Pregenerated sensors for TESL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068113Ensembl transcript IDs: ENSMUST00000116614.3, ENSMUST00000163718.3
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | TTCAAATTGAAATTTATCATGAAATGCAGGCTGCTGTaGACAGCTATGGCTCCATACTGCTTGGTATACTCC | + |
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Preference number: 3 (lower is better) Translates to: FKLKFIMKCRLL*TAMAPYCLVYS Trigger: GGAGTATACCAAGCAGTATGGAGCCATAGCTGTCCACAGCAGCCTGCATTTCATGATAAATTTCAATTTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116614.3 |
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| CDS-3UTR GCA 90 bp | CATGAAATGCAGGCTGCTGTGGACAGCTATGGCTCCATACTGCTTGGTATACTCAGGGTCCTGGTCATGTaGAGGGAGCTGCTTCGCCAG | + |
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Preference number: 4 (lower is better) Translates to: HEMQAAVDSYGSILLGILRVLVM*RELLRQ Trigger: CTGGCGAAGCAGCTCCCTGCACATGACCAGGACCCT...GAGTATACCAAGCAGTATGGAGCCATAGCTGTCCACAGCAGCCTGCATTTCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116614.3 |
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| CDS-3UTR GCA 90 bp | CATGAAATGCAGGCTGCTGTGGACAGCTATGGCTCCATACTGCTTGGTATACTCAGCTGCTTCGCCAGCTaGTTCTTCCGGTACTGTGCC | + |
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Preference number: 4 (lower is better) Translates to: HEMQAAVDSYGSILLGILSCFAS*FFRYCA Trigger: GGCACAGTACCGGAAGAAGCAGCTGGCGAAGCAGCT...GAGTATACCAAGCAGTATGGAGCCATAGCTGTCCACAGCAGCCTGCATTTCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116614.3 |
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| CDS-3UTR GCA 90 bp | ATGAAATGCAGGCTGCTGTGGACAGCTATGGCTCCATACTGCTTGGTATACTCCTCATGTGCAGGGAGCTaGTTCGCCAGCTGCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: MKCRLLWTAMAPYCLVYSSCAGS*FASCFF Trigger: GAAGAAGCAGCTGGCGAAGCAGCTCCCTGCACATGA...GGAGTATACCAAGCAGTATGGAGCCATAGCTGTCCACAGCAGCCTGCATTTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116614.3 |
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| CDS-3UTR GCA 90 bp | CATGAAATGCAGGCTGCTGTGGACAGCTATGGCTCCATACTGCTTGGTATACTCGAACCTGTCACTGGCTaGTTCTCCTTAGGCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: HEMQAAVDSYGSILLGILEPVTG*FSLGSI Trigger: GATGCTGCCTAAGGAGAAGCAGCCAGTGACAGGTTC...GAGTATACCAAGCAGTATGGAGCCATAGCTGTCCACAGCAGCCTGCATTTCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116614.3 |
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| CDS-3UTR CCA 90 bp | CATGAAATGCAGGCTGCTGTGGACAGCTATGGCTCCATACTGCTTGGTATACTCGCTCTTCTGGGTCGATaGCATTGTGGCATCCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: HEMQAAVDSYGSILLGILALLGR*HCGILD Trigger: GTCAAGGATGCCACAATGCCATCGACCCAGAAGAGC...GAGTATACCAAGCAGTATGGAGCCATAGCTGTCCACAGCAGCCTGCATTTCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116614.3 |
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| CDS-3UTR GCA 90 bp | ATGAAATGCAGGCTGCTGTGGACAGCTATGGCTCCATACTGCTTGGTATACTCCTCCTTAGGCAGCATCTaGATGTACTGCCTAGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: MKCRLLWTAMAPYCLVYSSLGSI*MYCLAS Trigger: ACTGGCTAGGCAGTACATGCAGATGCTGCCTAAGGA...GGAGTATACCAAGCAGTATGGAGCCATAGCTGTCCACAGCAGCCTGCATTTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116614.3 |
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| CDS-3UTR CCA 90 bp | CATGAAATGCAGGCTGCTGTGGACAGCTATGGCTCCATACTGCTTGGTATACTCTACTCTCTGCTCTTCTaGGTCGATGGCATTGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HEMQAAVDSYGSILLGILYSLLF*VDGIVA Trigger: TGCCACAATGCCATCGACCCAGAAGAGCAGAGAGTA...GAGTATACCAAGCAGTATGGAGCCATAGCTGTCCACAGCAGCCTGCATTTCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116614.3 |
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| CDS-3UTR TCA 90 bp | ATGAAATGCAGGCTGCTGTGGACAGCTATGGCTCCATACTGCTTGGTATACTCCTGTTGGAATTGCCTCTaGTTTCAGCTTGGCGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: MKCRLLWTAMAPYCLVYSCWNCL*FQLGDQ Trigger: CTGATCGCCAAGCTGAAATCAGAGGCAATTCCAACA...GGAGTATACCAAGCAGTATGGAGCCATAGCTGTCCACAGCAGCCTGCATTTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116614.3 |
