Pregenerated sensors for TESMIN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024905Ensembl transcript IDs: ENSMUST00000025840.16, ENSMUST00000127142.2, ENSMUST00000142193.8, ENSMUST00000151341.8
Found 196 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GATCACTCAGACCTCACAGCTGACCTGGCCATGATGCGCGGCCTCTaGTCCTCCCTGGGCACCAGCTTCCTCGGTGCAGATTCCCAGGGC | + |
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Preference number: 1 (lower is better) Translates to: DHSDLTADLAMMRGL*SSLGTSFLGADSQG Trigger: GCCCTGGGAATCTGCACCGAGGAAGCTGGTGCCCAGGGAGGAGCAGAGGCCGCGCATCATGGCCAGGTCAGCTGTGAGGTCTGAGTGATC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
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| 3UTR TCA 90 bp | GCCTTTCACACGGCCTGTAATAGCCCCAGGCCCCCTGCACAGCCTTaGTGCTATCAGCAGCAGCTGCAAGCTGCAGAAGCCATCTTGTTT | + |
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Preference number: 1 (lower is better) Translates to: AFHTACNSPRPPAQP*CYQQQLQAAEAILF Trigger: AAACAAGATGGCTTCTGCAGCTTGCAGCTGCTGCTGATAGCATCAAGGCTGTGCAGGGGGCCTGGGGCTATTACAGGCCGTGTGAAAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
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| 3UTR TCA 90 bp | ACAGGCCTGGCCTGGAAGACCCCTGATGGCCACCTGACTTGTATGTaGTTTGGGCAGAGTCCACCTGAAGAAGAGCCTAGCTCTCTAACT | + |
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Preference number: 1 (lower is better) Translates to: TGLAWKTPDGHLTCM*FGQSPPEEEPSSLT Trigger: AGTTAGAGAGCTAGGCTCTTCTTCAGGTGGACTCTGCCCAAATCACATACAAGTCAGGTGGCCATCAGGGGTCTTCCAGGCCAGGCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000142193.8 |
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| 3UTR TCA 90 bp | TATCTCCTGTCACAGGCCTGGCCTGGAAGACCCCTGATGGCCACCTaGCTTGTATGTGATTTGGGCAGAGTCCACCTGAAGAAGAGCCTA | + |
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Preference number: 1 (lower is better) Translates to: YLLSQAWPGRPLMAT*LVCDLGRVHLKKSL Trigger: TAGGCTCTTCTTCAGGTGGACTCTGCCCAAATCACATACAAGTCAGGTGGCCATCAGGGGTCTTCCAGGCCAGGCCTGTGACAGGAGATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000142193.8 |
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| 3UTR TCA 90 bp | GTGGGCATAATAAGCCACCTCACCTTCTGGTGTCTGAGGTCACTGTaGCTGGTCAGCAGGCGACCGTGCAGCAGTAATTATGGAGAAGAG | + |
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Preference number: 1 (lower is better) Translates to: VGIISHLTFWCLRSL*LVSRRPCSSNYGEE Trigger: CTCTTCTCCATAATTACTGCTGCACGGTCGCCTGCTGACCAGTCACAGTGACCTCAGACACCAGAAGGTGAGGTGGCTTATTATGCCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000142193.8 |
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| 3UTR CCA 90 bp | ATCAGCTGCAGCATACACACGGCATTAAAGTGGACAGAGTGGACCTaGGTAAGTGCACCTCATGCCCACCTGAGACTATGGACATGTGCC | + |
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Preference number: 1 (lower is better) Translates to: ISCSIHTALKWTEWT*VSAPHAHLRLWTCA Trigger: GGCACATGTCCATAGTCTCAGGTGGGCATGAGGTGCACTTACCCAGGTCCACTCTGTCCACTTTAATGCCGTGTGTATGCTGCAGCTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
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| 3UTR TCA 90 bp | CATTGCTCCTTTGGAAAGCTGCTGCAGTGGAACTCCACAGAGCTGTaGCTGTGGGCCAGCATCTGCTACTATTCTGGACATGACAGAGCA | + |
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Preference number: 1 (lower is better) Translates to: HCSFGKLLQWNSTEL*LWASICYYSGHDRA Trigger: TGCTCTGTCATGTCCAGAATAGTAGCAGATGCTGGCCCACAGTCACAGCTCTGTGGAGTTCCACTGCAGCAGCTTTCCAAAGGAGCAATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
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| 3UTR GCA 90 bp | CAGGCCCCCTGCACAGCCTTGATGCTATCAGCAGCAGCTGCAAGCTaGAGAAGCCATCTTGTTTCTTCTTCCAGTATAAACAGCTGCCAA | + |
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Preference number: 1 (lower is better) Translates to: QAPCTALMLSAAAAS*RSHLVSSSSINSCQ Trigger: TTGGCAGCTGTTTATACTGGAAGAAGAAACAAGATGGCTTCTGCAGCTTGCAGCTGCTGCTGATAGCATCAAGGCTGTGCAGGGGGCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
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| 3UTR GCA 90 bp | GAGAAGGACAAACTACACTGCAGACACATTGCTCCTTTGGAAAGCTaGTGCAGTGGAACTCCACAGAGCTGTGACTGTGGGCCAGCATCT | + |
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Preference number: 1 (lower is better) Translates to: EKDKLHCRHIAPLES*CSGTPQSCDCGPAS Trigger: AGATGCTGGCCCACAGTCACAGCTCTGTGGAGTTCCACTGCAGCAGCTTTCCAAAGGAGCAATGTGTCTGCAGTGTAGTTTGTCCTTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
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| 3UTR TCA 90 bp | ACCCACAGGAAGGTTAGTGATCTTGCTCTGGGGGCAGGGACAGGATaGCTACTGATGTTCCAGCAGAGTTCATTTTACAGTGCAGCAAGA | + |
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Preference number: 1 (lower is better) Translates to: THRKVSDLALGAGTG*LLMFQQSSFYSAAR Trigger: TCTTGCTGCACTGTAAAATGAACTCTGCTGGAACATCAGTAGTCATCCTGTCCCTGCCCCCAGAGCAAGATCACTAACCTTCCTGTGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
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| 3UTR CCA 90 bp | CTGGTCAGCAGGCGACCGTGCAGCAGTAATTATGGAGAAGAGGGTTaGACAGGAGACAAGTTTTCTCACTTCAAGCAGAAATACAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: LVSRRPCSSNYGEEG*TGDKFSHFKQKYRK Trigger: CTTCCTGTATTTCTGCTTGAAGTGAGAAAACTTGTCTCCTGTCCAACCCTCTTCTCCATAATTACTGCTGCACGGTCGCCTGCTGACCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000142193.8 |
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| 3UTR GCA 90 bp | AGGGACAGGATGACTACTGATGTTCCAGCAGAGTTCATTTTACAGTaGAGCAAGAAGAGCAGCTTACACAGCATCTTAGATGCTTGCATC | + |
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Preference number: 1 (lower is better) Translates to: RDRMTTDVPAEFILQ*SKKSSLHSILDACI Trigger: GATGCAAGCATCTAAGATGCTGTGTAAGCTGCTCTTCTTGCTGCACTGTAAAATGAACTCTGCTGGAACATCAGTAGTCATCCTGTCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
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| 3UTR GCA 90 bp | GCAAGCTGCAGAAGCCATCTTGTTTCTTCTTCCAGTATAAACAGCTaGCAAAGGATGATCAATGAGAATGCCACAAATCCAGGTACACTA | + |
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Preference number: 1 (lower is better) Translates to: ASCRSHLVSSSSINS*QRMINENATNPGTL Trigger: TAGTGTACCTGGATTTGTGGCATTCTCATTGATCATCCTTTGGCAGCTGTTTATACTGGAAGAAGAAACAAGATGGCTTCTGCAGCTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
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| 3UTR TCA 90 bp | TCTTGTTTCTTCTTCCAGTATAAACAGCTGCCAAAGGATGATCAATaGGAATGCCACAAATCCAGGTACACTATGCTCACAGAGGAAAGC | + |
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Preference number: 1 (lower is better) Translates to: SCFFFQYKQLPKDDQ*ECHKSRYTMLTEES Trigger: GCTTTCCTCTGTGAGCATAGTGTACCTGGATTTGTGGCATTCTCATTGATCATCCTTTGGCAGCTGTTTATACTGGAAGAAGAAACAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
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| 3UTR CCA 90 bp | GGTACTGAGACAAATATATTTTCAGCTACTAACCAACTGGGAGTCTaGAAAGGTTTATTCTCACAACAAAACACAAAGTGTGGGCATAAT | + |
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Preference number: 1 (lower is better) Translates to: GTETNIFSATNQLGV*KGLFSQQNTKCGHN Trigger: ATTATGCCCACACTTTGTGTTTTGTTGTGAGAATAAACCTTTCCAGACTCCCAGTTGGTTAGTAGCTGAAAATATATTTGTCTCAGTACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025840.16 |
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| 3UTR-3UTR TCA 90 bp | CCTCACCTTCTGGTGTCTGAGGTCACTGTGACTGGTCAGCAGGCGACCGTGCAGCAGCTGACCTGGCCATaGTGCGCGGCCTCTGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: PHLLVSEVTVTGQQATVQQLTWP*CAASAP Trigger: AGGAGCAGAGGCCGCGCATCATGGCCAGGTCAGCTG...CTGCACGGTCGCCTGCTGACCAGTCACAGTGACCTCAGACACCAGAAGGTGAGG 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000142193.8 |
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| 3UTR-3UTR TCA 90 bp | AGTAGGCTGGCCAGTACCATGCAGATCACTCAGACCTCACAGCTGACCTGGCCAGCAGATTCCCAGGGCTaGGGCTTGCCACAGGCATTC | + |
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Preference number: 2 (lower is better) Translates to: SRLASTMQITQTSQLTWPADSQG*GLPQAF Trigger: GAATGCCTGTGGCAAGCCTCAGCCCTGGGAATCTGC...TGGCCAGGTCAGCTGTGAGGTCTGAGTGATCTGCATGGTACTGGCCAGCCTACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
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| 3UTR-3UTR TCA 90 bp | ACCTTGAGTAGGCTGGCCAGTACCATGCAGATCACTCAGACCTCACAGCTGACCGCAGATTCCCAGGGCTaGGGCTTGCCACAGGCATTC | + |
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Preference number: 2 (lower is better) Translates to: TLSRLASTMQITQTSQLTADSQG*GLPQAF Trigger: GAATGCCTGTGGCAAGCCTCAGCCCTGGGAATCTGC...GGTCAGCTGTGAGGTCTGAGTGATCTGCATGGTACTGGCCAGCCTACTCAAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGGCCAGTACCATGCAGATCACTCAGACCTCACAGCTGACCTGGCCATGATGCCCAGGGCTGAGGCTTaGCACAGGCATTCCCCTTTA | + |
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Preference number: 2 (lower is better) Translates to: AGQYHADHSDLTADLAMMPRAEA*HRHSPL Trigger: TAAAGGGGAATGCCTGTGGCAAGCCTCAGCCCTGGG...CATCATGGCCAGGTCAGCTGTGAGGTCTGAGTGATCTGCATGGTACTGGCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
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| 3UTR-3UTR GCA 90 bp | CCACCTCACCTTCTGGTGTCTGAGGTCACTGTGACTGGTCAGCAGGCGACCGTGCAGGGTGGCTCTGCCTaGTTGCACTTTAGGATACCT | + |
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Preference number: 2 (lower is better) Translates to: PPHLLVSEVTVTGQQATVQGGSA*LHFRIP Trigger: AGGTATCCTAAAGTGCAAGCAGGCAGAGCCACCCTG...CACGGTCGCCTGCTGACCAGTCACAGTGACCTCAGACACCAGAAGGTGAGGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000142193.8 |
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| 3UTR-3UTR TCA 90 bp | ACAAATCCAGGTACACTATGCTCACAGAGGAAAGCAAGAACCCATCCTGTCTCAGGGGCAGGGACAGGATaGCTACTGATGTTCCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: TNPGTLCSQRKARTHPVSGAGTG*LLMFQQ Trigger: CTGCTGGAACATCAGTAGTCATCCTGTCCCTGCCCC...TGAGACAGGATGGGTTCTTGCTTTCCTCTGTGAGCATAGTGTACCTGGATTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
