Pregenerated sensors for TESPA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034833Ensembl transcript IDs: ENSMUST00000042586.10, ENSMUST00000217702.2
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCGGATCCAGTGCATCCTaGAGAGCTGCTGCTGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: NISTCTFHEKLSSHLLQIGSSAS*RAAAAS Trigger: GGAAGCAGCAGCAGCTCTTCAGGATGCACTGGATCC...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS-3UTR GCA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCAGGCTCGGGATCCAGTaGATCCTGAAGAGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: NISTCTFHEKLSSHLLQIRLGIQ*ILKSCC Trigger: GCAGCAGCTCTTCAGGATGCACTGGATCCCGAGCCT...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS-3UTR GCA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCGTGACAGCCAGCGTCTaGACCTGCTTAAACCGGCTG | + |
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Preference number: 4 (lower is better) Translates to: NISTCTFHEKLSSHLLQIVTASV*TCLNRL Trigger: CAGCCGGTTTAAGCAGGTGCAGACGCTGGCTGTCAC...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS-3UTR TCA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCAGAAAGCATCAGCAGTaGCAGCCAGCGTCTGCACCT | + |
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Preference number: 4 (lower is better) Translates to: NISTCTFHEKLSSHLLQIRKHQQ*QPASAP Trigger: AGGTGCAGACGCTGGCTGTCACTGCTGATGCTTTCT...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS-3UTR TCA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCCTGGAGCCAGAATCCTaGTGGATGGCACATCCGTTG | + |
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Preference number: 4 (lower is better) Translates to: NISTCTFHEKLSSHLLQILEPES*WMAHPL Trigger: CAACGGATGTGCCATCCATCAGGATTCTGGCTCCAG...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS-3UTR TCA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCGGTCTTGCTAGAGCATaGGCATGGCACATGTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: NISTCTFHEKLSSHLLQIGLARA*AWHMSP Trigger: GGGAGACATGTGCCATGCTCATGCTCTAGCAAGACC...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS-3UTR GCA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCCTGAAGAGCTGCTGCTaGTTCCTCTTCCAGGACCTG | + |
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Preference number: 4 (lower is better) Translates to: NISTCTFHEKLSSHLLQILKSCC*FLFQDL Trigger: CAGGTCCTGGAAGAGGAAGCAGCAGCAGCTCTTCAG...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS-3UTR GCA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCTCTTCCCCAAGGGCTTaGCTATGCTCAGGGTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: NISTCTFHEKLSSHLLQISSPRA*LCSGSC Trigger: GCAAGACCCTGAGCATAGGCAAGCCCTTGGGGAAGA...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS-3UTR CCA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCGTTTCTCCCAGGATGTaGGGCTCAGTACCGATGCCT | + |
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Preference number: 4 (lower is better) Translates to: NISTCTFHEKLSSHLLQIVSPRM*GSVPMP Trigger: AGGCATCGGTACTGAGCCCCACATCCTGGGAGAAAC...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS-3UTR GCA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCTCCAGGACCTGGGTTTaGCAGTTACGACTCTGTCGT | + |
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Preference number: 4 (lower is better) Translates to: NISTCTFHEKLSSHLLQISRTWV*QLRLCR Trigger: ACGACAGAGTCGTAACTGGCAAACCCAGGTCCTGGA...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS-3UTR GCA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCATCCTGAAGAGCTGCTaGTGCTTCCTCTTCCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: NISTCTFHEKLSSHLLQIILKSC*CFLFQD Trigger: GTCCTGGAAGAGGAAGCAGCAGCAGCTCTTCAGGAT...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS-3UTR GCA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCTGCATCCTGAAGAGCTaGTGCTGCTTCCTCTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: NISTCTFHEKLSSHLLQICILKS*CCFLFQ Trigger: CTGGAAGAGGAAGCAGCAGCAGCTCTTCAGGATGCA...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS-3UTR CCA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCTCCTCTTCCAGGACCTaGGTTTGCCAGTTACGACTC | + |