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| CDS-3UTR GCA 90 bp | ATGAAATGCAGGCTGCTGTGGACAGCTATGGCTCCATACTGCTTGGTATACTCCACGCCATGCTCTTCTTaGCCACATTTGCAGTTACGA | + |
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Preference number: 4 (lower is better) Translates to: MKCRLLWTAMAPYCLVYSTPCSS*PHLQLR Trigger: TCGTAACTGCAAATGTGGGCAAGAAGAGCATGGCGT...GGAGTATACCAAGCAGTATGGAGCCATAGCTGTCCACAGCAGCCTGCATTTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116614.3 |
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| CDS-3UTR CCA 90 bp | CATGAAATGCAGGCTGCTGTGGACAGCTATGGCTCCATACTGCTTGGTATACTCGTTTCTAATTCCAGCTaGGTTGTGCACCTTGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: HEMQAAVDSYGSILLGILVSNSS*VVHLVT Trigger: GGTGACAAGGTGCACAACCCAGCTGGAATTAGAAAC...GAGTATACCAAGCAGTATGGAGCCATAGCTGTCCACAGCAGCCTGCATTTCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116614.3 |
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| CDS-3UTR CCA 90 bp | CATGAAATGCAGGCTGCTGTGGACAGCTATGGCTCCATACTGCTTGGTATACTCGGTCTCCTTCTTTCATaGGGTGTTTGCAGCAGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: HEMQAAVDSYGSILLGILGLLLS*GVCSSN Trigger: GTTACTGCTGCAAACACCCCATGAAAGAAGGAGACC...GAGTATACCAAGCAGTATGGAGCCATAGCTGTCCACAGCAGCCTGCATTTCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116614.3 |
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| CDS-3UTR GCA 90 bp | CATGAAATGCAGGCTGCTGTGGACAGCTATGGCTCCATACTGCTTGGTATACTCTGTCACAGTAATGTCTaGCACAGTATAGCTTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: HEMQAAVDSYGSILLGILCHSNV*HSIASR Trigger: ACGGGAAGCTATACTGTGGCAGACATTACTGTGACA...GAGTATACCAAGCAGTATGGAGCCATAGCTGTCCACAGCAGCCTGCATTTCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116614.3 |
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| CDS-3UTR TCA 90 bp | ATGAAATGCAGGCTGCTGTGGACAGCTATGGCTCCATACTGCTTGGTATACTCCGGGTATATTCATTGCTaGATATTAGCTCGTCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: MKCRLLWTAMAPYCLVYSGYIHC*ILARHS Trigger: GCTGTGACGAGCTAATATTCAGCAATGAATATACCC...GGAGTATACCAAGCAGTATGGAGCCATAGCTGTCCACAGCAGCCTGCATTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116614.3 |
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| CDS-3UTR GCA 90 bp | CATGAAATGCAGGCTGCTGTGGACAGCTATGGCTCCATACTGCTTGGTATACTCGGCATCATTCTTCTTTaGAGGCACTGGATTTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: HEMQAAVDSYGSILLGILGIILL*RHWISQ Trigger: TTGAGAAATCCAGTGCCTGCAAAGAAGAATGATGCC...GAGTATACCAAGCAGTATGGAGCCATAGCTGTCCACAGCAGCCTGCATTTCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116614.3 |
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| CDS-3UTR GCA 90 bp | CATGAAATGCAGGCTGCTGTGGACAGCTATGGCTCCATACTGCTTGGTATACTCGAAGCATGCTGTGGATaGATGCCAGCTGAATATTTT | + |
|
Preference number: 4 (lower is better) Translates to: HEMQAAVDSYGSILLGILEACCG*MPAEYF Trigger: AAAATATTCAGCTGGCATGCATCCACAGCATGCTTC...GAGTATACCAAGCAGTATGGAGCCATAGCTGTCCACAGCAGCCTGCATTTCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116614.3 |
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| CDS-3UTR TCA 90 bp | ATGAAATGCAGGCTGCTGTGGACAGCTATGGCTCCATACTGCTTGGTATACTCCTGGATGCATGCCAGCTaGATATTTTGTAGATTACTC | + |
|
Preference number: 4 (lower is better) Translates to: MKCRLLWTAMAPYCLVYSWMHAS*IFCRLL Trigger: GAGTAATCTACAAAATATTCAGCTGGCATGCATCCA...GGAGTATACCAAGCAGTATGGAGCCATAGCTGTCCACAGCAGCCTGCATTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116614.3 |
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| CDS-3UTR GCA 90 bp | ATGAAATGCAGGCTGCTGTGGACAGCTATGGCTCCATACTGCTTGGTATACTCCCTTCTTGCCCACATTTaGAGTTACGACATGTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: MKCRLLWTAMAPYCLVYSLLAHI*SYDMFF Trigger: GAAAAACATGTCGTAACTGCAAATGTGGGCAAGAAG...GGAGTATACCAAGCAGTATGGAGCCATAGCTGTCCACAGCAGCCTGCATTTCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116614.3 |