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| 3UTR CAA 90 bp | GAGAGTGATGATCACGAGAGAAGGACAAACTACACTGCAGACACATaGCTCCTTTGGAAAGCTGCTGCAGTGGAACTCCACAGAGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: ESDDHERRTNYTADT*LLWKAAAVELHRAV Trigger: CACAGCTCTGTGGAGTTCCACTGCAGCAGCTTTCCAAAGGAGCAATGTGTCTGCAGTGTAGTTTGTCCTTCTCTCGTGATCATCACTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
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| 3UTR-3UTR GCA 90 bp | AGTATGTGTGAGAGAGTGATGATCACGAGAGAAGGACAAACTACACTGCAGACAGTGCCACAAAGTGTGTaGCAGGGACACAGAGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: SMCERVMITREGQTTLQTVPQSV*QGHRGS Trigger: GCTGCCTCTGTGTCCCTGGCACACACTTTGTGGCAC...TGTCTGCAGTGTAGTTTGTCCTTCTCTCGTGATCATCACTCTCTCACACATACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
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| 3UTR-3UTR TCA 90 bp | AGCAGTAATTATGGAGAAGAGGGTTGGACAGGAGACAAGTTTTCTCACTTCAAGCCCCTGATGGCCACCTaGCTTGTATGTGATTTGGGC | + |
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Preference number: 2 (lower is better) Translates to: SSNYGEEGWTGDKFSHFKPLMAT*LVCDLG Trigger: GCCCAAATCACATACAAGTCAGGTGGCCATCAGGGG...CTTGAAGTGAGAAAACTTGTCTCCTGTCCAACCCTCTTCTCCATAATTACTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000142193.8 |
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| 3UTR-3UTR TCA 90 bp | ACAAATCCAGGTACACTATGCTCACAGAGGAAAGCAAGAACCCATCCTGTCTCATATCCGGAGGCCATCTaGCTTCTGTTTGTCTGTCTC | + |
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Preference number: 2 (lower is better) Translates to: TNPGTLCSQRKARTHPVSYPEAI*LLFVCL Trigger: GAGACAGACAAACAGAAGTCAGATGGCCTCCGGATA...TGAGACAGGATGGGTTCTTGCTTTCCTCTGTGAGCATAGTGTACCTGGATTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
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| 3UTR-3UTR GCA 90 bp | AATTATGGAGAAGAGGGTTGGACAGGAGACAAGTTTTCTCACTTCAAGCAGAAACCCAGGGCTGAGGCTTaGCACAGGCATTCCCCTTTA | + |
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Preference number: 2 (lower is better) Translates to: NYGEEGWTGDKFSHFKQKPRAEA*HRHSPL Trigger: TAAAGGGGAATGCCTGTGGCAAGCCTCAGCCCTGGG...TTTCTGCTTGAAGTGAGAAAACTTGTCTCCTGTCCAACCCTCTTCTCCATAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000142193.8 |
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| 3UTR-3UTR CCA 90 bp | AATTATGGAGAAGAGGGTTGGACAGGAGACAAGTTTTCTCACTTCAAGCAGAAATGTCCATCCCCAGGGTaGCTCTGCCTGCTTGCACTT | + |
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Preference number: 2 (lower is better) Translates to: NYGEEGWTGDKFSHFKQKCPSPG*LCLLAL Trigger: AAGTGCAAGCAGGCAGAGCCACCCTGGGGATGGACA...TTTCTGCTTGAAGTGAGAAAACTTGTCTCCTGTCCAACCCTCTTCTCCATAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000142193.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCTGTTTGTCTGTCTCCAGACCCTTGTCTCACACTTGCCAATACAGCACAGGTACAACTGTGGATCATaGAACACACATGGGGTAGCA | + |
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Preference number: 2 (lower is better) Translates to: LLFVCLQTLVSHLPIQHRYNCGS*NTHGVA Trigger: TGCTACCCCATGTGTGTTCCATGATCCACAGTTGTA...CCTGTGCTGTATTGGCAAGTGTGAGACAAGGGTCTGGAGACAGACAAACAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
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| 3UTR-3UTR CCA 90 bp | AATCCAGGTACACTATGCTCACAGAGGAAAGCAAGAACCCATCCTGTCTCATTCGCCCACCTGAGACTATaGACATGTGCCACAAAGTGT | + |
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Preference number: 2 (lower is better) Translates to: NPGTLCSQRKARTHPVSFAHLRL*TCATKC Trigger: ACACTTTGTGGCACATGTCCATAGTCTCAGGTGGGC...GAATGAGACAGGATGGGTTCTTGCTTTCCTCTGTGAGCATAGTGTACCTGGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGTTGGACAGGAGACAAGTTTTCTCACTTCAAGCAGAAATACAGGAAGAAAACAGGGTGGCTCTGCCTaGTTGCACTTTAGGATACCT | + |
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Preference number: 2 (lower is better) Translates to: RVGQETSFLTSSRNTGRKQGGSA*LHFRIP Trigger: AGGTATCCTAAAGTGCAAGCAGGCAGAGCCACCCTG...TTTTCTTCCTGTATTTCTGCTTGAAGTGAGAAAACTTGTCTCCTGTCCAACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000142193.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGTTGGACAGGAGACAAGTTTTCTCACTTCAAGCAGAAATACAGGAAGAAAAATCACCCTCTTTTTATaGAGGGCAGGGAGTCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: RVGQETSFLTSSRNTGRKITLFL*RAGSPQ Trigger: CTGGGGACTCCCTGCCCTGCATAAAAAGAGGGTGAT...TTTTCTTCCTGTATTTCTGCTTGAAGTGAGAAAACTTGTCTCCTGTCCAACCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000142193.8 |
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| 3UTR-3UTR GCA 90 bp | TTTGTCTGTCTCCAGACCCTTGTCTCACACTTGCCAATACAGCACAGGCTCAGAGAGTTCATTTTACAGTaGAGCAAGAAGAGCAGCTTA | + |
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Preference number: 2 (lower is better) Translates to: FVCLQTLVSHLPIQHRLREFILQ*SKKSSL Trigger: TAAGCTGCTCTTCTTGCTGCACTGTAAAATGAACTC...TCTGAGCCTGTGCTGTATTGGCAAGTGTGAGACAAGGGTCTGGAGACAGACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
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| 3UTR-3UTR CCA 90 bp | AGTATGTGTGAGAGAGTGATGATCACGAGAGAAGGACAAACTACACTGCAGACATTAAAGTGGACAGAGTaGACCTGGGTAAGTGCACCT | + |
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Preference number: 2 (lower is better) Translates to: SMCERVMITREGQTTLQTLKWTE*TWVSAP Trigger: AGGTGCACTTACCCAGGTCCACTCTGTCCACTTTAA...TGTCTGCAGTGTAGTTTGTCCTTCTCTCGTGATCATCACTCTCTCACACATACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
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| 3UTR-3UTR TCA 90 bp | AATATATTTTCAGCTACTAACCAACTGGGAGTCTGGAAAGGTTTATTCTCACAAGGCCTGGAAGACCCCTaGTGGCCACCTGACTTGTAT | + |
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Preference number: 2 (lower is better) Translates to: NIFSATNQLGVWKGLFSQGLEDP*WPPDLY Trigger: ATACAAGTCAGGTGGCCATCAGGGGTCTTCCAGGCC...TTGTGAGAATAAACCTTTCCAGACTCCCAGTTGGTTAGTAGCTGAAAATATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025840.16 |
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| 3UTR-3UTR TCA 90 bp | GAGAGAAGGACAAACTACACTGCAGACACATTGCTCCTTTGGAAAGCTGCTGCAGAACATTTGAACATTTaGGGGAAATCATCAGCTAAC | + |
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Preference number: 2 (lower is better) Translates to: ERRTNYTADTLLLWKAAAEHLNI*GKSSAN Trigger: GTTAGCTGATGATTTCCCTCAAATGTTCAAATGTTC...TGCAGCAGCTTTCCAAAGGAGCAATGTGTCTGCAGTGTAGTTTGTCCTTCTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
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| 3UTR-3UTR GCA 90 bp | TCTTCCAGTATAAACAGCTGCCAAAGGATGATCAATGAGAATGCCACAAATCCAACACAGCATCTTAGATaGTTGCATCACAGGCAGTGG | + |
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Preference number: 2 (lower is better) Translates to: SSSINSCQRMINENATNPTQHLR*LHHRQW Trigger: CCACTGCCTGTGATGCAAGCATCTAAGATGCTGTGT...TGGATTTGTGGCATTCTCATTGATCATCCTTTGGCAGCTGTTTATACTGGAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
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| 3UTR-3UTR GCA 90 bp | AGTATGTGTGAGAGAGTGATGATCACGAGAGAAGGACAAACTACACTGCAGACAAATCCAGGTACACTATaGTCACAGAGGAAAGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: SMCERVMITREGQTTLQTNPGTL*SQRKAR Trigger: TCTTGCTTTCCTCTGTGAGCATAGTGTACCTGGATT...TGTCTGCAGTGTAGTTTGTCCTTCTCTCGTGATCATCACTCTCTCACACATACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
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| 3UTR TCA 72 bp | CTGGGCACCAGCTTCCTCGGTGCAGATTCCCAGGGCTaGGGCTTGCCACAGGCATTCCCCTTTACCAGCTTG | + |
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Preference number: 3 (lower is better) Translates to: LGTSFLGADSQG*GLPQAFPFTSL Trigger: CAAGCTGGTAAAGGGGAATGCCTGTGGCAAGCCTCAGCCCTGGGAATCTGCACCGAGGAAGCTGGTGCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
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| 3UTR TCA 72 bp | TGGCCAGTACCATGCAGATCACTCAGACCTCACAGCTaGCCTGGCCATGATGCGCGGCCTCTGCTCCTCCCT | + |
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Preference number: 3 (lower is better) Translates to: WPVPCRSLRPHS*PGHDARPLLLP Trigger: AGGGAGGAGCAGAGGCCGCGCATCATGGCCAGGTCAGCTGTGAGGTCTGAGTGATCTGCATGGTACTGGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
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| 3UTR TCA 72 bp | TCACAGGCCTGGCCTGGAAGACCCCTGATGGCCACCTaGCTTGTATGTGATTTGGGCAGAGTCCACCTGAAG | + |
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Preference number: 3 (lower is better) Translates to: SQAWPGRPLMAT*LVCDLGRVHLK Trigger: CTTCAGGTGGACTCTGCCCAAATCACATACAAGTCAGGTGGCCATCAGGGGTCTTCCAGGCCAGGCCTGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000142193.8 |
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| 3UTR GCA 72 bp | AAGTGCACCTCATGCCCACCTGAGACTATGGACATGTaGCACAAAGTGTGTGCCAGGGACACAGAGGCAGCG | + |
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Preference number: 3 (lower is better) Translates to: KCTSCPPETMDM*HKVCARDTEAA Trigger: CGCTGCCTCTGTGTCCCTGGCACACACTTTGTGGCACATGTCCATAGTCTCAGGTGGGCATGAGGTGCACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
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| 3UTR-3UTR CAA 90 bp | CTGCACAGCCTTGATGCTATCAGCAGCAGCTGCAAGCTGCAGAAGCCATCTTGTGGAAGGTTAGTGATCTaGCTCTGGGGGCAGGGACAG | + |
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Preference number: 3 (lower is better) Translates to: LHSLDAISSSCKLQKPSCGRLVI*LWGQGQ Trigger: CTGTCCCTGCCCCCAGAGCAAGATCACTAACCTTCC...ACAAGATGGCTTCTGCAGCTTGCAGCTGCTGCTGATAGCATCAAGGCTGTGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
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| 3UTR TCA 72 bp | GCCTGGAAGACCCCTGATGGCCACCTGACTTGTATGTaGTTTGGGCAGAGTCCACCTGAAGAAGAGCCTAGC | + |
