGGGTACCTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp TCAGAGGTACCCCAGTGCCTCCAGGGCCCTCGACCACACTGGCTAGATGATAGATGCTGCTGGCAGATTTaGGGGAAATTTGAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: SEVPQCLQGPRPHWLDDRCCWQI*GKFEFW
Trigger: CCAGAACTCAAATTTCCCTCAAATCTGCCAGCAGCA...TCTATCATCTAGCCAGTGTGGTCGAGGGCCCTGGAGGCACTGGGGTACCTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp TCTAGGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCGAGAGTTACCGGGCATaGTATGCTGTGGCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: SRTVQLQSKAVLVTRSEAESYRA*YAVAVA
Trigger: AGCCACAGCCACAGCATATCATGCCCGGTAACTCTC...GGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCCTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTATCAGGCTGCTTCTCCTaGCTGCTGCCAGTCAGACTG +
Preference number: 4 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLSGCFS*LLPVRL
Trigger: CAGTCTGACTGGCAGCAGTCAGGAGAAGCAGCCTGA...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp TCTAGGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATGGACTCAGTCTGGTaGCCTCAGCATGGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: SRTVQLQSKAVLVTRSEAMDSVW*PQHGWF
Trigger: GAACCACCCATGCTGAGGGCACCAGACTGAGTCCAT...GGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCCTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp TCAGAGGTACCCCAGTGCCTCCAGGGCCCTCGACCACACTGGCTAGATGATAGATACATTTGTGCCTTCTaGTCTGGCTGGGCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: SEVPQCLQGPRPHWLDDRYICAF*SGWAVF
Trigger: GAAAACAGCCCAGCCAGAGCAGAAGGCACAAATGTA...TCTATCATCTAGCCAGTGTGGTCGAGGGCCCTGGAGGCACTGGGGTACCTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp ACAGTCCTATTGCACAGCACACCACCAGCTTCTAGGACTGTCCAGCTGCAGTCCTGGTGCTATCAGGAATaGACTCAGTCTGGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: TVLLHSTPPASRTVQLQSWCYQE*TQSGAL
Trigger: GAGGGCACCAGACTGAGTCCATTCCTGATAGCACCA...GGACTGCAGCTGGACAGTCCTAGAAGCTGGTGGTGTGCTGTGCAATAGGACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp ACAGTCCTATTGCACAGCACACCACCAGCTTCTAGGACTGTCCAGCTGCAGTCCGCCAGAGGTTCTGTATaGCTGATGGGAGAAGGTGGT +
Preference number: 4 (lower is better)
Translates to: TVLLHSTPPASRTVQLQSARGSV*LMGEGG
Trigger: ACCACCTTCTCCCATCAGCCATACAGAACCTCTGGC...GGACTGCAGCTGGACAGTCCTAGAAGCTGGTGGTGTGCTGTGCAATAGGACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp CTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAAGCTAGCTGCCTCAGCTGGTaGGGCTGGAGACTCACCCTG +
Preference number: 4 (lower is better)
Translates to: LKNIQVCVWDNMDLSGQASCLSW*GWRLTL
Trigger: CAGGGTGAGTCTCCAGCCCCACCAGCTGAGGCAGCT...AGCTTGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp AGCACACCTTGCAGGAACCTGATGTGGACTCAACATCATGGTTTGGAAACCTTGTTGACAGGGCCGGTCTaGGAGTGGAGGACTGAGTGC +
Preference number: 4 (lower is better)
Translates to: STPCRNLMWTQHHGLETLLTGPV*EWRTEC
Trigger: GCACTCAGTCCTCCACTCTCAGACCGGCCCTGTCAA...CAAGGTTTCCAAACCATGATGTTGAGTCCACATCAGGTTCCTGCAAGGTGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp TCAGAGGTACCCCAGTGCCTCCAGGGCCCTCGACCACACTGGCTAGATGATAGAAAAGCTTTCTGGAACTaGAGATGTTGGTCCCCCATA +
Preference number: 4 (lower is better)
Translates to: SEVPQCLQGPRPHWLDDRKAFWN*RCWSPI
Trigger: TATGGGGGACCAACATCTTCAGTTCCAGAAAGCTTT...TCTATCATCTAGCCAGTGTGGTCGAGGGCCCTGGAGGCACTGGGGTACCTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp TCAGAGGTACCCCAGTGCCTCCAGGGCCCTCGACCACACTGGCTAGATGATAGACGTGTTTCTGTGACTTaGGAGTCAGAGCCTTATAGT +
Preference number: 4 (lower is better)
Translates to: SEVPQCLQGPRPHWLDDRRVSVT*ESEPYS
Trigger: ACTATAAGGCTCTGACTCTCAAGTCACAGAAACACG...TCTATCATCTAGCCAGTGTGGTCGAGGGCCCTGGAGGCACTGGGGTACCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTAAGTCCAAACATGCAGTaGCTCCTGAGAATGGCCGGC +
Preference number: 4 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLSPNMQ*LLRMAG
Trigger: GCCGGCCATTCTCAGGAGTCACTGCATGTTTGGACT...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp TCAGAGGTACCCCAGTGCCTCCAGGGCCCTCGACCACACTGGCTAGATGATAGACATCAGCTTTGTATGTaGGGAAGACTTTCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: SEVPQCLQGPRPHWLDDRHQLCM*GRLSLL
Trigger: GAGAAGGGAAAGTCTTCCTCACATACAAAGCTGATG...TCTATCATCTAGCCAGTGTGGTCGAGGGCCCTGGAGGCACTGGGGTACCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTACCAAACGTCTGTTGGTaGAGGGTGTGGATGGGTGGT +
Preference number: 4 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLPNVCW*RVWMGG
Trigger: ACCACCCATCCACACCCTTCACCAACAGACGTTTGG...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp TCTAGGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCGCAGCTCCCATGAAATaGCTATCCATCTTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: SRTVQLQSKAVLVTRSEAAAPMK*LSILGV
Trigger: CACCCCCAAGATGGATAGTCATTTCATGGGAGCTGC...GGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCCTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp TCTAGGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCCCCTGGAAGCACTCTTaGGAGCCCATTGGCTATGTT +
Preference number: 4 (lower is better)
Translates to: SRTVQLQSKAVLVTRSEAPWKHS*EPIGYV
Trigger: AACATAGCCAATGGGCTCTCAAGAGTGCTTCCAGGG...GGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCCTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp TCAGAGGTACCCCAGTGCCTCCAGGGCCCTCGACCACACTGGCTAGATGATAGAATAAGAATTGACCCATaGGTTGGAGCTATAGCCACC +
Preference number: 4 (lower is better)
Translates to: SEVPQCLQGPRPHWLDDRIRIDP*VGAIAT
Trigger: GGTGGCTATAGCTCCAACTCATGGGTCAATTCTTAT...TCTATCATCTAGCCAGTGTGGTCGAGGGCCCTGGAGGCACTGGGGTACCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp TCAGAGGTACCCCAGTGCCTCCAGGGCCCTCGACCACACTGGCTAGATGATAGAGATGGTTTTGTTTTCTaGACGAGATGGGCCTATGTC +
Preference number: 4 (lower is better)
Translates to: SEVPQCLQGPRPHWLDDRDGFVF*TRWAYV
Trigger: GACATAGGCCCATCTCGTGCAGAAAACAAAACCATC...TCTATCATCTAGCCAGTGTGGTCGAGGGCCCTGGAGGCACTGGGGTACCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTATCCTTCGGAATCTCTTaGTCCCTGTGCCCCATCAGG +
Preference number: 4 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLSFGIS*SLCPIR
Trigger: CCTGATGGGGCACAGGGAGCAAGAGATTCCGAAGGA...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp TCAGAGGTACCCCAGTGCCTCCAGGGCCCTCGACCACACTGGCTAGATGATAGACACGAGCCTTCTCTTTaGTTATCATTGCTACCTTGG +
Preference number: 4 (lower is better)
Translates to: SEVPQCLQGPRPHWLDDRHEPSL*LSLLPW
Trigger: CCAAGGTAGCAATGATAAGCAAAGAGAAGGCTCGTG...TCTATCATCTAGCCAGTGTGGTCGAGGGCCCTGGAGGCACTGGGGTACCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp ACAGTCCTATTGCACAGCACACCACCAGCTTCTAGGACTGTCCAGCTGCAGTCCAACGGGCTTCCATTCTaGAGTTTGACAGCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: TVLLHSTPPASRTVQLQSNGLPF*SLTARG
Trigger: ACCTCTGGCTGTCAAACTCCAGAATGGAAGCCCGTT...GGACTGCAGCTGGACAGTCCTAGAAGCTGGTGGTGTGCTGTGCAATAGGACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp TCAGAGGTACCCCAGTGCCTCCAGGGCCCTCGACCACACTGGCTAGATGATAGAGGGTGTATGTACAGATaGATTCAGACTCTGGCTAGA +
Preference number: 4 (lower is better)
Translates to: SEVPQCLQGPRPHWLDDRGCMYR*IQTLAR
Trigger: TCTAGCCAGAGTCTGAATCCATCTGTACATACACCC...TCTATCATCTAGCCAGTGTGGTCGAGGGCCCTGGAGGCACTGGGGTACCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp TCAGAGGTACCCCAGTGCCTCCAGGGCCCTCGACCACACTGGCTAGATGATAGAAACAATCTGTGCTTTTaGTTGCTTGAGGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SEVPQCLQGPRPHWLDDRNNLCF*LLEALQ
Trigger: CTGCAGAGCCTCAAGCAACCAAAAGCACAGATTGTT...TCTATCATCTAGCCAGTGTGGTCGAGGGCCCTGGAGGCACTGGGGTACCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp ACAGTCCTATTGCACAGCACACCACCAGCTTCTAGGACTGTCCAGCTGCAGTCCTGGTCTTGGCTTTCTTaGGCTCCGCTTTCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: TVLLHSTPPASRTVQLQSWSWLS*APLSSC
Trigger: GCAAGAAGAAAGCGGAGCCCAAGAAAGCCAAGACCA...GGACTGCAGCTGGACAGTCCTAGAAGCTGGTGGTGTGCTGTGCAATAGGACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp ACAGTCCTATTGCACAGCACACCACCAGCTTCTAGGACTGTCCAGCTGCAGTCCTCATTCTCCTTGTTGTaGAAGGCGTGGCTGGAACTG +
Preference number: 4 (lower is better)
Translates to: TVLLHSTPPASRTVQLQSSFSLL*KAWLEL
Trigger: CAGTTCCAGCCACGCCTTCCACAACAAGGAGAATGA...GGACTGCAGCTGGACAGTCCTAGAAGCTGGTGGTGTGCTGTGCAATAGGACTGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTAGAGGTTCTGTATGGCTaGTGGGAGAAGGTGGTGCTA +
Preference number: 4 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLEVLYG*WEKVVL
Trigger: TAGCACCACCTTCTCCCATCAGCCATACAGAACCTC...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp TCTAGGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCAACTCGATAGCAGCCTaGCTGCTAGGGGTGTTTACA +
Preference number: 4 (lower is better)
Translates to: SRTVQLQSKAVLVTRSEANSIAA*LLGVFT
Trigger: TGTAAACACCCCTAGCAGTCAGGCTGCTATCGAGTT...GGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCCTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp ACAGTCCTATTGCACAGCACACCACCAGCTTCTAGGACTGTCCAGCTGCAGTCCTGCTGCTGGCAGATTTaGGGGAAATTTGAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: TVLLHSTPPASRTVQLQSCCWQI*GKFEFW
Trigger: CCAGAACTCAAATTTCCCTCAAATCTGCCAGCAGCA...GGACTGCAGCTGGACAGTCCTAGAAGCTGGTGGTGTGCTGTGCAATAGGACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp TGTTCTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAGGAGGGGTCTGTGTCTaGCTTCCTCCTTGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: CSEEHTGLCVGQHGLKWAGGVCV*LPPCSG
Trigger: GCCTGAGCAAGGAGGAAGTCAGACACAGACCCCTCC...TGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp TCTAGGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCGTTCCATGGTCTCAATaGTGCTCTTTGGCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: SRTVQLQSKAVLVTRSEAVPWSQ*CSLAAH
Trigger: ATGGGCAGCCAAAGAGCATCATTGAGACCATGGAAC...GGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCCTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp TCTAGGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCGTGGACTCTCATGACTaGTCTGGCTGCCTTTCATGT +
Preference number: 4 (lower is better)
Translates to: SRTVQLQSKAVLVTRSEAVDSHD*SGCLSC
Trigger: ACATGAAAGGCAGCCAGAGCAGTCATGAGAGTCCAC...GGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCCTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp ACAGTCCTATTGCACAGCACACCACCAGCTTCTAGGACTGTCCAGCTGCAGTCCGGTCCTTGGTTCACTTaGACTTGGTACATTTGTGCC +
Preference number: 4 (lower is better)
Translates to: TVLLHSTPPASRTVQLQSGPWFT*TWYICA
Trigger: GGCACAAATGTACCAAGTGCAAGTGAACCAAGGACC...GGACTGCAGCTGGACAGTCCTAGAAGCTGGTGGTGTGCTGTGCAATAGGACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp ACAGTCCTATTGCACAGCACACCACCAGCTTCTAGGACTGTCCAGCTGCAGTCCGACGGTTGGTGCATATaGCACACTTGCCCAAGATAT +
Preference number: 4 (lower is better)
Translates to: TVLLHSTPPASRTVQLQSDGWCI*HTCPRY
Trigger: ATATCTTGGGCAAGTGTGGCATATGCACCAACCGTC...GGACTGCAGCTGGACAGTCCTAGAAGCTGGTGGTGTGCTGTGCAATAGGACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp TCAGAGGTACCCCAGTGCCTCCAGGGCCCTCGACCACACTGGCTAGATGATAGACCGTGGTTTCTTTCTTaGCTTTCCTCGAAGATATTG +
Preference number: 4 (lower is better)
Translates to: SEVPQCLQGPRPHWLDDRPWFLS*LSSKIL
Trigger: CAATATCTTCGAGGAAAGCCAAGAAAGAAACCACGG...TCTATCATCTAGCCAGTGTGGTCGAGGGCCCTGGAGGCACTGGGGTACCTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp ACAGTCCTATTGCACAGCACACCACCAGCTTCTAGGACTGTCCAGCTGCAGTCCCGGCTGCTTTTACCGTaGTTTCTTTCTTGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: TVLLHSTPPASRTVQLQSRLLLP*FLSWLS
Trigger: GGAAAGCCAAGAAAGAAACCACGGTAAAAGCAGCCG...GGACTGCAGCTGGACAGTCCTAGAAGCTGGTGGTGTGCTGTGCAATAGGACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp TCAGAGGTACCCCAGTGCCTCCAGGGCCCTCGACCACACTGGCTAGATGATAGAACCTGGTACTATAGCTaGTTTACTGGCATTATCAGC +
Preference number: 4 (lower is better)
Translates to: SEVPQCLQGPRPHWLDDRTWYYS*FTGIIS
Trigger: GCTGATAATGCCAGTAAACCAGCTATAGTACCAGGT...TCTATCATCTAGCCAGTGTGGTCGAGGGCCCTGGAGGCACTGGGGTACCTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp TGTTCTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCACTCAGCTGGTGGGGCTaGAGACTCACCCTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: CSEEHTGLCVGQHGLKWALSWWG*RLTLAS
Trigger: AGAAGCCAGGGTGAGTCTCCAGCCCCACCAGCTGAG...TGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTAGCTGCCTCAGCTGGTaGGGCTGGAGACTCACCCTG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVQGRHSESFSCLSW*GWRLTL
Trigger: CAGGGTGAGTCTCCAGCCCCACCAGCTGAGGCAGCT...AAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACACACACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTAGGCACCACAGGTCTCTaGATTCTCACCCTGACAACA +
Preference number: 4 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLGTTGL*ILTLTT
Trigger: TGTTGTCAGGGTGAGAATCCAGAGACCTGTGGTGCC...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp CTCAACATCATGGTTTGGAAACCTTGTGGTTTTTGTTTTTGTGTGTGTGTGTGTCGGCTGCGGCTGAGGTaGCTGCGGCTGCTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: LNIMVWKPCGFCFCVCVCRLRLR*LRLLWP
Trigger: AGGCCACAGCAGCCGCAGCCACCTCAGCCGCAGCCG...ACACACACACACACAAAAACAAAAACCACAAGGTTTCCAAACCATGATGTTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTCTGTGGCTGTGGCTGTaGCTGAGGTGTCGTCTGCGG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVQGRHSESFLWLWL*LRCRLR
Trigger: CCGCAGACGACACCTCAGCCACAGCCACAGCCACAG...AAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACACACACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp TGTTCTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAACAGCAGCTGCATCCTaGCCTGACACCTCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: CSEEHTGLCVGQHGLKWATAAAS*PDTSGC
Trigger: GCAGCCTGAGGTGTCAGGCCAGGATGCAGCTGCTGT...TGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp CTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAAGCTGTAACTGGGTTCCTGTaGCCCTGTGGGCTCACGCTT +
Preference number: 4 (lower is better)
Translates to: LKNIQVCVWDNMDLSGQAVTGFL*PCGLTL
Trigger: AAGCGTGAGCCCACAGGGCCACAGGAACCCAGTTAC...AGCTTGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTAGAAATTGATCTGCGCTaGGGTAAGCGATGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLEIDLR*GKRWLR
Trigger: CCTCAACCATCGCTTACCTCAGCGCAGATCAATTTC...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp TCTAGGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCCTGAGAGTGGAGGACTaGGTGCAAGGATATATCCTT +
Preference number: 4 (lower is better)
Translates to: SRTVQLQSKAVLVTRSEALRVED*VQGYIL
Trigger: AAGGATATATCCTTGCACTCAGTCCTCCACTCTCAG...GGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCCTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp GTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTTAGTGACTTGACAGGGCCGGTCTaGGAGTGGAGGACTGAGTGC +
Preference number: 4 (lower is better)
Translates to: VCVCVCVCKADILKVFSDLTGPV*EWRTEC
Trigger: GCACTCAGTCCTCCACTCTCAGACCGGCCCTGTCAA...GTCACTAAAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTAGTTCCATGGTCTCAATaGTGCTCTTTGGCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLVPWSQ*CSLAAH
Trigger: ATGGGCAGCCAAAGAGCATCATTGAGACCATGGAAC...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTACAGAGTGACTTGAGCTaGAACTGCTTCAGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLQSDLS*NCFRCC
Trigger: ACAGCACCTGAAGCAGTTTCAGCTCAAGTCACTCTG...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp CTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAAGCTGAGAGTTACCGGGCATaGTATGCTGTGGCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: LKNIQVCVWDNMDLSGQAESYRA*YAVAVA
Trigger: AGCCACAGCCACAGCATATCATGCCCGGTAACTCTC...AGCTTGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp TCTAGGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCACTTTGGTTGTGGCATaGACCTCACACTTTGCACAC +
Preference number: 4 (lower is better)
Translates to: SRTVQLQSKAVLVTRSEATLVVA*TSHFAH
Trigger: GTGTGCAAAGTGTGAGGTTCATGCCACAACCAAAGT...GGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCCTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTAGATGGGAGAAGGTGGTaGTATCAGGAATGGACTCAG +
Preference number: 4 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLDGRRW*YQEWTQ
Trigger: CTGAGTCCATTCCTGATAGCACCACCTTCTCCCATC...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp TCAGAGGTACCCCAGTGCCTCCAGGGCCCTCGACCACACTGGCTAGATGATAGACTTTTGTTGGTGTTCTaGTTTCTGAAAAGGACAGGT +
Preference number: 4 (lower is better)
Translates to: SEVPQCLQGPRPHWLDDRLLLVF*FLKRTG
Trigger: ACCTGTCCTTTTCAGAAAGCAGAACACCAACAAAAG...TCTATCATCTAGCCAGTGTGGTCGAGGGCCCTGGAGGCACTGGGGTACCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp AGCACACCTTGCAGGAACCTGATGTGGACTCAACATCATGGTTTGGAAACCTTGTATCCAGCCAGGTGCTaGCTGTACAGAGCCTTGCGT +
Preference number: 4 (lower is better)
Translates to: STPCRNLMWTQHHGLETLYPARC*LYRALR
Trigger: ACGCAAGGCTCTGTACAGGCAGCACCTGGCTGGATA...CAAGGTTTCCAAACCATGATGTTGAGTCCACATCAGGTTCCTGCAAGGTGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp ACAGTCCTATTGCACAGCACACCACCAGCTTCTAGGACTGTCCAGCTGCAGTCCGGGAAGATTGCCACTTaGTGTCTCCATTTACTTCTG +
Preference number: 4 (lower is better)
Translates to: TVLLHSTPPASRTVQLQSGKIAT*CLHLLL
Trigger: CAGAAGTAAATGGAGACACCAAGTGGCAATCTTCCC...GGACTGCAGCTGGACAGTCCTAGAAGCTGGTGGTGTGCTGTGCAATAGGACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTACCCTCTGTCTTCATGTaGACTCTCATGACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLPSVFM*TLMTAL
Trigger: CAGAGCAGTCATGAGAGTCCACATGAAGACAGAGGG...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp CAGCTCAGGGCTTCCTATTTTACACTTTTTACTCTGCTGAATGCCAACTCTCCACTCAGCTGGTGGGGCTaGAGACTCACCCTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: QLRASYFTLFTLLNANSPLSWWG*RLTLAS
Trigger: AGAAGCCAGGGTGAGTCTCCAGCCCCACCAGCTGAG...TGGAGAGTTGGCATTCAGCAGAGTAAAAAGTGTAAAATAGGAAGCCCTGAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp TCTAGGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCACCCAAACAGCAGTCTaGGGCTTGGTGTTCAAATTC +
Preference number: 4 (lower is better)
Translates to: SRTVQLQSKAVLVTRSEATQTAV*GLVFKF
Trigger: GAATTTGAACACCAAGCCCCAGACTGCTGTTTGGGT...GGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCCTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp AGCACACCTTGCAGGAACCTGATGTGGACTCAACATCATGGTTTGGAAACCTTGGATATGCTGTGGCTGTaGCTGTGGCTGAGGTGTCGT +
Preference number: 4 (lower is better)
Translates to: STPCRNLMWTQHHGLETLDMLWL*LWLRCR
Trigger: ACGACACCTCAGCCACAGCCACAGCCACAGCATATC...CAAGGTTTCCAAACCATGATGTTGAGTCCACATCAGGTTCCTGCAAGGTGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp TGTTCTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAGGGCATGATATGCTGTaGCTGTGGCTGTGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: CSEEHTGLCVGQHGLKWAGHDML*LWLWLR
Trigger: CCTCAGCCACAGCCACAGCCACAGCATATCATGCCC...TGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp AGCACACCTTGCAGGAACCTGATGTGGACTCAACATCATGGTTTGGAAACCTTGCAAGTGAGATCCTGGTaGGGTGATTCCGGTCGGGAT +
Preference number: 4 (lower is better)
Translates to: STPCRNLMWTQHHGLETLQVRSW*GDSGRD
Trigger: ATCCCGACCGGAATCACCCCACCAGGATCTCACTTG...CAAGGTTTCCAAACCATGATGTTGAGTCCACATCAGGTTCCTGCAAGGTGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp CTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAAGCTCAAGTGAGATCCTGGTaGGGTGATTCCGGTCGGGAT +
Preference number: 4 (lower is better)
Translates to: LKNIQVCVWDNMDLSGQAQVRSW*GDSGRD
Trigger: ATCCCGACCGGAATCACCCCACCAGGATCTCACTTG...AGCTTGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp TCTAGGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCCCTTTTCAGCCATTTTaGCTTCCCAGAGAGCCAAAC +
Preference number: 4 (lower is better)
Translates to: SRTVQLQSKAVLVTRSEAPFQPF*LPREPN
Trigger: GTTTGGCTCTCTGGGAAGCCAAAATGGCTGAAAAGG...GGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp CTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAAGCTGAAAGCATCTGCACCTaGACTTTCCTGGGTGGTCGA +
Preference number: 4 (lower is better)
Translates to: LKNIQVCVWDNMDLSGQAESICT*TFLGGR