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| CDS-3UTR GCA 90 bp | ATGAAATGCAGGCTGCTGTGGACAGCTATGGCTCCATACTGCTTGGTATACTCCTATTGTGGCAGTCAATaGAGCAGAAGTGTTTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: MKCRLLWTAMAPYCLVYSYCGSQ*SRSVSD Trigger: ATCTGAAACACTTCTGCTGCATTGACTGCCACAATA...GGAGTATACCAAGCAGTATGGAGCCATAGCTGTCCACAGCAGCCTGCATTTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116614.3 |
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| CDS-3UTR GCA 90 bp | CATGAAATGCAGGCTGCTGTGGACAGCTATGGCTCCATACTGCTTGGTATACTCCACATATATTTTTCCTaGCAGGATATTGTGGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: HEMQAAVDSYGSILLGILHIYFS*QDIVAV Trigger: GACTGCCACAATATCCTGGCAGGAAAAATATATGTG...GAGTATACCAAGCAGTATGGAGCCATAGCTGTCCACAGCAGCCTGCATTTCATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116614.3 |
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| CDS-3UTR CCA 90 bp | CATGAAATGCAGGCTGCTGTGGACAGCTATGGCTCCATACTGCTTGGTATACTCCTTCTTTGCAGGCACTaGATTTCTCAATACCATTAC | + |
|
Preference number: 4 (lower is better) Translates to: HEMQAAVDSYGSILLGILLLCRH*ISQYHY Trigger: GTAATGGTATTGAGAAATCCAGTGCCTGCAAAGAAG...GAGTATACCAAGCAGTATGGAGCCATAGCTGTCCACAGCAGCCTGCATTTCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116614.3 |
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| CDS-3UTR TCA 90 bp | CATGAAATGCAGGCTGCTGTGGACAGCTATGGCTCCATACTGCTTGGTATACTCACACAGGCTTGGATTTaGGCATCACATATATTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HEMQAAVDSYGSILLGILTQAWI*ASHIFF Trigger: GAAAAATATATGTGATGCTCAAATCCAAGCCTGTGT...GAGTATACCAAGCAGTATGGAGCCATAGCTGTCCACAGCAGCCTGCATTTCATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116614.3 |
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| CDS-3UTR CCA 90 bp | CATGAAATGCAGGCTGCTGTGGACAGCTATGGCTCCATACTGCTTGGTATACTCTCAATACCATTACATTaGGTTTGTGTGTTGGAATTG | + |
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Preference number: 4 (lower is better) Translates to: HEMQAAVDSYGSILLGILSIPLH*VCVLEL Trigger: CAATTCCAACACACAAACCCAATGTAATGGTATTGA...GAGTATACCAAGCAGTATGGAGCCATAGCTGTCCACAGCAGCCTGCATTTCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116614.3 |
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| CDS GCA 90 bp | CACTTAGAAGGGTCCTGGTCATGTGCAGGGAGCTGCTTCGCCAGCTaGTTCTTCCGGTACTGTGCCCCCTCTGAACCTGTCACTGGCTGC | + |
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Preference number: 5 (lower is better) Translates to: HLEGSWSCAGSCFAS*FFRYCAPSEPVTGC Trigger: GCAGCCAGTGACAGGTTCAGAGGGGGCACAGTACCGGAAGAAGCAGCTGGCGAAGCAGCTCCCTGCACATGACCAGGACCCTTCTAAGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000116614.3 ENSMUST00000163718.3 |
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| CDS-3UTR CAA 90 bp | CATGAAATGCAGGCTGCTGTGGACAGCTATGGCTCCATACTGCTTGGTATACTCTGCCTAGCCAGTGCCTaGTTCTGGACAGAGGGAATC | + |
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Preference number: 5 (lower is better) Translates to: HEMQAAVDSYGSILLGILCLASA*FWTEGI Trigger: GATTCCCTCTGTCCAGAACAAGGCACTGGCTAGGCA...GAGTATACCAAGCAGTATGGAGCCATAGCTGTCCACAGCAGCCTGCATTTCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116614.3 |
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| CDS CCA 90 bp | CTTGTCCTTGGAGCCCACTACTGCTGTGCTGTTTCTAATTCCAGCTaGGTTGTGCACCTTGTCACCTTGAGCATTCATATCAGAGGGACG | + |
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Preference number: 5 (lower is better) Translates to: LVLGAHYCCAVSNSS*VVHLVTLSIHIRGT Trigger: CGTCCCTCTGATATGAATGCTCAAGGTGACAAGGTGCACAACCCAGCTGGAATTAGAAACAGCACAGCAGTAGTGGGCTCCAAGGACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116614.3 ENSMUST00000163718.3 |
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| CDS GCA 90 bp | ACTTCGCGTCTTCAAAGAGTCTTCCAACTTTCCTGTCCCTCTCAGTaGTCAGGAGTACGCCATGCTCTTCTTGCCCACATTTGCAGTTAC | + |
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Preference number: 5 (lower is better) Translates to: TSRLQRVFQLSCPSQ*SGVRHALLAHICSY Trigger: GTAACTGCAAATGTGGGCAAGAAGAGCATGGCGTACTCCTGAGCACTGAGAGGGACAGGAAAGTTGGAAGACTCTTTGAAGACGCGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116614.3 ENSMUST00000163718.3 |