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Preference number: 4 (lower is better) Translates to: NISTCTFHEKLSSHLLQISSSRT*VCQLRL Trigger: GAGTCGTAACTGGCAAACCCAGGTCCTGGAAGAGGA...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS-3UTR CCA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCGTAGGGTTCAGGCTCTaGAGCCAGAATCCTGATGGA | + |
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Preference number: 4 (lower is better) Translates to: NISTCTFHEKLSSHLLQIVGFRL*SQNPDG Trigger: TCCATCAGGATTCTGGCTCCAGAGCCTGAACCCTAC...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS-3UTR TCA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCGCCCGAAGCCCAGGCTaGAAAGAATATCTTCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: NISTCTFHEKLSSHLLQIARSPG*KEYLLH Trigger: ATGCAGAAGATATTCTTTTCAGCCTGGGCTTCGGGC...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS-3UTR TCA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCGACTTCAGGAAGAGCTaGAAGTTAATGCCCTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: NISTCTFHEKLSSHLLQIDFRKS*KLMPLA Trigger: GGCCAAGGGCATTAACTTTCAGCTCTTCCTGAAGTC...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS-3UTR GCA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCCCCTGGTTTTGTTTCTaGTGGATGGTGGGCAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: NISTCTFHEKLSSHLLQIPWFCF*WMVGKF Trigger: GAACTTGCCCACCATCCAGCAGAAACAAAACCAGGG...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS-3UTR CCA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCGTAACTGGCAAAGCCTaGGTGTCTGGAGGAAATTCC | + |
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Preference number: 4 (lower is better) Translates to: NISTCTFHEKLSSHLLQIVTGKA*VSGGNS Trigger: GGAATTTCCTCCAGACACCCAGGCTTTGCCAGTTAC...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS-3UTR CCA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCCCAAGATCAAGTAACTaGCAAAGCCTGGGTGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: NISTCTFHEKLSSHLLQIPRSSN*QSLGVW Trigger: CCAGACACCCAGGCTTTGCCAGTTACTTGATCTTGG...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS-3UTR CCA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCCAGAATCCTGATGGATaGCACATCCGTTGGGTCGAA | + |
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Preference number: 4 (lower is better) Translates to: NISTCTFHEKLSSHLLQIQNPDG*HIRWVE Trigger: TTCGACCCAACGGATGTGCCATCCATCAGGATTCTG...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS-3UTR TCA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCGTAGTTAGATTGCCCTaGTTCTTCAGAAAGGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: NISTCTFHEKLSSHLLQIVVRLP*FFRKAL Trigger: GAGGGCCTTTCTGAAGAATCAGGGCAATCTAACTAC...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS-3UTR TCA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCCCTGAGAAGGGTTGCTaGAAAATCTTGCAGGGATAC | + |
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Preference number: 4 (lower is better) Translates to: NISTCTFHEKLSSHLLQIPEKGC*KILQGY Trigger: GTATCCCTGCAAGATTTTTCAGCAACCCTTCTCAGG...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS-3UTR GCA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCCTATGCTCAGGGTCTTaGTGGATCTTCTCTCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: NISTCTFHEKLSSHLLQILCSGS*WIFSPF Trigger: GAAAGGAGAGAAGATCCAGCAAGACCCTGAGCATAG...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS-3UTR CCA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCGGATGGCACATCCGTTaGGTCGAAATTCCAGAACAT | + |
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Preference number: 4 (lower is better) Translates to: NISTCTFHEKLSSHLLQIGWHIR*VEIPEH Trigger: ATGTTCTGGAATTTCGACCCAACGGATGTGCCATCC...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS-3UTR CCA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCTGTCTGGCTTGTCCCTaGTTTTGTTTCTGCTGGATG | + |
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Preference number: 4 (lower is better) Translates to: NISTCTFHEKLSSHLLQICLACP*FCFCWM Trigger: CATCCAGCAGAAACAAAACCAGGGACAAGCCAGACA...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS-3UTR CCA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCTGGTCAGCTCATGTCTaGCTTGTCCCTGGTTTTGTT | + |