Trigger: TCGACCACCCAGGAAAGTTCAGGTGCAGATGCTTTC...AGCTTGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp AGCACACCTTGCAGGAACCTGATGTGGACTCAACATCATGGTTTGGAAACCTTGGAAAGCATCTGCACCTaGACTTTCCTGGGTGGTCGA +
Preference number: 4 (lower is better)
Translates to: STPCRNLMWTQHHGLETLESICT*TFLGGR
Trigger: TCGACCACCCAGGAAAGTTCAGGTGCAGATGCTTTC...CAAGGTTTCCAAACCATGATGTTGAGTCCACATCAGGTTCCTGCAAGGTGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp TCTAGGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCCGTGTTTCTGTGACTTaGGAGTCAGAGCCTTATAGT +
Preference number: 4 (lower is better)
Translates to: SRTVQLQSKAVLVTRSEARVSVT*ESEPYS
Trigger: ACTATAAGGCTCTGACTCTCAAGTCACAGAAACACG...GGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCCTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp TGTTCTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAACATGCAGTGACTCCTaGGAATGGCCGGCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: CSEEHTGLCVGQHGLKWATCSDS*EWPAFL
Trigger: AAGGAAGGCCGGCCATTCTCAGGAGTCACTGCATGT...TGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp GTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTTAGTGACGAGATCCTGGTGGGGTaGTTCCGGTCGGGATCGTTT +
Preference number: 4 (lower is better)
Translates to: VCVCVCVCKADILKVFSDEILVG*FRSGSF
Trigger: AAACGATCCCGACCGGAATCACCCCACCAGGATCTC...GTCACTAAAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTGGCCTTAGTCACCATTaGAGCTGGCTCTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVQGRHSESFGLSHH*SWLWRQ
Trigger: CTGCCTCCAGAGCCAGCTGCAATGGTGACTAAGGCC...AAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACACACACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp CTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAAGCTCTCTGTAACTGCTGCTaGTGCTGCTGCTGGCAGATT +
Preference number: 4 (lower is better)
Translates to: LKNIQVCVWDNMDLSGQALCNCC*CCCWQI
Trigger: AATCTGCCAGCAGCAGCAGCAGCAGCAGTTACAGAG...AGCTTGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp TCAGAGGTACCCCAGTGCCTCCAGGGCCCTCGACCACACTGGCTAGATGATAGAATTTCCTTGGTTTCTTaGTTCTGGCAAACTTACATC +
Preference number: 4 (lower is better)
Translates to: SEVPQCLQGPRPHWLDDRISLVS*FWQTYI
Trigger: GATGTAAGTTTGCCAGAAGCAAGAAACCAAGGAAAT...TCTATCATCTAGCCAGTGTGGTCGAGGGCCCTGGAGGCACTGGGGTACCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp CTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAAGCTGCTCCGCTTTCTTCTTaGAACTCTTGGGCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: LKNIQVCVWDNMDLSGQAAPLSS*NSWAAL
Trigger: GAGAGCTGCCCAAGAGTTGCAAGAAGAAAGCGGAGC...AGCTTGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp GTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTTAGTGACGGAATGGACTCAGTCTaGTGCCCTCAGCATGGGTGG +
Preference number: 4 (lower is better)
Translates to: VCVCVCVCKADILKVFSDGMDSV*CPQHGW
Trigger: CCACCCATGCTGAGGGCACCAGACTGAGTCCATTCC...GTCACTAAAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp ACAGTCCTATTGCACAGCACACCACCAGCTTCTAGGACTGTCCAGCTGCAGTCCAATATCTTGTTTGGATaGAGCCCAGAGAGAGATGGT +
Preference number: 4 (lower is better)
Translates to: TVLLHSTPPASRTVQLQSNILFG*SPERDG
Trigger: ACCATCTCTCTCTGGGCTCCATCCAAACAAGATATT...GGACTGCAGCTGGACAGTCCTAGAAGCTGGTGGTGTGCTGTGCAATAGGACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTAGTGTTCTCCTCAGAATaGGCAGAAACTGTAGCACCA +
Preference number: 4 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLVFSSE*AETVAP
Trigger: TGGTGCTACAGTTTCTGCCCATTCTGAGGAGAACAC...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp ACAGTCCTATTGCACAGCACACCACCAGCTTCTAGGACTGTCCAGCTGCAGTCCTGCCCCATCAGGTATTaGCTATGTTCTTGTAAACCT +
Preference number: 4 (lower is better)
Translates to: TVLLHSTPPASRTVQLQSCPIRY*LCSCKP
Trigger: AGGTTTACAAGAACATAGCCAATACCTGATGGGGCA...GGACTGCAGCTGGACAGTCCTAGAAGCTGGTGGTGTGCTGTGCAATAGGACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp CTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAAGCTTTGTGCCTTCTGCTCTaGCTGGGCTGTTTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: LKNIQVCVWDNMDLSGQALCLLL*LGCFLE
Trigger: CTCCAGAAAACAGCCCAGCCAGAGCAGAAGGCACAA...AGCTTGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp TCTAGGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCAACAATCTGTGCTTTTaGTTGCTTGAGGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SRTVQLQSKAVLVTRSEANNLCF*LLEALQ
Trigger: CTGCAGAGCCTCAAGCAACCAAAAGCACAGATTGTT...GGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTATTCGAGCTGCTTTCTTaGTCTTGGCTTTCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLFELLS*SWLSWA
Trigger: AGCCCAAGAAAGCCAAGACCAAGAAAGCAGCTCGAA...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp GTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTTAGTGACGGGCATGATATGCTGTaGCTGTGGCTGTGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: VCVCVCVCKADILKVFSDGHDML*LWLWLR
Trigger: CCTCAGCCACAGCCACAGCCACAGCATATCATGCCC...GTCACTAAAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTATATCCATCTTGGGGGTaGGGTAAGGAGAAAACGTTG +
Preference number: 4 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLYPSWG*GKEKTL
Trigger: CAACGTTTTCTCCTTACCCCACCCCCAAGATGGATA...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp TCTAGGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCAATGACTATCCATCTTaGGGGTGGGGTAAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: SRTVQLQSKAVLVTRSEANDYPS*GWGKEK
Trigger: TTTCTCCTTACCCCACCCCCAAGATGGATAGTCATT...GGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTACGGGATCGTTTACTTTaGTTGTGGCATGAACCTCAC +
Preference number: 4 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLRDRLL*LWHEPH
Trigger: GTGAGGTTCATGCCACAACCAAAGTAAACGATCCCG...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTACCTTTTCAGCCATTTTaGCTTCCCAGAGAGCCAAAC +
Preference number: 4 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLPFQPF*LPREPN
Trigger: GTTTGGCTCTCTGGGAAGCCAAAATGGCTGAAAAGG...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp TCCAGTATTTCTTCAGTACATCATACGTCAGCACCAGATGATCCTGCAACTGCTGTAACTGGGTTCCTGTaGCCCTGTGGGCTCACGCTT +
Preference number: 4 (lower is better)
Translates to: SSISSVHHTSAPDDPATAVTGFL*PCGLTL
Trigger: AAGCGTGAGCCCACAGGGCCACAGGAACCCAGTTAC...AGCAGTTGCAGGATCATCTGGTGCTGACGTATGATGTACTGAAGAAATACTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp TGTTCTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCATCATGTGGACTCTCATaGCTGCTCTGGCTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: CSEEHTGLCVGQHGLKWASCGLS*LLWLPF
Trigger: GAAAGGCAGCCAGAGCAGTCATGAGAGTCCACATGA...TGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp CTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAAGCTAGGCAGCTGCAAGCTTaGGGTCTGGGAGAAATTGAT +
Preference number: 4 (lower is better)
Translates to: LKNIQVCVWDNMDLSGQARQLQA*GLGEID
Trigger: ATCAATTTCTCCCAGACCTCAAGCTTGCAGCTGCCT...AGCTTGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp CAGCTCAGGGCTTCCTATTTTACACTTTTTACTCTGCTGAATGCCAACTCTCCAGGATGCTGGTGTTTGTaGTGCCTGCGTCTGAGGAGT +
Preference number: 4 (lower is better)
Translates to: QLRASYFTLFTLLNANSPGCWCL*CLRLRS
Trigger: ACTCCTCAGACGCAGGCATCACAAACACCAGCATCC...TGGAGAGTTGGCATTCAGCAGAGTAAAAAGTGTAAAATAGGAAGCCCTGAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTATTTCACGTGTTTCTGTaGCTTGAGAGTCAGAGCCTT +
Preference number: 4 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLFHVFL*LESQSL
Trigger: AAGGCTCTGACTCTCAAGTCACAGAAACACGTGAAA...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTACATGCAGTGACTCCTaGGAATGGCCGGCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVQGRHSESFTCSDS*EWPAFL
Trigger: AAGGAAGGCCGGCCATTCTCAGGAGTCACTGCATGT...AAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACACACACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp CTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAAGCTTGGAGGCAGCTCCCATaGAATGACTATCCATCTTGG +
Preference number: 4 (lower is better)
Translates to: LKNIQVCVWDNMDLSGQAWRQLP*NDYPSW
Trigger: CCAAGATGGATAGTCATTTCATGGGAGCTGCCTCCA...AGCTTGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp TGTTCTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCACCCTGGAAGCACTCTTaGGAGCCCATTGGCTATGTT +
Preference number: 4 (lower is better)
Translates to: CSEEHTGLCVGQHGLKWAPWKHS*EPIGYV
Trigger: AACATAGCCAATGGGCTCTCAAGAGTGCTTCCAGGG...TGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp TCCAGTATTTCTTCAGTACATCATACGTCAGCACCAGATGATCCTGCAACTGCTATGGACTCAGTCTGGTaGCCTCAGCATGGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: SSISSVHHTSAPDDPATAMDSVW*PQHGWF
Trigger: GAACCACCCATGCTGAGGGCACCAGACTGAGTCCAT...AGCAGTTGCAGGATCATCTGGTGCTGACGTATGATGTACTGAAGAAATACTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp TCTAGGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCTTAAAAGAGTTCGGTTaGTTCGGTTGGGGTAGTCAT +
Preference number: 4 (lower is better)
Translates to: SRTVQLQSKAVLVTRSEALKEFG*FGWGSH
Trigger: ATGACTACCCCAACCGAAGCAACCGAACTCTTTTAA...GGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp CAGCTCAGGGCTTCCTATTTTACACTTTTTACTCTGCTGAATGCCAACTCTCCATCCTTCGGAATCTCTTaGTCCCTGTGCCCCATCAGG +
Preference number: 4 (lower is better)
Translates to: QLRASYFTLFTLLNANSPSFGIS*SLCPIR
Trigger: CCTGATGGGGCACAGGGAGCAAGAGATTCCGAAGGA...TGGAGAGTTGGCATTCAGCAGAGTAAAAAGTGTAAAATAGGAAGCCCTGAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp TCTAGGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCGCAAGGATATATCCTTaGGTTTTGTCTGATGGAGTG +
Preference number: 4 (lower is better)
Translates to: SRTVQLQSKAVLVTRSEAARIYP*VLSDGV
Trigger: CACTCCATCAGACAAAACGCAAGGATATATCCTTGC...GGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp CTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAAGCTCTCAGGCACAGGGAGTaGCTTTGCTTCATTATGCAC +
Preference number: 4 (lower is better)
Translates to: LKNIQVCVWDNMDLSGQALRHRE*LCFIMH
Trigger: GTGCATAATGAAGCAAAGGCACTCCCTGTGCCTGAG...AGCTTGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp ACAGTCCTATTGCACAGCACACCACCAGCTTCTAGGACTGTCCAGCTGCAGTCCTGCATCCTTCACATTTaGCATTCTGACTTTGTTCAC +
Preference number: 4 (lower is better)
Translates to: TVLLHSTPPASRTVQLQSCILHI*HSDFVH
Trigger: GTGAACAAAGTCAGAATGGCAAATGTGAAGGATGCA...GGACTGCAGCTGGACAGTCCTAGAAGCTGGTGGTGTGCTGTGCAATAGGACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp TCCAGTATTTCTTCAGTACATCATACGTCAGCACCAGATGATCCTGCAACTGCTTTACCGGGCATGATATaGTGTGGCTGTGGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: SSISSVHHTSAPDDPATALPGMI*CGCGCG
Trigger: GCCACAGCCACAGCCACAGCATATCATGCCCGGTAA...AGCAGTTGCAGGATCATCTGGTGCTGACGTATGATGTACTGAAGAAATACTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp CTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAAGCTGCTGCTTCTCCTGACTaGTGCCAGTCAGACTGTATA +
Preference number: 4 (lower is better)
Translates to: LKNIQVCVWDNMDLSGQAAASPD*CQSDCI
Trigger: TATACAGTCTGACTGGCAGCAGTCAGGAGAAGCAGC...AGCTTGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTAGGGAAGATTGCCACTTaGTGTCTCCATTTACTTCTG +
Preference number: 4 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLGKIAT*CLHLLL
Trigger: CAGAAGTAAATGGAGACACCAAGTGGCAATCTTCCC...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTACCATGCTTCCTTGGATaGTTTTGTTTTCTGCACGAG +
Preference number: 4 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLPCFLG*FCFLHE
Trigger: CTCGTGCAGAAAACAAAACCATCCAAGGAAGCATGG...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTAGGGTGTATGTACAGATaGATTCAGACTCTGGCTAGA +
Preference number: 4 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLGCMYR*IQTLAR
Trigger: TCTAGCCAGAGTCTGAATCCATCTGTACATACACCC...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp CAGCTCAGGGCTTCCTATTTTACACTTTTTACTCTGCTGAATGCCAACTCTCCAGATATGCTGTGGCTGTaGCTGTGGCTGAGGTGTCGT +
Preference number: 4 (lower is better)
Translates to: QLRASYFTLFTLLNANSPDMLWL*LWLRCR
Trigger: ACGACACCTCAGCCACAGCCACAGCCACAGCATATC...TGGAGAGTTGGCATTCAGCAGAGTAAAAAGTGTAAAATAGGAAGCCCTGAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp AGCACACCTTGCAGGAACCTGATGTGGACTCAACATCATGGTTTGGAAACCTTGTCATTCTCCTTGTTGTaGAAGGCGTGGCTGGAACTG +
Preference number: 4 (lower is better)
Translates to: STPCRNLMWTQHHGLETLSFSLL*KAWLEL
Trigger: CAGTTCCAGCCACGCCTTCCACAACAAGGAGAATGA...CAAGGTTTCCAAACCATGATGTTGAGTCCACATCAGGTTCCTGCAAGGTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp TCCAGTATTTCTTCAGTACATCATACGTCAGCACCAGATGATCCTGCAACTGCTGTACAAGTGAGATCCTaGTGGGGTGATTCCGGTCGG +
Preference number: 4 (lower is better)
Translates to: SSISSVHHTSAPDDPATAVQVRS*WGDSGR
Trigger: CCGACCGGAATCACCCCACCAGGATCTCACTTGTAC...AGCAGTTGCAGGATCATCTGGTGCTGACGTATGATGTACTGAAGAAATACTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp TCCAGTATTTCTTCAGTACATCATACGTCAGCACCAGATGATCCTGCAACTGCTTCATGTGGACTCTCATaGCTGCTCTGGCTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: SSISSVHHTSAPDDPATASCGLS*LLWLPF
Trigger: GAAAGGCAGCCAGAGCAGTCATGAGAGTCCACATGA...AGCAGTTGCAGGATCATCTGGTGCTGACGTATGATGTACTGAAGAAATACTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp TGTTCTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAAGGCAGCTGCAAGCTTaGGGTCTGGGAGAAATTGAT +
Preference number: 4 (lower is better)
Translates to: CSEEHTGLCVGQHGLKWARQLQA*GLGEID
Trigger: ATCAATTTCTCCCAGACCTCAAGCTTGCAGCTGCCT...TGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp CTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAAGCTTGGTGTTCTGCTTTCTaGAAAGGACAGGTACCTGGT +
Preference number: 4 (lower is better)
Translates to: LKNIQVCVWDNMDLSGQAWCSAF*KGQVPG
Trigger: ACCAGGTACCTGTCCTTTTCAGAAAGCAGAACACCA...AGCTTGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTATCACATTTGCCATTCTaGCTTTGTTCACCAGGAGTA +
Preference number: 4 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLSHLPF*LCSPGV
Trigger: TACTCCTGGTGAACAAAGTCAGAATGGCAAATGTGA...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp TGTTCTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAATGGGTGGTAAGTTCTaGTTGGTGAGATGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: CSEEHTGLCVGQHGLKWAMGGKF*LVRWSW
Trigger: CCAGGACCATCTCACCAATCAGAACTTACCACCCAT...TGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp CAGCTCAGGGCTTCCTATTTTACACTTTTTACTCTGCTGAATGCCAACTCTCCAGCAGCTCCCATGAAATaGCTATCCATCTTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: QLRASYFTLFTLLNANSPAAPMK*LSILGV
Trigger: CACCCCCAAGATGGATAGTCATTTCATGGGAGCTGC...TGGAGAGTTGGCATTCAGCAGAGTAAAAAGTGTAAAATAGGAAGCCCTGAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp GTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTTAGTGACCTCTGTAACTGCTGCTaGTGCTGCTGCTGGCAGATT +
Preference number: 4 (lower is better)
Translates to: VCVCVCVCKADILKVFSDLCNCC*CCCWQI
Trigger: AATCTGCCAGCAGCAGCAGCAGCAGCAGTTACAGAG...GTCACTAAAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp TCTAGGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCCTCTTTGCTTATCATTaGTACCTTGGAGATGAGAGA +
Preference number: 4 (lower is better)
Translates to: SRTVQLQSKAVLVTRSEALFAYH*YLGDER
Trigger: TCTCTCATCTCCAAGGTAGCAATGATAAGCAAAGAG...GGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCCTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp TGTTCTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAATGATGCTCTTTGGCTaGCCATTGTCACGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: CSEEHTGLCVGQHGLKWAMMLFG*PLSRLG
Trigger: TCCAAGCCGTGACAATGGGCAGCCAAAGAGCATCAT...TGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTTGGTGCTATCAGGAATaGACTCAGTCTGGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVQGRHSESFWCYQE*TQSGAL
Trigger: GAGGGCACCAGACTGAGTCCATTCCTGATAGCACCA...AAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACACACACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp GTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTTAGTGACTTGTGCCTTCTGCTCTaGCTGGGCTGTTTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: VCVCVCVCKADILKVFSDLCLLL*LGCFLE
Trigger: CTCCAGAAAACAGCCCAGCCAGAGCAGAAGGCACAA...GTCACTAAAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTAGGGAAATTTGAGTTCTaGGATGCTGGTGTTTGTGAT +
Preference number: 4 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLGKFEF*DAGVCD
Trigger: ATCACAAACACCAGCATCCCAGAACTCAAATTTCCC...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp GTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTTAGTGACGGCACCACAGGTCTCTaGATTCTCACCCTGACAACA +
Preference number: 4 (lower is better)
Translates to: VCVCVCVCKADILKVFSDGTTGL*ILTLTT
Trigger: TGTTGTCAGGGTGAGAATCCAGAGACCTGTGGTGCC...GTCACTAAAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp CTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAAGCTTTCGAGCTGCTTTCTTaGTCTTGGCTTTCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: LKNIQVCVWDNMDLSGQAFELLS*SWLSWA
Trigger: AGCCCAAGAAAGCCAAGACCAAGAAAGCAGCTCGAA...AGCTTGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTAACTCGATAGCAGCCTaGCTGCTAGGGGTGTTTACA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVQGRHSESFNSIAA*LLGVFT
Trigger: TGTAAACACCCCTAGCAGTCAGGCTGCTATCGAGTT...AAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACACACACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp TCCAGTATTTCTTCAGTACATCATACGTCAGCACCAGATGATCCTGCAACTGCTGAAATTGATCTGCGCTaGGGTAAGCGATGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: SSISSVHHTSAPDDPATAEIDLR*GKRWLR
Trigger: CCTCAACCATCGCTTACCTCAGCGCAGATCAATTTC...AGCAGTTGCAGGATCATCTGGTGCTGACGTATGATGTACTGAAGAAATACTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp CTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAAGCTGGTTTCCTTTTGCTTTaGATACTGTTCAGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: LKNIQVCVWDNMDLSGQAGFLLL*ILFRAA
Trigger: GGCAGCTCTGAACAGTATTCAAAGCAAAAGGAAACC...AGCTTGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp AGCACACCTTGCAGGAACCTGATGTGGACTCAACATCATGGTTTGGAAACCTTGAAAGCTTTCTGGAACTaGAGATGTTGGTCCCCCATA +
Preference number: 4 (lower is better)
Translates to: STPCRNLMWTQHHGLETLKAFWN*RCWSPI
Trigger: TATGGGGGACCAACATCTTCAGTTCCAGAAAGCTTT...CAAGGTTTCCAAACCATGATGTTGAGTCCACATCAGGTTCCTGCAAGGTGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp GTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTTAGTGACCATGTTCTGCAGGTTTaGGGTCTTACTTCCTACGGG +
Preference number: 4 (lower is better)
Translates to: VCVCVCVCKADILKVFSDHVLQV*GLTSYG
Trigger: CCCGTAGGAAGTAAGACCTCAAACCTGCAGAACATG...GTCACTAAAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTCATGTTCTGCAGGTTTaGGGTCTTACTTCCTACGGG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVQGRHSESFHVLQV*GLTSYG
Trigger: CCCGTAGGAAGTAAGACCTCAAACCTGCAGAACATG...AAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACACACACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp TCCAGTATTTCTTCAGTACATCATACGTCAGCACCAGATGATCCTGCAACTGCTCAGAGTGACTTGAGCTaGAACTGCTTCAGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: SSISSVHHTSAPDDPATAQSDLS*NCFRCC
Trigger: ACAGCACCTGAAGCAGTTTCAGCTCAAGTCACTCTG...AGCAGTTGCAGGATCATCTGGTGCTGACGTATGATGTACTGAAGAAATACTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp GTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTTAGTGACATGGGTGGTAAGTTCTaGTTGGTGAGATGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: VCVCVCVCKADILKVFSDMGGKF*LVRWSW
Trigger: CCAGGACCATCTCACCAATCAGAACTTACCACCCAT...GTCACTAAAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp GTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTTAGTGACTGGAGGCAGCTCCCATaGAATGACTATCCATCTTGG +
Preference number: 4 (lower is better)
Translates to: VCVCVCVCKADILKVFSDWRQLP*NDYPSW
Trigger: CCAAGATGGATAGTCATTTCATGGGAGCTGCCTCCA...GTCACTAAAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp AGCACACCTTGCAGGAACCTGATGTGGACTCAACATCATGGTTTGGAAACCTTGATAAGAATTGACCCATaGGTTGGAGCTATAGCCACC +
Preference number: 4 (lower is better)
Translates to: STPCRNLMWTQHHGLETLIRIDP*VGAIAT