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| CDS CCA 90 bp | CGGGTGCCAGAGTTTACTGTAGCCAGCCCTTTCAGCATAGATAGCTaGGTCTCCTTCTTTCATGGGGTGTTTGCAGCAGTAACAGGTATA | + |
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Preference number: 5 (lower is better) Translates to: RVPEFTVASPFSIDS*VSFFHGVFAAVTGI Trigger: TATACCTGTTACTGCTGCAAACACCCCATGAAAGAAGGAGACCCAGCTATCTATGCTGAAAGGGCTGGCTACAGTAAACTCTGGCACCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116614.3 ENSMUST00000163718.3 |
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| CDS-3UTR CAA 90 bp | ATGAAATGCAGGCTGCTGTGGACAGCTATGGCTCCATACTGCTTGGTATACTCCTACGCCATGCTCTTCTaGCCCACATTTGCAGTTACG | + |
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Preference number: 5 (lower is better) Translates to: MKCRLLWTAMAPYCLVYSYAMLF*PTFAVT Trigger: CGTAACTGCAAATGTGGGCAAGAAGAGCATGGCGTA...GGAGTATACCAAGCAGTATGGAGCCATAGCTGTCCACAGCAGCCTGCATTTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116614.3 |
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| CDS-3UTR CAA 90 bp | CATGAAATGCAGGCTGCTGTGGACAGCTATGGCTCCATACTGCTTGGTATACTCCCCAGAGCCTCACTCTaGTATTTCTCCACAAACTGC | + |
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Preference number: 5 (lower is better) Translates to: HEMQAAVDSYGSILLGILPRASL*YFSTNC Trigger: GCAGTTTGTGGAGAAATACAAGAGTGAGGCTCTGGG...GAGTATACCAAGCAGTATGGAGCCATAGCTGTCCACAGCAGCCTGCATTTCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116614.3 |
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| CDS-3UTR CAA 90 bp | CATGAAATGCAGGCTGCTGTGGACAGCTATGGCTCCATACTGCTTGGTATACTCTTTCCTGCCAGGATATaGTGGCAGTCAATGCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: HEMQAAVDSYGSILLGILFPARI*WQSMQQ Trigger: CTGCTGCATTGACTGCCACAATATCCTGGCAGGAAA...GAGTATACCAAGCAGTATGGAGCCATAGCTGTCCACAGCAGCCTGCATTTCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116614.3 |
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| CDS GCA 90 bp | AGTCTTCCAACTTTCCTGTCCCTCTCAGTGCTCAGGAGTACGCCATaGTCTTCTTGCCCACATTTGCAGTTACGACATGTTTTTCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: SLPTFLSLSVLRSTP*SSCPHLQLRHVFLQ Trigger: CTGGAGAAAAACATGTCGTAACTGCAAATGTGGGCAAGAAGAGCATGGCGTACTCCTGAGCACTGAGAGGGACAGGAAAGTTGGAAGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000116614.3 ENSMUST00000163718.3 |
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| CDS GCA 90 bp | CGTCACAGCCAGAACAGCGGGGCTTCTCACTGTCACAGTAATGTCTaGCACAGTATAGCTTCCCGTTCTTCCAGAAGTAAATCATGTCTA | + |
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Preference number: 5 (lower is better) Translates to: RHSQNSGASHCHSNV*HSIASRSSRSKSCL Trigger: TAGACATGATTTACTTCTGGAAGAACGGGAAGCTATACTGTGGCAGACATTACTGTGACAGTGAGAAGCCCCGCTGTTCTGGCTGTGACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116614.3 ENSMUST00000163718.3 |
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| CDS TCA 90 bp | GCTGTGCTGTTTCTAATTCCAGCTGGGTTGTGCACCTTGTCACCTTaGGCATTCATATCAGAGGGACGTTTCACATTACCTACTCCCAGA | + |
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Preference number: 5 (lower is better) Translates to: AVLFLIPAGLCTLSP*AFISEGRFTLPTPR Trigger: TCTGGGAGTAGGTAATGTGAAACGTCCCTCTGATATGAATGCTCAAGGTGACAAGGTGCACAACCCAGCTGGAATTAGAAACAGCACAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116614.3 ENSMUST00000163718.3 |
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| CDS CCA 90 bp | GGATGCATGCCAGCTGAATATTTTGTAGATTACTCTCTGCTCTTCTaGGTCGATGGCATTGTGGCATCCTTGACACACCACAGCATGGTT | + |
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Preference number: 5 (lower is better) Translates to: GCMPAEYFVDYSLLF*VDGIVASLTHHSMV Trigger: AACCATGCTGTGGTGTGTCAAGGATGCCACAATGCCATCGACCCAGAAGAGCAGAGAGTAATCTACAAAATATTCAGCTGGCATGCATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116614.3 ENSMUST00000163718.3 |
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| CDS-3UTR CAA 90 bp | ATGAAATGCAGGCTGCTGTGGACAGCTATGGCTCCATACTGCTTGGTATACTCCGTTTGTGTGTTGGAATaGCCTCTGATTTCAGCTTGG | + |