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Preference number: 4 (lower is better) Translates to: NISTCTFHEKLSSHLLQIWSAHV*LVPGFV Trigger: AACAAAACCAGGGACAAGCCAGACATGAGCTGACCA...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS-3UTR TCA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCACATGTTGGATGGTGTaGACTTTTGGACAGGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: NISTCTFHEKLSSHLLQITCWMV*TFGQVS Trigger: AGACACCTGTCCAAAAGTTCACACCATCCAACATGT...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS-3UTR CCA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCTTGAACTGGTTTTGTTaGTTCCACCAGTCATGCTGC | + |
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Preference number: 4 (lower is better) Translates to: NISTCTFHEKLSSHLLQILNWFC*FHQSCC Trigger: GCAGCATGACTGGTGGAACCAACAAAACCAGTTCAA...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS-3UTR CCA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCGCATCTTCTTGTACCTaGTCCAGAATCTCTGAGATG | + |
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Preference number: 4 (lower is better) Translates to: NISTCTFHEKLSSHLLQIASSCT*SRISEM Trigger: CATCTCAGAGATTCTGGACCAGGTACAAGAAGATGC...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS-3UTR TCA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCAGTCCTCAATCTTATTaGTTGGATTCCCTTCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: NISTCTFHEKLSSHLLQISPQSY*LDSLPG Trigger: TCCAGGAAGGGAATCCAATCAATAAGATTGAGGACT...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS-3UTR TCA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCTCCACAGGAACCCTTTaGAACAGATTCTTTCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: NISTCTFHEKLSSHLLQISTGTL*NRFFLA Trigger: AGCAAGAAAGAATCTGTTTCAAAGGGTTCCTGTGGA...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS-3UTR TCA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCGGTGGGCAAGTTCAATaGCTTAATATTCTTGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: NISTCTFHEKLSSHLLQIGGQVQ*LNILVH Trigger: GTGGACAAGAATATTAAGTCATTGAACTTGCCCACC...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS-3UTR GCA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCGTTGCTGAAAAATCTTaGAGGGATACGAGATGTGTC | + |
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Preference number: 4 (lower is better) Translates to: NISTCTFHEKLSSHLLQIVAEKS*RDTRCV Trigger: GACACATCTCGTATCCCTGCAAGATTTTTCAGCAAC...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS-3UTR CCA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCGATGGTGTGAACTTTTaGACAGGTGTCTTAGACACA | + |
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Preference number: 4 (lower is better) Translates to: NISTCTFHEKLSSHLLQIDGVNF*TGVLDT Trigger: TGTGTCTAAGACACCTGTCCAAAAGTTCACACCATC...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS-3UTR CCA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCTTTGTTTCTGCTGGATaGTGGGCAAGTTCAATGACT | + |
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Preference number: 4 (lower is better) Translates to: NISTCTFHEKLSSHLLQIFVSAG*WASSMT Trigger: AGTCATTGAACTTGCCCACCATCCAGCAGAAACAAA...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS-3UTR CCA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCATTTGTATTTTGTATTaGGGGAACAGACTCTTCCCC | + |
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Preference number: 4 (lower is better) Translates to: NISTCTFHEKLSSHLLQIICILY*GNRLFP Trigger: GGGGAAGAGTCTGTTCCCCCAATACAAAATACAAAT...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS-3UTR TCA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCACTTCCCACACAATTTaGTCCAAACTGTTCTTTTTG | + |
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Preference number: 4 (lower is better) Translates to: NISTCTFHEKLSSHLLQITSHTI*SKLFFL Trigger: CAAAAAGAACAGTTTGGATCAAATTGTGTGGGAAGT...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS-3UTR CCA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCCCAAACTGTTCTTTTTaGGGTTGTTGTAAGATGATG | + |
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Preference number: 4 (lower is better) Translates to: NISTCTFHEKLSSHLLQIPNCSF*GCCKMM Trigger: CATCATCTTACAACAACCCCAAAAAGAACAGTTTGG...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS GCA 90 bp | CAGGCTAGAAGGCTCGGGATCCAGTGCATCCTGAAGAGCTGCTGCTaGTTCCTCTTCCAGGACCTGGGTTTGCCAGTTACGACTCTGTCG | + |