Trigger: GGTGGCTATAGCTCCAACTCATGGGTCAATTCTTAT...CAAGGTTTCCAAACCATGATGTTGAGTCCACATCAGGTTCCTGCAAGGTGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTGATGGGAGAAGGTGGTaGTATCAGGAATGGACTCAG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVQGRHSESFDGRRW*YQEWTQ
Trigger: CTGAGTCCATTCCTGATAGCACCACCTTCTCCCATC...AAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACACACACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTATCTCTTGCTCCCTGTaGCCCATCAGGTATTGGCTA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVQGRHSESFISCSL*PIRYWL
Trigger: TAGCCAATACCTGATGGGGCACAGGGAGCAAGAGAT...AAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACACACACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp AGCACACCTTGCAGGAACCTGATGTGGACTCAACATCATGGTTTGGAAACCTTGTTTTGTCTGATGGAGTaGTTCATGCAAATTCGGGGC +
Preference number: 4 (lower is better)
Translates to: STPCRNLMWTQHHGLETLFCLME*FMQIRG
Trigger: GCCCCGAATTTGCATGAAGCACTCCATCAGACAAAA...CAAGGTTTCCAAACCATGATGTTGAGTCCACATCAGGTTCCTGCAAGGTGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp TCCAGTATTTCTTCAGTACATCATACGTCAGCACCAGATGATCCTGCAACTGCTCTCAGGCACAGGGAGTaGCTTTGCTTCATTATGCAC +
Preference number: 4 (lower is better)
Translates to: SSISSVHHTSAPDDPATALRHRE*LCFIMH
Trigger: GTGCATAATGAAGCAAAGGCACTCCCTGTGCCTGAG...AGCAGTTGCAGGATCATCTGGTGCTGACGTATGATGTACTGAAGAAATACTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp CAGCTCAGGGCTTCCTATTTTACACTTTTTACTCTGCTGAATGCCAACTCTCCAATGATGCTCTTTGGCTaGCCATTGTCACGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: QLRASYFTLFTLLNANSPMMLFG*PLSRLG
Trigger: TCCAAGCCGTGACAATGGGCAGCCAAAGAGCATCAT...TGGAGAGTTGGCATTCAGCAGAGTAAAAAGTGTAAAATAGGAAGCCCTGAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp TCTAGGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTTCCTTGGTTTCTTaGTTCTGGCAAACTTACATC +
Preference number: 4 (lower is better)
Translates to: SRTVQLQSKAVLVTRSEAISLVS*FWQTYI
Trigger: GATGTAAGTTTGCCAGAAGCAAGAAACCAAGGAAAT...GGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCCTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp TGTTCTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCACAATACTCAATTTCCTaGACAGCAGCTGCATCCTGG +
Preference number: 4 (lower is better)
Translates to: CSEEHTGLCVGQHGLKWAQYSIS*TAAASW
Trigger: CCAGGATGCAGCTGCTGTGCAGGAAATTGAGTATTG...TGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTAACGGGCTTCCATTCTaGAGTTTGACAGCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVQGRHSESFNGLPF*SLTARG
Trigger: ACCTCTGGCTGTCAAACTCCAGAATGGAAGCCCGTT...AAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACACACACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp CTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAAGCTCCATGCTTCCTTGGATaGTTTTGTTTTCTGCACGAG +
Preference number: 4 (lower is better)
Translates to: LKNIQVCVWDNMDLSGQAPCFLG*FCFLHE
Trigger: CTCGTGCAGAAAACAAAACCATCCAAGGAAGCATGG...AGCTTGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp TGTTCTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCACTGGGGATGCACTCCTaGTATAAAGCTTTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: CSEEHTGLCVGQHGLKWALGMHS*YKAFWN
Trigger: GTTCCAGAAAGCTTTATACCAGGAGTGCATCCCCAG...TGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp AGCACACCTTGCAGGAACCTGATGTGGACTCAACATCATGGTTTGGAAACCTTGTCTTCCACTTTAATCTaGCCAAAGCACGAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: STPCRNLMWTQHHGLETLSSTLI*PKHEPS
Trigger: AGAAGGCTCGTGCTTTGGCCAGATTAAAGTGGAAGA...CAAGGTTTCCAAACCATGATGTTGAGTCCACATCAGGTTCCTGCAAGGTGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp CTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAAGCTGTGAACGTCCTGATTTaGGGTCACATTATTCGGGAA +
Preference number: 4 (lower is better)
Translates to: LKNIQVCVWDNMDLSGQAVNVLI*GHIIRE
Trigger: TTCCCGAATAATGTGACCCCAAATCAGGACGTTCAC...AGCTTGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp CTCAACATCATGGTTTGGAAACCTTGTGGTTTTTGTTTTTGTGTGTGTGTGTGTGCTGGAGACTCACCCTaGCTTCTGTCCTTAAGCCCC +
Preference number: 4 (lower is better)
Translates to: LNIMVWKPCGFCFCVCVCAGDSP*LLSLSP
Trigger: GGGGCTTAAGGACAGAAGCCAGGGTGAGTCTCCAGC...ACACACACACACACAAAAACAAAAACCACAAGGTTTCCAAACCATGATGTTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp ACAGTCCTATTGCACAGCACACCACCAGCTTCTAGGACTGTCCAGCTGCAGTCCTTGGTTTCTTGCTTCTaGCAAACTTACATCCATTAT +
Preference number: 4 (lower is better)
Translates to: TVLLHSTPPASRTVQLQSLVSCF*QTYIHY
Trigger: ATAATGGATGTAAGTTTGCCAGAAGCAAGAAACCAA...GGACTGCAGCTGGACAGTCCTAGAAGCTGGTGGTGTGCTGTGCAATAGGACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTAAAGCTTCTTGTATATTaGAGCAATGACAGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLKLLVY*SNDSSQ
Trigger: CTGGCTACTGTCATTGCTCCAATATACAAGAAGCTT...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp CAGCTCAGGGCTTCCTATTTTACACTTTTTACTCTGCTGAATGCCAACTCTCCATGGTCTTGGCTTTCTTaGGCTCCGCTTTCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: QLRASYFTLFTLLNANSPWSWLS*APLSSC
Trigger: GCAAGAAGAAAGCGGAGCCCAAGAAAGCCAAGACCA...TGGAGAGTTGGCATTCAGCAGAGTAAAAAGTGTAAAATAGGAAGCCCTGAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTATTGGTGAGATGGTCCTaGTTTGGATATCTATGTAGA +
Preference number: 4 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLLVRWS*FGYLCR
Trigger: TCTACATAGATATCCAAACCAGGACCATCTCACCAA...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp TCTAGGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCCTGTATAATAGTTCTTaGGCAGAAGCAGTTCTATCA +
Preference number: 4 (lower is better)
Translates to: SRTVQLQSKAVLVTRSEALYNSS*AEAVLS
Trigger: TGATAGAACTGCTTCTGCCCAAGAACTATTATACAG...GGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCCTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR CAA 72 bp ACACTGTATTTAGGCCACAATGTAACAACAGTCCTATaGCACAGCACACCACCAGCTTCTAGGACTGTCCAG +
Preference number: 4 (lower is better)
Translates to: TLYLGHNVTTVL*HSTPPASRTVQ
Trigger: CTGGACAGTCCTAGAAGCTGGTGGTGTGCTGTGCAATAGGACTGTTGTTACATTGTGGCCTAAATACAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp TCCAGTATTTCTTCAGTACATCATACGTCAGCACCAGATGATCCTGCAACTGCTTGGTGTTCTGCTTTCTaGAAAGGACAGGTACCTGGT +
Preference number: 4 (lower is better)
Translates to: SSISSVHHTSAPDDPATAWCSAF*KGQVPG
Trigger: ACCAGGTACCTGTCCTTTTCAGAAAGCAGAACACCA...AGCAGTTGCAGGATCATCTGGTGCTGACGTATGATGTACTGAAGAAATACTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp TCCAGTATTTCTTCAGTACATCATACGTCAGCACCAGATGATCCTGCAACTGCTGCCTATGTCCAAAGCTaGCTTTTGTTGGTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: SSISSVHHTSAPDDPATAAYVQS*LLLVFC
Trigger: GCAGAACACCAACAAAAGTCAGCTTTGGACATAGGC...AGCAGTTGCAGGATCATCTGGTGCTGACGTATGATGTACTGAAGAAATACTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTGCCTATGTCCAAAGCTaGCTTTTGTTGGTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVQGRHSESFAYVQS*LLLVFC
Trigger: GCAGAACACCAACAAAAGTCAGCTTTGGACATAGGC...AAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACACACACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp GTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTTAGTGACGAGCCACAATCATTCTaGTGCTGTTCTGGAAGCATC +
Preference number: 4 (lower is better)
Translates to: VCVCVCVCKADILKVFSDEPQSF*CCSGSI
Trigger: GATGCTTCCAGAACAGCATCAGAATGATTGTGGCTC...GTCACTAAAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp TCCAGTATTTCTTCAGTACATCATACGTCAGCACCAGATGATCCTGCAACTGCTGAGCCACAATCATTCTaGTGCTGTTCTGGAAGCATC +
Preference number: 4 (lower is better)
Translates to: SSISSVHHTSAPDDPATAEPQSF*CCSGSI
Trigger: GATGCTTCCAGAACAGCATCAGAATGATTGTGGCTC...AGCAGTTGCAGGATCATCTGGTGCTGACGTATGATGTACTGAAGAAATACTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp TCCAGTATTTCTTCAGTACATCATACGTCAGCACCAGATGATCCTGCAACTGCTCTGAGAGTGGAGGACTaGGTGCAAGGATATATCCTT +
Preference number: 4 (lower is better)
Translates to: SSISSVHHTSAPDDPATALRVED*VQGYIL
Trigger: AAGGATATATCCTTGCACTCAGTCCTCCACTCTCAG...AGCAGTTGCAGGATCATCTGGTGCTGACGTATGATGTACTGAAGAAATACTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp CAGCTCAGGGCTTCCTATTTTACACTTTTTACTCTGCTGAATGCCAACTCTCCAGCAATAGGACATCCCTaGGAGCTCTTGCCTTCTTTA +
Preference number: 4 (lower is better)
Translates to: QLRASYFTLFTLLNANSPAIGHP*ELLPSL
Trigger: TAAAGAAGGCAAGAGCTCTCAGGGATGTCCTATTGC...TGGAGAGTTGGCATTCAGCAGAGTAAAAAGTGTAAAATAGGAAGCCCTGAGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp CTCAACATCATGGTTTGGAAACCTTGTGGTTTTTGTTTTTGTGTGTGTGTGTGTCCAAACGTCTGTTGGTaGAGGGTGTGGATGGGTGGT +
Preference number: 4 (lower is better)
Translates to: LNIMVWKPCGFCFCVCVCPNVCW*RVWMGG
Trigger: ACCACCCATCCACACCCTTCACCAACAGACGTTTGG...ACACACACACACACAAAAACAAAAACCACAAGGTTTCCAAACCATGATGTTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp AGCACACCTTGCAGGAACCTGATGTGGACTCAACATCATGGTTTGGAAACCTTGGTTGTGCTCACTATCTaGCCAATACTCAATTTCCTG +
Preference number: 4 (lower is better)
Translates to: STPCRNLMWTQHHGLETLVVLTI*PILNFL
Trigger: CAGGAAATTGAGTATTGGTCAGATAGTGAGCACAAC...CAAGGTTTCCAAACCATGATGTTGAGTCCACATCAGGTTCCTGCAAGGTGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp TCCAGTATTTCTTCAGTACATCATACGTCAGCACCAGATGATCCTGCAACTGCTACTTTGGTTGTGGCATaGACCTCACACTTTGCACAC +
Preference number: 4 (lower is better)
Translates to: SSISSVHHTSAPDDPATATLVVA*TSHFAH
Trigger: GTGTGCAAAGTGTGAGGTTCATGCCACAACCAAAGT...AGCAGTTGCAGGATCATCTGGTGCTGACGTATGATGTACTGAAGAAATACTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp AGCACACCTTGCAGGAACCTGATGTGGACTCAACATCATGGTTTGGAAACCTTGAGTGAAAGCATATGGTaGTGTAGTCACGGTAGAATC +
Preference number: 4 (lower is better)
Translates to: STPCRNLMWTQHHGLETLSESIW*CSHGRI
Trigger: GATTCTACCGTGACTACATCACCATATGCTTTCACT...CAAGGTTTCCAAACCATGATGTTGAGTCCACATCAGGTTCCTGCAAGGTGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp TGTTCTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAGATGGTTTTGTTTTCTaGACGAGATGGGCCTATGTC +
Preference number: 4 (lower is better)
Translates to: CSEEHTGLCVGQHGLKWADGFVF*TRWAYV
Trigger: GACATAGGCCCATCTCGTGCAGAAAACAAAACCATC...TGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTACCATTGGTTTCCTTTTaGTTTGAATACTGTTCAGAG +
Preference number: 4 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLPLVSF*FEYCSE
Trigger: CTCTGAACAGTATTCAAAGCAAAAGGAAACCAATGG...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp CAGCTCAGGGCTTCCTATTTTACACTTTTTACTCTGCTGAATGCCAACTCTCCATACATTTGTGCCTTCTaGTCTGGCTGGGCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: QLRASYFTLFTLLNANSPYICAF*SGWAVF
Trigger: GAAAACAGCCCAGCCAGAGCAGAAGGCACAAATGTA...TGGAGAGTTGGCATTCAGCAGAGTAAAAAGTGTAAAATAGGAAGCCCTGAGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp GTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTTAGTGACGGTCCTTGGTTCACTTaGACTTGGTACATTTGTGCC +
Preference number: 4 (lower is better)
Translates to: VCVCVCVCKADILKVFSDGPWFT*TWYICA
Trigger: GGCACAAATGTACCAAGTGCAAGTGAACCAAGGACC...GTCACTAAAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTAAAATACTGCATGTTCTaGAGGTTTGAGGTCTTACTT +
Preference number: 4 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLKYCMF*RFEVLL
Trigger: AAGTAAGACCTCAAACCTGCAGAACATGCAGTATTT...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp CTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAAGCTCACAGGGAGTGCCTTTaGTTCATTATGCACCAAATA +
Preference number: 4 (lower is better)
Translates to: LKNIQVCVWDNMDLSGQAHRECL*FIMHQI
Trigger: TATTTGGTGCATAATGAAGCAAAGGCACTCCCTGTG...AGCTTGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp AGCACACCTTGCAGGAACCTGATGTGGACTCAACATCATGGTTTGGAAACCTTGCACAGGGAGTGCCTTTaGTTCATTATGCACCAAATA +
Preference number: 4 (lower is better)
Translates to: STPCRNLMWTQHHGLETLHRECL*FIMHQI
Trigger: TATTTGGTGCATAATGAAGCAAAGGCACTCCCTGTG...CAAGGTTTCCAAACCATGATGTTGAGTCCACATCAGGTTCCTGCAAGGTGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp TGTTCTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAGTTTGCTGCTGTTCTTaGTTCTGTAAGAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: CSEEHTGLCVGQHGLKWAVCCCS*FCKRSH
Trigger: GTGGCTTCTCTTACAGAAGCAAGAACAGCAGCAAAC...TGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTGACGGTTGGTGCATATaGCACACTTGCCCAAGATAT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVQGRHSESFDGWCI*HTCPRY
Trigger: ATATCTTGGGCAAGTGTGGCATATGCACCAACCGTC...AAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACACACACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp AGCACACCTTGCAGGAACCTGATGTGGACTCAACATCATGGTTTGGAAACCTTGCGAAAGCTGCGGTTGTaGTGTCATTTGTTTCATATG +
Preference number: 4 (lower is better)
Translates to: STPCRNLMWTQHHGLETLRKLRL*CHLFHM
Trigger: CATATGAAACAAATGACAGCACAACCGCAGCTTTCG...CAAGGTTTCCAAACCATGATGTTGAGTCCACATCAGGTTCCTGCAAGGTGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp TGTTCTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAGCTTCTCCTGACTGCTaGCAGTCAGACTGTATAATA +
Preference number: 4 (lower is better)
Translates to: CSEEHTGLCVGQHGLKWAASPDC*QSDCII
Trigger: TATTATACAGTCTGACTGGCAGCAGTCAGGAGAAGC...TGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp CAGCTCAGGGCTTCCTATTTTACACTTTTTACTCTGCTGAATGCCAACTCTCCACAATACTCAATTTCCTaGACAGCAGCTGCATCCTGG +
Preference number: 4 (lower is better)
Translates to: QLRASYFTLFTLLNANSPQYSIS*TAAASW
Trigger: CCAGGATGCAGCTGCTGTGCAGGAAATTGAGTATTG...TGGAGAGTTGGCATTCAGCAGAGTAAAAAGTGTAAAATAGGAAGCCCTGAGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp CTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAAGCTCCGTGGTTTCTTTCTTaGCTTTCCTCGAAGATATTG +
Preference number: 4 (lower is better)
Translates to: LKNIQVCVWDNMDLSGQAPWFLS*LSSKIL
Trigger: CAATATCTTCGAGGAAAGCCAAGAAAGAAACCACGG...AGCTTGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp TCCAGTATTTCTTCAGTACATCATACGTCAGCACCAGATGATCCTGCAACTGCTCGGCTGCTTTTACCGTaGTTTCTTTCTTGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: SSISSVHHTSAPDDPATARLLLP*FLSWLS
Trigger: GGAAAGCCAAGAAAGAAACCACGGTAAAAGCAGCCG...AGCAGTTGCAGGATCATCTGGTGCTGACGTATGATGTACTGAAGAAATACTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp CAGCTCAGGGCTTCCTATTTTACACTTTTTACTCTGCTGAATGCCAACTCTCCAGTGTTCTCCTCAGAATaGGCAGAAACTGTAGCACCA +
Preference number: 4 (lower is better)
Translates to: QLRASYFTLFTLLNANSPVFSSE*AETVAP
Trigger: TGGTGCTACAGTTTCTGCCCATTCTGAGGAGAACAC...TGGAGAGTTGGCATTCAGCAGAGTAAAAAGTGTAAAATAGGAAGCCCTGAGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp TGTTCTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCATACTCTGCACGGCAATaGAGACACAATCTGGATAAC +
Preference number: 4 (lower is better)
Translates to: CSEEHTGLCVGQHGLKWAYSARQ*RHNLDN
Trigger: GTTATCCAGATTGTGTCTCCATTGCCGTGCAGAGTA...TGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp GTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTTAGTGACCTGGGGATGCACTCCTaGTATAAAGCTTTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: VCVCVCVCKADILKVFSDLGMHS*YKAFWN
Trigger: GTTCCAGAAAGCTTTATACCAGGAGTGCATCCCCAG...GTCACTAAAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp TGTTCTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAAGCCTGGATATCTGTTaGCACTTTCACGTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: CSEEHTGLCVGQHGLKWASLDIC*HFHVFL
Trigger: CAGAAACACGTGAAAGTGCCAACAGATATCCAGGCT...TGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp TCCAGTATTTCTTCAGTACATCATACGTCAGCACCAGATGATCCTGCAACTGCTTATCCATCTTGGGGGTaGGGTAAGGAGAAAACGTTG +
Preference number: 4 (lower is better)
Translates to: SSISSVHHTSAPDDPATAYPSWG*GKEKTL
Trigger: CAACGTTTTCTCCTTACCCCACCCCCAAGATGGATA...AGCAGTTGCAGGATCATCTGGTGCTGACGTATGATGTACTGAAGAAATACTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp TGTTCTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAAATGACTATCCATCTTaGGGGTGGGGTAAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: CSEEHTGLCVGQHGLKWANDYPS*GWGKEK
Trigger: TTTCTCCTTACCCCACCCCCAAGATGGATAGTCATT...TGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp CTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAAGCTGTAGATGATGCTCACTaGTTTTGTAGTCAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: LKNIQVCVWDNMDLSGQAVDDAH*FCSQCV
Trigger: CACACACTGACTACAAAACCAGTGAGCATCATCTAC...AGCTTGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp CTCAACATCATGGTTTGGAAACCTTGTGGTTTTTGTTTTTGTGTGTGTGTGTGTGAGGTTCTGTATGGCTaGTGGGAGAAGGTGGTGCTA +
Preference number: 4 (lower is better)
Translates to: LNIMVWKPCGFCFCVCVCEVLYG*WEKVVL
Trigger: TAGCACCACCTTCTCCCATCAGCCATACAGAACCTC...ACACACACACACACAAAAACAAAAACCACAAGGTTTCCAAACCATGATGTTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp CAGCTCAGGGCTTCCTATTTTACACTTTTTACTCTGCTGAATGCCAACTCTCCAGGTTTCCTTTTGCTTTaGATACTGTTCAGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: QLRASYFTLFTLLNANSPGFLLL*ILFRAA
Trigger: GGCAGCTCTGAACAGTATTCAAAGCAAAAGGAAACC...TGGAGAGTTGGCATTCAGCAGAGTAAAAAGTGTAAAATAGGAAGCCCTGAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp CAGCTCAGGGCTTCCTATTTTACACTTTTTACTCTGCTGAATGCCAACTCTCCATTTCACGTGTTTCTGTaGCTTGAGAGTCAGAGCCTT +
Preference number: 4 (lower is better)
Translates to: QLRASYFTLFTLLNANSPFHVFL*LESQSL
Trigger: AAGGCTCTGACTCTCAAGTCACAGAAACACGTGAAA...TGGAGAGTTGGCATTCAGCAGAGTAAAAAGTGTAAAATAGGAAGCCCTGAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTCATCAGCTTTGTATGTaGGGAAGACTTTCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVQGRHSESFHQLCM*GRLSLL
Trigger: GAGAAGGGAAAGTCTTCCTCACATACAAAGCTGATG...AAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACACACACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp TGTTCTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAGAAGCAGTTCTATCATaGTTAAACCCTGGAAGCACT +
Preference number: 4 (lower is better)
Translates to: CSEEHTGLCVGQHGLKWAEAVLS*LNPGST
Trigger: AGTGCTTCCAGGGTTTAATCATGATAGAACTGCTTC...TGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp CTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAAGCTACACTCAATAAGAATTaGCCCATGAGTTGGAGCTAT +
Preference number: 4 (lower is better)
Translates to: LKNIQVCVWDNMDLSGQATLNKN*PMSWSY
Trigger: ATAGCTCCAACTCATGGGTCAATTCTTATTGAGTGT...AGCTTGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp TGTTCTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAGTTTCTACTGGGTGGTaGTTGCTTTTTCTTCGTTTC +
Preference number: 4 (lower is better)
Translates to: CSEEHTGLCVGQHGLKWAVSTGW*LLFLRF
Trigger: GAAACGAAGAAAAAGCAATCACCACCCAGTAGAAAC...TGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp TCCAGTATTTCTTCAGTACATCATACGTCAGCACCAGATGATCCTGCAACTGCTGTTTGCTGCTGTTCTTaGTTCTGTAAGAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: SSISSVHHTSAPDDPATAVCCCS*FCKRSH
Trigger: GTGGCTTCTCTTACAGAAGCAAGAACAGCAGCAAAC...AGCAGTTGCAGGATCATCTGGTGCTGACGTATGATGTACTGAAGAAATACTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp CTCAACATCATGGTTTGGAAACCTTGTGGTTTTTGTTTTTGTGTGTGTGTGTGTGCTCCGCTTTCTTCTTaGAACTCTTGGGCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: LNIMVWKPCGFCFCVCVCAPLSS*NSWAAL
Trigger: GAGAGCTGCCCAAGAGTTGCAAGAAGAAAGCGGAGC...ACACACACACACACAAAAACAAAAACCACAAGGTTTCCAAACCATGATGTTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp AGCACACCTTGCAGGAACCTGATGTGGACTCAACATCATGGTTTGGAAACCTTGTTTCAATATCTTGTTTaGATGGAGCCCAGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: STPCRNLMWTQHHGLETLFQYLV*MEPRER
Trigger: TCTCTCTCTGGGCTCCATCCAAACAAGATATTGAAA...CAAGGTTTCCAAACCATGATGTTGAGTCCACATCAGGTTCCTGCAAGGTGTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp GTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTTAGTGACTGGTTCACTTGCACTTaGTACATTTGTGCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: VCVCVCVCKADILKVFSDWFTCT*YICAFC
Trigger: GCAGAAGGCACAAATGTACCAAGTGCAAGTGAACCA...GTCACTAAAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTTCTTCCACTTTAATCTaGCCAAAGCACGAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVQGRHSESFSSTLI*PKHEPS
Trigger: AGAAGGCTCGTGCTTTGGCCAGATTAAAGTGGAAGA...AAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACACACACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp CAGCTCAGGGCTTCCTATTTTACACTTTTTACTCTGCTGAATGCCAACTCTCCAAGCCTGGATATCTGTTaGCACTTTCACGTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: QLRASYFTLFTLLNANSPSLDIC*HFHVFL
Trigger: CAGAAACACGTGAAAGTGCCAACAGATATCCAGGCT...TGGAGAGTTGGCATTCAGCAGAGTAAAAAGTGTAAAATAGGAAGCCCTGAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp CTCAACATCATGGTTTGGAAACCTTGTGGTTTTTGTTTTTGTGTGTGTGTGTGTTACATAGGCAGCACGTaGAACTGCTCATCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: LNIMVWKPCGFCFCVCVCYIGST*NCSSSG
Trigger: GCCTGAGGATGAGCAGTTCCACGTGCTGCCTATGTA...ACACACACACACACAAAAACAAAAACCACAAGGTTTCCAAACCATGATGTTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp AGCACACCTTGCAGGAACCTGATGTGGACTCAACATCATGGTTTGGAAACCTTGCACACTCCCATTGTATaGAAAAGGTGCATATTGGTT +
Preference number: 4 (lower is better)
Translates to: STPCRNLMWTQHHGLETLHTPIV*KRCILV
Trigger: AACCAATATGCACCTTTTCCATACAATGGGAGTGTG...CAAGGTTTCCAAACCATGATGTTGAGTCCACATCAGGTTCCTGCAAGGTGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp TCCAGTATTTCTTCAGTACATCATACGTCAGCACCAGATGATCCTGCAACTGCTTCACATTTGCCATTCTaGCTTTGTTCACCAGGAGTA +
Preference number: 4 (lower is better)
Translates to: SSISSVHHTSAPDDPATASHLPF*LCSPGV
Trigger: TACTCCTGGTGAACAAAGTCAGAATGGCAAATGTGA...AGCAGTTGCAGGATCATCTGGTGCTGACGTATGATGTACTGAAGAAATACTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp AGCACACCTTGCAGGAACCTGATGTGGACTCAACATCATGGTTTGGAAACCTTGTGTTCAAATTCAACCTaGTTATTGTATGCATCGGGT +
Preference number: 4 (lower is better)
Translates to: STPCRNLMWTQHHGLETLCSNST*LLYASG
Trigger: ACCCGATGCATACAATAATCAGGTTGAATTTGAACA...CAAGGTTTCCAAACCATGATGTTGAGTCCACATCAGGTTCCTGCAAGGTGTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp GTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTTAGTGACGAAGCAGTTCTATCATaGTTAAACCCTGGAAGCACT +
Preference number: 4 (lower is better)
Translates to: VCVCVCVCKADILKVFSDEAVLS*LNPGST
Trigger: AGTGCTTCCAGGGTTTAATCATGATAGAACTGCTTC...GTCACTAAAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp CAGCTCAGGGCTTCCTATTTTACACTTTTTACTCTGCTGAATGCCAACTCTCCAGTTGTGCTCACTATCTaGCCAATACTCAATTTCCTG +
Preference number: 4 (lower is better)
Translates to: QLRASYFTLFTLLNANSPVVLTI*PILNFL
Trigger: CAGGAAATTGAGTATTGGTCAGATAGTGAGCACAAC...TGGAGAGTTGGCATTCAGCAGAGTAAAAAGTGTAAAATAGGAAGCCCTGAGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp CTCAACATCATGGTTTGGAAACCTTGTGGTTTTTGTTTTTGTGTGTGTGTGTGTCAGCAAGAGACTGGATaGAACGCAGGTAACTGGGTT +
Preference number: 4 (lower is better)
Translates to: LNIMVWKPCGFCFCVCVCQQETG*NAGNWV
Trigger: AACCCAGTTACCTGCGTTTCATCCAGTCTCTTGCTG...ACACACACACACACAAAAACAAAAACCACAAGGTTTCCAAACCATGATGTTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp GTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTTAGTGACAGTGAAAGCATATGGTaGTGTAGTCACGGTAGAATC +
Preference number: 4 (lower is better)
Translates to: VCVCVCVCKADILKVFSDSESIW*CSHGRI
Trigger: GATTCTACCGTGACTACATCACCATATGCTTTCACT...GTCACTAAAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp TGTTCTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCACTTTTGTTGGTGTTCTaGTTTCTGAAAAGGACAGGT +
Preference number: 4 (lower is better)
Translates to: CSEEHTGLCVGQHGLKWALLLVF*FLKRTG
Trigger: ACCTGTCCTTTTCAGAAAGCAGAACACCAACAAAAG...TGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp TCCAGTATTTCTTCAGTACATCATACGTCAGCACCAGATGATCCTGCAACTGCTTTAAAAGAGTTCGGTTaGTTCGGTTGGGGTAGTCAT +
Preference number: 4 (lower is better)
Translates to: SSISSVHHTSAPDDPATALKEFG*FGWGSH
Trigger: ATGACTACCCCAACCGAAGCAACCGAACTCTTTTAA...AGCAGTTGCAGGATCATCTGGTGCTGACGTATGATGTACTGAAGAAATACTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp CTCAACATCATGGTTTGGAAACCTTGTGGTTTTTGTTTTTGTGTGTGTGTGTGTATCTCTTGCTCCCTGTaGCCCATCAGGTATTGGCTA +
Preference number: 4 (lower is better)
Translates to: LNIMVWKPCGFCFCVCVCISCSL*PIRYWL
Trigger: TAGCCAATACCTGATGGGGCACAGGGAGCAAGAGAT...ACACACACACACACAAAAACAAAAACCACAAGGTTTCCAAACCATGATGTTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp TCCAGTATTTCTTCAGTACATCATACGTCAGCACCAGATGATCCTGCAACTGCTGCAAGGATATATCCTTaGGTTTTGTCTGATGGAGTG +
Preference number: 4 (lower is better)
Translates to: SSISSVHHTSAPDDPATAARIYP*VLSDGV
Trigger: CACTCCATCAGACAAAACGCAAGGATATATCCTTGC...AGCAGTTGCAGGATCATCTGGTGCTGACGTATGATGTACTGAAGAAATACTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp CTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAAGCTAAATACTGCATGTTCTaGAGGTTTGAGGTCTTACTT +
Preference number: 4 (lower is better)
Translates to: LKNIQVCVWDNMDLSGQAKYCMF*RFEVLL
Trigger: AAGTAAGACCTCAAACCTGCAGAACATGCAGTATTT...AGCTTGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp CTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAAGCTTCTCTTGCTTTATCCTaGTGGACATATTTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: LKNIQVCVWDNMDLSGQASLALS*WTYFLV
Trigger: CACAAGAAAATATGTCCAGCAGGATAAAGCAAGAGA...AGCTTGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp TCCAGTATTTCTTCAGTACATCATACGTCAGCACCAGATGATCCTGCAACTGCTCGAAAGCTGCGGTTGTaGTGTCATTTGTTTCATATG +
Preference number: 4 (lower is better)
Translates to: SSISSVHHTSAPDDPATARKLRL*CHLFHM
Trigger: CATATGAAACAAATGACAGCACAACCGCAGCTTTCG...AGCAGTTGCAGGATCATCTGGTGCTGACGTATGATGTACTGAAGAAATACTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp CTCAACATCATGGTTTGGAAACCTTGTGGTTTTTGTTTTTGTGTGTGTGTGTGTGCTGCTTCTCCTGACTaGTGCCAGTCAGACTGTATA +
Preference number: 4 (lower is better)
Translates to: LNIMVWKPCGFCFCVCVCAASPD*CQSDCI
Trigger: TATACAGTCTGACTGGCAGCAGTCAGGAGAAGCAGC...ACACACACACACACAAAAACAAAAACCACAAGGTTTCCAAACCATGATGTTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp CTCAACATCATGGTTTGGAAACCTTGTGGTTTTTGTTTTTGTGTGTGTGTGTGTCCCTCTGTCTTCATGTaGACTCTCATGACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: LNIMVWKPCGFCFCVCVCPSVFM*TLMTAL
Trigger: CAGAGCAGTCATGAGAGTCCACATGAAGACAGAGGG...ACACACACACACACAAAAACAAAAACCACAAGGTTTCCAAACCATGATGTTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTCATTCTGTAAGCACCTaGAATACCCTCTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVQGRHSESFHSVST*NTLCLH
Trigger: ATGAAGACAGAGGGTATTCCAGGTGCTTACAGAATG...AAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACACACACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp GTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTTAGTGACCATTCTGTAAGCACCTaGAATACCCTCTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: VCVCVCVCKADILKVFSDHSVST*NTLCLH
Trigger: ATGAAGACAGAGGGTATTCCAGGTGCTTACAGAATG...GTCACTAAAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp TCCAGTATTTCTTCAGTACATCATACGTCAGCACCAGATGATCCTGCAACTGCTAATATCTTGTTTGGATaGAGCCCAGAGAGAGATGGT +
Preference number: 4 (lower is better)
Translates to: SSISSVHHTSAPDDPATANILFG*SPERDG
Trigger: ACCATCTCTCTCTGGGCTCCATCCAAACAAGATATT...AGCAGTTGCAGGATCATCTGGTGCTGACGTATGATGTACTGAAGAAATACTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp GTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTTAGTGACAGCTCCATGCTTCCTTaGATGGTTTTGTTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: VCVCVCVCKADILKVFSDSSMLP*MVLFSA
Trigger: TGCAGAAAACAAAACCATCCAAGGAAGCATGGAGCT...GTCACTAAAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTAGCTCCATGCTTCCTTaGATGGTTTTGTTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVQGRHSESFSSMLP*MVLFSA
Trigger: TGCAGAAAACAAAACCATCCAAGGAAGCATGGAGCT...AAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACACACACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTTGCCCCATCAGGTATTaGCTATGTTCTTGTAAACCT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVQGRHSESFCPIRY*LCSCKP
Trigger: AGGTTTACAAGAACATAGCCAATACCTGATGGGGCA...AAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACACACACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp TCCAGTATTTCTTCAGTACATCATACGTCAGCACCAGATGATCCTGCAACTGCTGGGAAATTTGAGTTCTaGGATGCTGGTGTTTGTGAT +
Preference number: 4 (lower is better)
Translates to: SSISSVHHTSAPDDPATAGKFEF*DAGVCD
Trigger: ATCACAAACACCAGCATCCCAGAACTCAAATTTCCC...AGCAGTTGCAGGATCATCTGGTGCTGACGTATGATGTACTGAAGAAATACTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp CAGCTCAGGGCTTCCTATTTTACACTTTTTACTCTGCTGAATGCCAACTCTCCAAGGCATGAGATGAAGTaGGGTAAAAGTTCACATGGT +
Preference number: 4 (lower is better)
Translates to: QLRASYFTLFTLLNANSPRHEMK*GKSSHG
Trigger: ACCATGTGAACTTTTACCCCACTTCATCTCATGCCT...TGGAGAGTTGGCATTCAGCAGAGTAAAAAGTGTAAAATAGGAAGCCCTGAGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTGTAGATGATGCTCACTaGTTTTGTAGTCAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVQGRHSESFVDDAH*FCSQCV
Trigger: CACACACTGACTACAAAACCAGTGAGCATCATCTAC...AAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACACACACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp AGCACACCTTGCAGGAACCTGATGTGGACTCAACATCATGGTTTGGAAACCTTGCTGTATAATAGTTCTTaGGCAGAAGCAGTTCTATCA +
Preference number: 4 (lower is better)
Translates to: STPCRNLMWTQHHGLETLLYNSS*AEAVLS
Trigger: TGATAGAACTGCTTCTGCCCAAGAACTATTATACAG...CAAGGTTTCCAAACCATGATGTTGAGTCCACATCAGGTTCCTGCAAGGTGTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp TGTTCTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCATGTTCAAATTCAACCTaGTTATTGTATGCATCGGGT +
Preference number: 4 (lower is better)
Translates to: CSEEHTGLCVGQHGLKWACSNST*LLYASG
Trigger: ACCCGATGCATACAATAATCAGGTTGAATTTGAACA...TGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR TCA 90 bp CAGCTCAGGGCTTCCTATTTTACACTTTTTACTCTGCTGAATGCCAACTCTCCAACACTCAATAAGAATTaGCCCATGAGTTGGAGCTAT +
Preference number: 4 (lower is better)
Translates to: QLRASYFTLFTLLNANSPTLNKN*PMSWSY
Trigger: ATAGCTCCAACTCATGGGTCAATTCTTATTGAGTGT...TGGAGAGTTGGCATTCAGCAGAGTAAAAAGTGTAAAATAGGAAGCCCTGAGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp CAGCTCAGGGCTTCCTATTTTACACTTTTTACTCTGCTGAATGCCAACTCTCCACTCTTTGCTTATCATTaGTACCTTGGAGATGAGAGA +
Preference number: 4 (lower is better)
Translates to: QLRASYFTLFTLLNANSPLFAYH*YLGDER
Trigger: TCTCTCATCTCCAAGGTAGCAATGATAAGCAAAGAG...TGGAGAGTTGGCATTCAGCAGAGTAAAAAGTGTAAAATAGGAAGCCCTGAGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp TCCAGTATTTCTTCAGTACATCATACGTCAGCACCAGATGATCCTGCAACTGCTTGCATCCTTCACATTTaGCATTCTGACTTTGTTCAC +
Preference number: 4 (lower is better)
Translates to: SSISSVHHTSAPDDPATACILHI*HSDFVH
Trigger: GTGAACAAAGTCAGAATGGCAAATGTGAAGGATGCA...AGCAGTTGCAGGATCATCTGGTGCTGACGTATGATGTACTGAAGAAATACTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp GTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTTAGTGACCATCTTTGTCTGGATTaGATCCTTCACATTTGCCAT +
Preference number: 4 (lower is better)
Translates to: VCVCVCVCKADILKVFSDHLCLD*ILHICH
Trigger: ATGGCAAATGTGAAGGATGCAATCCAGACAAAGATG...GTCACTAAAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp GTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTTAGTGACAACCTGATTATTGTATaGATCGGGTGCAAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: VCVCVCVCKADILKVFSDNLIIV*IGCKLL
Trigger: AAGAAGCTTGCACCCGATGCATACAATAATCAGGTT...GTCACTAAAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp CAGCTCAGGGCTTCCTATTTTACACTTTTTACTCTGCTGAATGCCAACTCTCCACACGCTTTTCCTGTTTaGCATGATTTTTCTGAGACA +
Preference number: 4 (lower is better)
Translates to: QLRASYFTLFTLLNANSPHAFPV*HDFSET
Trigger: TGTCTCAGAAAAATCATGGCAAACAGGAAAAGCGTG...TGGAGAGTTGGCATTCAGCAGAGTAAAAAGTGTAAAATAGGAAGCCCTGAGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp GTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTTAGTGACTTTCAATATCTTGTTTaGATGGAGCCCAGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: VCVCVCVCKADILKVFSDFQYLV*MEPRER
Trigger: TCTCTCTCTGGGCTCCATCCAAACAAGATATTGAAA...GTCACTAAAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp CTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAAGCTTTGGTTTCTTGCTTCTaGCAAACTTACATCCATTAT +
Preference number: 4 (lower is better)
Translates to: LKNIQVCVWDNMDLSGQALVSCF*QTYIHY
Trigger: ATAATGGATGTAAGTTTGCCAGAAGCAAGAAACCAA...AGCTTGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTAAGCTTCTTGTATATTaGAGCAATGACAGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVQGRHSESFKLLVY*SNDSSQ
Trigger: CTGGCTACTGTCATTGCTCCAATATACAAGAAGCTT...AAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACACACACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp CTCAACATCATGGTTTGGAAACCTTGTGGTTTTTGTTTTTGTGTGTGTGTGTGTACCCAAACAGCAGTCTaGGGCTTGGTGTTCAAATTC +
Preference number: 4 (lower is better)
Translates to: LNIMVWKPCGFCFCVCVCTQTAV*GLVFKF
Trigger: GAATTTGAACACCAAGCCCCAGACTGCTGTTTGGGT...ACACACACACACACAAAAACAAAAACCACAAGGTTTCCAAACCATGATGTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp CAGCTCAGGGCTTCCTATTTTACACTTTTTACTCTGCTGAATGCCAACTCTCCATTGGTGAGATGGTCCTaGTTTGGATATCTATGTAGA +
Preference number: 4 (lower is better)
Translates to: QLRASYFTLFTLLNANSPLVRWS*FGYLCR
Trigger: TCTACATAGATATCCAAACCAGGACCATCTCACCAA...TGGAGAGTTGGCATTCAGCAGAGTAAAAAGTGTAAAATAGGAAGCCCTGAGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp CTCAACATCATGGTTTGGAAACCTTGTGGTTTTTGTTTTTGTGTGTGTGTGTGTCGGGATCGTTTACTTTaGTTGTGGCATGAACCTCAC +
Preference number: 4 (lower is better)
Translates to: LNIMVWKPCGFCFCVCVCRDRLL*LWHEPH
Trigger: GTGAGGTTCATGCCACAACCAAAGTAAACGATCCCG...ACACACACACACACAAAAACAAAAACCACAAGGTTTCCAAACCATGATGTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR CAA 72 bp AACCTGATGTGGACTCAACATCATGGTTTGGAAACCTaGTGGTTTTTGTTTTTGTGTGTGTGTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: NLMWTQHHGLET*WFLFLCVCVCV
Trigger: CACACACACACACACACACAAAAACAAAAACCACAAGGTTTCCAAACCATGATGTTGAGTCCACATCAGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp CTCAACATCATGGTTTGGAAACCTTGTGGTTTTTGTTTTTGTGTGTGTGTGTGTCAGCTTTGGGAAGATTaGCACTTGGTGTCTCCATTT +
Preference number: 4 (lower is better)
Translates to: LNIMVWKPCGFCFCVCVCQLWED*HLVSPF
Trigger: AAATGGAGACACCAAGTGGCAATCTTCCCAAAGCTG...ACACACACACACACAAAAACAAAAACCACAAGGTTTCCAAACCATGATGTTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp TCCAGTATTTCTTCAGTACATCATACGTCAGCACCAGATGATCCTGCAACTGCTCCATTGGTTTCCTTTTaGTTTGAATACTGTTCAGAG +
Preference number: 4 (lower is better)
Translates to: SSISSVHHTSAPDDPATAPLVSF*FEYCSE
Trigger: CTCTGAACAGTATTCAAAGCAAAAGGAAACCAATGG...AGCAGTTGCAGGATCATCTGGTGCTGACGTATGATGTACTGAAGAAATACTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp CTCAACATCATGGTTTGGAAACCTTGTGGTTTTTGTTTTTGTGTGTGTGTGTGTTTTTGTCTGATGGAGTaGTTCATGCAAATTCGGGGC +
Preference number: 4 (lower is better)
Translates to: LNIMVWKPCGFCFCVCVCFCLME*FMQIRG
Trigger: GCCCCGAATTTGCATGAAGCACTCCATCAGACAAAA...ACACACACACACACAAAAACAAAAACCACAAGGTTTCCAAACCATGATGTTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp CTCAACATCATGGTTTGGAAACCTTGTGGTTTTTGTTTTTGTGTGTGTGTGTGTCACGAGCCTTCTCTTTaGTTATCATTGCTACCTTGG +
Preference number: 4 (lower is better)
Translates to: LNIMVWKPCGFCFCVCVCHEPSL*LSLLPW
Trigger: CCAAGGTAGCAATGATAAGCAAAGAGAAGGCTCGTG...ACACACACACACACAAAAACAAAAACCACAAGGTTTCCAAACCATGATGTTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp TCCAGTATTTCTTCAGTACATCATACGTCAGCACCAGATGATCCTGCAACTGCTTCTCTTGCTTTATCCTaGTGGACATATTTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: SSISSVHHTSAPDDPATASLALS*WTYFLV
Trigger: CACAAGAAAATATGTCCAGCAGGATAAAGCAAGAGA...AGCAGTTGCAGGATCATCTGGTGCTGACGTATGATGTACTGAAGAAATACTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp TGTTCTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAATCCATTATAGTACATaGTCCAAGAACAACCAAAAG +
Preference number: 4 (lower is better)
Translates to: CSEEHTGLCVGQHGLKWAIHYST*SKNNQK
Trigger: CTTTTGGTTGTTCTTGGAGCATGTACTATAATGGAT...TGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp CTCAACATCATGGTTTGGAAACCTTGTGGTTTTTGTTTTTGTGTGTGTGTGTGTTACTCTGCACGGCAATaGAGACACAATCTGGATAAC +
Preference number: 4 (lower is better)
Translates to: LNIMVWKPCGFCFCVCVCYSARQ*RHNLDN
Trigger: GTTATCCAGATTGTGTCTCCATTGCCGTGCAGAGTA...ACACACACACACACAAAAACAAAAACCACAAGGTTTCCAAACCATGATGTTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp CTCAACATCATGGTTTGGAAACCTTGTGGTTTTTGTTTTTGTGTGTGTGTGTGTTGGTTCACTTGCACTTaGTACATTTGTGCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LNIMVWKPCGFCFCVCVCWFTCT*YICAFC
Trigger: GCAGAAGGCACAAATGTACCAAGTGCAAGTGAACCA...ACACACACACACACAAAAACAAAAACCACAAGGTTTCCAAACCATGATGTTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp CTCAACATCATGGTTTGGAAACCTTGTGGTTTTTGTTTTTGTGTGTGTGTGTGTGTGAACGTCCTGATTTaGGGTCACATTATTCGGGAA +
Preference number: 4 (lower is better)
Translates to: LNIMVWKPCGFCFCVCVCVNVLI*GHIIRE
Trigger: TTCCCGAATAATGTGACCCCAAATCAGGACGTTCAC...ACACACACACACACAAAAACAAAAACCACAAGGTTTCCAAACCATGATGTTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTAGCTTCATCTTTGTCTaGATTGCATCCTTCACATTT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVQGRHSESFSFIFV*IASFTF
Trigger: AAATGTGAAGGATGCAATCCAGACAAAGATGAAGCT...AAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACACACACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTATCCATTATAGTACATaGTCCAAGAACAACCAAAAG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVQGRHSESFIHYST*SKNNQK
Trigger: CTTTTGGTTGTTCTTGGAGCATGTACTATAATGGAT...AAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACACACACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp TCCAGTATTTCTTCAGTACATCATACGTCAGCACCAGATGATCCTGCAACTGCTTTGTTTCATATGGCTTaGATTTTCCATCAGCTTTGT +
Preference number: 4 (lower is better)
Translates to: SSISSVHHTSAPDDPATALFHMA*IFHQLC
Trigger: ACAAAGCTGATGGAAAATGCAAGCCATATGAAACAA...AGCAGTTGCAGGATCATCTGGTGCTGACGTATGATGTACTGAAGAAATACTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTTTGTTTCATATGGCTTaGATTTTCCATCAGCTTTGT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCVQGRHSESFLFHMA*IFHQLC
Trigger: ACAAAGCTGATGGAAAATGCAAGCCATATGAAACAA...AAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACACACACACA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp CTCAACATCATGGTTTGGAAACCTTGTGGTTTTTGTTTTTGTGTGTGTGTGTGTACCTGGTACTATAGCTaGTTTACTGGCATTATCAGC +
Preference number: 4 (lower is better)
Translates to: LNIMVWKPCGFCFCVCVCTWYYS*FTGIIS
Trigger: GCTGATAATGCCAGTAAACCAGCTATAGTACCAGGT...ACACACACACACACAAAAACAAAAACCACAAGGTTTCCAAACCATGATGTTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp CTCAACATCATGGTTTGGAAACCTTGTGGTTTTTGTTTTTGTGTGTGTGTGTGTAGGCATGAGATGAAGTaGGGTAAAAGTTCACATGGT +
Preference number: 4 (lower is better)
Translates to: LNIMVWKPCGFCFCVCVCRHEMK*GKSSHG
Trigger: ACCATGTGAACTTTTACCCCACTTCATCTCATGCCT...ACACACACACACACAAAAACAAAAACCACAAGGTTTCCAAACCATGATGTTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR CAA 72 bp ATTCATTCAAGTAATGTTGACACCAAGCAGAAGCACTaGTATCGAGTATGGCTATGTAGTCAAGCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: IHSSNVDTKQKH*YRVWLCSQAVP
Trigger: AGGAACAGCTTGACTACATAGCCATACTCGATACAAGTGCTTCTGCTTGGTGTCAACATTACTTGAATGAAT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp CTCAACATCATGGTTTGGAAACCTTGTGGTTTTTGTTTTTGTGTGTGTGTGTGTCATCTTTGTCTGGATTaGATCCTTCACATTTGCCAT +
Preference number: 4 (lower is better)
Translates to: LNIMVWKPCGFCFCVCVCHLCLD*ILHICH
Trigger: ATGGCAAATGTGAAGGATGCAATCCAGACAAAGATG...ACACACACACACACAAAAACAAAAACCACAAGGTTTCCAAACCATGATGTTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp CTCAACATCATGGTTTGGAAACCTTGTGGTTTTTGTTTTTGTGTGTGTGTGTGTAACCTGATTATTGTATaGATCGGGTGCAAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: LNIMVWKPCGFCFCVCVCNLIIV*IGCKLL
Trigger: AAGAAGCTTGCACCCGATGCATACAATAATCAGGTT...ACACACACACACACAAAAACAAAAACCACAAGGTTTCCAAACCATGATGTTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR GCA 90 bp CTCAACATCATGGTTTGGAAACCTTGTGGTTTTTGTTTTTGTGTGTGTGTGTGTCACGCTTTTCCTGTTTaGCATGATTTTTCTGAGACA +
Preference number: 4 (lower is better)