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Preference number: 5 (lower is better) Translates to: MKCRLLWTAMAPYCLVYSVCVLE*PLISAW Trigger: CCAAGCTGAAATCAGAGGCAATTCCAACACACAAAC...GGAGTATACCAAGCAGTATGGAGCCATAGCTGTCCACAGCAGCCTGCATTTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116614.3 |
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| CDS-3UTR CAA 90 bp | CATGAAATGCAGGCTGCTGTGGACAGCTATGGCTCCATACTGCTTGGTATACTCTGGCATCATTCTTCTTaGCAGGCACTGGATTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: HEMQAAVDSYGSILLGILWHHSS*QALDFS Trigger: TGAGAAATCCAGTGCCTGCAAAGAAGAATGATGCCA...GAGTATACCAAGCAGTATGGAGCCATAGCTGTCCACAGCAGCCTGCATTTCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116614.3 |
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| CDS GCA 90 bp | CCCTCTCAGTGCTCAGGAGTACGCCATGCTCTTCTTGCCCACATTTaGAGTTACGACATGTTTTTCTCCAGAAATGTAGTTCAAACCCTT | + |
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Preference number: 5 (lower is better) Translates to: PSQCSGVRHALLAHI*SYDMFFSRNVVQTL Trigger: AAGGGTTTGAACTACATTTCTGGAGAAAAACATGTCGTAACTGCAAATGTGGGCAAGAAGAGCATGGCGTACTCCTGAGCACTGAGAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000116614.3 ENSMUST00000163718.3 |
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| CDS GCA 90 bp | ACTTTCCTGTCCCTCTCAGTGCTCAGGAGTACGCCATGCTCTTCTTaGCCACATTTGCAGTTACGACATGTTTTTCTCCAGAAATGTAGT | + |
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Preference number: 5 (lower is better) Translates to: TFLSLSVLRSTPCSS*PHLQLRHVFLQKCS Trigger: ACTACATTTCTGGAGAAAAACATGTCGTAACTGCAAATGTGGGCAAGAAGAGCATGGCGTACTCCTGAGCACTGAGAGGGACAGGAAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000116614.3 ENSMUST00000163718.3 |
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| CDS CCA 90 bp | TCCTTAGGCAGCATCTGCATGTACTGCCTAGCCAGTGCCTTGTTCTaGACAGAGGGAATCCAATCATATGTAACAGTGTTAATGGCATCA | + |
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Preference number: 5 (lower is better) Translates to: SLGSICMYCLASALF*TEGIQSYVTVLMAS Trigger: TGATGCCATTAACACTGTTACATATGATTGGATTCCCTCTGTCCAGAACAAGGCACTGGCTAGGCAGTACATGCAGATGCTGCCTAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116614.3 ENSMUST00000163718.3 |
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| CDS-3UTR CAA 90 bp | ATGAAATGCAGGCTGCTGTGGACAGCTATGGCTCCATACTGCTTGGTATACTCCCATTGGGTTTGTGTGTaGGAATTGCCTCTGATTTCA | + |
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Preference number: 5 (lower is better) Translates to: MKCRLLWTAMAPYCLVYSHWVCV*ELPLIS Trigger: TGAAATCAGAGGCAATTCCAACACACAAACCCAATG...GGAGTATACCAAGCAGTATGGAGCCATAGCTGTCCACAGCAGCCTGCATTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116614.3 |
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| CDS-3UTR CAA 90 bp | ATGAAATGCAGGCTGCTGTGGACAGCTATGGCTCCATACTGCTTGGTATACTCCGCTTGGGTATATTCATaGCTGAATATTAGCTCGTCA | + |
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Preference number: 5 (lower is better) Translates to: MKCRLLWTAMAPYCLVYSAWVYS*LNISSS Trigger: TGACGAGCTAATATTCAGCAATGAATATACCCAAGC...GGAGTATACCAAGCAGTATGGAGCCATAGCTGTCCACAGCAGCCTGCATTTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116614.3 |
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| CDS-3UTR CAA 90 bp | CATGAAATGCAGGCTGCTGTGGACAGCTATGGCTCCATACTGCTTGGTATACTCCACACAGGCTTGGATTaGAGCATCACATATATTTTT | + |
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Preference number: 5 (lower is better) Translates to: HEMQAAVDSYGSILLGILHTGLD*SITYIF Trigger: AAAAATATATGTGATGCTCAAATCCAAGCCTGTGTG...GAGTATACCAAGCAGTATGGAGCCATAGCTGTCCACAGCAGCCTGCATTTCATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116614.3 |
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| CDS GCA 90 bp | GGGAATCCAATCATATGTAACAGTGTTAATGGCATCATTCTTCTTTaGAGGCACTGGATTTCTCAATACCATTACATTGGGTTTGTGTGT | + |