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Preference number: 3 (lower is better) Translates to: AWKTPDGHLTCM*FGQSPPEEEPS Trigger: GCTAGGCTCTTCTTCAGGTGGACTCTGCCCAAATCACATACAAGTCAGGTGGCCATCAGGGGTCTTCCAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000142193.8 |
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| 3UTR TCA 72 bp | CATATCTCCTGTCACAGGCCTGGCCTGGAAGACCCCTaGTGGCCACCTGACTTGTATGTGATTTGGGCAGAG | + |
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Preference number: 3 (lower is better) Translates to: HISCHRPGLEDP*WPPDLYVIWAE Trigger: CTCTGCCCAAATCACATACAAGTCAGGTGGCCATCAGGGGTCTTCCAGGCCAGGCCTGTGACAGGAGATATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000142193.8 |
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| 3UTR CCA 72 bp | ACCTGGGTAAGTGCACCTCATGCCCACCTGAGACTATaGACATGTGCCACAAAGTGTGTGCCAGGGACACAG | + |
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Preference number: 3 (lower is better) Translates to: TWVSAPHAHLRL*TCATKCVPGTQ Trigger: CTGTGTCCCTGGCACACACTTTGTGGCACATGTCCATAGTCTCAGGTGGGCATGAGGTGCACTTACCCAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
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| 3UTR TCA 72 bp | CAGGGTGGCTCTGCCTGCTTGCACTTTAGGATACCTTaGGTAGGCTGGCCAGTACCATGCAGATCACTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: QGGSACLHFRIP*VGWPVPCRSLR Trigger: TCTGAGTGATCTGCATGGTACTGGCCAGCCTACTCAAGGTATCCTAAAGTGCAAGCAGGCAGAGCCACCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000142193.8 |
||
| 3UTR GCA 72 bp | CACGGCATTAAAGTGGACAGAGTGGACCTGGGTAAGTaGACCTCATGCCCACCTGAGACTATGGACATGTGC | + |
|
Preference number: 3 (lower is better) Translates to: HGIKVDRVDLGK*TSCPPETMDMC Trigger: GCACATGTCCATAGTCTCAGGTGGGCATGAGGTGCACTTACCCAGGTCCACTCTGTCCACTTTAATGCCGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
||
| 3UTR GCA 72 bp | CTACACTGCAGACACATTGCTCCTTTGGAAAGCTGCTaGAGTGGAACTCCACAGAGCTGTGACTGTGGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: LHCRHIAPLESC*SGTPQSCDCGP Trigger: TGGCCCACAGTCACAGCTCTGTGGAGTTCCACTGCAGCAGCTTTCCAAAGGAGCAATGTGTCTGCAGTGTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
||
| 3UTR TCA 72 bp | ATAAGCCACCTCACCTTCTGGTGTCTGAGGTCACTGTaGCTGGTCAGCAGGCGACCGTGCAGCAGTAATTAT | + |
|
Preference number: 3 (lower is better) Translates to: ISHLTFWCLRSL*LVSRRPCSSNY Trigger: ATAATTACTGCTGCACGGTCGCCTGCTGACCAGTCACAGTGACCTCAGACACCAGAAGGTGAGGTGGCTTAT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000142193.8 |
||
| 3UTR GCA 72 bp | AAAGTGGACAGAGTGGACCTGGGTAAGTGCACCTCATaGCCACCTGAGACTATGGACATGTGCCACAAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: KVDRVDLGKCTS*PPETMDMCHKV Trigger: CACTTTGTGGCACATGTCCATAGTCTCAGGTGGGCATGAGGTGCACTTACCCAGGTCCACTCTGTCCACTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
||
| 3UTR CCA 72 bp | GAGTGCACACCAAGACAGAGCTACAACTGTGGATCATaGAACACACATGGGGTAGCAGAGAGTGGAGGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: ECTPRQSYNCGS*NTHGVAESGGE Trigger: TTCCCCTCCACTCTCTGCTACCCCATGTGTGTTCCATGATCCACAGTTGTAGCTCTGTCTTGGTGTGCACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
||
| 3UTR CCA 72 bp | AGCATACACACGGCATTAAAGTGGACAGAGTGGACCTaGGTAAGTGCACCTCATGCCCACCTGAGACTATGG | + |
|
Preference number: 3 (lower is better) Translates to: SIHTALKWTEWT*VSAPHAHLRLW Trigger: CCATAGTCTCAGGTGGGCATGAGGTGCACTTACCCAGGTCCACTCTGTCCACTTTAATGCCGTGTGTATGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
||
| 3UTR TCA 72 bp | TATTCTGGACATGACAGAGCATGGGGTGCTGTCTCCTaGTCACAACAAAGGTGTGGTGAGCCTTTCACACGG | + |
|
Preference number: 3 (lower is better) Translates to: YSGHDRAWGAVS*SQQRCGEPFTR Trigger: CCGTGTGAAAGGCTCACCACACCTTTGTTGTGATCAGGAGACAGCACCCCATGCTCTGTCATGTCCAGAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
||
| 3UTR TCA 72 bp | TACAGCACAGGCTCAGAGAGCACAGCTAACACACGGTaGCCTAACAGTTCTTACCAGGGTGCCCAGTTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: YSTGSESTANTR*PNSSYQGAQFN Trigger: ATTAAACTGGGCACCCTGGTAAGAACTGTTAGGTCACCGTGTGTTAGCTGTGCTCTCTGAGCCTGTGCTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
||
| 3UTR GCA 72 bp | TTCTGTTTGTCTGTCTCCAGACCCTTGTCTCACACTTaGCAATACAGCACAGGCTCAGAGAGCACAGCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: FCLSVSRPLSHT*QYSTGSESTAN Trigger: GTTAGCTGTGCTCTCTGAGCCTGTGCTGTATTGGCAAGTGTGAGACAAGGGTCTGGAGACAGACAAACAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
||
| 3UTR GCA 72 bp | CTAACAGTTCTTACCAGGGTGCCCAGTTTAATCAGCTaGAGCATACACACGGCATTAAAGTGGACAGAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: LTVLTRVPSLIS*SIHTALKWTEW Trigger: CCACTCTGTCCACTTTAATGCCGTGTGTATGCTGCAGCTGATTAAACTGGGCACCCTGGTAAGAACTGTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
||
| 3UTR GCA 72 bp | ATCACGAGAGAAGGACAAACTACACTGCAGACACATTaGTCCTTTGGAAAGCTGCTGCAGTGGAACTCCACA | + |
|
Preference number: 3 (lower is better) Translates to: ITREGQTTLQTH*SFGKLLQWNST Trigger: TGTGGAGTTCCACTGCAGCAGCTTTCCAAAGGAGCAATGTGTCTGCAGTGTAGTTTGTCCTTCTCTCGTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
||
| 3UTR GCA 72 bp | TGCACAGCCTTGATGCTATCAGCAGCAGCTGCAAGCTaGAGAAGCCATCTTGTTTCTTCTTCCAGTATAAAC | + |
|
Preference number: 3 (lower is better) Translates to: CTALMLSAAAAS*RSHLVSSSSIN Trigger: GTTTATACTGGAAGAAGAAACAAGATGGCTTCTGCAGCTTGCAGCTGCTGCTGATAGCATCAAGGCTGTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
||
| 3UTR CCA 72 bp | AGGCGACCGTGCAGCAGTAATTATGGAGAAGAGGGTTaGACAGGAGACAAGTTTTCTCACTTCAAGCAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: RRPCSSNYGEEG*TGDKFSHFKQK Trigger: TTTCTGCTTGAAGTGAGAAAACTTGTCTCCTGTCCAACCCTCTTCTCCATAATTACTGCTGCACGGTCGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000142193.8 |
||
| 3UTR GCA 72 bp | ATGATCAATGAGAATGCCACAAATCCAGGTACACTATaGTCACAGAGGAAAGCAAGAACCCATCCTGTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: MINENATNPGTL*SQRKARTHPVS Trigger: TGAGACAGGATGGGTTCTTGCTTTCCTCTGTGAGCATAGTGTACCTGGATTTGTGGCATTCTCATTGATCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
||
| 3UTR TCA 72 bp | TTCTTCCAGTATAAACAGCTGCCAAAGGATGATCAATaGGAATGCCACAAATCCAGGTACACTATGCTCACA | + |
|
Preference number: 3 (lower is better) Translates to: FFQYKQLPKDDQ*ECHKSRYTMLT Trigger: TGTGAGCATAGTGTACCTGGATTTGTGGCATTCTCATTGATCATCCTTTGGCAGCTGTTTATACTGGAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
||
| 3UTR CCA 72 bp | GTACTGAGACAAATATATTTTCAGCTACTAACCAACTaGGAGTCTGGAAAGGTTTATTCTCACAACAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: VLRQIYFQLLTN*ESGKVYSHNKT Trigger: TGTTTTGTTGTGAGAATAAACCTTTCCAGACTCCCAGTTGGTTAGTAGCTGAAAATATATTTGTCTCAGTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025840.16 |
||
| CDS-3UTR TCA 90 bp | CTCACAGCTGACCTGGCCATGATGCGCGGCCTCTGCTCCTCCCTGGGCACCAGCGTTCTTCAGGCAGCCTaGGCGCTTACAGTTGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: LTADLAMMRGLCSSLGTSVLQAA*ALTVAP Trigger: GGGTGCAACTGTAAGCGCTCAGGCTGCCTGAAGAAC...GCTGGTGCCCAGGGAGGAGCAGAGGCCGCGCATCATGGCCAGGTCAGCTGTGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGGCACCAGCTTCCTCGGTGCAGATTCCCAGGGCTGAGGCTTGCCACAGGCTCTGCTTCCTCACCCTaGGCCAGCAGGCAGGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: PGHQLPRCRFPGLRLATGSASSP*ASRQAH Trigger: ATGTGCCTGCCTGCTGGCCCAGGGTGAGGAAGCAGA...GCCTGTGGCAAGCCTCAGCCCTGGGAATCTGCACCGAGGAAGCTGGTGCCCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
||
| CDS-3UTR TCA 90 bp | TCAGACCTCACAGCTGACCTGGCCATGATGCGCGGCCTCTGCTCCTCCCTGGGCCTCTGCCTCCTGGGATaGTGGGAACTTGCAACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SDLTADLAMMRGLCSSLGLCLLG*WELATG Trigger: TCCTGTTGCAAGTTCCCATCATCCCAGGAGGCAGAG...GCCCAGGGAGGAGCAGAGGCCGCGCATCATGGCCAGGTCAGCTGTGAGGTCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025840.16 |
||
| CDS-3UTR GCA 90 bp | CACCAGCTTCCTCGGTGCAGATTCCCAGGGCTGAGGCTTGCCACAGGCATTCCCACAGTGCTCCTGCTCTaGTTCCTCACCCTGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HQLPRCRFPGLRLATGIPTVLLL*FLTLGQ Trigger: CTGGCCCAGGGTGAGGAAGCAGAGCAGGAGCACTGT...GGGAATGCCTGTGGCAAGCCTCAGCCCTGGGAATCTGCACCGAGGAAGCTGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
||
| CDS-3UTR CCA 90 bp | GGGCACCAGCTTCCTCGGTGCAGATTCCCAGGGCTGAGGCTTGCCACAGGCATTTCTGCTTCCTCACCCTaGGCCAGCAGGCAGGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: GHQLPRCRFPGLRLATGISASSP*ASRQAH Trigger: ATGTGCCTGCCTGCTGGCCCAGGGTGAGGAAGCAGA...AATGCCTGTGGCAAGCCTCAGCCCTGGGAATCTGCACCGAGGAAGCTGGTGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
||
| CDS-3UTR CCA 90 bp | CACCAGCTTCCTCGGTGCAGATTCCCAGGGCTGAGGCTTGCCACAGGCATTCCCTCTGCTTCCTCACCCTaGGCCAGCAGGCAGGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: HQLPRCRFPGLRLATGIPSASSP*ASRQAH Trigger: ATGTGCCTGCCTGCTGGCCCAGGGTGAGGAAGCAGA...GGGAATGCCTGTGGCAAGCCTCAGCCCTGGGAATCTGCACCGAGGAAGCTGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
||
| CDS-3UTR TCA 90 bp | GGGCACCAGCTTCCTCGGTGCAGATTCCCAGGGCTGAGGCTTGCCACAGGCATTGAAAGGCAGCCCCATTaGCAGCTGATGGGAGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GHQLPRCRFPGLRLATGIERQPH*QLMGEL Trigger: GAGCTCTCCCATCAGCTGTCAATGGGGCTGCCTTTC...AATGCCTGTGGCAAGCCTCAGCCCTGGGAATCTGCACCGAGGAAGCTGGTGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
||
| CDS-3UTR TCA 90 bp | GGGCACCAGCTTCCTCGGTGCAGATTCCCAGGGCTGAGGCTTGCCACAGGCATTGTTCTTCAGGCAGCCTaGGCGCTTACAGTTGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: GHQLPRCRFPGLRLATGIVLQAA*ALTVAP Trigger: GGGTGCAACTGTAAGCGCTCAGGCTGCCTGAAGAAC...AATGCCTGTGGCAAGCCTCAGCCCTGGGAATCTGCACCGAGGAAGCTGGTGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
||
| CDS-3UTR GCA 90 bp | AGTAGGCTGGCCAGTACCATGCAGATCACTCAGACCTCACAGCTGACCTGGCCAAGGGGCCTGGAAAGCTaGGTCTTCAGGGCTGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SRLASTMQITQTSQLTWPRGLES*VFRAAA Trigger: GGCGGCAGCCCTGAAGACGCAGCTTTCCAGGCCCCT...TGGCCAGGTCAGCTGTGAGGTCTGAGTGATCTGCATGGTACTGGCCAGCCTACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025840.16 |