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Preference number: 5 (lower is better) Translates to: QARRLGIQCILKSCC*FLFQDLGLPVTTLS Trigger: CGACAGAGTCGTAACTGGCAAACCCAGGTCCTGGAAGAGGAAGCAGCAGCAGCTCTTCAGGATGCACTGGATCCCGAGCCTTCTAGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042586.10 ENSMUST00000217702.2 |
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| CDS GCA 90 bp | ATCCAGGCTAGAAGGCTCGGGATCCAGTGCATCCTGAAGAGCTGCTaGTGCTTCCTCTTCCAGGACCTGGGTTTGCCAGTTACGACTCTG | + |
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Preference number: 5 (lower is better) Translates to: IQARRLGIQCILKSC*CFLFQDLGLPVTTL Trigger: CAGAGTCGTAACTGGCAAACCCAGGTCCTGGAAGAGGAAGCAGCAGCAGCTCTTCAGGATGCACTGGATCCCGAGCCTTCTAGCCTGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042586.10 ENSMUST00000217702.2 |
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| CDS TCA 90 bp | TGGAAAACATCATCCAGGCTAGAAGGCTCGGGATCCAGTGCATCCTaGAGAGCTGCTGCTGCTTCCTCTTCCAGGACCTGGGTTTGCCAG | + |
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Preference number: 5 (lower is better) Translates to: WKTSSRLEGSGSSAS*RAAAASSSRTWVCQ Trigger: CTGGCAAACCCAGGTCCTGGAAGAGGAAGCAGCAGCAGCTCTTCAGGATGCACTGGATCCCGAGCCTTCTAGCCTGGATGATGTTTTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042586.10 ENSMUST00000217702.2 |
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| CDS TCA 90 bp | GACGTTCTCTGGGTGAGTAGGGTTCAGGCTCTGGAGCCAGAATCCTaGTGGATGGCACATCCGTTGGGTCGAAATTCCAGAACATGTTGG | + |
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Preference number: 5 (lower is better) Translates to: DVLWVSRVQALEPES*WMAHPLGRNSRTCW Trigger: CCAACATGTTCTGGAATTTCGACCCAACGGATGTGCCATCCATCAGGATTCTGGCTCCAGAGCCTGAACCCTACTCACCCAGAGAACGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS TCA 90 bp | GATCTCGGGAACCTGTATACAGGCACATTTTTGAGATTGCTCTCCTaGGACGTTCTCTGGGTGAGTAGGGTTCAGGCTCTGGAGCCAGAA | + |
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Preference number: 5 (lower is better) Translates to: DLGNLYTGTFLRLLS*DVLWVSRVQALEPE Trigger: TTCTGGCTCCAGAGCCTGAACCCTACTCACCCAGAGAACGTCTCAGGAGAGCAATCTCAAAAATGTGCCTGTATACAGGTTCCCGAGATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS CCA 90 bp | GGGTTCAGGCTCTGGAGCCAGAATCCTGATGGATGGCACATCCGTTaGGTCGAAATTCCAGAACATGTTGGATGGTGTGAACTTTTGGAC | + |
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Preference number: 5 (lower is better) Translates to: GFRLWSQNPDGWHIR*VEIPEHVGWCELLD Trigger: GTCCAAAAGTTCACACCATCCAACATGTTCTGGAATTTCGACCCAACGGATGTGCCATCCATCAGGATTCTGGCTCCAGAGCCTGAACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS GCA 90 bp | CTGAAAGTTAATGCCCTTGGCCTGAGAAGGGTTGCTGAAAAATCTTaGAGGGATACGAGATGTGTCTTTGTGGTTCTCGTGCCCGAAGCC | + |
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Preference number: 5 (lower is better) Translates to: LKVNALGLRRVAEKS*RDTRCVFVVLVPEA Trigger: GGCTTCGGGCACGAGAACCACAAAGACACATCTCGTATCCCTGCAAGATTTTTCAGCAACCCTTCTCAGGCCAAGGGCATTAACTTTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042586.10 ENSMUST00000217702.2 |
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| CDS TCA 90 bp | GGATACGAGATGTGTCTTTGTGGTTCTCGTGCCCGAAGCCCAGGCTaGAAAGAATATCTTCTGCATCTTCTTGTACCTGGTCCAGAATCT | + |
|
Preference number: 5 (lower is better) Translates to: GYEMCLCGSRARSPG*KEYLLHLLVPGPES Trigger: AGATTCTGGACCAGGTACAAGAAGATGCAGAAGATATTCTTTTCAGCCTGGGCTTCGGGCACGAGAACCACAAAGACACATCTCGTATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042586.10 ENSMUST00000217702.2 |
||
| CDS CCA 90 bp | GAAGGGTTGCTGAAAAATCTTGCAGGGATACGAGATGTGTCTTTGTaGTTCTCGTGCCCGAAGCCCAGGCTGAAAAGAATATCTTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: EGLLKNLAGIRDVSL*FSCPKPRLKRISSA Trigger: TGCAGAAGATATTCTTTTCAGCCTGGGCTTCGGGCACGAGAACCACAAAGACACATCTCGTATCCCTGCAAGATTTTTCAGCAACCCTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042586.10 ENSMUST00000217702.2 |
||
| CDS-3UTR CAA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCCTCTTCCCCAAGGGCTaGCCTATGCTCAGGGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: NISTCTFHEKLSSHLLQILFPKG*PMLRVL Trigger: CAAGACCCTGAGCATAGGCAAGCCCTTGGGGAAGAG...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