Translates to: LNIMVWKPCGFCFCVCVCHAFPV*HDFSET
Trigger: TGTCTCAGAAAAATCATGGCAAACAGGAAAAGCGTG...ACACACACACACACAAAAACAAAAACCACAAGGTTTCCAAACCATGATGTTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp CTCAACATCATGGTTTGGAAACCTTGTGGTTTTTGTTTTTGTGTGTGTGTGTGTCACACTCCCATTGTATaGAAAAGGTGCATATTGGTT +
Preference number: 4 (lower is better)
Translates to: LNIMVWKPCGFCFCVCVCHTPIV*KRCILV
Trigger: AACCAATATGCACCTTTTCCATACAATGGGAGTGTG...ACACACACACACACAAAAACAAAAACCACAAGGTTTCCAAACCATGATGTTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CCA 90 bp CTCAACATCATGGTTTGGAAACCTTGTGGTTTTTGTTTTTGTGTGTGTGTGTGTAGCTTCATCTTTGTCTaGATTGCATCCTTCACATTT +
Preference number: 4 (lower is better)
Translates to: LNIMVWKPCGFCFCVCVCSFIFV*IASFTF
Trigger: AAATGTGAAGGATGCAATCCAGACAAAGATGAAGCT...ACACACACACACACAAAAACAAAAACCACAAGGTTTCCAAACCATGATGTTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
3UTR CAA 72 bp CAGTTATCAGTACATATACAAGCAAACTACGAGGGATaGCAATCCTCTGAAAGCGAATATATTAACCGACAA +
Preference number: 4 (lower is better)
Translates to: QLSVHIQANYEG*QSSESEYINRQ
Trigger: TTGTCGGTTAATATATTCGCTTTCAGAGGATTGCAATCCCTCGTAGTTTGCTTGTATATGTACTGATAACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CCA 90 bp CGGCTGCTGTGGCCTCTGCCCTTGCTGAAGGTGCCTCTGGAGTGTTaGTGGCTGCCGGATGACCGGGCCCGAAAGCTGCGGTTGTGCTGT +
Preference number: 5 (lower is better)
Translates to: RLLWPLPLLKVPLEC*WLPDDRARKLRLCC
Trigger: ACAGCACAACCGCAGCTTTCGGGCCCGGTCATCCGGCAGCCACCAACACTCCAGAGGCACCTTCAGCAAGGGCAGAGGCCACAGCAGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CCA 90 bp CTGCTGTGGCCTCTGCCCTTGCTGAAGGTGCCTCTGGAGTGTTGGTaGCTGCCGGATGACCGGGCCCGAAAGCTGCGGTTGTGCTGTCAT +
Preference number: 5 (lower is better)
Translates to: LLWPLPLLKVPLECW*LPDDRARKLRLCCH
Trigger: ATGACAGCACAACCGCAGCTTTCGGGCCCGGTCATCCGGCAGCCACCAACACTCCAGAGGCACCTTCAGCAAGGGCAGAGGCCACAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CCA 90 bp AGAACCAACAGACTGAGAGTTACCGGGCATGATATGCTGTGGCTGTaGCTGTGGCTGAGGTGTCGTCTGCGGCTGCGGCTGAGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: RTNRLRVTGHDMLWL*LWLRCRLRLRLRWL
Trigger: CAGCCACCTCAGCCGCAGCCGCAGACGACACCTCAGCCACAGCCACAGCCACAGCATATCATGCCCGGTAACTCTCAGTCTGTTGGTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp TCAGAGGTACCCCAGTGCCTCCAGGGCCCTCGACCACACTGGCTAGATGATAGATGTCTGACTTCCTCCTaGCTCAGGCACAGGGAGTGC +
Preference number: 5 (lower is better)
Translates to: SEVPQCLQGPRPHWLDDRCLTSS*LRHREC
Trigger: GCACTCCCTGTGCCTGAGCAAGGAGGAAGTCAGACA...TCTATCATCTAGCCAGTGTGGTCGAGGGCCCTGGAGGCACTGGGGTACCTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CCA 90 bp ACAATGAGAACCAACAGACTGAGAGTTACCGGGCATGATATGCTGTaGCTGTGGCTGTGGCTGAGGTGTCGTCTGCGGCTGCGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: TMRTNRLRVTGHDML*LWLWLRCRLRLRLR
Trigger: CCTCAGCCGCAGCCGCAGACGACACCTCAGCCACAGCCACAGCCACAGCATATCATGCCCGGTAACTCTCAGTCTGTTGGTTCTCATTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS TCA 90 bp GGCACAGGGAGTGCCTTTGCTTCATTATGCACCAAATACCTCTGTTaGGCTGCCTCAGCTGGTGGGGCTGGAGACTCACCCTGGCTTCTG +
Preference number: 5 (lower is better)
Translates to: GTGSAFASLCTKYLC*AASAGGAGDSPWLL
Trigger: CAGAAGCCAGGGTGAGTCTCCAGCCCCACCAGCTGAGGCAGCTCAACAGAGGTATTTGGTGCATAATGAAGCAAAGGCACTCCCTGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS TCA 90 bp TCTGCCCTTGCTGAAGGTGCCTCTGGAGTGTTGGTGGCTGCCGGATaGCCGGGCCCGAAAGCTGCGGTTGTGCTGTCATTTGTTTCATAT +
Preference number: 5 (lower is better)
Translates to: SALAEGASGVLVAAG*PGPKAAVVLSFVSY
Trigger: ATATGAAACAAATGACAGCACAACCGCAGCTTTCGGGCCCGGTCATCCGGCAGCCACCAACACTCCAGAGGCACCTTCAGCAAGGGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp TCAGAGGTACCCCAGTGCCTCCAGGGCCCTCGACCACACTGGCTAGATGATAGACCACTGTACTGCCATTaGGCATGTTCTGCTGGTCTC +
Preference number: 5 (lower is better)
Translates to: SEVPQCLQGPRPHWLDDRPLYCH*ACSAGL
Trigger: GAGACCAGCAGAACATGCCAAATGGCAGTACAGTGG...TCTATCATCTAGCCAGTGTGGTCGAGGGCCCTGGAGGCACTGGGGTACCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS GCA 90 bp CCAGCCAGGTGCTGCCTGTACAGAGCCTTGCGTTTGTTTCCCGTTTaGATCCTTCGGAATCTCTTGCTCCCTGTGCCCCATCAGGTATTG +
Preference number: 5 (lower is better)
Translates to: PARCCLYRALRLFPV*ILRNLLLPVPHQVL
Trigger: CAATACCTGATGGGGCACAGGGAGCAAGAGATTCCGAAGGATGCAAACGGGAAACAAACGCAAGGCTCTGTACAGGCAGCACCTGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp TCAGAGGTACCCCAGTGCCTCCAGGGCCCTCGACCACACTGGCTAGATGATAGAAATCCTCCTGGCATGTaGACATTGCCAGTGGACTGT +
Preference number: 5 (lower is better)
Translates to: SEVPQCLQGPRPHWLDDRNPPGM*TLPVDC
Trigger: ACAGTCCACTGGCAATGTCAACATGCCAGGAGGATT...TCTATCATCTAGCCAGTGTGGTCGAGGGCCCTGGAGGCACTGGGGTACCTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp TCAGAGGTACCCCAGTGCCTCCAGGGCCCTCGACCACACTGGCTAGATGATAGAGCCCGAAAGCTGCGGTaGTGCTGTCATTTGTTTCAT +
Preference number: 5 (lower is better)
Translates to: SEVPQCLQGPRPHWLDDRARKLR*CCHLFH
Trigger: ATGAAACAAATGACAGCACAACCGCAGCTTTCGGGC...TCTATCATCTAGCCAGTGTGGTCGAGGGCCCTGGAGGCACTGGGGTACCTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp TCAGAGGTACCCCAGTGCCTCCAGGGCCCTCGACCACACTGGCTAGATGATAGAATGTTGTCATTCTCCTaGTTGTGGAAGGCGTGGCTG +
Preference number: 5 (lower is better)
Translates to: SEVPQCLQGPRPHWLDDRMLSFS*LWKAWL
Trigger: CAGCCACGCCTTCCACAACAAGGAGAATGACAACAT...TCTATCATCTAGCCAGTGTGGTCGAGGGCCCTGGAGGCACTGGGGTACCTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp TCAGAGGTACCCCAGTGCCTCCAGGGCCCTCGACCACACTGGCTAGATGATAGAGCCTTTTCAGCCATTTaGGCTTCCCAGAGAGCCAAA +
Preference number: 5 (lower is better)
Translates to: SEVPQCLQGPRPHWLDDRAFSAI*ASQRAK
Trigger: TTTGGCTCTCTGGGAAGCCAAAATGGCTGAAAAGGC...TCTATCATCTAGCCAGTGTGGTCGAGGGCCCTGGAGGCACTGGGGTACCTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS GCA 90 bp GAGTTTGACAGCCAGAGGTTCTGTATGGCTGATGGGAGAAGGTGGTaGTATCAGGAATGGACTCAGTCTGGTGCCCTCAGCATGGGTGGT +
Preference number: 5 (lower is better)
Translates to: EFDSQRFCMADGRRW*YQEWTQSGALSMGG
Trigger: ACCACCCATGCTGAGGGCACCAGACTGAGTCCATTCCTGATAGCACCACCTTCTCCCATCAGCCATACAGAACCTCTGGCTGTCAAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
ENSMUST00000197118.5
CDS GCA 90 bp AGGGAGTGCCTTTGCTTCATTATGCACCAAATACCTCTGTTGAGCTaGCTCAGCTGGTGGGGCTGGAGACTCACCCTGGCTTCTGTCCTT +
Preference number: 5 (lower is better)
Translates to: RECLCFIMHQIPLLS*LSWWGWRLTLASVL
Trigger: AAGGACAGAAGCCAGGGTGAGTCTCCAGCCCCACCAGCTGAGGCAGCTCAACAGAGGTATTTGGTGCATAATGAAGCAAAGGCACTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CCA 90 bp CAGAGGTTCTGTATGGCTGATGGGAGAAGGTGGTGCTATCAGGAATaGACTCAGTCTGGTGCCCTCAGCATGGGTGGTTCTGTCCTGTTC +
Preference number: 5 (lower is better)
Translates to: QRFCMADGRRWCYQE*TQSGALSMGGSVLF
Trigger: GAACAGGACAGAACCACCCATGCTGAGGGCACCAGACTGAGTCCATTCCTGATAGCACCACCTTCTCCCATCAGCCATACAGAACCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
ENSMUST00000197118.5
CDS CCA 90 bp CTGGAGTTTGACAGCCAGAGGTTCTGTATGGCTGATGGGAGAAGGTaGTGCTATCAGGAATGGACTCAGTCTGGTGCCCTCAGCATGGGT +
Preference number: 5 (lower is better)
Translates to: LEFDSQRFCMADGRR*CYQEWTQSGALSMG
Trigger: ACCCATGCTGAGGGCACCAGACTGAGTCCATTCCTGATAGCACCACCTTCTCCCATCAGCCATACAGAACCTCTGGCTGTCAAACTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
ENSMUST00000197118.5
CDS CCA 90 bp CTTTGCTTCATTATGCACCAAATACCTCTGTTGAGCTGCCTCAGCTaGTGGGGCTGGAGACTCACCCTGGCTTCTGTCCTTAAGCCCCTG +
Preference number: 5 (lower is better)
Translates to: LCFIMHQIPLLSCLS*WGWRLTLASVLKPL
Trigger: CAGGGGCTTAAGGACAGAAGCCAGGGTGAGTCTCCAGCCCCACCAGCTGAGGCAGCTCAACAGAGGTATTTGGTGCATAATGAAGCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTATGTCTGACTTCCTCCTaGCTCAGGCACAGGGAGTGC +
Preference number: 5 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLCLTSS*LRHREC
Trigger: GCACTCCCTGTGCCTGAGCAAGGAGGAAGTCAGACA...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp TCAGAGGTACCCCAGTGCCTCCAGGGCCCTCGACCACACTGGCTAGATGATAGATGGAGAGGAGATCTCTaGCTTTATCCTGCTGGACAT +
Preference number: 5 (lower is better)
Translates to: SEVPQCLQGPRPHWLDDRWRGDL*LYPAGH
Trigger: ATGTCCAGCAGGATAAAGCAAGAGATCTCCTCTCCA...TCTATCATCTAGCCAGTGTGGTCGAGGGCCCTGGAGGCACTGGGGTACCTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp TCTAGGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCGCCCATTGTCACGGCTaGGAGAGGAGATCTCTTGCT +
Preference number: 5 (lower is better)
Translates to: SRTVQLQSKAVLVTRSEAAHCHG*ERRSLA
Trigger: AGCAAGAGATCTCCTCTCCAAGCCGTGACAATGGGC...GGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCCTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS GCA 90 bp GGTCTGTGTCTGACTTCCTCCTTGCTCAGGCACAGGGAGTGCCTTTaGTTCATTATGCACCAAATACCTCTGTTGAGCTGCCTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: GLCLTSSLLRHRECL*FIMHQIPLLSCLSW
Trigger: CCAGCTGAGGCAGCTCAACAGAGGTATTTGGTGCATAATGAAGCAAAGGCACTCCCTGTGCCTGAGCAAGGAGGAAGTCAGACACAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CCA 90 bp GAACGCTCGGTGCTTGCGGGTGAGCCTCAGATGACGGATCTGTCCTaGGGATGCACTCCTGGTATAAAGCTTTCTGGAACTGAAGATGTT +
Preference number: 5 (lower is better)
Translates to: ERSVLAGEPQMTDLS*GCTPGIKLSGTEDV
Trigger: AACATCTTCAGTTCCAGAAAGCTTTATACCAGGAGTGCATCCCCAGGACAGATCCGTCATCTGAGGCTCACCCGCAAGCACCGAGCGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CCA 90 bp CTCCCAAACTCATCCTCAGGGGCGATGATGTACATAGGCAGCACGTaGAACTGCTCATCCTCAGGCTTAGCTCCGACTTCTCGATTGTCT +
Preference number: 5 (lower is better)
Translates to: LPNSSSGAMMYIGST*NCSSSGLAPTSRLS
Trigger: AGACAATCGAGAAGTCGGAGCTAAGCCTGAGGATGAGCAGTTCCACGTGCTGCCTATGTACATCATCGCCCCTGAGGATGAGTTTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp TCAGAGGTACCCCAGTGCCTCCAGGGCCCTCGACCACACTGGCTAGATGATAGATGGGAAGATTGCCACTaGGTGTCTCCATTTACTTCT +
Preference number: 5 (lower is better)
Translates to: SEVPQCLQGPRPHWLDDRWEDCH*VSPFTS
Trigger: AGAAGTAAATGGAGACACCAAGTGGCAATCTTCCCA...TCTATCATCTAGCCAGTGTGGTCGAGGGCCCTGGAGGCACTGGGGTACCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp TCTAGGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCTGCCTGTACAGAGCCTaGCGTTTGTTTCCCGTTTGC +
Preference number: 5 (lower is better)
Translates to: SRTVQLQSKAVLVTRSEACLYRA*RLFPVC
Trigger: GCAAACGGGAAACAAACGCAAGGCTCTGTACAGGCA...GGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCCTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp ACAGTCCTATTGCACAGCACACCACCAGCTTCTAGGACTGTCCAGCTGCAGTCCTTTCGAGCTGCTTTCTaGGTCTTGGCTTTCTTGGGC +
Preference number: 5 (lower is better)
Translates to: TVLLHSTPPASRTVQLQSFRAAF*VLAFLG
Trigger: GCCCAAGAAAGCCAAGACCAAGAAAGCAGCTCGAAA...GGACTGCAGCTGGACAGTCCTAGAAGCTGGTGGTGTGCTGTGCAATAGGACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS TCA 90 bp GGATCTGTCCTGGGGATGCACTCCTGGTATAAAGCTTTCTGGAACTaGAGATGTTGGTCCCCCATACCTGGAGACGGTCCTTGGTTCACT +
Preference number: 5 (lower is better)
Translates to: GSVLGMHSWYKAFWN*RCWSPIPGDGPWFT
Trigger: AGTGAACCAAGGACCGTCTCCAGGTATGGGGGACCAACATCTTCAGTTCCAGAAAGCTTTATACCAGGAGTGCATCCCCAGGACAGATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS GCA 90 bp TGCTTCATGCAAATTCGGGGCTTTCAGTTCTATCCAGCCAGGTGCTaGCTGTACAGAGCCTTGCGTTTGTTTCCCGTTTGCATCCTTCGG +
Preference number: 5 (lower is better)
Translates to: CFMQIRGFQFYPARC*LYRALRLFPVCILR
Trigger: CCGAAGGATGCAAACGGGAAACAAACGCAAGGCTCTGTACAGGCAGCACCTGGCTGGATAGAACTGAAAGCCCCGAATTTGCATGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS GCA 90 bp GAGTGTTGGTGGCTGCCGGATGACCGGGCCCGAAAGCTGCGGTTGTaGTGTCATTTGTTTCATATGGCTTGCATTTTCCATCAGCTTTGT +
Preference number: 5 (lower is better)
Translates to: ECWWLPDDRARKLRL*CHLFHMACIFHQLC
Trigger: ACAAAGCTGATGGAAAATGCAAGCCATATGAAACAAATGACAGCACAACCGCAGCTTTCGGGCCCGGTCATCCGGCAGCCACCAACACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS GCA 90 bp CAGCTGCATCCTGGCCTGACACCTCAGGCTGCTTCTCCTGACTGCTaGCAGTCAGACTGTATAATAGTTCTTGGGCAGAAGCAGTTCTAT +
Preference number: 5 (lower is better)
Translates to: QLHPGLTPQAASPDC*QSDCIIVLGQKQFY
Trigger: ATAGAACTGCTTCTGCCCAAGAACTATTATACAGTCTGACTGGCAGCAGTCAGGAGAAGCAGCCTGAGGTGTCAGGCCAGGATGCAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CCA 90 bp AATGACTGCAGAACCTCAATGGACCCCATCCGTATCTTCTTCTCCTaGCCTTCCGTACTCCCAAACTCATCCTCAGGGGCGATGATGTAC +
Preference number: 5 (lower is better)
Translates to: NDCRTSMDPIRIFFS*PSVLPNSSSGAMMY
Trigger: GTACATCATCGCCCCTGAGGATGAGTTTGGGAGTACGGAAGGCCAGGAGAAGAAGATACGGATGGGGTCCATTGAGGTTCTGCAGTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp TCAGAGGTACCCCAGTGCCTCCAGGGCCCTCGACCACACTGGCTAGATGATAGAATTCTGACATTTTTCTaGACTTTTCAGGGCTCGGTG +
Preference number: 5 (lower is better)
Translates to: SEVPQCLQGPRPHWLDDRILTFF*TFQGSV
Trigger: CACCGAGCCCTGAAAAGTCAAGAAAAATGTCAGAAT...TCTATCATCTAGCCAGTGTGGTCGAGGGCCCTGGAGGCACTGGGGTACCTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp TCAGAGGTACCCCAGTGCCTCCAGGGCCCTCGACCACACTGGCTAGATGATAGACTTATCATTGCTACCTaGGAGATGAGAGAAAGTCTG +
Preference number: 5 (lower is better)
Translates to: SEVPQCLQGPRPHWLDDRLIIAT*EMRESL
Trigger: CAGACTTTCTCTCATCTCCAAGGTAGCAATGATAAG...TCTATCATCTAGCCAGTGTGGTCGAGGGCCCTGGAGGCACTGGGGTACCTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp ACAGTCCTATTGCACAGCACACCACCAGCTTCTAGGACTGTCCAGCTGCAGTCCTGGAGAGGAGATCTCTaGCTTTATCCTGCTGGACAT +
Preference number: 5 (lower is better)
Translates to: TVLLHSTPPASRTVQLQSWRGDL*LYPAGH
Trigger: ATGTCCAGCAGGATAAAGCAAGAGATCTCCTCTCCA...GGACTGCAGCTGGACAGTCCTAGAAGCTGGTGGTGTGCTGTGCAATAGGACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp AGCACACCTTGCAGGAACCTGATGTGGACTCAACATCATGGTTTGGAAACCTTGTGTGCTTTTGGTTGCTaGAGGCTCTGCAGCTCGGGC +
Preference number: 5 (lower is better)
Translates to: STPCRNLMWTQHHGLETLCAFGC*RLCSSG
Trigger: GCCCGAGCTGCAGAGCCTCAAGCAACCAAAAGCACA...CAAGGTTTCCAAACCATGATGTTGAGTCCACATCAGGTTCCTGCAAGGTGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp ACAGTCCTATTGCACAGCACACCACCAGCTTCTAGGACTGTCCAGCTGCAGTCCACTCTTGAGAGCCCATaGGCTATGTTGTCATTCTCC +
Preference number: 5 (lower is better)
Translates to: TVLLHSTPPASRTVQLQSTLESP*AMLSFS
Trigger: GGAGAATGACAACATAGCCAATGGGCTCTCAAGAGT...GGACTGCAGCTGGACAGTCCTAGAAGCTGGTGGTGTGCTGTGCAATAGGACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS TCA 90 bp GAGGTCACGGGCTCTCCATTATCACTTAGTCCGGAGACATTTGGCTaGCGGCTGCTTTTACCGTGGTTTCTTTCTTGGCTTTCCTCGAAG +
Preference number: 5 (lower is better)
Translates to: EVTGSPLSLSPETFG*RLLLPWFLSWLSSK
Trigger: CTTCGAGGAAAGCCAAGAAAGAAACCACGGTAAAAGCAGCCGTCAGCCAAATGTCTCCGGACTAAGTGATAATGGAGAGCCCGTGACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS GCA 90 bp GGACAACTCGATAGCAGCCTGACTGCTAGGGGTGTTTACATGAGATaGGGTACTCTGCACGGCAATGGAGACACAATCTGGATAACACTG +
Preference number: 5 (lower is better)
Translates to: GQLDSSLTARGVYMR*GTLHGNGDTIWITL
Trigger: CAGTGTTATCCAGATTGTGTCTCCATTGCCGTGCAGAGTACCGCATCTCATGTAAACACCCCTAGCAGTCAGGCTGCTATCGAGTTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS GCA 90 bp AACTCATCCTCAGGGGCGATGATGTACATAGGCAGCACGTGGAACTaGTCATCCTCAGGCTTAGCTCCGACTTCTCGATTGTCTTCTCTA +
Preference number: 5 (lower is better)
Translates to: NSSSGAMMYIGSTWN*SSSGLAPTSRLSSL
Trigger: TAGAGAAGACAATCGAGAAGTCGGAGCTAAGCCTGAGGATGAGCAGTTCCACGTGCTGCCTATGTACATCATCGCCCCTGAGGATGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CCA 90 bp GTTCTCAGCAAGAGACTGGATGAAACGCAGGTAACTGGGTTCCTGTaGCCCTGTGGGCTCACGCTTTTCCTGTTTGCCATGATTTTTCTG +
Preference number: 5 (lower is better)
Translates to: VLSKRLDETQVTGFL*PCGLTLFLFAMIFL
Trigger: CAGAAAAATCATGGCAAACAGGAAAAGCGTGAGCCCACAGGGCCACAGGAACCCAGTTACCTGCGTTTCATCCAGTCTCTTGCTGAGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp TCTAGGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCCTTCCTTGGATGGTTTaGTTTTCTGCACGAGATGGG +
Preference number: 5 (lower is better)
Translates to: SRTVQLQSKAVLVTRSEALPWMV*FSARDG
Trigger: CCCATCTCGTGCAGAAAACAAAACCATCCAAGGAAG...GGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTAGCATGTTCTGCAGGTTaGAGGTCTTACTTCCTACGG +
Preference number: 5 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLACSAG*RSYFLR
Trigger: CCGTAGGAAGTAAGACCTCAAACCTGCAGAACATGC...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTAGATACAGGCTCAGTCTaGATTGGCCTAAGCATCTGG +
Preference number: 5 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLDTGSV*IGLSIW
Trigger: CCAGATGCTTAGGCCAATCAAGACTGAGCCTGTATC...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp TCTAGGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCACTCTTGAGAGCCCATaGGCTATGTTGTCATTCTCC +
Preference number: 5 (lower is better)
Translates to: SRTVQLQSKAVLVTRSEATLESP*AMLSFS
Trigger: GGAGAATGACAACATAGCCAATGGGCTCTCAAGAGT...GGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCCTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTAGCCTTTTCAGCCATTTaGGCTTCCCAGAGAGCCAAA +
Preference number: 5 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLAFSAI*ASQRAK
Trigger: TTTGGCTCTCTGGGAAGCCAAAATGGCTGAAAAGGC...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS TCA 90 bp ATGATGCTCACTGGTTTTGTAGTCAGTGTGTGGGTGGCTGTATGGTaGTCTGGAGGCAGCTCCCATGAAATGACTATCCATCTTGGGGGT +
Preference number: 5 (lower is better)
Translates to: MMLTGFVVSVWVAVW*SGGSSHEMTIHLGG
Trigger: ACCCCCAAGATGGATAGTCATTTCATGGGAGCTGCCTCCAGATCACCATACAGCCACCCACACACTGACTACAAAACCAGTGAGCATCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS GCA 90 bp TGCGTTTGTTTCCCGTTTGCATCCTTCGGAATCTCTTGCTCCCTGTaGCCCATCAGGTATTGGCTATGTTCTTGTAAACCTCCACTGTGG +
Preference number: 5 (lower is better)
Translates to: CVCFPFASFGISCSL*PIRYWLCSCKPPLW
Trigger: CCACAGTGGAGGTTTACAAGAACATAGCCAATACCTGATGGGGCACAGGGAGCAAGAGATTCCGAAGGATGCAAACGGGAAACAAACGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS GCA 90 bp GCTGCCCATTGTCACGGCTTGGAGAGGAGATCTCTTGCTTTATCCTaGTGGACATATTTTCTTGTGGCGGTGACAAGGGGTATCTATAGG +
Preference number: 5 (lower is better)
Translates to: AAHCHGLERRSLALS*WTYFLVAVTRGIYR
Trigger: CCTATAGATACCCCTTGTCACCGCCACAAGAAAATATGTCCAGCAGGATAAAGCAAGAGATCTCCTCTCCAAGCCGTGACAATGGGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS GCA 90 bp AACTGCTTCAGGTGCTGTTCCATGGTCTCAATGATGCTCTTTGGCTaGCCATTGTCACGGCTTGGAGAGGAGATCTCTTGCTTTATCCTG +
Preference number: 5 (lower is better)
Translates to: NCFRCCSMVSMMLFG*PLSRLGEEISCFIL
Trigger: CAGGATAAAGCAAGAGATCTCCTCTCCAAGCCGTGACAATGGGCAGCCAAAGAGCATCATTGAGACCATGGAACAGCACCTGAAGCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CCA 90 bp CCATCAGCTTTGTATGTGAGGAAGACTTTCCCTTCTCAGTCCTACTaGAGCAGTTCTCCAGAGAGGAACGCTTTCGAGCTGCTTTCTTGG +
Preference number: 5 (lower is better)
Translates to: PSALYVRKTFPSQSY*SSSPERNAFELLSW
Trigger: CCAAGAAAGCAGCTCGAAAGCGTTCCTCTCTGGAGAACTGCTCCAGTAGGACTGAGAAGGGAAAGTCTTCCTCACATACAAAGCTGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTACTTCCATTCTGGAGTTaGACAGCCAGAGGTTCTGTA +
Preference number: 5 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLLPFWS*TARGSV
Trigger: TACAGAACCTCTGGCTGTCAAACTCCAGAATGGAAG...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp CTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAAGCTTGCCTGTACAGAGCCTaGCGTTTGTTTCCCGTTTGC +
Preference number: 5 (lower is better)
Translates to: LKNIQVCVWDNMDLSGQACLYRA*RLFPVC
Trigger: GCAAACGGGAAACAAACGCAAGGCTCTGTACAGGCA...AGCTTGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp CTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAAGCTCTGGAACTGAAGATGTaGGTCCCCCATACCTGGAGA +
Preference number: 5 (lower is better)
Translates to: LKNIQVCVWDNMDLSGQALELKM*VPHTWR
Trigger: TCTCCAGGTATGGGGGACCAACATCTTCAGTTCCAG...AGCTTGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp TCTAGGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCAGATTTGAGGGAAATTaGAGTTCTGGGATGCTGGTG +
Preference number: 5 (lower is better)
Translates to: SRTVQLQSKAVLVTRSEARFEGN*SSGMLV
Trigger: CACCAGCATCCCAGAACTCAAATTTCCCTCAAATCT...GGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCCTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp AGCACACCTTGCAGGAACCTGATGTGGACTCAACATCATGGTTTGGAAACCTTGATGACCAGGCTGGGATaGCTGTGTTTGCTGCTGTTC +