||
| CDS-3UTR GCA 90 bp | CTCACAGCTGACCTGGCCATGATGCGCGGCCTCTGCTCCTCCCTGGGCACCAGCGGGACAAATAATGGCTaGTCTCAAAGTCCCCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LTADLAMMRGLCSSLGTSGTNNG*SQSPQA Trigger: AGCCTGGGGACTTTGAGAGCAGCCATTATTTGTCCC...GCTGGTGCCCAGGGAGGAGCAGAGGCCGCGCATCATGGCCAGGTCAGCTGTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
||
| CDS-3UTR GCA 90 bp | CAGCTTCCTCGGTGCAGATTCCCAGGGCTGAGGCTTGCCACAGGCATTCCCCTTACAGTGCTCCTGCTCTaGTTCCTCACCCTGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QLPRCRFPGLRLATGIPLTVLLL*FLTLGQ Trigger: CTGGCCCAGGGTGAGGAAGCAGAGCAGGAGCACTGT...AAGGGGAATGCCTGTGGCAAGCCTCAGCCCTGGGAATCTGCACCGAGGAAGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
||
| CDS-3UTR GCA 90 bp | CCTCACCTTCTGGTGTCTGAGGTCACTGTGACTGGTCAGCAGGCGACCGTGCAGACAGTGCTCCTGCTCTaGTTCCTCACCCTGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PHLLVSEVTVTGQQATVQTVLLL*FLTLGQ Trigger: CTGGCCCAGGGTGAGGAAGCAGAGCAGGAGCACTGT...CTGCACGGTCGCCTGCTGACCAGTCACAGTGACCTCAGACACCAGAAGGTGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000142193.8 |
||
| CDS-3UTR GCA 90 bp | CAGCTTCCTCGGTGCAGATTCCCAGGGCTGAGGCTTGCCACAGGCATTCCCCTTGGGGAACAGTGCTCCTaGTCTGCTTCCTCACCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QLPRCRFPGLRLATGIPLGEQCS*SASSPW Trigger: CCAGGGTGAGGAAGCAGAGCAGGAGCACTGTTCCCC...AAGGGGAATGCCTGTGGCAAGCCTCAGCCCTGGGAATCTGCACCGAGGAAGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
||
| CDS-3UTR GCA 90 bp | CCTGGGCACCAGCTTCCTCGGTGCAGATTCCCAGGGCTGAGGCTTGCCACAGGCTCCTCCAGGATCATCTaGTCAGCCAAGCTTGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PGHQLPRCRFPGLRLATGSSRII*SAKLGE Trigger: TTCCCCAAGCTTGGCTGAGCAGATGATCCTGGAGGA...GCCTGTGGCAAGCCTCAGCCCTGGGAATCTGCACCGAGGAAGCTGGTGCCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
||
| CDS-3UTR TCA 90 bp | GACATGTGCCACAAAGTGTGTGCCAGGGACACAGAGGCAGCGCTGCAACCCCTCGAAAGGCAGCCCCATTaGCAGCTGATGGGAGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: DMCHKVCARDTEAALQPLERQPH*QLMGEL Trigger: GAGCTCTCCCATCAGCTGTCAATGGGGCTGCCTTTC...GAGGGGTTGCAGCGCTGCCTCTGTGTCCCTGGCACACACTTTGTGGCACATGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
||
| CDS-3UTR GCA 90 bp | CCACCTCACCTTCTGGTGTCTGAGGTCACTGTGACTGGTCAGCAGGCGACCGTGTGCAGCTGCAGCTGTTaGAGAAGTCCCCGCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PPHLLVSEVTVTGQQATVCSCSC*RSPRWR Trigger: TCTCCAGCGGGGACTTCTGCAACAGCTGCAGCTGCA...CACGGTCGCCTGCTGACCAGTCACAGTGACCTCAGACACCAGAAGGTGAGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000142193.8 |
||
| CDS-3UTR GCA 90 bp | CCTGGGCACCAGCTTCCTCGGTGCAGATTCCCAGGGCTGAGGCTTGCCACAGGCGGGACAAATAATGGCTaGTCTCAAAGTCCCCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PGHQLPRCRFPGLRLATGGTNNG*SQSPQA Trigger: AGCCTGGGGACTTTGAGAGCAGCCATTATTTGTCCC...GCCTGTGGCAAGCCTCAGCCCTGGGAATCTGCACCGAGGAAGCTGGTGCCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
||
| CDS-3UTR CCA 90 bp | GGGCACCAGCTTCCTCGGTGCAGATTCCCAGGGCTGAGGCTTGCCACAGGCATTTGCAGAAGTCCCCGCTaGAGAAGCAGTCACAGTACC | + |
|
Preference number: 4 (lower is better) Translates to: GHQLPRCRFPGLRLATGICRSPR*RSSHST Trigger: GGTACTGTGACTGCTTCTCCAGCGGGGACTTCTGCA...AATGCCTGTGGCAAGCCTCAGCCCTGGGAATCTGCACCGAGGAAGCTGGTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
||
| CDS-3UTR TCA 90 bp | CCACCTCACCTTCTGGTGTCTGAGGTCACTGTGACTGGTCAGCAGGCGACCGTGTTGCAACAGGATTCCTaGGCCAGAGGGGCCTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PPHLLVSEVTVTGQQATVLQQDS*ARGAWK Trigger: TTTCCAGGCCCCTCTGGCTCAGGAATCCTGTTGCAA...CACGGTCGCCTGCTGACCAGTCACAGTGACCTCAGACACCAGAAGGTGAGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025840.16 |
||
| CDS-3UTR TCA 90 bp | CCTCACCTTCTGGTGTCTGAGGTCACTGTGACTGGTCAGCAGGCGACCGTGCAGTGGCTTAGGGAGCTCTaGCTGAGGGAAACTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PHLLVSEVTVTGQQATVQWLREL*LRETAL Trigger: CAGAGCAGTTTCCCTCAGTCAGAGCTCCCTAAGCCA...CTGCACGGTCGCCTGCTGACCAGTCACAGTGACCTCAGACACCAGAAGGTGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000142193.8 |
||
| CDS-3UTR TCA 90 bp | CACCAGCTTCCTCGGTGCAGATTCCCAGGGCTGAGGCTTGCCACAGGCATTCCCAGCCCCATTGACAGCTaGTGGGAGAGCTCCATTATC | + |
|
Preference number: 4 (lower is better) Translates to: HQLPRCRFPGLRLATGIPSPIDS*WESSII Trigger: GATAATGGAGCTCTCCCATCAGCTGTCAATGGGGCT...GGGAATGCCTGTGGCAAGCCTCAGCCCTGGGAATCTGCACCGAGGAAGCTGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
||
| CDS-3UTR GCA 90 bp | TGGGCACCAGCTTCCTCGGTGCAGATTCCCAGGGCTGAGGCTTGCCACAGGCATTCCTCCAGGATCATCTaGTCAGCCAAGCTTGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: WAPASSVQIPRAEACHRHSSRII*SAKLGE Trigger: TTCCCCAAGCTTGGCTGAGCAGATGATCCTGGAGGA...ATGCCTGTGGCAAGCCTCAGCCCTGGGAATCTGCACCGAGGAAGCTGGTGCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
||
| CDS-3UTR CCA 90 bp | AGTAGGCTGGCCAGTACCATGCAGATCACTCAGACCTCACAGCTGACCTGGCCAGCAGGCAGGCACATGTaGCCTCCACTACTTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SRLASTMQITQTSQLTWPAGRHM*PPLLPR Trigger: CCTGGGAAGTAGTGGAGGCCACATGTGCCTGCCTGC...TGGCCAGGTCAGCTGTGAGGTCTGAGTGATCTGCATGGTACTGGCCAGCCTACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
||
| CDS-3UTR TCA 90 bp | CCTCACCTTCTGGTGTCTGAGGTCACTGTGACTGGTCAGCAGGCGACCGTGCAGTTAGGGAGCTCTGACTaGGGGAAACTGCTCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PHLLVSEVTVTGQQATVQLGSSD*GKLLWS Trigger: TGACCAGAGCAGTTTCCCTCAGTCAGAGCTCCCTAA...CTGCACGGTCGCCTGCTGACCAGTCACAGTGACCTCAGACACCAGAAGGTGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000142193.8 |
||
| CDS-3UTR TCA 90 bp | CAGTACCATGCAGATCACTCAGACCTCACAGCTGACCTGGCCATGATGCGCGGCTGGCTTAGGGAGCTCTaGCTGAGGGAAACTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QYHADHSDLTADLAMMRGWLREL*LRETAL Trigger: CAGAGCAGTTTCCCTCAGTCAGAGCTCCCTAAGCCA...GCCGCGCATCATGGCCAGGTCAGCTGTGAGGTCTGAGTGATCTGCATGGTACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGCCAGTACCATGCAGATCACTCAGACCTCACAGCTGACCTGGCCATGATGTGCAGCTGCAGCTGTTaGAGAAGTCCCCGCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AGQYHADHSDLTADLAMMCSCSC*RSPRWR Trigger: TCTCCAGCGGGGACTTCTGCAACAGCTGCAGCTGCA...CATCATGGCCAGGTCAGCTGTGAGGTCTGAGTGATCTGCATGGTACTGGCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
||
| CDS-3UTR GCA 90 bp | CAGCTTCCTCGGTGCAGATTCCCAGGGCTGAGGCTTGCCACAGGCATTCCCCTTAAGCTTGGGGAACAGTaGTCCTGCTCTGCTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QLPRCRFPGLRLATGIPLKLGEQ*SCSASS Trigger: TGAGGAAGCAGAGCAGGAGCACTGTTCCCCAAGCTT...AAGGGGAATGCCTGTGGCAAGCCTCAGCCCTGGGAATCTGCACCGAGGAAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
||
| CDS-3UTR GCA 90 bp | TGGGCACCAGCTTCCTCGGTGCAGATTCCCAGGGCTGAGGCTTGCCACAGGCATTCGATGTGGAGAATCTaGGACAGGCACCTTCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: WAPASSVQIPRAEACHRHSMWRI*DRHLPN Trigger: GTTTGGAAGGTGCCTGTCGCAGATTCTCCACATCGA...ATGCCTGTGGCAAGCCTCAGCCCTGGGAATCTGCACCGAGGAAGCTGGTGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
||
| CDS-3UTR CCA 90 bp | CAGTACCATGCAGATCACTCAGACCTCACAGCTGACCTGGCCATGATGCGCGGCGCCTCCTCTGCCTCCTaGGATGATGGGAACTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QYHADHSDLTADLAMMRGASSAS*DDGNLQ Trigger: TTGCAAGTTCCCATCATCCCAGGAGGCAGAGGAGGC...GCCGCGCATCATGGCCAGGTCAGCTGTGAGGTCTGAGTGATCTGCATGGTACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025840.16 |
||
| CDS-3UTR TCA 90 bp | CACCAGCTTCCTCGGTGCAGATTCCCAGGGCTGAGGCTTGCCACAGGCATTCCCTACCACCTGCTTCTTTaGTTTCAACTGGGATCACGC | + |
|
Preference number: 4 (lower is better) Translates to: HQLPRCRFPGLRLATGIPYHLLL*FQLGSR Trigger: GCGTGATCCCAGTTGAAATCAAAGAAGCAGGTGGTA...GGGAATGCCTGTGGCAAGCCTCAGCCCTGGGAATCTGCACCGAGGAAGCTGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025840.16 |
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| CDS-3UTR TCA 90 bp | ACCTTGAGTAGGCTGGCCAGTACCATGCAGATCACTCAGACCTCACAGCTGACCGAAAGGCAGCCCCATTaGCAGCTGATGGGAGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TLSRLASTMQITQTSQLTERQPH*QLMGEL Trigger: GAGCTCTCCCATCAGCTGTCAATGGGGCTGCCTTTC...GGTCAGCTGTGAGGTCTGAGTGATCTGCATGGTACTGGCCAGCCTACTCAAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
||
| CDS-3UTR GCA 90 bp | AGTAGGCTGGCCAGTACCATGCAGATCACTCAGACCTCACAGCTGACCTGGCCAGCAGGTTGTTGCAGCTaGAGCTGTTGCAGAAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SRLASTMQITQTSQLTWPAGCCS*SCCRSP Trigger: GGGACTTCTGCAACAGCTGCAGCTGCAACAACCTGC...TGGCCAGGTCAGCTGTGAGGTCTGAGTGATCTGCATGGTACTGGCCAGCCTACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
||
| CDS-3UTR GCA 90 bp | GTGCAGATTCCCAGGGCTGAGGCTTGCCACAGGCATTCCCCTTTACCAGCTTGCAAGCTTGGGGAACAGTaGTCCTGCTCTGCTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VQIPRAEACHRHSPLPACKLGEQ*SCSASS Trigger: TGAGGAAGCAGAGCAGGAGCACTGTTCCCCAAGCTT...GCAAGCTGGTAAAGGGGAATGCCTGTGGCAAGCCTCAGCCCTGGGAATCTGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
||
| CDS-3UTR GCA 90 bp | CAGTACCATGCAGATCACTCAGACCTCACAGCTGACCTGGCCATGATGCGCGGCTCCTCCAGGATCATCTaGTCAGCCAAGCTTGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QYHADHSDLTADLAMMRGSSRII*SAKLGE Trigger: TTCCCCAAGCTTGGCTGAGCAGATGATCCTGGAGGA...GCCGCGCATCATGGCCAGGTCAGCTGTGAGGTCTGAGTGATCTGCATGGTACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
||
| CDS-3UTR GCA 90 bp | CCTCACCTTCTGGTGTCTGAGGTCACTGTGACTGGTCAGCAGGCGACCGTGCAGTCGATGTGGAGAATCTaGGACAGGCACCTTCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PHLLVSEVTVTGQQATVQSMWRI*DRHLPN Trigger: GTTTGGAAGGTGCCTGTCGCAGATTCTCCACATCGA...CTGCACGGTCGCCTGCTGACCAGTCACAGTGACCTCAGACACCAGAAGGTGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000142193.8 |
||
| CDS-3UTR GCA 90 bp | CCACCTCACCTTCTGGTGTCTGAGGTCACTGTGACTGGTCAGCAGGCGACCGTGTCGATGTGGAGAATCTaGGACAGGCACCTTCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PPHLLVSEVTVTGQQATVSMWRI*DRHLPN Trigger: GTTTGGAAGGTGCCTGTCGCAGATTCTCCACATCGA...CACGGTCGCCTGCTGACCAGTCACAGTGACCTCAGACACCAGAAGGTGAGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000142193.8 |