||
| CDS TCA 90 bp | AAAGCTTGTCCCATGGCTAGAATATCCACTGTAGTTAGATTGCCCTaGTTCTTCAGAAAGGCCCTCTTCAGTGTCTCTACAACCACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: KACPMARISTVVRLP*FFRKALFSVSTTTA Trigger: GGCTGTGGTTGTAGAGACACTGAAGAGGGCCTTTCTGAAGAATCAGGGCAATCTAACTACAGTGGATATTCTAGCCATGGGACAAGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042586.10 ENSMUST00000217702.2 |
||
| CDS CCA 90 bp | GATGGATGGCACATCCGTTGGGTCGAAATTCCAGAACATGTTGGATaGTGTGAACTTTTGGACAGGTGTCTTAGACACATAGGAGTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: DGWHIRWVEIPEHVG*CELLDRCLRHIGVE Trigger: CTCTACTCCTATGTGTCTAAGACACCTGTCCAAAAGTTCACACCATCCAACATGTTCTGGAATTTCGACCCAACGGATGTGCCATCCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS-3UTR CAA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCGGCTTGTCCCTGGTTTaGTTTCTGCTGGATGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: NISTCTFHEKLSSHLLQIGLSLV*FLLDGG Trigger: CCCACCATCCAGCAGAAACAAAACCAGGGACAAGCC...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
||
| CDS GCA 90 bp | CTGAAAAATCTTGCAGGGATACGAGATGTGTCTTTGTGGTTCTCGTaGCCGAAGCCCAGGCTGAAAAGAATATCTTCTGCATCTTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LKNLAGIRDVSLWFS*PKPRLKRISSASSC Trigger: ACAAGAAGATGCAGAAGATATTCTTTTCAGCCTGGGCTTCGGGCACGAGAACCACAAAGACACATCTCGTATCCCTGCAAGATTTTTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042586.10 ENSMUST00000217702.2 |
||
| CDS CCA 90 bp | GCCAAACTAGAGCCAAGATCAAGTAACTGGCAAAGCCTGGGTGTCTaGAGGAAATTCCTAGAGAAGAGGTTTCCATTGGTAGACAGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: AKLEPRSSNWQSLGV*RKFLEKRFPLVDSN Trigger: ATTACTGTCTACCAATGGAAACCTCTTCTCTAGGAATTTCCTCCAGACACCCAGGCTTTGCCAGTTACTTGATCTTGGCTCTAGTTTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042586.10 ENSMUST00000217702.2 |
||
| CDS CCA 90 bp | CCGAAGCCCAGGCTGAAAAGAATATCTTCTGCATCTTCTTGTACCTaGTCCAGAATCTCTGAGATGCTTGAACTGGTTTTGTTGGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PKPRLKRISSASSCT*SRISEMLELVLLVP Trigger: TGGAACCAACAAAACCAGTTCAAGCATCTCAGAGATTCTGGACCAGGTACAAGAAGATGCAGAAGATATTCTTTTCAGCCTGGGCTTCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042586.10 ENSMUST00000217702.2 |
||
| CDS CCA 90 bp | AGATTGGTCAGCTCATGTCTGGCTTGTCCCTGGTTTTGTTTCTGCTaGATGGTGGGCAAGTTCAATGACTTAATATTCTTGTCCACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RLVSSCLACPWFCFC*MVGKFNDLIFLSTG Trigger: TCCTGTGGACAAGAATATTAAGTCATTGAACTTGCCCACCATCCAGCAGAAACAAAACCAGGGACAAGCCAGACATGAGCTGACCAATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
||
| CDS-3UTR CAA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCCTCCATCTCCATCCTTaGCACCTGAGACTTCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: NISTCTFHEKLSSHLLQILHLHP*HLRLQE Trigger: TTCCTGAAGTCTCAGGTGCAAAGGATGGAGATGGAG...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS-3UTR CAA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCTGGATGGCACATCCGTaGGGTCGAAATTCCAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: NISTCTFHEKLSSHLLQIWMAHP*GRNSRT Trigger: TGTTCTGGAATTTCGACCCAACGGATGTGCCATCCA...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
||
| CDS-3UTR CAA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCCCTATGCTCAGGGTCTaGCTGGATCTTCTCTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: NISTCTFHEKLSSHLLQIPMLRV*LDLLSF Trigger: AAAGGAGAGAAGATCCAGCAAGACCCTGAGCATAGG...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
||
| CDS-3UTR CAA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCCAGCTCATGTCTGGCTaGTCCCTGGTTTTGTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: NISTCTFHEKLSSHLLQIQLMSG*SLVLFL Trigger: CAGAAACAAAACCAGGGACAAGCCAGACATGAGCTG...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS CCA 90 bp | CTCTGTCCATCACTTCCCACACAATTTGATCCAAACTGTTCTTTTTaGGGTTGTTGTAAGATGATGATAGCCGATCTCGGGAACCTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: LCPSLPTQFDPNCSF*GCCKMMIADLGNLY Trigger: ATACAGGTTCCCGAGATCGGCTATCATCATCTTACAACAACCCCAAAAAGAACAGTTTGGATCAAATTGTGTGGGAAGTGATGGACAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS-3UTR CAA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCCTTGAACTGGTTTTGTaGGTTCCACCAGTCATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NISTCTFHEKLSSHLLQILELVL*VPPVML Trigger: CAGCATGACTGGTGGAACCAACAAAACCAGTTCAAG...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