Preference number: 5 (lower is better)
Translates to: STPCRNLMWTQHHGLETLMTRLG*LCLLLF
Trigger: GAACAGCAGCAAACACAGCAATCCCAGCCTGGTCAT...CAAGGTTTCCAAACCATGATGTTGAGTCCACATCAGGTTCCTGCAAGGTGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp TCAGAGGTACCCCAGTGCCTCCAGGGCCCTCGACCACACTGGCTAGATGATAGATTTGTTTCATATGGCTaGCATTTTCCATCAGCTTTG +
Preference number: 5 (lower is better)
Translates to: SEVPQCLQGPRPHWLDDRFVSYG*HFPSAL
Trigger: CAAAGCTGATGGAAAATGCAAGCCATATGAAACAAA...TCTATCATCTAGCCAGTGTGGTCGAGGGCCCTGGAGGCACTGGGGTACCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp TCTAGGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCGGTAAGGAGAAAACGTaGCTAGGTGGTGTACATTTG +
Preference number: 5 (lower is better)
Translates to: SRTVQLQSKAVLVTRSEAGKEKT*LGGVHL
Trigger: CAAATGTACACCACCTAGCAACGTTTTCTCCTTACC...GGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS TCA 90 bp TCCCACAACATGATGGCAATTACCATCACCGCCGTCTCACATGTGTaGTTAGGTCGCACTCGTACCAAACACAGTAGTTTCTCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: SHNMMAITITAVSHV*LGRTRTKHSSFSSS
Trigger: TGAGGAGGAGAAACTACTGTGTTTGGTACGAGTGCGACCTAATCACACATGTGAGACGGCGGTGATGGTAATTGCCATCATGTTGTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS TCA 90 bp ACGTCTGTTGGTGAAGGGTGTGGATGGGTGGTAAGTTCTGATTGGTaGGATGGTCCTGGTTTGGATATCTATGTAGATCCCTGGACTGAG +
Preference number: 5 (lower is better)
Translates to: TSVGEGCGWVVSSDW*DGPGLDIYVDPWTE
Trigger: CTCAGTCCAGGGATCTACATAGATATCCAAACCAGGACCATCTCACCAATCAGAACTTACCACCCATCCACACCCTTCACCAACAGACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
ENSMUST00000198974.2
CDS GCA 90 bp CGGGCTCTCCATTATCACTTAGTCCGGAGACATTTGGCTGACGGCTaGTTTTACCGTGGTTTCTTTCTTGGCTTTCCTCGAAGATATTGC +
Preference number: 5 (lower is better)
Translates to: RALHYHLVRRHLADG*FYRGFFLGFPRRYC
Trigger: GCAATATCTTCGAGGAAAGCCAAGAAAGAAACCACGGTAAAAGCAGCCGTCAGCCAAATGTCTCCGGACTAAGTGATAATGGAGAGCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CCA 90 bp CTGAAACTGCTTCAGGTGCTGTTCCATGGTCTCAATGATGCTCTTTaGCTGCCCATTGTCACGGCTTGGAGAGGAGATCTCTTGCTTTAT +
Preference number: 5 (lower is better)
Translates to: LKLLQVLFHGLNDAL*LPIVTAWRGDLLLY
Trigger: ATAAAGCAAGAGATCTCCTCTCCAAGCCGTGACAATGGGCAGCCAAAGAGCATCATTGAGACCATGGAACAGCACCTGAAGCAGTTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp GTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTTAGTGACGCCCATTGTCACGGCTaGGAGAGGAGATCTCTTGCT +
Preference number: 5 (lower is better)
Translates to: VCVCVCVCKADILKVFSDAHCHG*ERRSLA
Trigger: AGCAAGAGATCTCCTCTCCAAGCCGTGACAATGGGC...GTCACTAAAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp AGCACACCTTGCAGGAACCTGATGTGGACTCAACATCATGGTTTGGAAACCTTGTTTCGAGCTGCTTTCTaGGTCTTGGCTTTCTTGGGC +
Preference number: 5 (lower is better)
Translates to: STPCRNLMWTQHHGLETLFRAAF*VLAFLG
Trigger: GCCCAAGAAAGCCAAGACCAAGAAAGCAGCTCGAAA...CAAGGTTTCCAAACCATGATGTTGAGTCCACATCAGGTTCCTGCAAGGTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp AGCACACCTTGCAGGAACCTGATGTGGACTCAACATCATGGTTTGGAAACCTTGGCCCGAAAGCTGCGGTaGTGCTGTCATTTGTTTCAT +
Preference number: 5 (lower is better)
Translates to: STPCRNLMWTQHHGLETLARKLR*CCHLFH
Trigger: ATGAAACAAATGACAGCACAACCGCAGCTTTCGGGC...CAAGGTTTCCAAACCATGATGTTGAGTCCACATCAGGTTCCTGCAAGGTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTAACTGGCACACTCCCATaGTATGGAAAAGGTGCATAT +
Preference number: 5 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLTGTLP*YGKGAY
Trigger: ATATGCACCTTTTCCATACAATGGGAGTGTGCCAGT...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CCA 90 bp ATGACCGGGCCCGAAAGCTGCGGTTGTGCTGTCATTTGTTTCATATaGCTTGCATTTTCCATCAGCTTTGTATGTGAGGAAGACTTTCCC +
Preference number: 5 (lower is better)
Translates to: MTGPESCGCAVICFI*LAFSISFVCEEDFP
Trigger: GGGAAAGTCTTCCTCACATACAAAGCTGATGGAAAATGCAAGCCATATGAAACAAATGACAGCACAACCGCAGCTTTCGGGCCCGGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp AGCACACCTTGCAGGAACCTGATGTGGACTCAACATCATGGTTTGGAAACCTTGACAGCTTTGGGAAGATaGCCACTTGGTGTCTCCATT +
Preference number: 5 (lower is better)
Translates to: STPCRNLMWTQHHGLETLTALGR*PLGVSI
Trigger: AATGGAGACACCAAGTGGCAATCTTCCCAAAGCTGT...CAAGGTTTCCAAACCATGATGTTGAGTCCACATCAGGTTCCTGCAAGGTGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTAACCGTGGTTTCTTTCTaGGCTTTCCTCGAAGATATT +
Preference number: 5 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLTVVSF*AFLEDI
Trigger: AATATCTTCGAGGAAAGCCAAGAAAGAAACCACGGT...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTATGGTTTCCTTTTGCTTaGAATACTGTTCAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLWFPFA*NTVQSC
Trigger: GCAGCTCTGAACAGTATTCAAAGCAAAAGGAAACCA...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp AGCACACCTTGCAGGAACCTGATGTGGACTCAACATCATGGTTTGGAAACCTTGAGGGAACTTCGAGCTTaGCCTGAAGTAAGCACCATT +
Preference number: 5 (lower is better)
Translates to: STPCRNLMWTQHHGLETLRELRA*PEVSTI
Trigger: AATGGTGCTTACTTCAGGCAAAGCTCGAAGTTCCCT...CAAGGTTTCCAAACCATGATGTTGAGTCCACATCAGGTTCCTGCAAGGTGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp CAGCTCAGGGCTTCCTATTTTACACTTTTTACTCTGCTGAATGCCAACTCTCCACTGGAACTGAAGATGTaGGTCCCCCATACCTGGAGA +
Preference number: 5 (lower is better)
Translates to: QLRASYFTLFTLLNANSPLELKM*VPHTWR
Trigger: TCTCCAGGTATGGGGGACCAACATCTTCAGTTCCAG...TGGAGAGTTGGCATTCAGCAGAGTAAAAAGTGTAAAATAGGAAGCCCTGAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTAGAAAGTCTGAGGCATTaGCTCTTTATTCTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLESLRH*LFILPL
Trigger: CAGAGGAAGAATAAAGAGCAAATGCCTCAGACTTTC...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp TCCAGTATTTCTTCAGTACATCATACGTCAGCACCAGATGATCCTGCAACTGCTATGACCAGGCTGGGATaGCTGTGTTTGCTGCTGTTC +
Preference number: 5 (lower is better)
Translates to: SSISSVHHTSAPDDPATAMTRLG*LCLLLF
Trigger: GAACAGCAGCAAACACAGCAATCCCAGCCTGGTCAT...AGCAGTTGCAGGATCATCTGGTGCTGACGTATGATGTACTGAAGAAATACTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp TCCAGTATTTCTTCAGTACATCATACGTCAGCACCAGATGATCCTGCAACTGCTGTCTCTCTTCCTCTTTaGGCTCAGCTCCATGTAGCC +
Preference number: 5 (lower is better)
Translates to: SSISSVHHTSAPDDPATAVSLPL*AQLHVA
Trigger: GGCTACATGGAGCTGAGCCAAAAGAGGAAGAGAGAC...AGCAGTTGCAGGATCATCTGGTGCTGACGTATGATGTACTGAAGAAATACTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp GTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTTAGTGACGTCTCTCTTCCTCTTTaGGCTCAGCTCCATGTAGCC +
Preference number: 5 (lower is better)
Translates to: VCVCVCVCKADILKVFSDVSLPL*AQLHVA
Trigger: GGCTACATGGAGCTGAGCCAAAAGAGGAAGAGAGAC...GTCACTAAAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp GTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTTAGTGACCCACTGTACTGCCATTaGGCATGTTCTGCTGGTCTC +
Preference number: 5 (lower is better)
Translates to: VCVCVCVCKADILKVFSDPLYCH*ACSAGL
Trigger: GAGACCAGCAGAACATGCCAAATGGCAGTACAGTGG...GTCACTAAAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp TCTAGGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCCATTTTCCATCAGCTTaGTATGTGAGGAAGACTTTC +
Preference number: 5 (lower is better)
Translates to: SRTVQLQSKAVLVTRSEAHFPSA*YVRKTF
Trigger: GAAAGTCTTCCTCACATACAAAGCTGATGGAAAATG...GGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp AGCACACCTTGCAGGAACCTGATGTGGACTCAACATCATGGTTTGGAAACCTTGAGCCCATTGGCTATGTaGTCATTCTCCTTGTTGTGG +
Preference number: 5 (lower is better)
Translates to: STPCRNLMWTQHHGLETLSPLAM*SFSLLW
Trigger: CCACAACAAGGAGAATGACAACATAGCCAATGGGCT...CAAGGTTTCCAAACCATGATGTTGAGTCCACATCAGGTTCCTGCAAGGTGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS TCA 90 bp TTGGGCAGAAGCAGTTCTATCATGATTAAACCCTGGAAGCACTCTTaGGAGCCCATTGGCTATGTTGTCATTCTCCTTGTTGTGGAAGGC +
Preference number: 5 (lower is better)
Translates to: LGRSSSIMIKPWKHS*EPIGYVVILLVVEG
Trigger: GCCTTCCACAACAAGGAGAATGACAACATAGCCAATGGGCTCTCAAGAGTGCTTCCAGGGTTTAATCATGATAGAACTGCTTCTGCCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS TCA 90 bp TTTGGTTGTGGCATGAACCTCACACTTTGCACACTCAATAAGAATTaGCCCATGAGTTGGAGCTATAGCCACCCCTCCAATGCAAGGATC +
Preference number: 5 (lower is better)
Translates to: FGCGMNLTLCTLNKN*PMSWSYSHPSNARI
Trigger: GATCCTTGCATTGGAGGGGTGGCTATAGCTCCAACTCATGGGTCAATTCTTATTGAGTGTGCAAAGTGTGAGGTTCATGCCACAACCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS TCA 90 bp TACAAATGTGTTGTAAGGCCCTGTGACCTGAGTGAAAGCATATGGTaGTGTAGTCACGGTAGAATCCGTAGTCACAGACCCTGTGTTCTC +
Preference number: 5 (lower is better)
Translates to: YKCVVRPCDLSESIW*CSHGRIRSHRPCVL
Trigger: GAGAACACAGGGTCTGTGACTACGGATTCTACCGTGACTACATCACCATATGCTTTCACTCAGGTCACAGGGCCTTACAACACATTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS TCA 90 bp GGTCTCTGGATTCTCACCCTGACAACAACAGTTTCTACTGGGTGGTaGTTGCTTTTTCTTCGTTTCATTCTGAGAACAGCGACGGTTGGT +
Preference number: 5 (lower is better)
Translates to: GLWILTLTTTVSTGW*LLFLRFILRTATVG
Trigger: ACCAACCGTCGCTGTTCTCAGAATGAAACGAAGAAAAAGCAATCACCACCCAGTAGAAACTGTTGTTGTCAGGGTGAGAATCCAGAGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000196398.5
CDS CCA 90 bp CTTTCATGTGGGATATTCCATAACAGCTTTGGGAAGATTGCCACTTaGTGTCTCCATTTACTTCTGGATGAGGTCTCTCTGCTAACGGGC +
Preference number: 5 (lower is better)
Translates to: LSCGIFHNSFGKIAT*CLHLLLDEVSLLTG
Trigger: GCCCGTTAGCAGAGAGACCTCATCCAGAAGTAAATGGAGACACCAAGTGGCAATCTTCCCAAAGCTGTTATGGAATATCCCACATGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CCA 90 bp TTCCATGGTCTCAATGATGCTCTTTGGCTGCCCATTGTCACGGCTTaGAGAGGAGATCTCTTGCTTTATCCTGCTGGACATATTTTCTTG +
Preference number: 5 (lower is better)
Translates to: FHGLNDALWLPIVTA*RGDLLLYPAGHIFL
Trigger: CAAGAAAATATGTCCAGCAGGATAAAGCAAGAGATCTCCTCTCCAAGCCGTGACAATGGGCAGCCAAAGAGCATCATTGAGACCATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp TGTTCTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCACTTCCTTGGATGGTTTaGTTTTCTGCACGAGATGGG +
Preference number: 5 (lower is better)
Translates to: CSEEHTGLCVGQHGLKWALPWMV*FSARDG
Trigger: CCCATCTCGTGCAGAAAACAAAACCATCCAAGGAAG...TGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTAATCCTCCTGGCATGTaGACATTGCCAGTGGACTGT +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCVQGRHSESFNPPGM*TLPVDC
Trigger: ACAGTCCACTGGCAATGTCAACATGCCAGGAGGATT...AAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACACACACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp CTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAAGCTGGAGGGATTTACTCTTaGCTGGAAATGATACTGAGG +
Preference number: 5 (lower is better)
Translates to: LKNIQVCVWDNMDLSGQAGGIYS*LEMILR
Trigger: CCTCAGTATCATTTCCAGCAAAGAGTAAATCCCTCC...AGCTTGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp TCCAGTATTTCTTCAGTACATCATACGTCAGCACCAGATGATCCTGCAACTGCTGATACAGGCTCAGTCTaGATTGGCCTAAGCATCTGG +
Preference number: 5 (lower is better)
Translates to: SSISSVHHTSAPDDPATADTGSV*IGLSIW
Trigger: CCAGATGCTTAGGCCAATCAAGACTGAGCCTGTATC...AGCAGTTGCAGGATCATCTGGTGCTGACGTATGATGTACTGAAGAAATACTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp TGTTCTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCACGATTGTCTTCTCTATaGAGGGTGACCACCACTGTA +
Preference number: 5 (lower is better)
Translates to: CSEEHTGLCVGQHGLKWARLSSL*RVTTTV
Trigger: TACAGTGGTGGTCACCCTCAATAGAGAAGACAATCG...TGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp GGACTGTCCAGCTGCAGTCCAAAGCTGTCCTCGTCACTAGATCAGAAGCCATTACATTTTCCATCAGCTTaGTATGTGAGGAAGACTTTC +
Preference number: 5 (lower is better)
Translates to: GLSSCSPKLSSSLDQKPLHFPSA*YVRKTF
Trigger: GAAAGTCTTCCTCACATACAAAGCTGATGGAAAATG...TAATGGCTTCTGATCTAGTGACGAGGACAGCTTTGGACTGCAGCTGGACAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS TCA 90 bp GTTTCAATATCTTGTTTGGATGGAGCCCAGAGAGAGATGGTTCACTaGCTGTGCGTTTTATCCCTCCATTCTGTAAGCACCTGGAATACC +
Preference number: 5 (lower is better)
Translates to: VSISCLDGAQREMVH*LCVLSLHSVSTWNT
Trigger: GGTATTCCAGGTGCTTACAGAATGGAGGGATAAAACGCACAGTCAGTGAACCATCTCTCTCTGGGCTCCATCCAAACAAGATATTGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS TCA 90 bp CAACAGTTTCTACTGGGTGGTGATTGCTTTTTCTTCGTTTCATTCTaGGAACAGCGACGGTTGGTGCATATGCCACACTTGCCCAAGATA +
Preference number: 5 (lower is better)
Translates to: QQFLLGGDCFFFVSF*EQRRLVHMPHLPKI
Trigger: TATCTTGGGCAAGTGTGGCATATGCACCAACCGTCGCTGTTCTCAGAATGAAACGAAGAAAAAGCAATCACCACCCAGTAGAAACTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000196398.5
CDS CCA 90 bp TTGGTGTTCTGCTTTCTGAAAAGGACAGGTACCTGGTACTATAGCTaGTTTACTGGCATTATCAGCATCACAGGCCTTAGTCACCATTGC +
Preference number: 5 (lower is better)
Translates to: LVFCFLKRTGTWYYS*FTGIISITGLSHHC
Trigger: GCAATGGTGACTAAGGCCTGTGATGCTGATAATGCCAGTAAACCAGCTATAGTACCAGGTACCTGTCCTTTTCAGAAAGCAGAACACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CCA 90 bp GATGGTCTATTTTCCCTTCCCTTAAAAGAGTTCGGTTGCTTCGGTTaGGGTAGTCATGGTGTTCTTCCAAAGCTACATCATTTAGAGCGC +
Preference number: 5 (lower is better)
Translates to: DGLFSLPLKEFGCFG*GSHGVLPKLHHLER
Trigger: GCGCTCTAAATGATGTAGCTTTGGAAGAACACCATGACTACCCCAACCGAAGCAACCGAACTCTTTTAAGGGAAGGGAAAATAGACCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CCA 90 bp ATGAACCCGAGGCATGAGATGAAGTGGGGTAAAAGTTCACATGGTTaGTATCTCCATAAATATCTGAGGTGTGTGCTGAGCTGGGATAAG +
Preference number: 5 (lower is better)
Translates to: MNPRHEMKWGKSSHG*YLHKYLRCVLSWDK
Trigger: CTTATCCCAGCTCAGCACACACCTCAGATATTTATGGAGATACCAACCATGTGAACTTTTACCCCACTTCATCTCATGCCTCGGGTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp TGTTCTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCATGGGAAGATTGCCACTaGGTGTCTCCATTTACTTCT +
Preference number: 5 (lower is better)
Translates to: CSEEHTGLCVGQHGLKWAWEDCH*VSPFTS
Trigger: AGAAGTAAATGGAGACACCAAGTGGCAATCTTCCCA...TGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp AGCACACCTTGCAGGAACCTGATGTGGACTCAACATCATGGTTTGGAAACCTTGTATTCCATAACAGCTTaGGGAAGATTGCCACTTGGT +
Preference number: 5 (lower is better)
Translates to: STPCRNLMWTQHHGLETLYSITA*GRLPLG
Trigger: ACCAAGTGGCAATCTTCCCAAAGCTGTTATGGAATA...CAAGGTTTCCAAACCATGATGTTGAGTCCACATCAGGTTCCTGCAAGGTGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp AGCACACCTTGCAGGAACCTGATGTGGACTCAACATCATGGTTTGGAAACCTTGACCGTGGTTTCTTTCTaGGCTTTCCTCGAAGATATT +
Preference number: 5 (lower is better)
Translates to: STPCRNLMWTQHHGLETLTVVSF*AFLEDI
Trigger: AATATCTTCGAGGAAAGCCAAGAAAGAAACCACGGT...CAAGGTTTCCAAACCATGATGTTGAGTCCACATCAGGTTCCTGCAAGGTGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp CTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAAGCTGGGAGAATCTGTAAGTaGCTCGAATTTGGTGTTAAG +
Preference number: 5 (lower is better)
Translates to: LKNIQVCVWDNMDLSGQAGRICK*LEFGVK
Trigger: CTTAACACCAAATTCGAGCAACTTACAGATTCTCCC...AGCTTGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTCGATTGTCTTCTCTATaGAGGGTGACCACCACTGTA +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCVQGRHSESFRLSSL*RVTTTV
Trigger: TACAGTGGTGGTCACCCTCAATAGAGAAGACAATCG...AAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACACACACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS TCA 90 bp GATGGGCCTATGTCCAAAGCTGACTTTTGTTGGTGTTCTGCTTTCTaGAAAGGACAGGTACCTGGTACTATAGCTGGTTTACTGGCATTA +
Preference number: 5 (lower is better)
Translates to: DGPMSKADFCWCSAF*KGQVPGTIAGLLAL
Trigger: TAATGCCAGTAAACCAGCTATAGTACCAGGTACCTGTCCTTTTCAGAAAGCAGAACACCAACAAAAGTCAGCTTTGGACATAGGCCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS TCA 90 bp GTATGTACAGATGGATTCAGACTCTGGCTAGATGATGTCTTGGGTTaGTGGTCTATTTTCCCTTCCCTTAAAAGAGTTCGGTTGCTTCGG +
Preference number: 5 (lower is better)
Translates to: VCTDGFRLWLDDVLG*WSIFPSLKRVRLLR
Trigger: CCGAAGCAACCGAACTCTTTTAAGGGAAGGGAAAATAGACCATCAACCCAAGACATCATCTAGCCAGAGTCTGAATCCATCTGTACATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS TCA 90 bp AGCTTCTTGTATATTGGAGCAATGACAGTAGCCAGGTTTTGCAAATaGGAACCTAGTCTCTCTTCCTCTTTTGGCTCAGCTCCATGTAGC +
Preference number: 5 (lower is better)
Translates to: SFLYIGAMTVARFCK*EPSLSSSFGSAPCS
Trigger: GCTACATGGAGCTGAGCCAAAAGAGGAAGAGAGACTAGGTTCTCATTTGCAAAACCTGGCTACTGTCATTGCTCCAATATACAAGAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
ENSMUST00000198974.2
CDS GCA 90 bp ACAGCAGTCTGGGGCTTGGTGTTCAAATTCAACCTGATTATTGTATaGATCGGGTGCAAGCTTCTTGTATATTGGAGCAATGACAGTAGC +
Preference number: 5 (lower is better)
Translates to: TAVWGLVFKFNLIIV*IGCKLLVYWSNDSS
Trigger: GCTACTGTCATTGCTCCAATATACAAGAAGCTTGCACCCGATGCATACAATAATCAGGTTGAATTTGAACACCAAGCCCCAGACTGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CCA 90 bp GTAGAAACAAATTCTTATGCCTATACAGTACAAGTGAGATCCTGGTaGGGTGATTCCGGTCGGGATCGTTTACTTTGGTTGTGGCATGAA +
Preference number: 5 (lower is better)
Translates to: VETNSYAYTVQVRSW*GDSGRDRLLWLWHE
Trigger: TTCATGCCACAACCAAAGTAAACGATCCCGACCGGAATCACCCCACCAGGATCTCACTTGTACTGTATAGGCATAAGAATTTGTTTCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CCA 90 bp TTGGTAGAAACAAATTCTTATGCCTATACAGTACAAGTGAGATCCTaGTGGGGTGATTCCGGTCGGGATCGTTTACTTTGGTTGTGGCAT +
Preference number: 5 (lower is better)
Translates to: LVETNSYAYTVQVRS*WGDSGRDRLLWLWH
Trigger: ATGCCACAACCAAAGTAAACGATCCCGACCGGAATCACCCCACCAGGATCTCACTTGTACTGTATAGGCATAAGAATTTGTTTCTACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp TGTTCTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCATATTCCATAACAGCTTaGGGAAGATTGCCACTTGGT +
Preference number: 5 (lower is better)
Translates to: CSEEHTGLCVGQHGLKWAYSITA*GRLPLG
Trigger: ACCAAGTGGCAATCTTCCCAAAGCTGTTATGGAATA...TGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp CAGCTCAGGGCTTCCTATTTTACACTTTTTACTCTGCTGAATGCCAACTCTCCATTGGTTCACTTGCACTaGGTACATTTGTGCCTTCTG +
Preference number: 5 (lower is better)
Translates to: QLRASYFTLFTLLNANSPLVHLH*VHLCLL
Trigger: CAGAAGGCACAAATGTACCAAGTGCAAGTGAACCAA...TGGAGAGTTGGCATTCAGCAGAGTAAAAAGTGTAAAATAGGAAGCCCTGAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp TCCAGTATTTCTTCAGTACATCATACGTCAGCACCAGATGATCCTGCAACTGCTTTGGTTCACTTGCACTaGGTACATTTGTGCCTTCTG +
Preference number: 5 (lower is better)
Translates to: SSISSVHHTSAPDDPATALVHLH*VHLCLL
Trigger: CAGAAGGCACAAATGTACCAAGTGCAAGTGAACCAA...AGCAGTTGCAGGATCATCTGGTGCTGACGTATGATGTACTGAAGAAATACTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTGGAGGGATTTACTCTTaGCTGGAAATGATACTGAGG +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCVQGRHSESFGGIYS*LEMILR
Trigger: CCTCAGTATCATTTCCAGCAAAGAGTAAATCCCTCC...AAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACACACACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTAGTCTCTGTGGCCTGTaGACTCAAATGCTTATCACT +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCVQGRHSESFSLCGL*TQMLIT
Trigger: AGTGATAAGCATTTGAGTCAACAGGCCACAGAGACT...AAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACACACACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp GTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTTAGTGACAGTCTCTGTGGCCTGTaGACTCAAATGCTTATCACT +
Preference number: 5 (lower is better)
Translates to: VCVCVCVCKADILKVFSDSLCGL*TQMLIT
Trigger: AGTGATAAGCATTTGAGTCAACAGGCCACAGAGACT...GTCACTAAAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp CAGCTCAGGGCTTCCTATTTTACACTTTTTACTCTGCTGAATGCCAACTCTCCAAGATTTGAGGGAAATTaGAGTTCTGGGATGCTGGTG +
Preference number: 5 (lower is better)
Translates to: QLRASYFTLFTLLNANSPRFEGN*SSGMLV
Trigger: CACCAGCATCCCAGAACTCAAATTTCCCTCAAATCT...TGGAGAGTTGGCATTCAGCAGAGTAAAAAGTGTAAAATAGGAAGCCCTGAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp TGTTCTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCACGGTTGTGCTGTCATTaGTTTCATATGGCTTGCATT +
Preference number: 5 (lower is better)
Translates to: CSEEHTGLCVGQHGLKWARLCCH*FHMACI
Trigger: AATGCAAGCCATATGAAACAAATGACAGCACAACCG...TGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp TCCAGTATTTCTTCAGTACATCATACGTCAGCACCAGATGATCCTGCAACTGCTACTGGCACACTCCCATaGTATGGAAAAGGTGCATAT +
Preference number: 5 (lower is better)
Translates to: SSISSVHHTSAPDDPATATGTLP*YGKGAY