||
| CDS-3UTR CCA 90 bp | TGCACAGCCTTGATGCTATCAGCAGCAGCTGCAAGCTGCAGAAGCCATCTTGTTTCTTCCGAGGGCAGCTaGAGGCCTCCTCTGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CTALMLSAAAASCRSHLVSSEGS*RPPLPP Trigger: AGGAGGCAGAGGAGGCCTCCAGCTGCCCTCGGAAGA...AACAAGATGGCTTCTGCAGCTTGCAGCTGCTGCTGATAGCATCAAGGCTGTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGGCACCAGCTTCCTCGGTGCAGATTCCCAGGGCTGAGGCTTGCCACAGGCGCCTTTCCCCATTTTTaGTTGGAAAGCTTCAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: PGHQLPRCRFPGLRLATGAFPHF*LESFRI Trigger: AATCCTGAAGCTTTCCAACCAAAAATGGGGAAAGGC...GCCTGTGGCAAGCCTCAGCCCTGGGAATCTGCACCGAGGAAGCTGGTGCCCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
||
| CDS-3UTR TCA 90 bp | CTGCACAGCCTTGATGCTATCAGCAGCAGCTGCAAGCTGCAGAAGCCATCTTGTGCGCCTCCTTTCAGCTaGCAAATCACCATGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LHSLDAISSSCKLQKPSCAPPFS*QITMGL Trigger: CAGCCCCATGGTGATTTGTCAGCTGAAAGGAGGCGC...ACAAGATGGCTTCTGCAGCTTGCAGCTGCTGCTGATAGCATCAAGGCTGTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
||
| CDS-3UTR TCA 90 bp | AGTAGGCTGGCCAGTACCATGCAGATCACTCAGACCTCACAGCTGACCTGGCCATTAGGGAGCTCTGACTaGGGGAAACTGCTCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SRLASTMQITQTSQLTWPLGSSD*GKLLWS Trigger: TGACCAGAGCAGTTTCCCTCAGTCAGAGCTCCCTAA...TGGCCAGGTCAGCTGTGAGGTCTGAGTGATCTGCATGGTACTGGCCAGCCTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
||
| CDS-3UTR GCA 90 bp | AGTTTAATCAGCTGCAGCATACACACGGCATTAAAGTGGACAGAGTGGACCTGGAGGGGCCTGGAAAGCTaGGTCTTCAGGGCTGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLISCSIHTALKWTEWTWRGLES*VFRAAA Trigger: GGCGGCAGCCCTGAAGACGCAGCTTTCCAGGCCCCT...CCAGGTCCACTCTGTCCACTTTAATGCCGTGTGTATGCTGCAGCTGATTAAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
||
| CDS-3UTR TCA 90 bp | ACCTTGAGTAGGCTGGCCAGTACCATGCAGATCACTCAGACCTCACAGCTGACCAGCCCCATTGACAGCTaGTGGGAGAGCTCCATTATC | + |
|
Preference number: 4 (lower is better) Translates to: TLSRLASTMQITQTSQLTSPIDS*WESSII Trigger: GATAATGGAGCTCTCCCATCAGCTGTCAATGGGGCT...GGTCAGCTGTGAGGTCTGAGTGATCTGCATGGTACTGGCCAGCCTACTCAAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
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| CDS-3UTR GCA 90 bp | GAGAGAAGGACAAACTACACTGCAGACACATTGCTCCTTTGGAAAGCTGCTGCACTGCGTCTTCAGGGCTaGCGCCTGGCACACTACCAC | + |
|
Preference number: 4 (lower is better) Translates to: ERRTNYTADTLLLWKAAALRLQG*RLAHYH Trigger: GTGGTAGTGTGCCAGGCGGCAGCCCTGAAGACGCAG...TGCAGCAGCTTTCCAAAGGAGCAATGTGTCTGCAGTGTAGTTTGTCCTTCTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
||
| CDS-3UTR CCA 90 bp | AGTAGGCTGGCCAGTACCATGCAGATCACTCAGACCTCACAGCTGACCTGGCCAGAGGTCCTGAGAACTTaGCTGGGGACAAATAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: SRLASTMQITQTSQLTWPEVLRT*LGTNNG Trigger: GCCATTATTTGTCCCCAGCCAAGTTCTCAGGACCTC...TGGCCAGGTCAGCTGTGAGGTCTGAGTGATCTGCATGGTACTGGCCAGCCTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
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| CDS-3UTR TCA 90 bp | GTGGAGGGGAAGCCAGGGCCTACCACTAATATACCCACAGGAAGGTTAGTGATCTTAGGGAGCTCTGACTaGGGGAAACTGCTCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VEGKPGPTTNIPTGRLVILGSSD*GKLLWS Trigger: TGACCAGAGCAGTTTCCCTCAGTCAGAGCTCCCTAA...GATCACTAACCTTCCTGTGGGTATATTAGTGGTAGGCCCTGGCTTCCCCTCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
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| CDS-3UTR CCA 90 bp | TTGAGTAGGCTGGCCAGTACCATGCAGATCACTCAGACCTCACAGCTGACCTGGCAGACAGAGTTATTTTaGGTGGCCCTTGCAGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSRLASTMQITQTSQLTWQTELF*VALAEQ Trigger: CTGCTCTGCAAGGGCCACCCAAAATAACTCTGTCTG...CCAGGTCAGCTGTGAGGTCTGAGTGATCTGCATGGTACTGGCCAGCCTACTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
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| CDS-3UTR CCA 90 bp | CCACCTCACCTTCTGGTGTCTGAGGTCACTGTGACTGGTCAGCAGGCGACCGTGGCCTTTCCCCATTTTTaGTTGGAAAGCTTCAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: PPHLLVSEVTVTGQQATVAFPHF*LESFRI Trigger: AATCCTGAAGCTTTCCAACCAAAAATGGGGAAAGGC...CACGGTCGCCTGCTGACCAGTCACAGTGACCTCAGACACCAGAAGGTGAGGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000142193.8 |
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| CDS-3UTR CCA 90 bp | CAGTACCATGCAGATCACTCAGACCTCACAGCTGACCTGGCCATGATGCGCGGCGCCTTTCCCCATTTTTaGTTGGAAAGCTTCAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: QYHADHSDLTADLAMMRGAFPHF*LESFRI Trigger: AATCCTGAAGCTTTCCAACCAAAAATGGGGAAAGGC...GCCGCGCATCATGGCCAGGTCAGCTGTGAGGTCTGAGTGATCTGCATGGTACTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
||
| CDS-3UTR TCA 90 bp | CAAGAAGAGCAGCTTACACAGCATCTTAGATGCTTGCATCACAGGCAGTGGCTTTGGCTTAGGGAGCTCTaGCTGAGGGAAACTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QEEQLTQHLRCLHHRQWLWLREL*LRETAL Trigger: CAGAGCAGTTTCCCTCAGTCAGAGCTCCCTAAGCCA...AAGCCACTGCCTGTGATGCAAGCATCTAAGATGCTGTGTAAGCTGCTCTTCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
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| CDS-3UTR TCA 90 bp | CAGTGCAGCAAGAAGAGCAGCTTACACAGCATCTTAGATGCTTGCATCACAGGCAGCCCCATTGACAGCTaGTGGGAGAGCTCCATTATC | + |
|
Preference number: 4 (lower is better) Translates to: QCSKKSSLHSILDACITGSPIDS*WESSII Trigger: GATAATGGAGCTCTCCCATCAGCTGTCAATGGGGCT...GCCTGTGATGCAAGCATCTAAGATGCTGTGTAAGCTGCTCTTCTTGCTGCACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
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| CDS-3UTR TCA 90 bp | GGCCAGTACCATGCAGATCACTCAGACCTCACAGCTGACCTGGCCATGATGCGCAAATGGAAGAACACATaGTTTTGGCCTCATAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: GQYHADHSDLTADLAMMRKWKNT*FWPHST Trigger: AGTGCTATGAGGCCAAAATCATGTGTTCTTCCATTT...GCGCATCATGGCCAGGTCAGCTGTGAGGTCTGAGTGATCTGCATGGTACTGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
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| CDS-3UTR GCA 90 bp | GGAGAAGAGGGTTGGACAGGAGACAAGTTTTCTCACTTCAAGCAGAAATACAGGTGCAGCTGCAGCTGTTaGAGAAGTCCCCGCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GEEGWTGDKFSHFKQKYRCSCSC*RSPRWR Trigger: TCTCCAGCGGGGACTTCTGCAACAGCTGCAGCTGCA...CCTGTATTTCTGCTTGAAGTGAGAAAACTTGTCTCCTGTCCAACCCTCTTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000142193.8 |
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| CDS-3UTR CCA 90 bp | CAAAACACAAAGTGTGGGCATAATAAGCCACCTCACCTTCTGGTGTCTGAGGTCTGCAGAAGTCCCCGCTaGAGAAGCAGTCACAGTACC | + |
|
Preference number: 4 (lower is better) Translates to: QNTKCGHNKPPHLLVSEVCRSPR*RSSHST Trigger: GGTACTGTGACTGCTTCTCCAGCGGGGACTTCTGCA...GACCTCAGACACCAGAAGGTGAGGTGGCTTATTATGCCCACACTTTGTGTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000142193.8 |
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| CDS-3UTR CCA 90 bp | TCTCACAACAAAACACAAAGTGTGGGCATAATAAGCCACCTCACCTTCTGGTGTGCAGGCAGGCACATGTaGCCTCCACTACTTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SHNKTQSVGIISHLTFWCAGRHM*PPLLPR Trigger: CCTGGGAAGTAGTGGAGGCCACATGTGCCTGCCTGC...ACACCAGAAGGTGAGGTGGCTTATTATGCCCACACTTTGTGTTTTGTTGTGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000142193.8 |
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| 3UTR CAA 72 bp | AGGCCATCTGACTTCTGTTTGTCTGTCTCCAGACCCTaGTCTCACACTTGCCAATACAGCACAGGCTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RPSDFCLSVSRP*SHTCQYSTGSE Trigger: CTCTGAGCCTGTGCTGTATTGGCAAGTGTGAGACAAGGGTCTGGAGACAGACAAACAGAAGTCAGATGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
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| CDS-3UTR TCA 90 bp | AATCCAGGTACACTATGCTCACAGAGGAAAGCAAGAACCCATCCTGTCTCATTCTTGCAACAGGATTCCTaGGCCAGAGGGGCCTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: NPGTLCSQRKARTHPVSFLQQDS*ARGAWK Trigger: TTTCCAGGCCCCTCTGGCTCAGGAATCCTGTTGCAA...GAATGAGACAGGATGGGTTCTTGCTTTCCTCTGTGAGCATAGTGTACCTGGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
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| CDS-3UTR TCA 90 bp | TCTCACAACAAAACACAAAGTGTGGGCATAATAAGCCACCTCACCTTCTGGTGTGCGCCTCCTTTCAGCTaGCAAATCACCATGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SHNKTQSVGIISHLTFWCAPPFS*QITMGL Trigger: CAGCCCCATGGTGATTTGTCAGCTGAAAGGAGGCGC...ACACCAGAAGGTGAGGTGGCTTATTATGCCCACACTTTGTGTTTTGTTGTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025840.16 |
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| CDS-3UTR TCA 90 bp | GCTGGCCAGTACCATGCAGATCACTCAGACCTCACAGCTGACCTGGCCATGATGAAATGGAAGAACACATaGTTTTGGCCTCATAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: AGQYHADHSDLTADLAMMKWKNT*FWPHST Trigger: AGTGCTATGAGGCCAAAATCATGTGTTCTTCCATTT...CATCATGGCCAGGTCAGCTGTGAGGTCTGAGTGATCTGCATGGTACTGGCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
||
| CDS-3UTR TCA 90 bp | AGTAGGCTGGCCAGTACCATGCAGATCACTCAGACCTCACAGCTGACCTGGCCAAAATGGAAGAACACATaGTTTTGGCCTCATAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: SRLASTMQITQTSQLTWPKWKNT*FWPHST Trigger: AGTGCTATGAGGCCAAAATCATGTGTTCTTCCATTT...TGGCCAGGTCAGCTGTGAGGTCTGAGTGATCTGCATGGTACTGGCCAGCCTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
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| CDS-3UTR GCA 90 bp | AATTATGGAGAAGAGGGTTGGACAGGAGACAAGTTTTCTCACTTCAAGCAGAAACTGCGTCTTCAGGGCTaGCGCCTGGCACACTACCAC | + |
|
Preference number: 4 (lower is better) Translates to: NYGEEGWTGDKFSHFKQKLRLQG*RLAHYH Trigger: GTGGTAGTGTGCCAGGCGGCAGCCCTGAAGACGCAG...TTTCTGCTTGAAGTGAGAAAACTTGTCTCCTGTCCAACCCTCTTCTCCATAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025840.16 |
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| CDS-3UTR CCA 90 bp | AATTATGGAGAAGAGGGTTGGACAGGAGACAAGTTTTCTCACTTCAAGCAGAAATCTTCCGAGGGCAGCTaGAGGCCTCCTCTGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NYGEEGWTGDKFSHFKQKSSEGS*RPPLPP Trigger: AGGAGGCAGAGGAGGCCTCCAGCTGCCCTCGGAAGA...TTTCTGCTTGAAGTGAGAAAACTTGTCTCCTGTCCAACCCTCTTCTCCATAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025840.16 |