||
| CDS-3UTR CAA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCGGATGGTGTGAACTTTaGGACAGGTGTCTTAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: NISTCTFHEKLSSHLLQIGWCEL*DRCLRH Trigger: GTGTCTAAGACACCTGTCCAAAAGTTCACACCATCC...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS-3UTR CAA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCCAGTCCTCAATCTTATaGATTGGATTCCCTTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: NISTCTFHEKLSSHLLQIQSSIL*IGFPSW Trigger: CCAGGAAGGGAATCCAATCAATAAGATTGAGGACTG...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS-3UTR CAA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCATCTTCTGCATCTTCTaGTACCTGGTCCAGAATCTC | + |
|
Preference number: 5 (lower is better) Translates to: NISTCTFHEKLSSHLLQIIFCIF*YLVQNL Trigger: GAGATTCTGGACCAGGTACAAGAAGATGCAGAAGAT...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
||
| CDS-3UTR CAA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCGAATCTCTGAGATGCTaGAACTGGTTTTGTTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: NISTCTFHEKLSSHLLQIESLRC*NWFCWF Trigger: GAACCAACAAAACCAGTTCAAGCATCTCAGAGATTC...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS-3UTR CAA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCGATTTGTATTTTGTATaGGGGGAACAGACTCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: NISTCTFHEKLSSHLLQIDLYFV*GEQTLP Trigger: GGGAAGAGTCTGTTCCCCCAATACAAAATACAAATC...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
||
| CDS-3UTR CAA 90 bp | AACATCAGTACATGTACGTTTCATGAGAAACTGAGCTCTCATCTGCTCCAAATCAGATGGATTTGTATTTaGTATTGGGGGAACAGACTC | + |
|
Preference number: 5 (lower is better) Translates to: NISTCTFHEKLSSHLLQIRWICI*YWGNRL Trigger: GAGTCTGTTCCCCCAATACAAAATACAAATCCATCT...GATTTGGAGCAGATGAGAGCTCAGTTTCTCATGAAACGTACATGTACTGATGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS GCA 72 bp | AGGCTCGGGATCCAGTGCATCCTGAAGAGCTGCTGCTaGTTCCTCTTCCAGGACCTGGGTTTGCCAGTTACG | + |
|
Preference number: 6 (lower is better) Translates to: RLGIQCILKSCC*FLFQDLGLPVT Trigger: CGTAACTGGCAAACCCAGGTCCTGGAAGAGGAAGCAGCAGCAGCTCTTCAGGATGCACTGGATCCCGAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042586.10 ENSMUST00000217702.2 |
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| CDS GCA 72 bp | AAGAAAGCATCAGCAGTGACAGCCAGCGTCTGCACCTaGTTAAACCGGCTGGCCAGCATCAGGCAGGGATCC | + |
|
Preference number: 6 (lower is better) Translates to: KKASAVTASVCT*LNRLASIRQGS Trigger: GGATCCCTGCCTGATGCTGGCCAGCCGGTTTAAGCAGGTGCAGACGCTGGCTGTCACTGCTGATGCTTTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS GCA 72 bp | AGAGCTGCTGCTGCTTCCTCTTCCAGGACCTGGGTTTaGCAGTTACGACTCTGTCGTAACCAGGCCCTTCGT | + |
|
Preference number: 6 (lower is better) Translates to: RAAAASSSRTWV*QLRLCRNQALR Trigger: ACGAAGGGCCTGGTTACGACAGAGTCGTAACTGGCAAACCCAGGTCCTGGAAGAGGAAGCAGCAGCAGCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042586.10 ENSMUST00000217702.2 |
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| CDS GCA 72 bp | AGAAGGCTCGGGATCCAGTGCATCCTGAAGAGCTGCTaGTGCTTCCTCTTCCAGGACCTGGGTTTGCCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: RRLGIQCILKSC*CFLFQDLGLPV Trigger: AACTGGCAAACCCAGGTCCTGGAAGAGGAAGCAGCAGCAGCTCTTCAGGATGCACTGGATCCCGAGCCTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042586.10 ENSMUST00000217702.2 |
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| CDS GCA 72 bp | AGACAGAAGAAAGCATCAGCAGTGACAGCCAGCGTCTaGACCTGCTTAAACCGGCTGGCCAGCATCAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RQKKASAVTASV*TCLNRLASIRQ Trigger: CTGCCTGATGCTGGCCAGCCGGTTTAAGCAGGTGCAGACGCTGGCTGTCACTGCTGATGCTTTCTTCTGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS CAA 90 bp | AAACCGGCTGGCCAGCATCAGGCAGGGATCCTCCATCTCCATCCTTaGCACCTGAGACTTCAGGAAGAGCTGAAAGTTAATGCCCTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: KPAGQHQAGILHLHP*HLRLQEELKVNALG Trigger: GCCAAGGGCATTAACTTTCAGCTCTTCCTGAAGTCTCAGGTGCAAAGGATGGAGATGGAGGATCCCTGCCTGATGCTGGCCAGCCGGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS CAA 90 bp | GCTGACATTGGCCAGCATCAGGCAGGGATCCTCCATCTCCATCCTTaGCACCTGAGACTTCAGGAAGAGCTGAAAGTTAATGCCCTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: ADIGQHQAGILHLHP*HLRLQEELKVNALG Trigger: GCCAAGGGCATTAACTTTCAGCTCTTCCTGAAGTCTCAGGTGCAAAGGATGGAGATGGAGGATCCCTGCCTGATGCTGGCCAATGTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217702.2 |