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Preference number: 5 (lower is better) Translates to: GNPIICNSVNGIILL*RHWISQYHYIGFVC Trigger: ACACACAAACCCAATGTAATGGTATTGAGAAATCCAGTGCCTGCAAAGAAGAATGATGCCATTAACACTGTTACATATGATTGGATTCCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116614.3 ENSMUST00000163718.3 |
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| CDS CCA 90 bp | ATCATATGTAACAGTGTTAATGGCATCATTCTTCTTTGCAGGCACTaGATTTCTCAATACCATTACATTGGGTTTGTGTGTTGGAATTGC | + |
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Preference number: 5 (lower is better) Translates to: IICNSVNGIILLCRH*ISQYHYIGFVCWNC Trigger: GCAATTCCAACACACAAACCCAATGTAATGGTATTGAGAAATCCAGTGCCTGCAAAGAAGAATGATGCCATTAACACTGTTACATATGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116614.3 ENSMUST00000163718.3 |
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| CDS GCA 72 bp | GGGTCCTGGTCATGTGCAGGGAGCTGCTTCGCCAGCTaGTTCTTCCGGTACTGTGCCCCCTCTGAACCTGTC | + |
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Preference number: 6 (lower is better) Translates to: GSWSCAGSCFAS*FFRYCAPSEPV Trigger: GACAGGTTCAGAGGGGGCACAGTACCGGAAGAAGCAGCTGGCGAAGCAGCTCCCTGCACATGACCAGGACCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000116614.3 ENSMUST00000163718.3 |
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| CDS CAA 90 bp | AACACCATCCCTTCCACAGGTATGAACTTTTCTCCGATAAGACACTaGCTGCAGCAGGAGCATAGGAAGCATGCTGTGGATGCATGCCAG | + |
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Preference number: 6 (lower is better) Translates to: NTIPSTGMNFSPIRH*LQQEHRKHAVDACQ Trigger: CTGGCATGCATCCACAGCATGCTTCCTATGCTCCTGCTGCAGCAAGTGTCTTATCGGAGAAAAGTTCATACCTGTGGAAGGGATGGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116614.3 ENSMUST00000163718.3 |
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| CDS GCA 72 bp | TCCCTCTCAGTGCTCAGGAGTACGCCATGCTCTTCTTaGCCACATTTGCAGTTACGACATGTTTTTCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: SLSVLRSTPCSS*PHLQLRHVFLQ Trigger: CTGGAGAAAAACATGTCGTAACTGCAAATGTGGGCAAGAAGAGCATGGCGTACTCCTGAGCACTGAGAGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000116614.3 ENSMUST00000163718.3 |
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| CDS GCA 72 bp | ACTTTCCTGTCCCTCTCAGTGCTCAGGAGTACGCCATaGTCTTCTTGCCCACATTTGCAGTTACGACATGTT | + |
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Preference number: 6 (lower is better) Translates to: TFLSLSVLRSTP*SSCPHLQLRHV Trigger: AACATGTCGTAACTGCAAATGTGGGCAAGAAGAGCATGGCGTACTCCTGAGCACTGAGAGGGACAGGAAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116614.3 ENSMUST00000163718.3 |
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| CDS GCA 72 bp | CTTCAAAGAGTCTTCCAACTTTCCTGTCCCTCTCAGTaGTCAGGAGTACGCCATGCTCTTCTTGCCCACATT | + |
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Preference number: 6 (lower is better) Translates to: LQRVFQLSCPSQ*SGVRHALLAHI Trigger: AATGTGGGCAAGAAGAGCATGGCGTACTCCTGAGCACTGAGAGGGACAGGAAAGTTGGAAGACTCTTTGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116614.3 ENSMUST00000163718.3 |
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| CDS GCA 72 bp | CTCCTTAGGCAGCATCTGCATGTACTGCCTAGCCAGTaGCTTGTTCTGGACAGAGGGAATCCAATCATATGT | + |
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Preference number: 6 (lower is better) Translates to: LLRQHLHVLPSQ*LVLDRGNPIIC Trigger: ACATATGATTGGATTCCCTCTGTCCAGAACAAGGCACTGGCTAGGCAGTACATGCAGATGCTGCCTAAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116614.3 ENSMUST00000163718.3 |
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| CDS CCA 72 bp | GGAGCCCACTACTGCTGTGCTGTTTCTAATTCCAGCTaGGTTGTGCACCTTGTCACCTTGAGCATTCATATC | + |
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Preference number: 6 (lower is better) Translates to: GAHYCCAVSNSS*VVHLVTLSIHI Trigger: GATATGAATGCTCAAGGTGACAAGGTGCACAACCCAGCTGGAATTAGAAACAGCACAGCAGTAGTGGGCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116614.3 ENSMUST00000163718.3 |