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| 3UTR CAA 72 bp | GAGAAGGACAAACTACACTGCAGACACATTGCTCCTTaGGAAAGCTGCTGCAGTGGAACTCCACAGAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: EKDKLHCRHIAP*ESCCSGTPQSC Trigger: ACAGCTCTGTGGAGTTCCACTGCAGCAGCTTTCCAAAGGAGCAATGTGTCTGCAGTGTAGTTTGTCCTTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
||
| 3UTR CAA 72 bp | GATCACGAGAGAAGGACAAACTACACTGCAGACACATaGCTCCTTTGGAAAGCTGCTGCAGTGGAACTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: DHERRTNYTADT*LLWKAAAVELH Trigger: GTGGAGTTCCACTGCAGCAGCTTTCCAAAGGAGCAATGTGTCTGCAGTGTAGTTTGTCCTTCTCTCGTGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
||
| CDS-3UTR TCA 90 bp | TCTCACAACAAAACACAAAGTGTGGGCATAATAAGCCACCTCACCTTCTGGTGTTGGCTTAGGGAGCTCTaGCTGAGGGAAACTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SHNKTQSVGIISHLTFWCWLREL*LRETAL Trigger: CAGAGCAGTTTCCCTCAGTCAGAGCTCCCTAAGCCA...ACACCAGAAGGTGAGGTGGCTTATTATGCCCACACTTTGTGTTTTGTTGTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000142193.8 |
||
| CDS-3UTR TCA 90 bp | GGAGAAGAGGGTTGGACAGGAGACAAGTTTTCTCACTTCAAGCAGAAATACAGGAGCCCCATTGACAGCTaGTGGGAGAGCTCCATTATC | + |
|
Preference number: 4 (lower is better) Translates to: GEEGWTGDKFSHFKQKYRSPIDS*WESSII Trigger: GATAATGGAGCTCTCCCATCAGCTGTCAATGGGGCT...CCTGTATTTCTGCTTGAAGTGAGAAAACTTGTCTCCTGTCCAACCCTCTTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000142193.8 |
||
| CDS-3UTR GCA 90 bp | TCTCACAACAAAACACAAAGTGTGGGCATAATAAGCCACCTCACCTTCTGGTGTGCAGGTTGTTGCAGCTaGAGCTGTTGCAGAAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SHNKTQSVGIISHLTFWCAGCCS*SCCRSP Trigger: GGGACTTCTGCAACAGCTGCAGCTGCAACAACCTGC...ACACCAGAAGGTGAGGTGGCTTATTATGCCCACACTTTGTGTTTTGTTGTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000142193.8 |
||
| CDS-3UTR GCA 90 bp | AGGGTTGGACAGGAGACAAGTTTTCTCACTTCAAGCAGAAATACAGGAAGAAAAGGGGAACAGTGCTCCTaGTCTGCTTCCTCACCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RVGQETSFLTSSRNTGRKGEQCS*SASSPW Trigger: CCAGGGTGAGGAAGCAGAGCAGGAGCACTGTTCCCC...TTTTCTTCCTGTATTTCTGCTTGAAGTGAGAAAACTTGTCTCCTGTCCAACCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000142193.8 |
||
| CDS-3UTR CCA 90 bp | CAAAACACAAAGTGTGGGCATAATAAGCCACCTCACCTTCTGGTGTCTGAGGTCGAGGTCCTGAGAACTTaGCTGGGGACAAATAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: QNTKCGHNKPPHLLVSEVEVLRT*LGTNNG Trigger: GCCATTATTTGTCCCCAGCCAAGTTCTCAGGACCTC...GACCTCAGACACCAGAAGGTGAGGTGGCTTATTATGCCCACACTTTGTGTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000142193.8 |
||
| CDS-3UTR CCA 90 bp | AGGGTTGGACAGGAGACAAGTTTTCTCACTTCAAGCAGAAATACAGGAAGAAAAGCAGGCAGGCACATGTaGCCTCCACTACTTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RVGQETSFLTSSRNTGRKAGRHM*PPLLPR Trigger: CCTGGGAAGTAGTGGAGGCCACATGTGCCTGCCTGC...TTTTCTTCCTGTATTTCTGCTTGAAGTGAGAAAACTTGTCTCCTGTCCAACCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000142193.8 |
||
| 3UTR CAA 72 bp | AATACTGTCTGTATCCGGAGGCCATCTGACTTCTGTTaGTCTGTCTCCAGACCCTTGTCTCACACTTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: NTVCIRRPSDFC*SVSRPLSHTCQ Trigger: TTGGCAAGTGTGAGACAAGGGTCTGGAGACAGACAAACAGAAGTCAGATGGCCTCCGGATACAGACAGTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
||
| CDS-3UTR TCA 90 bp | AGTTTAATCAGCTGCAGCATACACACGGCATTAAAGTGGACAGAGTGGACCTGGTACCACCTGCTTCTTTaGTTTCAACTGGGATCACGC | + |
|
Preference number: 4 (lower is better) Translates to: SLISCSIHTALKWTEWTWYHLLL*FQLGSR Trigger: GCGTGATCCCAGTTGAAATCAAAGAAGCAGGTGGTA...CCAGGTCCACTCTGTCCACTTTAATGCCGTGTGTATGCTGCAGCTGATTAAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
||
| CDS-3UTR TCA 90 bp | GAGGGTTGGACAGGAGACAAGTTTTCTCACTTCAAGCAGAAATACAGGAAGAAATTAGGGAGCTCTGACTaGGGGAAACTGCTCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: EGWTGDKFSHFKQKYRKKLGSSD*GKLLWS Trigger: TGACCAGAGCAGTTTCCCTCAGTCAGAGCTCCCTAA...TTTCTTCCTGTATTTCTGCTTGAAGTGAGAAAACTTGTCTCCTGTCCAACCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000142193.8 |
||
| CDS-3UTR GCA 90 bp | AATTATGGAGAAGAGGGTTGGACAGGAGACAAGTTTTCTCACTTCAAGCAGAAAGCAGGTTGTTGCAGCTaGAGCTGTTGCAGAAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: NYGEEGWTGDKFSHFKQKAGCCS*SCCRSP Trigger: GGGACTTCTGCAACAGCTGCAGCTGCAACAACCTGC...TTTCTGCTTGAAGTGAGAAAACTTGTCTCCTGTCCAACCCTCTTCTCCATAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000142193.8 |
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| CDS-3UTR CCA 90 bp | TCTTCCAGTATAAACAGCTGCCAAAGGATGATCAATGAGAATGCCACAAATCCAGCCTCCTCTGCCTCCTaGGATGATGGGAACTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SSSINSCQRMINENATNPASSAS*DDGNLQ Trigger: TTGCAAGTTCCCATCATCCCAGGAGGCAGAGGAGGC...TGGATTTGTGGCATTCTCATTGATCATCCTTTGGCAGCTGTTTATACTGGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
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| CDS-3UTR CCA 90 bp | AGGGTTGGACAGGAGACAAGTTTTCTCACTTCAAGCAGAAATACAGGAAGAAAATGCAGAAGTCCCCGCTaGAGAAGCAGTCACAGTACC | + |
|
Preference number: 4 (lower is better) Translates to: RVGQETSFLTSSRNTGRKCRSPR*RSSHST Trigger: GGTACTGTGACTGCTTCTCCAGCGGGGACTTCTGCA...TTTTCTTCCTGTATTTCTGCTTGAAGTGAGAAAACTTGTCTCCTGTCCAACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000142193.8 |
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| CDS-3UTR GCA 90 bp | GAGGGTTGGACAGGAGACAAGTTTTCTCACTTCAAGCAGAAATACAGGAAGAAAGGGATGATGGGAACTTaGAACAGGATTCCTGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EGWTGDKFSHFKQKYRKKGMMGT*NRIPEP Trigger: TGGCTCAGGAATCCTGTTGCAAGTTCCCATCATCCC...TTTCTTCCTGTATTTCTGCTTGAAGTGAGAAAACTTGTCTCCTGTCCAACCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025840.16 |
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| CDS-3UTR CCA 90 bp | GAGGGTTGGACAGGAGACAAGTTTTCTCACTTCAAGCAGAAATACAGGAAGAAAGAGGTCCTGAGAACTTaGCTGGGGACAAATAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: EGWTGDKFSHFKQKYRKKEVLRT*LGTNNG Trigger: GCCATTATTTGTCCCCAGCCAAGTTCTCAGGACCTC...TTTCTTCCTGTATTTCTGCTTGAAGTGAGAAAACTTGTCTCCTGTCCAACCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000142193.8 |
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| CDS-3UTR GCA 90 bp | AATATATTTTCAGCTACTAACCAACTGGGAGTCTGGAAAGGTTTATTCTCACAAAAGCTTGGGGAACAGTaGTCCTGCTCTGCTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NIFSATNQLGVWKGLFSQKLGEQ*SCSASS Trigger: TGAGGAAGCAGAGCAGGAGCACTGTTCCCCAAGCTT...TTGTGAGAATAAACCTTTCCAGACTCCCAGTTGGTTAGTAGCTGAAAATATATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025840.16 |
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| CDS-3UTR CAA 90 bp | CTCACAGCTGACCTGGCCATGATGCGCGGCCTCTGCTCCTCCCTGGGCACCAGCTTGCAGCTGCAGCTGTaGCAGAAGTCCCCGCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LTADLAMMRGLCSSLGTSLQLQL*QKSPLE Trigger: CTCCAGCGGGGACTTCTGCAACAGCTGCAGCTGCAA...GCTGGTGCCCAGGGAGGAGCAGAGGCCGCGCATCATGGCCAGGTCAGCTGTGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
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| CDS-3UTR CAA 90 bp | CTCACAGCTGACCTGGCCATGATGCGCGGCCTCTGCTCCTCCCTGGGCACCAGCTCTGCTCAGCCAAGCTaGGGGAACAGTGCTCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LTADLAMMRGLCSSLGTSSAQPS*GNSAPA Trigger: AGCAGGAGCACTGTTCCCCAAGCTTGGCTGAGCAGA...GCTGGTGCCCAGGGAGGAGCAGAGGCCGCGCATCATGGCCAGGTCAGCTGTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
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| CDS-3UTR CAA 90 bp | CCTGGGCACCAGCTTCCTCGGTGCAGATTCCCAGGGCTGAGGCTTGCCACAGGCAGCTCATGGCGCAGGTaGTTGCAGCTGCAGCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PGHQLPRCRFPGLRLATGSSWRR*LQLQLL Trigger: CAACAGCTGCAGCTGCAACAACCTGCGCCATGAGCT...GCCTGTGGCAAGCCTCAGCCCTGGGAATCTGCACCGAGGAAGCTGGTGCCCAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
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| CDS GCA 90 bp | CAGGATCATCTGCTCAGCCAAGCTTGGGGAACAGTGCTCCTGCTCTaGTTCCTCACCCTGGGCCAGCAGGCAGGCACATGTGGCCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: QDHLLSQAWGTVLLL*FLTLGQQAGTCGLH Trigger: GTGGAGGCCACATGTGCCTGCCTGCTGGCCCAGGGTGAGGAAGCAGAGCAGGAGCACTGTTCCCCAAGCTTGGCTGAGCAGATGATCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
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| CDS GCA 90 bp | TCCTCCAGGATCATCTGCTCAGCCAAGCTTGGGGAACAGTGCTCCTaGTCTGCTTCCTCACCCTGGGCCAGCAGGCAGGCACATGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SSRIICSAKLGEQCS*SASSPWASRQAHVA Trigger: GGCCACATGTGCCTGCCTGCTGGCCCAGGGTGAGGAAGCAGAGCAGGAGCACTGTTCCCCAAGCTTGGCTGAGCAGATGATCCTGGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
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| CDS CCA 90 bp | TCAGCCAAGCTTGGGGAACAGTGCTCCTGCTCTGCTTCCTCACCCTaGGCCAGCAGGCAGGCACATGTGGCCTCCACTACTTCCCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SAKLGEQCSCSASSP*ASRQAHVASTTSQE Trigger: CTCCTGGGAAGTAGTGGAGGCCACATGTGCCTGCCTGCTGGCCCAGGGTGAGGAAGCAGAGCAGGAGCACTGTTCCCCAAGCTTGGCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
||
| CDS-3UTR CAA 90 bp | CACCAGCTTCCTCGGTGCAGATTCCCAGGGCTGAGGCTTGCCACAGGCATTCCCTATTTTGGGTGGCCCTaGCAGAGCAGGTCCAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: HQLPRCRFPGLRLATGIPYFGWP*QSRSRG Trigger: CCCTCTGGACCTGCTCTGCAAGGGCCACCCAAAATA...GGGAATGCCTGTGGCAAGCCTCAGCCCTGGGAATCTGCACCGAGGAAGCTGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
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| CDS-3UTR CAA 90 bp | CCTCACCTTCTGGTGTCTGAGGTCACTGTGACTGGTCAGCAGGCGACCGTGCAGTTGCAGCTGCAGCTGTaGCAGAAGTCCCCGCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PHLLVSEVTVTGQQATVQLQLQL*QKSPLE Trigger: CTCCAGCGGGGACTTCTGCAACAGCTGCAGCTGCAA...CTGCACGGTCGCCTGCTGACCAGTCACAGTGACCTCAGACACCAGAAGGTGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000142193.8 |
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| CDS CCA 90 bp | CTGAGCCAGAGGGGCCTGGAAAGCTGCGTCTTCAGGGCTGCCGCCTaGCACACTACCACCTGCTTCTTTGATTTCAACTGGGATCACGCG | + |