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| CDS CCA 72 bp | GTAGGGTTCAGGCTCTGGAGCCAGAATCCTGATGGATaGCACATCCGTTGGGTCGAAATTCCAGAACATGTT | + |
|
Preference number: 6 (lower is better) Translates to: VGFRLWSQNPDG*HIRWVEIPEHV Trigger: AACATGTTCTGGAATTTCGACCCAACGGATGTGCCATCCATCAGGATTCTGGCTCCAGAGCCTGAACCCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS GCA 72 bp | GAAAGGCCCTCTTCAGTGTCTCTACAACCACAGCCCTaGAGCCAGTCCTCAATCTTATTGATTGGATTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: ERPSSVSLQPQP*SQSSILLIGFP Trigger: AGGGAATCCAATCAATAAGATTGAGGACTGGCTGCAGGGCTGTGGTTGTAGAGACACTGAAGAGGGCCTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042586.10 ENSMUST00000217702.2 |
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| CDS GCA 72 bp | CTTGCAGGGATACGAGATGTGTCTTTGTGGTTCTCGTaGCCGAAGCCCAGGCTGAAAAGAATATCTTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: LAGIRDVSLWFS*PKPRLKRISSA Trigger: TGCAGAAGATATTCTTTTCAGCCTGGGCTTCGGGCACGAGAACCACAAAGACACATCTCGTATCCCTGCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042586.10 ENSMUST00000217702.2 |
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| CDS CCA 72 bp | CTCTGGAGCCAGAATCCTGATGGATGGCACATCCGTTaGGTCGAAATTCCAGAACATGTTGGATGGTGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: LWSQNPDGWHIR*VEIPEHVGWCE Trigger: TTCACACCATCCAACATGTTCTGGAATTTCGACCCAACGGATGTGCCATCCATCAGGATTCTGGCTCCAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS CAA 72 bp | TGGGACATCTTGATATTTTCTTGTGTGAGGCTGACATaGGCCAGCATCAGGCAGGGATCCTCCATCTCCATC | + |
|
Preference number: 6 (lower is better) Translates to: WDILIFSCVRLT*ASIRQGSSISI Trigger: GATGGAGATGGAGGATCCCTGCCTGATGCTGGCCAATGTCAGCCTCACACAAGAAAATATCAAGATGTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217702.2 |
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| CDS CAA 72 bp | GGGGAGTTGATGTTCATGGGACATCTTGATATTTTCTaGTGTGAGGCTGACATTGGCCAGCATCAGGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GELMFMGHLDIF*CEADIGQHQAG Trigger: CCCTGCCTGATGCTGGCCAATGTCAGCCTCACACAAGAAAATATCAAGATGTCCCATGAACATCAACTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217702.2 |
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| CDS TCA 72 bp | TACAACCACAGCCCTGCAGCCAGTCCTCAATCTTATTaGTTGGATTCCCTTCCTGGAAAACATCATCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: YNHSPAASPQSY*LDSLPGKHHPG Trigger: GCCTGGATGATGTTTTCCAGGAAGGGAATCCAATCAATAAGATTGAGGACTGGCTGCAGGGCTGTGGTTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042586.10 ENSMUST00000217702.2 |
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| CDS CAA 72 bp | GGTGTCTGGAGGAAATTCCTAGAGAAGAGGTTTCCATaGGTAGACAGTAATGTGGCCTCTGCTCCAAGACTC | + |
|
Preference number: 6 (lower is better) Translates to: GVWRKFLEKRFP*VDSNVASAPRL Trigger: GAGTCTTGGAGCAGAGGCCACATTACTGTCTACCAATGGAAACCTCTTCTCTAGGAATTTCCTCCAGACACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042586.10 ENSMUST00000217702.2 |
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| CDS CAA 72 bp | ACCTGGTCCAGAATCTCTGAGATGCTTGAACTGGTTTaGTTGGTTCCACCAGTCATGCTGCTGGAAGCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: TWSRISEMLELV*LVPPVMLLEAK Trigger: TTTGGCTTCCAGCAGCATGACTGGTGGAACCAACAAAACCAGTTCAAGCATCTCAGAGATTCTGGACCAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042586.10 ENSMUST00000217702.2 |
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| CDS CAA 72 bp | TTGCTGAAAAATCTTGCAGGGATACGAGATGTGTCTTaGTGGTTCTCGTGCCCGAAGCCCAGGCTGAAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: LLKNLAGIRDVS*WFSCPKPRLKR Trigger: TCTTTTCAGCCTGGGCTTCGGGCACGAGAACCACAAAGACACATCTCGTATCCCTGCAAGATTTTTCAGCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042586.10 ENSMUST00000217702.2 |