Trigger: ATATGCACCTTTTCCATACAATGGGAGTGTGCCAGT...AGCAGTTGCAGGATCATCTGGTGCTGACGTATGATGTACTGAAGAAATACTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp GTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTTAGTGACGGTAAGGAGAAAACGTaGCTAGGTGGTGTACATTTG +
Preference number: 5 (lower is better)
Translates to: VCVCVCVCKADILKVFSDGKEKT*LGGVHL
Trigger: CAAATGTACACCACCTAGCAACGTTTTCTCCTTACC...GTCACTAAAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS TCA 90 bp GTTCTTGTAAACCTCCACTGTGGCCATGATTTGGCAGGTAATACATaGGATATTCTGACATTTTTCTTGACTTTTCAGGGCTCGGTGAGC +
Preference number: 5 (lower is better)
Translates to: VLVNLHCGHDLAGNT*DILTFFLTFQGSVS
Trigger: GCTCACCGAGCCCTGAAAAGTCAAGAAAAATGTCAGAATATCTCATGTATTACCTGCCAAATCATGGCCACAGTGGAGGTTTACAAGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS TCA 90 bp TGTCATTTGTTTCATATGGCTTGCATTTTCCATCAGCTTTGTATGTaGGGAAGACTTTCCCTTCTCAGTCCTACTGGAGCAGTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: CHLFHMACIFHQLCM*GRLSLLSPTGAVLQ
Trigger: CTGGAGAACTGCTCCAGTAGGACTGAGAAGGGAAAGTCTTCCTCACATACAAAGCTGATGGAAAATGCAAGCCATATGAAACAAATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS GCA 90 bp TGGGGCTTGGTGTTCAAATTCAACCTGATTATTGTATGCATCGGGTaGAAGCTTCTTGTATATTGGAGCAATGACAGTAGCCAGGTTTTG +
Preference number: 5 (lower is better)
Translates to: WGLVFKFNLIIVCIG*KLLVYWSNDSSQVL
Trigger: CAAAACCTGGCTACTGTCATTGCTCCAATATACAAGAAGCTTGCACCCGATGCATACAATAATCAGGTTGAATTTGAACACCAAGCCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp GTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTTAGTGACTCTAGTTTCAATATCTaGTTTGGATGGAGCCCAGAG +
Preference number: 5 (lower is better)
Translates to: VCVCVCVCKADILKVFSDSSFNI*FGWSPE
Trigger: CTCTGGGCTCCATCCAAACAAGATATTGAAACTAGA...GTCACTAAAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp TCCAGTATTTCTTCAGTACATCATACGTCAGCACCAGATGATCCTGCAACTGCTTGGTTTCCTTTTGCTTaGAATACTGTTCAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: SSISSVHHTSAPDDPATAWFPFA*NTVQSC
Trigger: GCAGCTCTGAACAGTATTCAAAGCAAAAGGAAACCA...AGCAGTTGCAGGATCATCTGGTGCTGACGTATGATGTACTGAAGAAATACTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp CAGCTCAGGGCTTCCTATTTTACACTTTTTACTCTGCTGAATGCCAACTCTCCAGGGAGAATCTGTAAGTaGCTCGAATTTGGTGTTAAG +
Preference number: 5 (lower is better)
Translates to: QLRASYFTLFTLLNANSPGRICK*LEFGVK
Trigger: CTTAACACCAAATTCGAGCAACTTACAGATTCTCCC...TGGAGAGTTGGCATTCAGCAGAGTAAAAAGTGTAAAATAGGAAGCCCTGAGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp CTCAACATCATGGTTTGGAAACCTTGTGGTTTTTGTTTTTGTGTGTGTGTGTGTGCATGTTCTGCAGGTTaGAGGTCTTACTTCCTACGG +
Preference number: 5 (lower is better)
Translates to: LNIMVWKPCGFCFCVCVCACSAG*RSYFLR
Trigger: CCGTAGGAAGTAAGACCTCAAACCTGCAGAACATGC...ACACACACACACACAAAAACAAAAACCACAAGGTTTCCAAACCATGATGTTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp GTGTGTGTGTGTGTGTGTGTGTGCAAGGCAGACATTCTGAAAGTTTTTAGTGACTCATCTTTGTCTGGATaGCATCCTTCACATTTGCCA +
Preference number: 5 (lower is better)
Translates to: VCVCVCVCKADILKVFSDSSLSG*HPSHLP
Trigger: TGGCAAATGTGAAGGATGCAATCCAGACAAAGATGA...GTCACTAAAAACTTTCAGAATGTCTGCCTTGCACACACACACACACACACACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp CTGAAGAACATACAGGTCTGTGTGTGGGACAACATGGACTTAAGTGGGCAAGCTTTTGTTTCATATGGCTaGCATTTTCCATCAGCTTTG +
Preference number: 5 (lower is better)
Translates to: LKNIQVCVWDNMDLSGQAFVSYG*HFPSAL
Trigger: CAAAGCTGATGGAAAATGCAAGCCATATGAAACAAA...AGCTTGCCCACTTAAGTCCATGTTGTCCCACACACAGACCTGTATGTTCTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS GCA 90 bp CAGCTCCTAGATGGGTATAATAAGGAGCTTCATCTTTGTCTGGATTaGATCCTTCACATTTGCCATTCTGACTTTGTTCACCAGGAGTAT +
Preference number: 5 (lower is better)
Translates to: QLLDGYNKELHLCLD*ILHICHSDFVHQEY
Trigger: ATACTCCTGGTGAACAAAGTCAGAATGGCAAATGTGAAGGATGCAATCCAGACAAAGATGAAGCTCCTTATTATACCCATCTAGGAGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp CTCAACATCATGGTTTGGAAACCTTGTGGTTTTTGTTTTTGTGTGTGTGTGTGTCTTCCATTCTGGAGTTaGACAGCCAGAGGTTCTGTA +
Preference number: 5 (lower is better)
Translates to: LNIMVWKPCGFCFCVCVCLPFWS*TARGSV
Trigger: TACAGAACCTCTGGCTGTCAAACTCCAGAATGGAAG...ACACACACACACACAAAAACAAAAACCACAAGGTTTCCAAACCATGATGTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp CTCAACATCATGGTTTGGAAACCTTGTGGTTTTTGTTTTTGTGTGTGTGTGTGTAGGGAACTTCGAGCTTaGCCTGAAGTAAGCACCATT +
Preference number: 5 (lower is better)
Translates to: LNIMVWKPCGFCFCVCVCRELRA*PEVSTI
Trigger: AATGGTGCTTACTTCAGGCAAAGCTCGAAGTTCCCT...ACACACACACACACAAAAACAAAAACCACAAGGTTTCCAAACCATGATGTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp CTCAACATCATGGTTTGGAAACCTTGTGGTTTTTGTTTTTGTGTGTGTGTGTGTAGCCCATTGGCTATGTaGTCATTCTCCTTGTTGTGG +
Preference number: 5 (lower is better)
Translates to: LNIMVWKPCGFCFCVCVCSPLAM*SFSLLW
Trigger: CCACAACAAGGAGAATGACAACATAGCCAATGGGCT...ACACACACACACACAAAAACAAAAACCACAAGGTTTCCAAACCATGATGTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS TCA 90 bp ACTGGCACACTCCCATTGTATGGAAAAGGTGCATATTGGTTATTCTaGTTATTGTATGCATCGGGTGCAAGCTTCTTGTATATTGGAGCA +
Preference number: 5 (lower is better)
Translates to: TGTLPLYGKGAYWLF*LLYASGASFLYIGA
Trigger: TGCTCCAATATACAAGAAGCTTGCACCCGATGCATACAATAATCAGAATAACCAATATGCACCTTTTCCATACAATGGGAGTGTGCCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000198974.2
CDS CCA 90 bp CTTTCTTGGCTTTCCTCGAAGATATTGCTTTCTCCCTTAGCTTTTTaGTCTAGTTTCAATATCTTGTTTGGATGGAGCCCAGAGAGAGAT +
Preference number: 5 (lower is better)
Translates to: LSWLSSKILLSPLAF*SSFNILFGWSPERD
Trigger: ATCTCTCTCTGGGCTCCATCCAAACAAGATATTGAAACTAGACCAAAAAGCTAAGGGAGAAAGCAATATCTTCGAGGAAAGCCAAGAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp CTCAACATCATGGTTTGGAAACCTTGTGGTTTTTGTTTTTGTGTGTGTGTGTGTTCTAGTTTCAATATCTaGTTTGGATGGAGCCCAGAG +
Preference number: 5 (lower is better)
Translates to: LNIMVWKPCGFCFCVCVCSSFNI*FGWSPE
Trigger: CTCTGGGCTCCATCCAAACAAGATATTGAAACTAGA...ACACACACACACACAAAAACAAAAACCACAAGGTTTCCAAACCATGATGTTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp CTCAACATCATGGTTTGGAAACCTTGTGGTTTTTGTTTTTGTGTGTGTGTGTGTGAAAGTCTGAGGCATTaGCTCTTTATTCTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: LNIMVWKPCGFCFCVCVCESLRH*LFILPL
Trigger: CAGAGGAAGAATAAAGAGCAAATGCCTCAGACTTTC...ACACACACACACACAAAAACAAAAACCACAAGGTTTCCAAACCATGATGTTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp CTCAACATCATGGTTTGGAAACCTTGTGGTTTTTGTTTTTGTGTGTGTGTGTGTTCATCTTTGTCTGGATaGCATCCTTCACATTTGCCA +
Preference number: 5 (lower is better)
Translates to: LNIMVWKPCGFCFCVCVCSSLSG*HPSHLP
Trigger: TGGCAAATGTGAAGGATGCAATCCAGACAAAGATGA...ACACACACACACACAAAAACAAAAACCACAAGGTTTCCAAACCATGATGTTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS-3UTR CAA 90 bp CTCAACATCATGGTTTGGAAACCTTGTGGTTTTTGTTTTTGTGTGTGTGTGTGTCGGTTGTGCTGTCATTaGTTTCATATGGCTTGCATT +
Preference number: 5 (lower is better)
Translates to: LNIMVWKPCGFCFCVCVCRLCCH*FHMACI
Trigger: AATGCAAGCCATATGAAACAAATGACAGCACAACCG...ACACACACACACACAAAAACAAAAACCACAAGGTTTCCAAACCATGATGTTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS GCA 90 bp TATAATAAGGAGCTTCATCTTTGTCTGGATTGCATCCTTCACATTTaGCATTCTGACTTTGTTCACCAGGAGTATCTGATTCTGAAACAT +
Preference number: 5 (lower is better)
Translates to: YNKELHLCLDCILHI*HSDFVHQEYLILKH
Trigger: ATGTTTCAGAATCAGATACTCCTGGTGAACAAAGTCAGAATGGCAAATGTGAAGGATGCAATCCAGACAAAGATGAAGCTCCTTATTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CCA 72 bp TGGCCTCTGCCCTTGCTGAAGGTGCCTCTGGAGTGTTaGTGGCTGCCGGATGACCGGGCCCGAAAGCTGCGG +
Preference number: 6 (lower is better)
Translates to: WPLPLLKVPLEC*WLPDDRARKLR
Trigger: CCGCAGCTTTCGGGCCCGGTCATCCGGCAGCCACCAACACTCCAGAGGCACCTTCAGCAAGGGCAGAGGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CCA 72 bp CCTCTGCCCTTGCTGAAGGTGCCTCTGGAGTGTTGGTaGCTGCCGGATGACCGGGCCCGAAAGCTGCGGTTG +
Preference number: 6 (lower is better)
Translates to: PLPLLKVPLECW*LPDDRARKLRL
Trigger: CAACCGCAGCTTTCGGGCCCGGTCATCCGGCAGCCACCAACACTCCAGAGGCACCTTCAGCAAGGGCAGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CCA 72 bp CAAATACCTCTGTTGAGCTGCCTCAGCTGGTGGGGCTaGAGACTCACCCTGGCTTCTGTCCTTAAGCCCCTG +
Preference number: 6 (lower is better)
Translates to: QIPLLSCLSWWG*RLTLASVLKPL
Trigger: CAGGGGCTTAAGGACAGAAGCCAGGGTGAGTCTCCAGCCCCACCAGCTGAGGCAGCTCAACAGAGGTATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS GCA 72 bp AGCCAGAGGTTCTGTATGGCTGATGGGAGAAGGTGGTaGTATCAGGAATGGACTCAGTCTGGTGCCCTCAGC +
Preference number: 6 (lower is better)
Translates to: SQRFCMADGRRW*YQEWTQSGALS
Trigger: GCTGAGGGCACCAGACTGAGTCCATTCCTGATAGCACCACCTTCTCCCATCAGCCATACAGAACCTCTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
ENSMUST00000197118.5
CDS CCA 72 bp TGGGAGAAGGTGGTGCTATCAGGAATGGACTCAGTCTaGTGCCCTCAGCATGGGTGGTTCTGTCCTGTTCCA +
Preference number: 6 (lower is better)
Translates to: WEKVVLSGMDSV*CPQHGWFCPVP
Trigger: TGGAACAGGACAGAACCACCCATGCTGAGGGCACCAGACTGAGTCCATTCCTGATAGCACCACCTTCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
ENSMUST00000197118.5
CDS CCA 72 bp GACAGCCAGAGGTTCTGTATGGCTGATGGGAGAAGGTaGTGCTATCAGGAATGGACTCAGTCTGGTGCCCTC +
Preference number: 6 (lower is better)
Translates to: DSQRFCMADGRR*CYQEWTQSGAL
Trigger: GAGGGCACCAGACTGAGTCCATTCCTGATAGCACCACCTTCTCCCATCAGCCATACAGAACCTCTGGCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
ENSMUST00000197118.5
CDS CCA 72 bp ATGCACCAAATACCTCTGTTGAGCTGCCTCAGCTGGTaGGGCTGGAGACTCACCCTGGCTTCTGTCCTTAAG +
Preference number: 6 (lower is better)
Translates to: MHQIPLLSCLSW*GWRLTLASVLK
Trigger: CTTAAGGACAGAAGCCAGGGTGAGTCTCCAGCCCCACCAGCTGAGGCAGCTCAACAGAGGTATTTGGTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CCA 72 bp AGAACCTCAATGGACCCCATCCGTATCTTCTTCTCCTaGCCTTCCGTACTCCCAAACTCATCCTCAGGGGCG +
Preference number: 6 (lower is better)
Translates to: RTSMDPIRIFFS*PSVLPNSSSGA
Trigger: CGCCCCTGAGGATGAGTTTGGGAGTACGGAAGGCCAGGAGAAGAAGATACGGATGGGGTCCATTGAGGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CAA 90 bp TCCAGCCAGGTGCTGCCTGTACAGAGCCTTGCGTTTGTTTCCCGTTaGCATCCTTCGGAATCTCTTGCTCCCTGTGCCCCATCAGGTATT +
Preference number: 6 (lower is better)
Translates to: SSQVLPVQSLAFVSR*HPSESLAPCAPSGI
Trigger: AATACCTGATGGGGCACAGGGAGCAAGAGATTCCGAAGGATGCAAACGGGAAACAAACGCAAGGCTCTGTACAGGCAGCACCTGGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS TCA 72 bp AGTGCCTTTGCTTCATTATGCACCAAATACCTCTGTTaGGCTGCCTCAGCTGGTGGGGCTGGAGACTCACCC +
Preference number: 6 (lower is better)
Translates to: SAFASLCTKYLC*AASAGGAGDSP
Trigger: GGGTGAGTCTCCAGCCCCACCAGCTGAGGCAGCTCAACAGAGGTATTTGGTGCATAATGAAGCAAAGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS GCA 72 bp CTTTGCTTCATTATGCACCAAATACCTCTGTTGAGCTaGCTCAGCTGGTGGGGCTGGAGACTCACCCTGGCT +
Preference number: 6 (lower is better)
Translates to: LCFIMHQIPLLS*LSWWGWRLTLA
Trigger: AGCCAGGGTGAGTCTCCAGCCCCACCAGCTGAGGCAGCTCAACAGAGGTATTTGGTGCATAATGAAGCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS GCA 72 bp TCAGGGGCGATGATGTACATAGGCAGCACGTGGAACTaGTCATCCTCAGGCTTAGCTCCGACTTCTCGATTG +
Preference number: 6 (lower is better)
Translates to: SGAMMYIGSTWN*SSSGLAPTSRL
Trigger: CAATCGAGAAGTCGGAGCTAAGCCTGAGGATGAGCAGTTCCACGTGCTGCCTATGTACATCATCGCCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS GCA 72 bp CCTGGCCTGACACCTCAGGCTGCTTCTCCTGACTGCTaGCAGTCAGACTGTATAATAGTTCTTGGGCAGAAG +
Preference number: 6 (lower is better)
Translates to: PGLTPQAASPDC*QSDCIIVLGQK
Trigger: CTTCTGCCCAAGAACTATTATACAGTCTGACTGGCAGCAGTCAGGAGAAGCAGCCTGAGGTGTCAGGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CCA 72 bp ATTATGCACCAAATACCTCTGTTGAGCTGCCTCAGCTaGTGGGGCTGGAGACTCACCCTGGCTTCTGTCCTT +
Preference number: 6 (lower is better)
Translates to: IMHQIPLLSCLS*WGWRLTLASVL
Trigger: AAGGACAGAAGCCAGGGTGAGTCTCCAGCCCCACCAGCTGAGGCAGCTCAACAGAGGTATTTGGTGCATAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CCA 72 bp TCATCCTCAGGGGCGATGATGTACATAGGCAGCACGTaGAACTGCTCATCCTCAGGCTTAGCTCCGACTTCT +
Preference number: 6 (lower is better)
Translates to: SSSGAMMYIGST*NCSSSGLAPTS
Trigger: AGAAGTCGGAGCTAAGCCTGAGGATGAGCAGTTCCACGTGCTGCCTATGTACATCATCGCCCCTGAGGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CAA 72 bp TTGGTCCCCCATACCTGGAGACGGTCCTTGGTTCACTaGCACTTGGTACATTTGTGCCTTCTGCTCTGGCTG +
Preference number: 6 (lower is better)
Translates to: LVPHTWRRSLVH*HLVHLCLLLWL
Trigger: CAGCCAGAGCAGAAGGCACAAATGTACCAAGTGCAAGTGAACCAAGGACCGTCTCCAGGTATGGGGGACCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CAA 72 bp GCTGCTGCTGCTGCTGCTGGCAGATTTGAGGGAAATTaGAGTTCTGGGATGCTGGTGTTTGTGATGCCTGCG +
Preference number: 6 (lower is better)
Translates to: AAAAAAGRFEGN*SSGMLVFVMPA
Trigger: CGCAGGCATCACAAACACCAGCATCCCAGAACTCAAATTTCCCTCAAATCTGCCAGCAGCAGCAGCAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CAA 72 bp GTCCTTCTGAGGAGGGGTCTGTGTCTGACTTCCTCCTaGCTCAGGCACAGGGAGTGCCTTTGCTTCATTATG +
Preference number: 6 (lower is better)
Translates to: VLLRRGLCLTSS*LRHRECLCFIM
Trigger: CATAATGAAGCAAAGGCACTCCCTGTGCCTGAGCAAGGAGGAAGTCAGACACAGACCCCTCCTCAGAAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CAA 90 bp GGGTCTGTGTCTGACTTCCTCCTTGCTCAGGCACAGGGAGTGCCTTaGCTTCATTATGCACCAAATACCTCTGTTGAGCTGCCTCAGCTG +
Preference number: 6 (lower is better)
Translates to: GSVSDFLLAQAQGVP*LHYAPNTSVELPQL
Trigger: CAGCTGAGGCAGCTCAACAGAGGTATTTGGTGCATAATGAAGCAAAGGCACTCCCTGTGCCTGAGCAAGGAGGAAGTCAGACACAGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS TCA 72 bp CTGGGGATGCACTCCTGGTATAAAGCTTTCTGGAACTaGAGATGTTGGTCCCCCATACCTGGAGACGGTCCT +
Preference number: 6 (lower is better)
Translates to: LGMHSWYKAFWN*RCWSPIPGDGP
Trigger: AGGACCGTCTCCAGGTATGGGGGACCAACATCTTCAGTTCCAGAAAGCTTTATACCAGGAGTGCATCCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS TCA 72 bp GCTGAAACTGCTTCAGGTGCTGTTCCATGGTCTCAATaGTGCTCTTTGGCTGCCCATTGTCACGGCTTGGAG +
Preference number: 6 (lower is better)
Translates to: AETASGAVPWSQ*CSLAAHCHGLE
Trigger: CTCCAAGCCGTGACAATGGGCAGCCAAAGAGCATCATTGAGACCATGGAACAGCACCTGAAGCAGTTTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS GCA 72 bp GATAGCAGCCTGACTGCTAGGGGTGTTTACATGAGATaGGGTACTCTGCACGGCAATGGAGACACAATCTGG +
Preference number: 6 (lower is better)
Translates to: DSSLTARGVYMR*GTLHGNGDTIW
Trigger: CCAGATTGTGTCTCCATTGCCGTGCAGAGTACCGCATCTCATGTAAACACCCCTAGCAGTCAGGCTGCTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS GCA 72 bp AGGTGCTGTTCCATGGTCTCAATGATGCTCTTTGGCTaGCCATTGTCACGGCTTGGAGAGGAGATCTCTTGC +
Preference number: 6 (lower is better)
Translates to: RCCSMVSMMLFG*PLSRLGEEISC
Trigger: GCAAGAGATCTCCTCTCCAAGCCGTGACAATGGGCAGCCAAAGAGCATCATTGAGACCATGGAACAGCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CAA 72 bp ATCGTCGAGAACAGAACAATCTGTGCTTTTGGTTGCTaGAGGCTCTGCAGCTCGGGCGTGGTTCTCCGATTC +
Preference number: 6 (lower is better)
Translates to: IVENRTICAFGC*RLCSSGVVLRF
Trigger: GAATCGGAGAACCACGCCCGAGCTGCAGAGCCTCAAGCAACCAAAAGCACAGATTGTTCTGTTCTCGACGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CAA 72 bp ACTCTTGAGAGCCCATTGGCTATGTTGTCATTCTCCTaGTTGTGGAAGGCGTGGCTGGAACTGCTCCCCGAA +
Preference number: 6 (lower is better)
Translates to: TLESPLAMLSFS*LWKAWLELLPE
Trigger: TTCGGGGAGCAGTTCCAGCCACGCCTTCCACAACAAGGAGAATGACAACATAGCCAATGGGCTCTCAAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CAA 90 bp TCTGTAACTGCTGCTGCTGCTGCTGCTGGCAGATTTGAGGGAAATTaGAGTTCTGGGATGCTGGTGTTTGTGATGCCTGCGTCTGAGGAG +
Preference number: 6 (lower is better)
Translates to: SVTAAAAAAGRFEGN*SSGMLVFVMPASEE
Trigger: CTCCTCAGACGCAGGCATCACAAACACCAGCATCCCAGAACTCAAATTTCCCTCAAATCTGCCAGCAGCAGCAGCAGCAGCAGTTACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CAA 90 bp AGCACGTGGAACTGCTCATCCTCAGGCTTAGCTCCGACTTCTCGATaGTCTTCTCTATTGAGGGTGACCACCACTGTACTGCCATTTGGC +
Preference number: 6 (lower is better)
Translates to: STWNCSSSGLAPTSR*SSLLRVTTTVLPFG
Trigger: GCCAAATGGCAGTACAGTGGTGGTCACCCTCAATAGAGAAGACAATCGAGAAGTCGGAGCTAAGCCTGAGGATGAGCAGTTCCACGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CAA 90 bp TGGTCGAGGTCACGGGCTCTCCATTATCACTTAGTCCGGAGACATTaGGCTGACGGCTGCTTTTACCGTGGTTTCTTTCTTGGCTTTCCT +
Preference number: 6 (lower is better)
Translates to: WSRSRALHYHLVRRH*ADGCFYRGFFLGFP
Trigger: AGGAAAGCCAAGAAAGAAACCACGGTAAAAGCAGCCGTCAGCCAAATGTCTCCGGACTAAGTGATAATGGAGAGCCCGTGACCTCGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CAA 90 bp TTTCTGGAACTGAAGATGTTGGTCCCCCATACCTGGAGACGGTCCTaGGTTCACTTGCACTTGGTACATTTGTGCCTTCTGCTCTGGCTG +
Preference number: 6 (lower is better)
Translates to: FLELKMLVPHTWRRS*VHLHLVHLCLLLWL
Trigger: CAGCCAGAGCAGAAGGCACAAATGTACCAAGTGCAAGTGAACCAAGGACCGTCTCCAGGTATGGGGGACCAACATCTTCAGTTCCAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CAA 90 bp CTTCTGAGTGTCCTTCTGAGGAGGGGTCTGTGTCTGACTTCCTCCTaGCTCAGGCACAGGGAGTGCCTTTGCTTCATTATGCACCAAATA +
Preference number: 6 (lower is better)
Translates to: LLSVLLRRGLCLTSS*LRHRECLCFIMHQI
Trigger: TATTTGGTGCATAATGAAGCAAAGGCACTCCCTGTGCCTGAGCAAGGAGGAAGTCAGACACAGACCCCTCCTCAGAAGGACACTCAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CAA 90 bp TTCAGGTGCTGTTCCATGGTCTCAATGATGCTCTTTGGCTGCCCATaGTCACGGCTTGGAGAGGAGATCTCTTGCTTTATCCTGCTGGAC +
Preference number: 6 (lower is better)
Translates to: FRCCSMVSMMLFGCP*SRLGEEISCFILLD
Trigger: GTCCAGCAGGATAAAGCAAGAGATCTCCTCTCCAAGCCGTGACAATGGGCAGCCAAAGAGCATCATTGAGACCATGGAACAGCACCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CAA 90 bp TGCTCATCCTCAGGCTTAGCTCCGACTTCTCGATTGTCTTCTCTATaGAGGGTGACCACCACTGTACTGCCATTTGGCATGTTCTGCTGG +
Preference number: 6 (lower is better)
Translates to: CSSSGLAPTSRLSSL*RVTTTVLPFGMFCW
Trigger: CCAGCAGAACATGCCAAATGGCAGTACAGTGGTGGTCACCCTCAATAGAGAAGACAATCGAGAAGTCGGAGCTAAGCCTGAGGATGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS GCA 72 bp ATGCAAATTCGGGGCTTTCAGTTCTATCCAGCCAGGTaGTGCCTGTACAGAGCCTTGCGTTTGTTTCCCGTT +
Preference number: 6 (lower is better)
Translates to: MQIRGFQFYPAR*CLYRALRLFPV
Trigger: AACGGGAAACAAACGCAAGGCTCTGTACAGGCAGCACCTGGCTGGATAGAACTGAAAGCCCCGAATTTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS GCA 72 bp AGACGGTCCTTGGTTCACTTGCACTTGGTACATTTGTaGCTTCTGCTCTGGCTGGGCTGTTTTCTGGAGGTA +
Preference number: 6 (lower is better)
Translates to: RRSLVHLHLVHL*LLLWLGCFLEV
Trigger: TACCTCCAGAAAACAGCCCAGCCAGAGCAGAAGGCACAAATGTACCAAGTGCAAGTGAACCAAGGACCGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS GCA 72 bp GGCTGCCCATTGTCACGGCTTGGAGAGGAGATCTCTTaGTTTATCCTGCTGGACATATTTTCTTGTGGCGGT +
Preference number: 6 (lower is better)
Translates to: GCPLSRLGEEIS*FILLDIFSCGG
Trigger: ACCGCCACAAGAAAATATGTCCAGCAGGATAAAGCAAGAGATCTCCTCTCCAAGCCGTGACAATGGGCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS GCA 72 bp GTTCCTGTGGCCCTGTGGGCTCACGCTTTTCCTGTTTaGCATGATTTTTCTGAGACACGTGGTCTGATCCAT +
Preference number: 6 (lower is better)
Translates to: VPVALWAHAFPV*HDFSETRGLIH
Trigger: ATGGATCAGACCACGTGTCTCAGAAAAATCATGGCAAACAGGAAAAGCGTGAGCCCACAGGGCCACAGGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CCA 72 bp TCCTGGTGGGGTGATTCCGGTCGGGATCGTTTACTTTaGTTGTGGCATGAACCTCACACTTTGCACACTCAA +
Preference number: 6 (lower is better)
Translates to: SWWGDSGRDRLL*LWHEPHTLHTQ
Trigger: TTGAGTGTGCAAAGTGTGAGGTTCATGCCACAACCAAAGTAAACGATCCCGACCGGAATCACCCCACCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CAA 72 bp CTGAAGATGTTGGTCCCCCATACCTGGAGACGGTCCTaGGTTCACTTGCACTTGGTACATTTGTGCCTTCTG +
Preference number: 6 (lower is better)
Translates to: LKMLVPHTWRRS*VHLHLVHLCLL
Trigger: CAGAAGGCACAAATGTACCAAGTGCAAGTGAACCAAGGACCGTCTCCAGGTATGGGGGACCAACATCTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CAA 72 bp TGGCTGCCCATTGTCACGGCTTGGAGAGGAGATCTCTaGCTTTATCCTGCTGGACATATTTTCTTGTGGCGG +
Preference number: 6 (lower is better)
Translates to: WLPIVTAWRGDL*LYPAGHIFLWR
Trigger: CCGCCACAAGAAAATATGTCCAGCAGGATAAAGCAAGAGATCTCCTCTCCAAGCCGTGACAATGGGCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CAA 72 bp TTGGCTTTCTTGGGCTCCGCTTTCTTCTTGCAACTCTaGGGCAGCTCTCCTATCCTTATGACCCTTCTCCTC +