|
Preference number: 5 (lower is better) Translates to: LSQRGLESCVFRAAA*HTTTCFFDFNWDHA Trigger: CGCGTGATCCCAGTTGAAATCAAAGAAGCAGGTGGTAGTGTGCCAGGCGGCAGCCCTGAAGACGCAGCTTTCCAGGCCCCTCTGGCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000151341.8 |
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| CDS TCA 90 bp | CTGCGTCTTCAGGGCTGCCGCCTGGCACACTACCACCTGCTTCTTTaGTTTCAACTGGGATCACGCGCACTCCTGCGCTTAGCGGCAACA | + |
|
Preference number: 5 (lower is better) Translates to: LRLQGCRLAHYHLLL*FQLGSRALLRLAAT Trigger: TGTTGCCGCTAAGCGCAGGAGTGCGCGTGATCCCAGTTGAAATCAAAGAAGCAGGTGGTAGTGTGCCAGGCGGCAGCCCTGAAGACGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000151341.8 |
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| CDS-3UTR CAA 90 bp | GTGCAGATTCCCAGGGCTGAGGCTTGCCACAGGCATTCCCCTTTACCAGCTTGCGGAAAGGCAGCCCCATaGACAGCTGATGGGAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VQIPRAEACHRHSPLPACGKAAP*TADGRA Trigger: AGCTCTCCCATCAGCTGTCAATGGGGCTGCCTTTCC...GCAAGCTGGTAAAGGGGAATGCCTGTGGCAAGCCTCAGCCCTGGGAATCTGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
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| CDS-3UTR CAA 90 bp | GGCCAGTACCATGCAGATCACTCAGACCTCACAGCTGACCTGGCCATGATGCGCAGCTCATGGCGCAGGTaGTTGCAGCTGCAGCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GQYHADHSDLTADLAMMRSSWRR*LQLQLL Trigger: CAACAGCTGCAGCTGCAACAACCTGCGCCATGAGCT...GCGCATCATGGCCAGGTCAGCTGTGAGGTCTGAGTGATCTGCATGGTACTGGCC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
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| CDS TCA 90 bp | GGAAACTGCTCTGGTCATCGTACTGAGGAAGCAGATGGAGCGCTTTaGGCTCCCTCGCGCCACAGTTGTCTATGCAGAGCATCTGGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: GNCSGHRTEEADGAL*APSRHSCLCRASGR Trigger: GCGCCCAGATGCTCTGCATAGACAACTGTGGCGCGAGGGAGCTCAAAGCGCTCCATCTGCTTCCTCAGTACGATGACCAGAGCAGTTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 ENSMUST00000151341.8 |
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| CDS-3UTR CAA 90 bp | GCTGGCCAGTACCATGCAGATCACTCAGACCTCACAGCTGACCTGGCCATGATGGGAAAGGCAGCCCCATaGACAGCTGATGGGAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: AGQYHADHSDLTADLAMMGKAAP*TADGRA Trigger: AGCTCTCCCATCAGCTGTCAATGGGGCTGCCTTTCC...CATCATGGCCAGGTCAGCTGTGAGGTCTGAGTGATCTGCATGGTACTGGCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
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| CDS-3UTR CAA 90 bp | AGTAGGCTGGCCAGTACCATGCAGATCACTCAGACCTCACAGCTGACCTGGCCATCATGGCGCAGGTTGTaGCAGCTGCAGCTGTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SRLASTMQITQTSQLTWPSWRRL*QLQLLQ Trigger: CTGCAACAGCTGCAGCTGCAACAACCTGCGCCATGA...TGGCCAGGTCAGCTGTGAGGTCTGAGTGATCTGCATGGTACTGGCCAGCCTACT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
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| CDS-3UTR CAA 90 bp | AGTAGGCTGGCCAGTACCATGCAGATCACTCAGACCTCACAGCTGACCTGGCCATCTGCTCAGCCAAGCTaGGGGAACAGTGCTCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SRLASTMQITQTSQLTWPSAQPS*GNSAPA Trigger: AGCAGGAGCACTGTTCCCCAAGCTTGGCTGAGCAGA...TGGCCAGGTCAGCTGTGAGGTCTGAGTGATCTGCATGGTACTGGCCAGCCTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
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| CDS CCA 90 bp | CATGGCGCAGGTTGTTGCAGCTGCAGCTGTTGCAGAAGTCCCCGCTaGAGAAGCAGTCACAGTACCCAGACAGAGTTATTTTGGGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: HGAGCCSCSCCRSPR*RSSHSTQTELFWVA Trigger: GGCCACCCAAAATAACTCTGTCTGGGTACTGTGACTGCTTCTCCAGCGGGGACTTCTGCAACAGCTGCAGCTGCAACAACCTGCGCCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
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| CDS-3UTR CAA 90 bp | TTGAGTAGGCTGGCCAGTACCATGCAGATCACTCAGACCTCACAGCTGACCTGGTCATGGCGCAGGTTGTaGCAGCTGCAGCTGTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LSRLASTMQITQTSQLTWSWRRL*QLQLLQ Trigger: CTGCAACAGCTGCAGCTGCAACAACCTGCGCCATGA...CCAGGTCAGCTGTGAGGTCTGAGTGATCTGCATGGTACTGGCCAGCCTACTCAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
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| CDS-3UTR CAA 90 bp | ACCTTGAGTAGGCTGGCCAGTACCATGCAGATCACTCAGACCTCACAGCTGACCTCTGCTCAGCCAAGCTaGGGGAACAGTGCTCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: TLSRLASTMQITQTSQLTSAQPS*GNSAPA Trigger: AGCAGGAGCACTGTTCCCCAAGCTTGGCTGAGCAGA...GGTCAGCTGTGAGGTCTGAGTGATCTGCATGGTACTGGCCAGCCTACTCAAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
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| CDS-3UTR CAA 90 bp | CACCAGCTTCCTCGGTGCAGATTCCCAGGGCTGAGGCTTGCCACAGGCATTCCCTCAATTTTCAGCCCCTaGGACTTGAACTCGATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: HQLPRCRFPGLRLATGIPSIFSP*DLNSMW Trigger: CCACATCGAGTTCAAGTCCAAGGGGCTGAAAATTGA...GGGAATGCCTGTGGCAAGCCTCAGCCCTGGGAATCTGCACCGAGGAAGCTGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
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| CDS GCA 90 bp | TGGAGAATCTGCGACAGGCACCTTCCAAACTCCTCCAGGATCATCTaGTCAGCCAAGCTTGGGGAACAGTGCTCCTGCTCTGCTTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: WRICDRHLPNSSRII*SAKLGEQCSCSASS Trigger: TGAGGAAGCAGAGCAGGAGCACTGTTCCCCAAGCTTGGCTGAGCAGATGATCCTGGAGGAGTTTGGAAGGTGCCTGTCGCAGATTCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
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| CDS-3UTR CAA 90 bp | CAGTACCATGCAGATCACTCAGACCTCACAGCTGACCTGGCCATGATGCGCGGCTCAATTTTCAGCCCCTaGGACTTGAACTCGATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: QYHADHSDLTADLAMMRGSIFSP*DLNSMW Trigger: CCACATCGAGTTCAAGTCCAAGGGGCTGAAAATTGA...GCCGCGCATCATGGCCAGGTCAGCTGTGAGGTCTGAGTGATCTGCATGGTACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
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| CDS-3UTR CAA 90 bp | CAAAACACAAAGTGTGGGCATAATAAGCCACCTCACCTTCTGGTGTCTGAGGTCTATTTTGGGTGGCCCTaGCAGAGCAGGTCCAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: QNTKCGHNKPPHLLVSEVYFGWP*QSRSRG Trigger: CCCTCTGGACCTGCTCTGCAAGGGCCACCCAAAATA...GACCTCAGACACCAGAAGGTGAGGTGGCTTATTATGCCCACACTTTGTGTTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000142193.8 |
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| CDS TCA 90 bp | GTTGGAAAGCTTCAGGATTTCTATCAAGACACGCCTTTATGGCTTTaGAGCGCTCGAGCTCATGGCGCAGGTTGTTGCAGCTGCAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VGKLQDFYQDTPLWL*SARAHGAGCCSCSC Trigger: ACAGCTGCAGCTGCAACAACCTGCGCCATGAGCTCGAGCGCTTCAAAGCCATAAAGGCGTGTCTTGATAGAAATCCTGAAGCTTTCCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
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| CDS GCA 90 bp | TACTCAATTTTCAGCCCCTTGGACTTGAACTCGATGTGGAGAATCTaGGACAGGCACCTTCCAAACTCCTCCAGGATCATCTGCTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: YSIFSPLDLNSMWRI*DRHLPNSSRIICSA Trigger: GGCTGAGCAGATGATCCTGGAGGAGTTTGGAAGGTGCCTGTCGCAGATTCTCCACATCGAGTTCAAGTCCAAGGGGCTGAAAATTGAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
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| CDS-3UTR CAA 90 bp | GGAGAAGAGGGTTGGACAGGAGACAAGTTTTCTCACTTCAAGCAGAAATACAGGGGAAAGGCAGCCCCATaGACAGCTGATGGGAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GEEGWTGDKFSHFKQKYRGKAAP*TADGRA Trigger: AGCTCTCCCATCAGCTGTCAATGGGGCTGCCTTTCC...CCTGTATTTCTGCTTGAAGTGAGAAAACTTGTCTCCTGTCCAACCCTCTTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000142193.8 |
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| CDS-3UTR CAA 90 bp | AATCCAGGTACACTATGCTCACAGAGGAAAGCAAGAACCCATCCTGTCTCATTCTATTTTGGGTGGCCCTaGCAGAGCAGGTCCAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: NPGTLCSQRKARTHPVSFYFGWP*QSRSRG Trigger: CCCTCTGGACCTGCTCTGCAAGGGCCACCCAAAATA...GAATGAGACAGGATGGGTTCTTGCTTTCCTCTGTGAGCATAGTGTACCTGGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
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| CDS-3UTR CAA 90 bp | GAGGGTTGGACAGGAGACAAGTTTTCTCACTTCAAGCAGAAATACAGGAAGAAATTGCAGCTGCAGCTGTaGCAGAAGTCCCCGCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: EGWTGDKFSHFKQKYRKKLQLQL*QKSPLE Trigger: CTCCAGCGGGGACTTCTGCAACAGCTGCAGCTGCAA...TTTCTTCCTGTATTTCTGCTTGAAGTGAGAAAACTTGTCTCCTGTCCAACCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000142193.8 |
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| CDS CCA 90 bp | GCTGTGTCGAAGTTTAGCAGCTCCCAGACGGCCTTTCCCCATTTTTaGTTGGAAAGCTTCAGGATTTCTATCAAGACACGCCTTTATGGC | + |
|
Preference number: 5 (lower is better) Translates to: AVSKFSSSQTAFPHF*LESFRISIKTRLYG Trigger: GCCATAAAGGCGTGTCTTGATAGAAATCCTGAAGCTTTCCAACCAAAAATGGGGAAAGGCCGTCTGGGAGCTGCTAAACTTCGACACAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
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| CDS-3UTR CAA 90 bp | GAGGGTTGGACAGGAGACAAGTTTTCTCACTTCAAGCAGAAATACAGGAAGAAATATTTTGGGTGGCCCTaGCAGAGCAGGTCCAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: EGWTGDKFSHFKQKYRKKYFGWP*QSRSRG Trigger: CCCTCTGGACCTGCTCTGCAAGGGCCACCCAAAATA...TTTCTTCCTGTATTTCTGCTTGAAGTGAGAAAACTTGTCTCCTGTCCAACCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000142193.8 |
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| CDS-3UTR CAA 90 bp | CAAAACACAAAGTGTGGGCATAATAAGCCACCTCACCTTCTGGTGTCTGAGGTCCTACCACCTGCTTCTTaGATTTCAACTGGGATCACG | + |
|
Preference number: 5 (lower is better) Translates to: QNTKCGHNKPPHLLVSEVLPPAS*ISTGIT Trigger: CGTGATCCCAGTTGAAATCAAAGAAGCAGGTGGTAG...GACCTCAGACACCAGAAGGTGAGGTGGCTTATTATGCCCACACTTTGTGTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025840.16 |
||
| CDS-3UTR CAA 90 bp | AGTTTAATCAGCTGCAGCATACACACGGCATTAAAGTGGACAGAGTGGACCTGGCTACCACCTGCTTCTTaGATTTCAACTGGGATCACG | + |
|
Preference number: 5 (lower is better) Translates to: SLISCSIHTALKWTEWTWLPPAS*ISTGIT Trigger: CGTGATCCCAGTTGAAATCAAAGAAGCAGGTGGTAG...CCAGGTCCACTCTGTCCACTTTAATGCCGTGTGTATGCTGCAGCTGATTAAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151341.8 |