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| CDS CAA 90 bp | CAAAGCCTGGGTGTCTGGAGGAAATTCCTAGAGAAGAGGTTTCCATaGGTAGACAGTAATGTGGCCTCTGCTCCAAGACTCAAGTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: QSLGVWRKFLEKRFP*VDSNVASAPRLKSS Trigger: AGATGACTTGAGTCTTGGAGCAGAGGCCACATTACTGTCTACCAATGGAAACCTCTTCTCTAGGAATTTCCTCCAGACACCCAGGCTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042586.10 ENSMUST00000217702.2 |
||
| CDS CAA 90 bp | AGGGTAGGAAACACATGGAAGGGAAGAAGTAGATGGATTTGTATTTaGTATTGGGGGAACAGACTCTTCCCCAAGGGCTTGCCTATGCTC | + |
|
Preference number: 6 (lower is better) Translates to: RVGNTWKGRSRWICI*YWGNRLFPKGLPML Trigger: GAGCATAGGCAAGCCCTTGGGGAAGAGTCTGTTCCCCCAATACAAAATACAAATCCATCTACTTCTTCCCTTCCATGTGTTTCCTACCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
||
| CDS CCA 72 bp | GAGCCAAGATCAAGTAACTGGCAAAGCCTGGGTGTCTaGAGGAAATTCCTAGAGAAGAGGTTTCCATTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: EPRSSNWQSLGV*RKFLEKRFPLV Trigger: TACCAATGGAAACCTCTTCTCTAGGAATTTCCTCCAGACACCCAGGCTTTGCCAGTTACTTGATCTTGGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042586.10 ENSMUST00000217702.2 |
||
| CDS CCA 72 bp | CTGAAAAATCTTGCAGGGATACGAGATGTGTCTTTGTaGTTCTCGTGCCCGAAGCCCAGGCTGAAAAGAATA | + |
|
Preference number: 6 (lower is better) Translates to: LKNLAGIRDVSL*FSCPKPRLKRI Trigger: TATTCTTTTCAGCCTGGGCTTCGGGCACGAGAACCACAAAGACACATCTCGTATCCCTGCAAGATTTTTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042586.10 ENSMUST00000217702.2 |
||
| CDS TCA 72 bp | CCCATGGCTAGAATATCCACTGTAGTTAGATTGCCCTaGTTCTTCAGAAAGGCCCTCTTCAGTGTCTCTACA | + |
|
Preference number: 6 (lower is better) Translates to: PMARISTVVRLP*FFRKALFSVST Trigger: TGTAGAGACACTGAAGAGGGCCTTTCTGAAGAATCAGGGCAATCTAACTACAGTGGATATTCTAGCCATGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042586.10 ENSMUST00000217702.2 |
||
| CDS TCA 72 bp | TTTATGTGGTACTGTGGACCTGGTCTTGCTAGAGCATaGGCATGGCACATGTCTCCCTGTGTTTCTTCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: FMWYCGPGLARA*AWHMSPCVSSL Trigger: TAAAGAAGAAACACAGGGAGACATGTGCCATGCTCATGCTCTAGCAAGACCAGGTCCACAGTACCACATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
||
| CDS GCA 72 bp | GTCAGCTCATGTCTGGCTTGTCCCTGGTTTTGTTTCTaGTGGATGGTGGGCAAGTTCAATGACTTAATATTC | + |
|
Preference number: 6 (lower is better) Translates to: VSSCLACPWFCF*WMVGKFNDLIF Trigger: GAATATTAAGTCATTGAACTTGCCCACCATCCAGCAGAAACAAAACCAGGGACAAGCCAGACATGAGCTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
||
| CDS CAA 90 bp | ATCCGTTGGGTCGAAATTCCAGAACATGTTGGATGGTGTGAACTTTaGGACAGGTGTCTTAGACACATAGGAGTAGAGACAGAAGAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: IRWVEIPEHVGWCEL*DRCLRHIGVETEES Trigger: GCTTTCTTCTGTCTCTACTCCTATGTGTCTAAGACACCTGTCCAAAAGTTCACACCATCCAACATGTTCTGGAATTTCGACCCAACGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
||
| CDS CCA 72 bp | AGCTCATGTCTGGCTTGTCCCTGGTTTTGTTTCTGCTaGATGGTGGGCAAGTTCAATGACTTAATATTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SSCLACPWFCFC*MVGKFNDLIFL Trigger: CAAGAATATTAAGTCATTGAACTTGCCCACCATCCAGCAGAAACAAAACCAGGGACAAGCCAGACATGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
||
| CDS CCA 72 bp | TCACTTCCCACACAATTTGATCCAAACTGTTCTTTTTaGGGTTGTTGTAAGATGATGATAGCCGATCTCGGG | + |
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Preference number: 6 (lower is better) Translates to: SLPTQFDPNCSF*GCCKMMIADLG Trigger: CCCGAGATCGGCTATCATCATCTTACAACAACCCCAAAAAGAACAGTTTGGATCAAATTGTGTGGGAAGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS CAA 72 bp | GTCGAAATTCCAGAACATGTTGGATGGTGTGAACTTTaGGACAGGTGTCTTAGACACATAGGAGTAGAGACA | + |
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Preference number: 6 (lower is better) Translates to: VEIPEHVGWCEL*DRCLRHIGVET Trigger: TGTCTCTACTCCTATGTGTCTAAGACACCTGTCCAAAAGTTCACACCATCCAACATGTTCTGGAATTTCGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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| CDS TCA 72 bp | CTGGTTTTGTTTCTGCTGGATGGTGGGCAAGTTCAATaGCTTAATATTCTTGTCCACAGGAACCCTTTGAAA | + |
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Preference number: 6 (lower is better) Translates to: LVLFLLDGGQVQ*LNILVHRNPLK Trigger: TTTCAAAGGGTTCCTGTGGACAAGAATATTAAGTCATTGAACTTGCCCACCATCCAGCAGAAACAAAACCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042586.10 |
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