Preference number: 6 (lower is better)
Translates to: LAFLGSAFFLQL*GSSPILMTLLL
Trigger: GAGGAGAAGGGTCATAAGGATAGGAGAGCTGCCCAAGAGTTGCAAGAAGAAAGCGGAGCCCAAGAAAGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS TCA 72 bp CACCTGGAATACCCTCTGTCTTCATGTGGACTCTCATaGCTGCTCTGGCTGCCTTTCATGTGGGATATTCCA +
Preference number: 6 (lower is better)
Translates to: HLEYPLSSCGLS*LLWLPFMWDIP
Trigger: TGGAATATCCCACATGAAAGGCAGCCAGAGCAGTCATGAGAGTCCACATGAAGACAGAGGGTATTCCAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS TCA 72 bp CAGCTCTCCTATCCTTATGACCCTTCTCCTCCGAAATaGCTGCAGAACCTCAATGGACCCCATCCGTATCTT +
Preference number: 6 (lower is better)
Translates to: QLSYPYDPSPPK*LQNLNGPHPYL
Trigger: AAGATACGGATGGGGTCCATTGAGGTTCTGCAGTCATTTCGGAGGAGAAGGGTCATAAGGATAGGAGAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CCA 72 bp AGCTTTCTGGAACTGAAGATGTTGGTCCCCCATACCTaGAGACGGTCCTTGGTTCACTTGCACTTGGTACAT +
Preference number: 6 (lower is better)
Translates to: SFLELKMLVPHT*RRSLVHLHLVH
Trigger: ATGTACCAAGTGCAAGTGAACCAAGGACCGTCTCCAGGTATGGGGGACCAACATCTTCAGTTCCAGAAAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CCA 72 bp CTCAATGATGCTCTTTGGCTGCCCATTGTCACGGCTTaGAGAGGAGATCTCTTGCTTTATCCTGCTGGACAT +
Preference number: 6 (lower is better)
Translates to: LNDALWLPIVTA*RGDLLLYPAGH
Trigger: ATGTCCAGCAGGATAAAGCAAGAGATCTCCTCTCCAAGCCGTGACAATGGGCAGCCAAAGAGCATCATTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CCA 72 bp AGCTGTAGATCGTGTGAGAGGGTAGATGATGCTCACTaGTTTTGTAGTCAGTGTGTGGGTGGCTGTATGGTG +
Preference number: 6 (lower is better)
Translates to: SCRSCERVDDAH*FCSQCVGGCMV
Trigger: CACCATACAGCCACCCACACACTGACTACAAAACCAGTGAGCATCATCTACCCTCTCACACGATCTACAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CAA 72 bp TTGCGTTTGTTTCCCGTTTGCATCCTTCGGAATCTCTaGCTCCCTGTGCCCCATCAGGTATTGGCTATGTTC +
Preference number: 6 (lower is better)
Translates to: LRLFPVCILRNL*LPVPHQVLAMF
Trigger: GAACATAGCCAATACCTGATGGGGCACAGGGAGCAAGAGATTCCGAAGGATGCAAACGGGAAACAAACGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CAA 72 bp AACTGCTCATCCTCAGGCTTAGCTCCGACTTCTCGATaGTCTTCTCTATTGAGGGTGACCACCACTGTACTG +
Preference number: 6 (lower is better)
Translates to: NCSSSGLAPTSR*SSLLRVTTTVL
Trigger: CAGTACAGTGGTGGTCACCCTCAATAGAGAAGACAATCGAGAAGTCGGAGCTAAGCCTGAGGATGAGCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CAA 72 bp TTCTTGGTCTTGGCTTTCTTGGGCTCCGCTTTCTTCTaGCAACTCTTGGGCAGCTCTCCTATCCTTATGACC +
Preference number: 6 (lower is better)
Translates to: FLVLAFLGSAFF*QLLGSSPILMT
Trigger: GGTCATAAGGATAGGAGAGCTGCCCAAGAGTTGCAAGAAGAAAGCGGAGCCCAAGAAAGCCAAGACCAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS TCA 72 bp TCTTGTTTGGATGGAGCCCAGAGAGAGATGGTTCACTaGCTGTGCGTTTTATCCCTCCATTCTGTAAGCACC +
Preference number: 6 (lower is better)
Translates to: SCLDGAQREMVH*LCVLSLHSVST
Trigger: GGTGCTTACAGAATGGAGGGATAAAACGCACAGTCAGTGAACCATCTCTCTCTGGGCTCCATCCAAACAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS TCA 72 bp GGCTCTCCATTATCACTTAGTCCGGAGACATTTGGCTaGCGGCTGCTTTTACCGTGGTTTCTTTCTTGGCTT +
Preference number: 6 (lower is better)
Translates to: GSPLSLSPETFG*RLLLPWFLSWL
Trigger: AAGCCAAGAAAGAAACCACGGTAAAAGCAGCCGTCAGCCAAATGTCTCCGGACTAAGTGATAATGGAGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS TCA 72 bp TCTTCTTGCAACTCTTGGGCAGCTCTCCTATCCTTATaGCCCTTCTCCTCCGAAATGACTGCAGAACCTCAA +
Preference number: 6 (lower is better)
Translates to: SSCNSWAALLSL*PFSSEMTAEPQ
Trigger: TTGAGGTTCTGCAGTCATTTCGGAGGAGAAGGGTCATAAGGATAGGAGAGCTGCCCAAGAGTTGCAAGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS TCA 72 bp GGTGAAGGGTGTGGATGGGTGGTAAGTTCTGATTGGTaGGATGGTCCTGGTTTGGATATCTATGTAGATCCC +
Preference number: 6 (lower is better)
Translates to: GEGCGWVVSSDW*DGPGLDIYVDP
Trigger: GGGATCTACATAGATATCCAAACCAGGACCATCTCACCAATCAGAACTTACCACCCATCCACACCCTTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
ENSMUST00000198974.2
CDS TCA 72 bp TTATGCCTATACAGTACAAGTGAGATCCTGGTGGGGTaGTTCCGGTCGGGATCGTTTACTTTGGTTGTGGCA +
Preference number: 6 (lower is better)
Translates to: LCLYSTSEILVG*FRSGSFTLVVA
Trigger: TGCCACAACCAAAGTAAACGATCCCGACCGGAATCACCCCACCAGGATCTCACTTGTACTGTATAGGCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS TCA 72 bp GAAAAGGAGGCACCACAGGTCTCTGGATTCTCACCCTaGCAACAACAGTTTCTACTGGGTGGTGATTGCTTT +
Preference number: 6 (lower is better)
Translates to: EKEAPQVSGFSP*QQQFLLGGDCF
Trigger: AAAGCAATCACCACCCAGTAGAAACTGTTGTTGTCAGGGTGAGAATCCAGAGACCTGTGGTGCCTCCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196398.5
CDS GCA 72 bp CTCTGTCTTCATGTGGACTCTCATGACTGCTCTGGCTaGCTTTCATGTGGGATATTCCATAACAGCTTTGGG +
Preference number: 6 (lower is better)
Translates to: LCLHVDSHDCSG*LSCGIFHNSFG
Trigger: CCCAAAGCTGTTATGGAATATCCCACATGAAAGGCAGCCAGAGCAGTCATGAGAGTCCACATGAAGACAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS GCA 72 bp TTCCCGTTTGCATCCTTCGGAATCTCTTGCTCCCTGTaGCCCATCAGGTATTGGCTATGTTCTTGTAAACCT +
Preference number: 6 (lower is better)
Translates to: FPFASFGISCSL*PIRYWLCSCKP
Trigger: AGGTTTACAAGAACATAGCCAATACCTGATGGGGCACAGGGAGCAAGAGATTCCGAAGGATGCAAACGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CCA 72 bp CGCTTGTTCCTGAAAGCACCGGTGAACGTCCTGATTTaGGGTCACATTATTCGGGAAATACTGCATGTTCTG +
Preference number: 6 (lower is better)
Translates to: RLFLKAPVNVLI*GHIIREILHVL
Trigger: CAGAACATGCAGTATTTCCCGAATAATGTGACCCCAAATCAGGACGTTCACCGGTGCTTTCAGGAACAAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CAA 72 bp GATGACCGGGCCCGAAAGCTGCGGTTGTGCTGTCATTaGTTTCATATGGCTTGCATTTTCCATCAGCTTTGT +
Preference number: 6 (lower is better)
Translates to: DDRARKLRLCCH*FHMACIFHQLC
Trigger: ACAAAGCTGATGGAAAATGCAAGCCATATGAAACAAATGACAGCACAACCGCAGCTTTCGGGCCCGGTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CAA 90 bp CTGGCTGCCTTTCATGTGGGATATTCCATAACAGCTTTGGGAAGATaGCCACTTGGTGTCTCCATTTACTTCTGGATGAGGTCTCTCTGC +
Preference number: 6 (lower is better)
Translates to: LAAFHVGYSITALGR*PLGVSIYFWMRSLC
Trigger: GCAGAGAGACCTCATCCAGAAGTAAATGGAGACACCAAGTGGCAATCTTCCCAAAGCTGTTATGGAATATCCCACATGAAAGGCAGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CAA 90 bp CGGGATGTAGAGCTTGTTCCCGCTCACAAGCCGGGTGTGTGTCATTaGAAGGGAGAATCTGTAAGTTGCTCGAATTTGGTGTTAAGATCT +
Preference number: 6 (lower is better)
Translates to: RDVELVPAHKPGVCH*KGESVSCSNLVLRS
Trigger: AGATCTTAACACCAAATTCGAGCAACTTACAGATTCTCCCTTCAAATGACACACACCCGGCTTGTGAGCGGGAACAAGCTCTACATCCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CAA 90 bp ATGACTGCTCTGGCTGCCTTTCATGTGGGATATTCCATAACAGCTTaGGGAAGATTGCCACTTGGTGTCTCCATTTACTTCTGGATGAGG +
Preference number: 6 (lower is better)
Translates to: MTALAAFHVGYSITA*GRLPLGVSIYFWMR
Trigger: CCTCATCCAGAAGTAAATGGAGACACCAAGTGGCAATCTTCCCAAAGCTGTTATGGAATATCCCACATGAAAGGCAGCCAGAGCAGTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CAA 90 bp TCCGGAGACATTTGGCTGACGGCTGCTTTTACCGTGGTTTCTTTCTaGGCTTTCCTCGAAGATATTGCTTTCTCCCTTAGCTTTTTGGTC +
Preference number: 6 (lower is better)
Translates to: SGDIWLTAAFTVVSF*AFLEDIAFSLSFLV
Trigger: GACCAAAAAGCTAAGGGAGAAAGCAATATCTTCGAGGAAAGCCAAGAAAGAAACCACGGTAAAAGCAGCCGTCAGCCAAATGTCTCCGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS TCA 72 bp ATGATGGCAATTACCATCACCGCCGTCTCACATGTGTaGTTAGGTCGCACTCGTACCAAACACAGTAGTTTC +
Preference number: 6 (lower is better)
Translates to: MMAITITAVSHV*LGRTRTKHSSF
Trigger: GAAACTACTGTGTTTGGTACGAGTGCGACCTAATCACACATGTGAGACGGCGGTGATGGTAATTGCCATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS TCA 72 bp ACCTCACACTTTGCACACTCAATAAGAATTGACCCATaGGTTGGAGCTATAGCCACCCCTCCAATGCAAGGA +
Preference number: 6 (lower is better)
Translates to: TSHFAHSIRIDP*VGAIATPPMQG
Trigger: TCCTTGCATTGGAGGGGTGGCTATAGCTCCAACTCATGGGTCAATTCTTATTGAGTGTGCAAAGTGTGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS TCA 72 bp GGCATGAACCTCACACTTTGCACACTCAATAAGAATTaGCCCATGAGTTGGAGCTATAGCCACCCCTCCAAT +
Preference number: 6 (lower is better)
Translates to: GMNLTLCTLNKN*PMSWSYSHPSN
Trigger: ATTGGAGGGGTGGCTATAGCTCCAACTCATGGGTCAATTCTTATTGAGTGTGCAAAGTGTGAGGTTCATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS TCA 72 bp CTACTGGGTGGTGATTGCTTTTTCTTCGTTTCATTCTaGGAACAGCGACGGTTGGTGCATATGCCACACTTG +
Preference number: 6 (lower is better)
Translates to: LLGGDCFFFVSF*EQRRLVHMPHL
Trigger: CAAGTGTGGCATATGCACCAACCGTCGCTGTTCTCAGAATGAAACGAAGAAAAAGCAATCACCACCCAGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000196398.5
CDS GCA 72 bp CATTATCACTTAGTCCGGAGACATTTGGCTGACGGCTaGTTTTACCGTGGTTTCTTTCTTGGCTTTCCTCGA +
Preference number: 6 (lower is better)
Translates to: HYHLVRRHLADG*FYRGFFLGFPR
Trigger: TCGAGGAAAGCCAAGAAAGAAACCACGGTAAAAGCAGCCGTCAGCCAAATGTCTCCGGACTAAGTGATAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CCA 72 bp TTTTCCAGGAGTTCACCACGTGTGTTCTCCTCAGAATaGGCAGAAACTGTAGCACCATTAGGCATTAGCACA +
Preference number: 6 (lower is better)
Translates to: FSRSSPRVFSSE*AETVAPLGIST
Trigger: TGTGCTAATGCCTAATGGTGCTACAGTTTCTGCCCATTCTGAGGAGAACACACGTGGTGAACTCCTGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CCA 72 bp ATAGGAAGAAGGTTTGGATACAGGCTCAGTCTTGATTaGCCTAAGCATCTGGTTATGACCAGGCTGGGATTG +
Preference number: 6 (lower is better)
Translates to: IGRRFGYRLSLD*PKHLVMTRLGL
Trigger: CAATCCCAGCCTGGTCATAACCAGATGCTTAGGCCAATCAAGACTGAGCCTGTATCCAAACCTTCTTCCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS TCA 72 bp GGGTGTATGTACAGATGGATTCAGACTCTGGCTAGATaGTGTCTTGGGTTGATGGTCTATTTTCCCTTCCCT +
Preference number: 6 (lower is better)
Translates to: GCMYRWIQTLAR*CLGLMVYFPFP
Trigger: AGGGAAGGGAAAATAGACCATCAACCCAAGACATCATCTAGCCAGAGTCTGAATCCATCTGTACATACACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS TCA 72 bp TCCAATGCAAGGATCCTGAAAGTTGTGCTCACTATCTaGCCAATACTCAATTTCCTGCACAGCAGCTGCATC +
Preference number: 6 (lower is better)
Translates to: SNARILKVVLTI*PILNFLHSSCI
Trigger: GATGCAGCTGCTGTGCAGGAAATTGAGTATTGGTCAGATAGTGAGCACAACTTTCAGGATCCTTGCATTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CCA 72 bp GGGATATTCCATAACAGCTTTGGGAAGATTGCCACTTaGTGTCTCCATTTACTTCTGGATGAGGTCTCTCTG +
Preference number: 6 (lower is better)
Translates to: GIFHNSFGKIAT*CLHLLLDEVSL
Trigger: CAGAGAGACCTCATCCAGAAGTAAATGGAGACACCAAGTGGCAATCTTCCCAAAGCTGTTATGGAATATCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CCA 72 bp AATTCTTATGCCTATACAGTACAAGTGAGATCCTGGTaGGGTGATTCCGGTCGGGATCGTTTACTTTGGTTG +
Preference number: 6 (lower is better)
Translates to: NSYAYTVQVRSW*GDSGRDRLLWL
Trigger: CAACCAAAGTAAACGATCCCGACCGGAATCACCCCACCAGGATCTCACTTGTACTGTATAGGCATAAGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CCA 72 bp ACAAATTCTTATGCCTATACAGTACAAGTGAGATCCTaGTGGGGTGATTCCGGTCGGGATCGTTTACTTTGG +
Preference number: 6 (lower is better)
Translates to: TNSYAYTVQVRS*WGDSGRDRLLW
Trigger: CCAAAGTAAACGATCCCGACCGGAATCACCCCACCAGGATCTCACTTGTACTGTATAGGCATAAGAATTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CAA 72 bp CTGGCTGCCTTTCATGTGGGATATTCCATAACAGCTTaGGGAAGATTGCCACTTGGTGTCTCCATTTACTTC +
Preference number: 6 (lower is better)
Translates to: LAAFHVGYSITA*GRLPLGVSIYF
Trigger: GAAGTAAATGGAGACACCAAGTGGCAATCTTCCCAAAGCTGTTATGGAATATCCCACATGAAAGGCAGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS TCA 72 bp GATGGATTCAGACTCTGGCTAGATGATGTCTTGGGTTaGTGGTCTATTTTCCCTTCCCTTAAAAGAGTTCGG +
Preference number: 6 (lower is better)
Translates to: DGFRLWLDDVLG*WSIFPSLKRVR
Trigger: CCGAACTCTTTTAAGGGAAGGGAAAATAGACCATCAACCCAAGACATCATCTAGCCAGAGTCTGAATCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS GCA 72 bp TTTGGGGTCACATTATTCGGGAAATACTGCATGTTCTaGAGGTTTGAGGTCTTACTTCCTACGGGATGTAGA +
Preference number: 6 (lower is better)
Translates to: FGVTLFGKYCMF*RFEVLLPTGCR
Trigger: TCTACATCCCGTAGGAAGTAAGACCTCAAACCTGCAGAACATGCAGTATTTCCCGAATAATGTGACCCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CCA 72 bp TGCTTTCTGAAAAGGACAGGTACCTGGTACTATAGCTaGTTTACTGGCATTATCAGCATCACAGGCCTTAGT +
Preference number: 6 (lower is better)
Translates to: CFLKRTGTWYYS*FTGIISITGLS
Trigger: ACTAAGGCCTGTGATGCTGATAATGCCAGTAAACCAGCTATAGTACCAGGTACCTGTCCTTTTCAGAAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CCA 72 bp AGTATTCTTCAGCAAATAGCTCCATGCTTCCTTGGATaGTTTTGTTTTCTGCACGAGATGGGCCTATGTCCA +
Preference number: 6 (lower is better)
Translates to: SILQQIAPCFLG*FCFLHEMGLCP
Trigger: TGGACATAGGCCCATCTCGTGCAGAAAACAAAACCATCCAAGGAAGCATGGAGCTATTTGCTGAAGAATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CCA 72 bp AGGCATGAGATGAAGTGGGGTAAAAGTTCACATGGTTaGTATCTCCATAAATATCTGAGGTGTGTGCTGAGC +
Preference number: 6 (lower is better)
Translates to: RHEMKWGKSSHG*YLHKYLRCVLS
Trigger: GCTCAGCACACACCTCAGATATTTATGGAGATACCAACCATGTGAACTTTTACCCCACTTCATCTCATGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CAA 72 bp AGTGGGAGAGATGGAATCTTTAGGGAACTTCGAGCTTaGCCTGAAGTAAGCACCATTGGTTTCCTTTTGCTT +
Preference number: 6 (lower is better)
Translates to: SGRDGIFRELRA*PEVSTIGFLLL
Trigger: AAGCAAAAGGAAACCAATGGTGCTTACTTCAGGCAAAGCTCGAAGTTCCCTAAAGATTCCATCTCTCCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CAA 72 bp TTGACTCAAATGCTTATCACTGGAGGGATTTACTCTTaGCTGGAAATGATACTGAGGAACGCTCGGTGCTTG +
Preference number: 6 (lower is better)
Translates to: LTQMLITGGIYS*LEMILRNARCL
Trigger: CAAGCACCGAGCGTTCCTCAGTATCATTTCCAGCAAAGAGTAAATCCCTCCAGTGATAAGCATTTGAGTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CAA 90 bp AATCTGGCCAAAGCACGAGCCTTCTCTTTGCTTATCATTGCTACCTaGGAGATGAGAGAAAGTCTGAGGCATTTGCTCTTTATTCTTCCT +
Preference number: 6 (lower is better)
Translates to: NLAKARAFSLLIIAT*EMRESLRHLLFILP
Trigger: AGGAAGAATAAAGAGCAAATGCCTCAGACTTTCTCTCATCTCCAAGGTAGCAATGATAAGCAAAGAGAAGGCTCGTGCTTTGGCCAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CAA 90 bp GTTGTGCTGTCATTTGTTTCATATGGCTTGCATTTTCCATCAGCTTaGTATGTGAGGAAGACTTTCCCTTCTCAGTCCTACTGGAGCAGT +
Preference number: 6 (lower is better)
Translates to: VVLSFVSYGLHFPSA*YVRKTFPSQSYWSS
Trigger: ACTGCTCCAGTAGGACTGAGAAGGGAAAGTCTTCCTCACATACAAAGCTGATGGAAAATGCAAGCCATATGAAACAAATGACAGCACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS TCA 72 bp TTGCTTTATCCTGCTGGACATATTTTCTTGTGGCGGTaGCAAGGGGTATCTATAGGAAGAAGGTTTGGATAC +
Preference number: 6 (lower is better)
Translates to: LLYPAGHIFLWR*QGVSIGRRFGY
Trigger: GTATCCAAACCTTCTTCCTATAGATACCCCTTGTCACCGCCACAAGAAAATATGTCCAGCAGGATAAAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS TCA 72 bp AAACAGCAGTCTGGGGCTTGGTGTTCAAATTCAACCTaGTTATTGTATGCATCGGGTGCAAGCTTCTTGTAT +
Preference number: 6 (lower is better)
Translates to: KQQSGAWCSNST*LLYASGASFLY
Trigger: ATACAAGAAGCTTGCACCCGATGCATACAATAATCAGGTTGAATTTGAACACCAAGCCCCAGACTGCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS TCA 72 bp TTTCATATGGCTTGCATTTTCCATCAGCTTTGTATGTaGGGAAGACTTTCCCTTCTCAGTCCTACTGGAGCA +
Preference number: 6 (lower is better)
Translates to: FHMACIFHQLCM*GRLSLLSPTGA
Trigger: TGCTCCAGTAGGACTGAGAAGGGAAAGTCTTCCTCACATACAAAGCTGATGGAAAATGCAAGCCATATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS TCA 72 bp AGCAGTTCTATCATGATTAAACCCTGGAAGCACTCTTaGGAGCCCATTGGCTATGTTGTCATTCTCCTTGTT +
Preference number: 6 (lower is better)
Translates to: SSSIMIKPWKHS*EPIGYVVILLV
Trigger: AACAAGGAGAATGACAACATAGCCAATGGGCTCTCAAGAGTGCTTCCAGGGTTTAATCATGATAGAACTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CCA 72 bp TCTCTGGATTCTCACCCTGACAACAACAGTTTCTACTaGGTGGTGATTGCTTTTTCTTCGTTTCATTCTGAG +
Preference number: 6 (lower is better)
Translates to: SLDSHPDNNSFY*VVIAFSSFHSE
Trigger: CTCAGAATGAAACGAAGAAAAAGCAATCACCACCCAGTAGAAACTGTTGTTGTCAGGGTGAGAATCCAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000196398.5
CDS CAA 72 bp TTTCATGTGGGATATTCCATAACAGCTTTGGGAAGATaGCCACTTGGTGTCTCCATTTACTTCTGGATGAGG +
Preference number: 6 (lower is better)
Translates to: FHVGYSITALGR*PLGVSIYFWMR
Trigger: CCTCATCCAGAAGTAAATGGAGACACCAAGTGGCAATCTTCCCAAAGCTGTTATGGAATATCCCACATGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CAA 72 bp CTTTCTCCCTTAGCTTTTTGGTCTAGTTTCAATATCTaGTTTGGATGGAGCCCAGAGAGAGATGGTTCACTG +
Preference number: 6 (lower is better)
Translates to: LSPLAFWSSFNI*FGWSPERDGSL
Trigger: CAGTGAACCATCTCTCTCTGGGCTCCATCCAAACAAGATATTGAAACTAGACCAAAAAGCTAAGGGAGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CAA 72 bp TCACATTATTCGGGAAATACTGCATGTTCTGCAGGTTaGAGGTCTTACTTCCTACGGGATGTAGAGCTTGTT +
Preference number: 6 (lower is better)
Translates to: SHYSGNTACSAG*RSYFLRDVELV
Trigger: AACAAGCTCTACATCCCGTAGGAAGTAAGACCTCAAACCTGCAGAACATGCAGTATTTCCCGAATAATGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CAA 90 bp AAGATATTGCTTTCTCCCTTAGCTTTTTGGTCTAGTTTCAATATCTaGTTTGGATGGAGCCCAGAGAGAGATGGTTCACTGACTGTGCGT +
Preference number: 6 (lower is better)
Translates to: KILLSPLAFWSSFNI*FGWSPERDGSLTVR
Trigger: ACGCACAGTCAGTGAACCATCTCTCTCTGGGCTCCATCCAAACAAGATATTGAAACTAGACCAAAAAGCTAAGGGAGAAAGCAATATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CAA 90 bp GGGCCTTTTCAGCCATTTTGGCTTCCCAGAGAGCCAAACAATGTTTaGGTAGAAACAAATTCTTATGCCTATACAGTACAAGTGAGATCC +
Preference number: 6 (lower is better)
Translates to: GPFQPFWLPREPNNV*VETNSYAYTVQVRS
Trigger: GGATCTCACTTGTACTGTATAGGCATAAGAATTTGTTTCTACCAAAACATTGTTTGGCTCTCTGGGAAGCCAAAATGGCTGAAAAGGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS GCA 72 bp CCGGGTGTGTGTCATTTGAAGGGAGAATCTGTAAGTTaGTCGAATTTGGTGTTAAGATCTTCGAATAAGGAA +
Preference number: 6 (lower is better)
Translates to: PGVCHLKGESVS*SNLVLRSSNKE
Trigger: TTCCTTATTCGAAGATCTTAACACCAAATTCGAGCAACTTACAGATTCTCCCTTCAAATGACACACACCCGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CCA 72 bp AGGGGAACCATTGTCCACTGGCACACTCCCATTGTATaGAAAAGGTGCATATTGGTTATTCTGATTATTGTA +
Preference number: 6 (lower is better)
Translates to: RGTIVHWHTPIV*KRCILVILIIV
Trigger: TACAATAATCAGAATAACCAATATGCACCTTTTCCATACAATGGGAGTGTGCCAGTGGACAATGGTTCCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000198974.2
CDS CAA 90 bp CGGCTGCTTTTACCGTGGTTTCTTTCTTGGCTTTCCTCGAAGATATaGCTTTCTCCCTTAGCTTTTTGGTCTAGTTTCAATATCTTGTTT +
Preference number: 6 (lower is better)
Translates to: RLLLPWFLSWLSSKI*LSPLAFWSSFNILF
Trigger: AAACAAGATATTGAAACTAGACCAAAAAGCTAAGGGAGAAAGCAATATCTTCGAGGAAAGCCAAGAAAGAAACCACGGTAAAAGCAGCCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS GCA 72 bp GTGTTCAAATTCAACCTGATTATTGTATGCATCGGGTaGAAGCTTCTTGTATATTGGAGCAATGACAGTAGC +
Preference number: 6 (lower is better)
Translates to: VFKFNLIIVCIG*KLLVYWSNDSS
Trigger: GCTACTGTCATTGCTCCAATATACAAGAAGCTTGCACCCGATGCATACAATAATCAGGTTGAATTTGAACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CCA 72 bp AAGGATTCAAATATGAACCCGAGGCATGAGATGAAGTaGGGTAAAAGTTCACATGGTTGGTATCTCCATAAA +
Preference number: 6 (lower is better)
Translates to: KDSNMNPRHEMK*GKSSHGWYLHK
Trigger: TTTATGGAGATACCAACCATGTGAACTTTTACCCCACTTCATCTCATGCCTCGGGTTCATATTTGAATCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS CAA 72 bp TCATTTGTTTCATATGGCTTGCATTTTCCATCAGCTTaGTATGTGAGGAAGACTTTCCCTTCTCAGTCCTAC +
Preference number: 6 (lower is better)
Translates to: SFVSYGLHFPSA*YVRKTFPSQSY
Trigger: GTAGGACTGAGAAGGGAAAGTCTTCCTCACATACAAAGCTGATGGAAAATGCAAGCCATATGAAACAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5
CDS TCA 72 bp CTCCCATTGTATGGAAAAGGTGCATATTGGTTATTCTaGTTATTGTATGCATCGGGTGCAAGCTTCTTGTAT +
Preference number: 6 (lower is better)
Translates to: LPLYGKGAYWLF*LLYASGASFLY
Trigger: ATACAAGAAGCTTGCACCCGATGCATACAATAATCAGAATAACCAATATGCACCTTTTCCATACAATGGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000198974.2
CDS CAA 72 bp TTACCGTGGTTTCTTTCTTGGCTTTCCTCGAAGATATaGCTTTCTCCCTTAGCTTTTTGGTCTAGTTTCAAT +
Preference number: 6 (lower is better)
Translates to: LPWFLSWLSSKI*LSPLAFWSSFN
Trigger: ATTGAAACTAGACCAAAAAGCTAAGGGAGAAAGCAATATCTTCGAGGAAAGCCAAGAAAGAAACCACGGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098603.8
ENSMUST00000196398.5