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| CDS CAA 72 bp | GTCCCTCTCAGTGCTCAGGAGTACGCCATGCTCTTCTaGCCCACATTTGCAGTTACGACATGTTTTTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: VPLSAQEYAMLF*PTFAVTTCFSP Trigger: TGGAGAAAAACATGTCGTAACTGCAAATGTGGGCAAGAAGAGCATGGCGTACTCCTGAGCACTGAGAGGGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000116614.3 ENSMUST00000163718.3 |
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| CDS CCA 72 bp | GAGTTTACTGTAGCCAGCCCTTTCAGCATAGATAGCTaGGTCTCCTTCTTTCATGGGGTGTTTGCAGCAGTA | + |
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Preference number: 6 (lower is better) Translates to: EFTVASPFSIDS*VSFFHGVFAAV Trigger: TACTGCTGCAAACACCCCATGAAAGAAGGAGACCCAGCTATCTATGCTGAAAGGGCTGGCTACAGTAAACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116614.3 ENSMUST00000163718.3 |
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| CDS CAA 90 bp | TGCTGTGCTGTTTCTAATTCCAGCTGGGTTGTGCACCTTGTCACCTaGAGCATTCATATCAGAGGGACGTTTCACATTACCTACTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: CCAVSNSSWVVHLVT*SIHIRGTFHITYSQ Trigger: CTGGGAGTAGGTAATGTGAAACGTCCCTCTGATATGAATGCTCAAGGTGACAAGGTGCACAACCCAGCTGGAATTAGAAACAGCACAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116614.3 ENSMUST00000163718.3 |
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| CDS CAA 90 bp | TGGGTCTCCTTCTTTCATGGGGTGTTTGCAGCAGTAACAGGTATATaGGGTCTTCTTAGACTCCTTAGACTTGTCCTTGGAGCCCACTAC | + |
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Preference number: 6 (lower is better) Translates to: WVSFFHGVFAAVTGI*GLLRLLRLVLGAHY Trigger: GTAGTGGGCTCCAAGGACAAGTCTAAGGAGTCTAAGAAGACCCAATATACCTGTTACTGCTGCAAACACCCCATGAAAGAAGGAGACCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116614.3 ENSMUST00000163718.3 |
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| CDS CAA 90 bp | GGTTTGTGTGTTGGAATTGCCTCTGATTTCAGCTTGGCGATCAGGTaGATGTACTTCGCGTCTTCAAAGAGTCTTCCAACTTTCCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: GLCVGIASDFSLAIR*MYFASSKSLPTFLS Trigger: GGACAGGAAAGTTGGAAGACTCTTTGAAGACGCGAAGTACATCAACCTGATCGCCAAGCTGAAATCAGAGGCAATTCCAACACACAAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116614.3 ENSMUST00000163718.3 |
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| CDS CAA 90 bp | TGCTTCTCCTTAGGCAGCATCTGCATGTACTGCCTAGCCAGTGCCTaGTTCTGGACAGAGGGAATCCAATCATATGTAACAGTGTTAATG | + |
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Preference number: 6 (lower is better) Translates to: CFSLGSICMYCLASA*FWTEGIQSYVTVLM Trigger: CATTAACACTGTTACATATGATTGGATTCCCTCTGTCCAGAACAAGGCACTGGCTAGGCAGTACATGCAGATGCTGCCTAAGGAGAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116614.3 ENSMUST00000163718.3 |
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| CDS CAA 72 bp | TTAGGCAGCATCTGCATGTACTGCCTAGCCAGTGCCTaGTTCTGGACAGAGGGAATCCAATCATATGTAACA | + |
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Preference number: 6 (lower is better) Translates to: LGSICMYCLASA*FWTEGIQSYVT Trigger: TGTTACATATGATTGGATTCCCTCTGTCCAGAACAAGGCACTGGCTAGGCAGTACATGCAGATGCTGCCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116614.3 ENSMUST00000163718.3 |
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| CDS CCA 72 bp | AGCATCTGCATGTACTGCCTAGCCAGTGCCTTGTTCTaGACAGAGGGAATCCAATCATATGTAACAGTGTTA | + |
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Preference number: 6 (lower is better) Translates to: SICMYCLASALF*TEGIQSYVTVL Trigger: TAACACTGTTACATATGATTGGATTCCCTCTGTCCAGAACAAGGCACTGGCTAGGCAGTACATGCAGATGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116614.3 ENSMUST00000163718.3 |
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| CDS CCA 72 bp | ATATTTTGTAGATTACTCTCTGCTCTTCTGGGTCGATaGCATTGTGGCATCCTTGACACACCACAGCATGGT | + |
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Preference number: 6 (lower is better) Translates to: IFCRLLSALLGR*HCGILDTPQHG Trigger: ACCATGCTGTGGTGTGTCAAGGATGCCACAATGCCATCGACCCAGAAGAGCAGAGAGTAATCTACAAAATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116614.3 ENSMUST00000163718.3 |