||
| CDS-3UTR CAA 90 bp | AGGGTTGGACAGGAGACAAGTTTTCTCACTTCAAGCAGAAATACAGGAAGAAAATCATGGCGCAGGTTGTaGCAGCTGCAGCTGTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RVGQETSFLTSSRNTGRKSWRRL*QLQLLQ Trigger: CTGCAACAGCTGCAGCTGCAACAACCTGCGCCATGA...TTTTCTTCCTGTATTTCTGCTTGAAGTGAGAAAACTTGTCTCCTGTCCAACCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000142193.8 |
||
| CDS-3UTR CAA 90 bp | AATATATTTTCAGCTACTAACCAACTGGGAGTCTGGAAAGGTTTATTCTCACAAAGCTCATGGCGCAGGTaGTTGCAGCTGCAGCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: NIFSATNQLGVWKGLFSQSSWRR*LQLQLL Trigger: CAACAGCTGCAGCTGCAACAACCTGCGCCATGAGCT...TTGTGAGAATAAACCTTTCCAGACTCCCAGTTGGTTAGTAGCTGAAAATATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025840.16 |
||
| CDS CCA 72 bp | GGGCGCCTCCTTTCAGCTGACAAATCACCATGGGGCTaGAGTCTTTCTTCCGAGGGCAGCTGGAGGCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GRLLSADKSPWG*SLSSEGSWRPP Trigger: AGGAGGCCTCCAGCTGCCCTCGGAAGAAAGACTCCAGCCCCATGGTGATTTGTCAGCTGAAAGGAGGCGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000151341.8 |
||
| CDS CAA 72 bp | AGCAGATGGAGCGCTTTGAGCTCCCTCGCGCCACAGTaGTCTATGCAGAGCATCTGGGCGCCTCCTTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SRWSALSSLAPQ*SMQSIWAPPFS Trigger: GCTGAAAGGAGGCGCCCAGATGCTCTGCATAGACAACTGTGGCGCGAGGGAGCTCAAAGCGCTCCATCTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 ENSMUST00000151341.8 |
||
| CDS CAA 72 bp | ATGGCTTTGAAGCGCTCGAGCTCATGGCGCAGGTTGTaGCAGCTGCAGCTGTTGCAGAAGTCCCCGCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: MALKRSSSWRRL*QLQLLQKSPLE Trigger: CTCCAGCGGGGACTTCTGCAACAGCTGCAGCTGCAACAACCTGCGCCATGAGCTCGAGCGCTTCAAAGCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
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| CDS CAA 90 bp | AAGTCCCCGCTGGAGAAGCAGTCACAGTACCCAGACAGAGTTATTTaGGGTGGCCCTTGCAGAGCAGGTCCAGAGGGAAAGGCAGCCCCA | + |
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Preference number: 6 (lower is better) Translates to: KSPLEKQSQYPDRVI*GGPCRAGPEGKAAP Trigger: TGGGGCTGCCTTTCCCTCTGGACCTGCTCTGCAAGGGCCACCCAAAATAACTCTGTCTGGGTACTGTGACTGCTTCTCCAGCGGGGACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
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| CDS CAA 90 bp | TTGAAGCGCTCGAGCTCATGGCGCAGGTTGTTGCAGCTGCAGCTGTaGCAGAAGTCCCCGCTGGAGAAGCAGTCACAGTACCCAGACAGA | + |
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Preference number: 6 (lower is better) Translates to: LKRSSSWRRLLQLQL*QKSPLEKQSQYPDR Trigger: TCTGTCTGGGTACTGTGACTGCTTCTCCAGCGGGGACTTCTGCAACAGCTGCAGCTGCAACAACCTGCGCCATGAGCTCGAGCGCTTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
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| CDS TCA 72 bp | CAGGGCTGCCGCCTGGCACACTACCACCTGCTTCTTTaGTTTCAACTGGGATCACGCGCACTCCTGCGCTTA | + |
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Preference number: 6 (lower is better) Translates to: QGCRLAHYHLLL*FQLGSRALLRL Trigger: TAAGCGCAGGAGTGCGCGTGATCCCAGTTGAAATCAAAGAAGCAGGTGGTAGTGTGCCAGGCGGCAGCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000151341.8 |
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| CDS CCA 72 bp | AGGGGCCTGGAAAGCTGCGTCTTCAGGGCTGCCGCCTaGCACACTACCACCTGCTTCTTTGATTTCAACTGG | + |
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Preference number: 6 (lower is better) Translates to: RGLESCVFRAAA*HTTTCFFDFNW Trigger: CCAGTTGAAATCAAAGAAGCAGGTGGTAGTGTGCCAGGCGGCAGCCCTGAAGACGCAGCTTTCCAGGCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000151341.8 |
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| CDS CAA 72 bp | TCAGGGCTGCCGCCTGGCACACTACCACCTGCTTCTTaGATTTCAACTGGGATCACGCGCACTCCTGCGCTT | + |
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Preference number: 6 (lower is better) Translates to: SGLPPGTLPPAS*ISTGITRTPAL Trigger: AAGCGCAGGAGTGCGCGTGATCCCAGTTGAAATCAAAGAAGCAGGTGGTAGTGTGCCAGGCGGCAGCCCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000151341.8 |
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| CDS GCA 72 bp | TGCGACAGGCACCTTCCAAACTCCTCCAGGATCATCTaGTCAGCCAAGCTTGGGGAACAGTGCTCCTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: CDRHLPNSSRII*SAKLGEQCSCS Trigger: AGAGCAGGAGCACTGTTCCCCAAGCTTGGCTGAGCAGATGATCCTGGAGGAGTTTGGAAGGTGCCTGTCGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
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| CDS CAA 72 bp | TTTATGGCTTTGAAGCGCTCGAGCTCATGGCGCAGGTaGTTGCAGCTGCAGCTGTTGCAGAAGTCCCCGCTG | + |
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Preference number: 6 (lower is better) Translates to: FMALKRSSSWRR*LQLQLLQKSPL Trigger: CAGCGGGGACTTCTGCAACAGCTGCAGCTGCAACAACCTGCGCCATGAGCTCGAGCGCTTCAAAGCCATAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
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| CDS TCA 72 bp | TCTGGTCATCGTACTGAGGAAGCAGATGGAGCGCTTTaGGCTCCCTCGCGCCACAGTTGTCTATGCAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: SGHRTEEADGAL*APSRHSCLCRA Trigger: TGCTCTGCATAGACAACTGTGGCGCGAGGGAGCTCAAAGCGCTCCATCTGCTTCCTCAGTACGATGACCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 ENSMUST00000151341.8 |
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| CDS GCA 72 bp | TCACAGTACCCAGACAGAGTTATTTTGGGTGGCCCTTaGAGAGCAGGTCCAGAGGGAAAGGCAGCCCCATTG | + |
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Preference number: 6 (lower is better) Translates to: SQYPDRVILGGP*RAGPEGKAAPL Trigger: CAATGGGGCTGCCTTTCCCTCTGGACCTGCTCTGCAAGGGCCACCCAAAATAACTCTGTCTGGGTACTGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
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| CDS CCA 72 bp | GAAGCAGTCACAGTACCCAGACAGAGTTATTTTGGGTaGCCCTTGCAGAGCAGGTCCAGAGGGAAAGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: EAVTVPRQSYFG*PLQSRSRGKGS Trigger: GCTGCCTTTCCCTCTGGACCTGCTCTGCAAGGGCCACCCAAAATAACTCTGTCTGGGTACTGTGACTGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
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| CDS CAA 72 bp | GTCACAGTACCCAGACAGAGTTATTTTGGGTGGCCCTaGCAGAGCAGGTCCAGAGGGAAAGGCAGCCCCATT | + |
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Preference number: 6 (lower is better) Translates to: VTVPRQSYFGWP*QSRSRGKGSPI Trigger: AATGGGGCTGCCTTTCCCTCTGGACCTGCTCTGCAAGGGCCACCCAAAATAACTCTGTCTGGGTACTGTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
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| CDS CAA 72 bp | TTCTTCAGGCAGCCTGAGCGCTTACAGTTGCACCCTTaGCTGTGTCGAAGTTTAGCAGCTCCCAGACGGCCT | + |
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Preference number: 6 (lower is better) Translates to: FFRQPERLQLHP*LCRSLAAPRRP Trigger: AGGCCGTCTGGGAGCTGCTAAACTTCGACACAGCAAAGGGTGCAACTGTAAGCGCTCAGGCTGCCTGAAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
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| CDS TCA 72 bp | AGCAGGTCCAGAGGGAAAGGCAGCCCCATTGACAGCTaGTGGGAGAGCTCCATTATCAACCTGTGTGATGAG | + |
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Preference number: 6 (lower is better) Translates to: SRSRGKGSPIDS*WESSIINLCDE Trigger: CTCATCACACAGGTTGATAATGGAGCTCTCCCATCAGCTGTCAATGGGGCTGCCTTTCCCTCTGGACCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 ENSMUST00000151341.8 |
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| CDS TCA 72 bp | TTGTCTATGCAGAGCATCTGGGCGCCTCCTTTCAGCTaGCAAATCACCATGGGGCTGGAGTCTTTCTTCCGA | + |
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Preference number: 6 (lower is better) Translates to: LSMQSIWAPPFS*QITMGLESFFR Trigger: TCGGAAGAAAGACTCCAGCCCCATGGTGATTTGTCAGCTGAAAGGAGGCGCCCAGATGCTCTGCATAGACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025840.16 ENSMUST00000151341.8 |
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| CDS GCA 72 bp | TTCAGCCCCTTGGACTTGAACTCGATGTGGAGAATCTaGGACAGGCACCTTCCAAACTCCTCCAGGATCATC | + |
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Preference number: 6 (lower is better) Translates to: FSPLDLNSMWRI*DRHLPNSSRII Trigger: GATGATCCTGGAGGAGTTTGGAAGGTGCCTGTCGCAGATTCTCCACATCGAGTTCAAGTCCAAGGGGCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
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| CDS CAA 90 bp | GGTTGGAAAGCTTCAGGATTTCTATCAAGACACGCCTTTATGGCTTaGAAGCGCTCGAGCTCATGGCGCAGGTTGTTGCAGCTGCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: GWKASGFLSRHAFMA*KRSSSWRRLLQLQL Trigger: CAGCTGCAGCTGCAACAACCTGCGCCATGAGCTCGAGCGCTTCAAAGCCATAAAGGCGTGTCTTGATAGAAATCCTGAAGCTTTCCAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
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| CDS CCA 72 bp | TACTCAATTTTCAGCCCCTTGGACTTGAACTCGATGTaGAGAATCTGCGACAGGCACCTTCCAAACTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: YSIFSPLDLNSM*RICDRHLPNSS Trigger: GGAGGAGTTTGGAAGGTGCCTGTCGCAGATTCTCCACATCGAGTTCAAGTCCAAGGGGCTGAAAATTGAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
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| CDS CAA 90 bp | GTGTCGAAGTTTAGCAGCTCCCAGACGGCCTTTCCCCATTTTTGGTaGGAAAGCTTCAGGATTTCTATCAAGACACGCCTTTATGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: VSKFSSSQTAFPHFW*ESFRISIKTRLYGF Trigger: AAAGCCATAAAGGCGTGTCTTGATAGAAATCCTGAAGCTTTCCAACCAAAAATGGGGAAAGGCCGTCTGGGAGCTGCTAAACTTCGACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
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| CDS CAA 72 bp | TTTAGCAGCTCCCAGACGGCCTTTCCCCATTTTTGGTaGGAAAGCTTCAGGATTTCTATCAAGACACGCCTT | + |
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Preference number: 6 (lower is better) Translates to: FSSSQTAFPHFW*ESFRISIKTRL Trigger: AAGGCGTGTCTTGATAGAAATCCTGAAGCTTTCCAACCAAAAATGGGGAAAGGCCGTCTGGGAGCTGCTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025840.16 ENSMUST00000127142.2 ENSMUST00000142193.8 |
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