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| CDS CAA 72 bp | CTCCAGAAATGTAGTTCAAACCCTTCACAGTTCTCTTaGCATTTTCGACAGGGGGCTCCAATTCCTTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: LQKCSSNPSQFS*HFRQGAPIPCS Trigger: TGAGCAAGGAATTGGAGCCCCCTGTCGAAAATGCAAAGAGAACTGTGAAGGGTTTGAACTACATTTCTGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000116614.3 ENSMUST00000163718.3 |
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| CDS CAA 72 bp | GTTGGAATTGCCTCTGATTTCAGCTTGGCGATCAGGTaGATGTACTTCGCGTCTTCAAAGAGTCTTCCAACT | + |
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Preference number: 6 (lower is better) Translates to: VGIASDFSLAIR*MYFASSKSLPT Trigger: AGTTGGAAGACTCTTTGAAGACGCGAAGTACATCAACCTGATCGCCAAGCTGAAATCAGAGGCAATTCCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116614.3 ENSMUST00000163718.3 |
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| CDS CAA 72 bp | GCAGGCACTGGATTTCTCAATACCATTACATTGGGTTaGTGTGTTGGAATTGCCTCTGATTTCAGCTTGGCG | + |
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Preference number: 6 (lower is better) Translates to: AGTGFLNTITLG*CVGIASDFSLA Trigger: CGCCAAGCTGAAATCAGAGGCAATTCCAACACACAAACCCAATGTAATGGTATTGAGAAATCCAGTGCCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116614.3 ENSMUST00000163718.3 |
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| CDS TCA 72 bp | TACCATTACATTGGGTTTGTGTGTTGGAATTGCCTCTaGTTTCAGCTTGGCGATCAGGTTGATGTACTTCGC | + |
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Preference number: 6 (lower is better) Translates to: YHYIGFVCWNCL*FQLGDQVDVLR Trigger: GCGAAGTACATCAACCTGATCGCCAAGCTGAAATCAGAGGCAATTCCAACACACAAACCCAATGTAATGGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116614.3 ENSMUST00000163718.3 |
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| CDS CAA 90 bp | GCATCATTCTTCTTTGCAGGCACTGGATTTCTCAATACCATTACATaGGGTTTGTGTGTTGGAATTGCCTCTGATTTCAGCTTGGCGATC | + |
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Preference number: 6 (lower is better) Translates to: ASFFFAGTGFLNTIT*GLCVGIASDFSLAI Trigger: GATCGCCAAGCTGAAATCAGAGGCAATTCCAACACACAAACCCAATGTAATGGTATTGAGAAATCCAGTGCCTGCAAAGAAGAATGATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116614.3 ENSMUST00000163718.3 |
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| CDS CAA 72 bp | CTGGATTTCTCAATACCATTACATTGGGTTTGTGTGTaGGAATTGCCTCTGATTTCAGCTTGGCGATCAGGT | + |
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Preference number: 6 (lower is better) Translates to: LDFSIPLHWVCV*ELPLISAWRSG Trigger: ACCTGATCGCCAAGCTGAAATCAGAGGCAATTCCAACACACAAACCCAATGTAATGGTATTGAGAAATCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116614.3 ENSMUST00000163718.3 |
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| CDS CCA 72 bp | TCTTTGCAGGCACTGGATTTCTCAATACCATTACATTaGGTTTGTGTGTTGGAATTGCCTCTGATTTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: SLQALDFSIPLH*VCVLELPLISA Trigger: AGCTGAAATCAGAGGCAATTCCAACACACAAACCCAATGTAATGGTATTGAGAAATCCAGTGCCTGCAAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116614.3 ENSMUST00000163718.3 |
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| CDS CAA 72 bp | AGATGCCAATTTTTGTTTTCTGCTTGGGTATATTCATaGCTGAATATTAGCTCGTCACAGCCAGAACAGCGG | + |
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Preference number: 6 (lower is better) Translates to: RCQFLFSAWVYS*LNISSSQPEQR Trigger: CCGCTGTTCTGGCTGTGACGAGCTAATATTCAGCAATGAATATACCCAAGCAGAAAACAAAAATTGGCATCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000116614.3 ENSMUST00000163718.3 |
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| CDS GCA 72 bp | ATCATATGTAACAGTGTTAATGGCATCATTCTTCTTTaGAGGCACTGGATTTCTCAATACCATTACATTGGG | + |
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Preference number: 6 (lower is better) Translates to: IICNSVNGIILL*RHWISQYHYIG Trigger: CCCAATGTAATGGTATTGAGAAATCCAGTGCCTGCAAAGAAGAATGATGCCATTAACACTGTTACATATGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116614.3 ENSMUST00000163718.3 |
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