Pregenerated sensors for TESK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028458Ensembl transcript IDs: ENSMUST00000060864.13, ENSMUST00000138981.8
Found 146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTGAGGGCTCTGTCCGCTCCAGGGCTGCTGCCCGGGGAAGGCTATaGTGTGCCCGGTTCCAGGGCTCCCTAGCCCACCCTTGTGGGGAA | + |
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Preference number: 1 (lower is better) Translates to: GEGSVRSRAAARGRL*CARFQGSLAHPCGE Trigger: TTCCCCACAAGGGTGGGCTAGGGAGCCCTGGAACCGGGCACAGCATAGCCTTCCCCGGGCAGCAGCCCTGGAGCGGACAGAGCCCTCACC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
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| 3UTR CCA 90 bp | CAGGGCTGCTGCCCTCGCAGTCCATCCTCTCCTCAGTCGGGCCCATaGGGGAAGGGCCAGGACCTGGCAGTGCAGTCTCCATCCGTCGGG | + |
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Preference number: 1 (lower is better) Translates to: QGCCPRSPSSPQSGP*GKGQDLAVQSPSVG Trigger: CCCGACGGATGGAGACTGCACTGCCAGGTCCTGGCCCTTCCCCCATGGGCCCGACTGAGGAGAGGATGGACTGCGAGGGCAGCAGCCCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
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| 3UTR GCA 90 bp | GGGCTCTGTCCGCTCCAGGGCTGCTGCCCGGGGAAGGCTATGCTGTaGCCGGTTCCAGGGCTCCCTAGCCCACCCTTGTGGGGAATTCAC | + |
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Preference number: 1 (lower is better) Translates to: GLCPLQGCCPGKAML*PVPGLPSPPLWGIH Trigger: GTGAATTCCCCACAAGGGTGGGCTAGGGAGCCCTGGAACCGGGCACAGCATAGCCTTCCCCGGGCAGCAGCCCTGGAGCGGACAGAGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
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| 3UTR CCA 90 bp | GGCCTCACTGCTAAGAGCGTGCCCCAGGCAGCTGCAGGCTGGGTGTaGGTGGCTTGGCATGATGCCCTCGGTGGCAGAGAAGACTGCCCG | + |
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Preference number: 1 (lower is better) Translates to: GLTAKSVPQAAAGWV*VAWHDALGGREDCP Trigger: CGGGCAGTCTTCTCTGCCACCGAGGGCATCATGCCAAGCCACCCACACCCAGCCTGCAGCTGCCTGGGGCACGCTCTTAGCAGTGAGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
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| 3UTR CCA 90 bp | GCAGGAAGAGGTCTGACCGGCTTCGGGAGAGCCGGGGGTCTGGCCTaGGAAGTGTGGCAGAGGGACCTCCTCTTGGAACAGACCCCTGAT | + |
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Preference number: 1 (lower is better) Translates to: AGRGLTGFGRAGGLA*EVWQRDLLLEQTPD Trigger: ATCAGGGGTCTGTTCCAAGAGGAGGTCCCTCTGCCACACTTCCCAGGCCAGACCCCCGGCTCTCCCGAAGCCGGTCAGACCTCTTCCTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
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| 3UTR CCA 90 bp | GAGCCGGGGGTCTGGCCTGGGAAGTGTGGCAGAGGGACCTCCTCTTaGAACAGACCCCTGATTGTATGTCAAGGGAGCCTTGGTGAGGGG | + |
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Preference number: 1 (lower is better) Translates to: EPGVWPGKCGRGTSS*NRPLIVCQGSLGEG Trigger: CCCCTCACCAAGGCTCCCTTGACATACAATCAGGGGTCTGTTCCAAGAGGAGGTCCCTCTGCCACACTTCCCAGGCCAGACCCCCGGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
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| 3UTR CCA 90 bp | GGTCTGACCGGCTTCGGGAGAGCCGGGGGTCTGGCCTGGGAAGTGTaGCAGAGGGACCTCCTCTTGGAACAGACCCCTGATTGTATGTCA | + |
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Preference number: 1 (lower is better) Translates to: GLTGFGRAGGLAWEV*QRDLLLEQTPDCMS Trigger: TGACATACAATCAGGGGTCTGTTCCAAGAGGAGGTCCCTCTGCCACACTTCCCAGGCCAGACCCCCGGCTCTCCCGAAGCCGGTCAGACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
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| 3UTR CCA 90 bp | GGGGATGAAGGTAGTGAGCGACAGCGGCGGACAGGGGTCTCAGGCTaGACCAGGATGTCTGGAGTGGTCACTAAGGGCAGCTGGGTAGAG | + |
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Preference number: 1 (lower is better) Translates to: GDEGSERQRRTGVSG*TRMSGVVTKGSWVE Trigger: CTCTACCCAGCTGCCCTTAGTGACCACTCCAGACATCCTGGTCCAGCCTGAGACCCCTGTCCGCCGCTGTCGCTCACTACCTTCATCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
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| 3UTR TCA 90 bp | GGCCTGGGAAGTGTGGCAGAGGGACCTCCTCTTGGAACAGACCCCTaGTTGTATGTCAAGGGAGCCTTGGTGAGGGGTGGCTTGGCGAGG | + |
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Preference number: 1 (lower is better) Translates to: GLGSVAEGPPLGTDP*LYVKGALVRGGLAR Trigger: CCTCGCCAAGCCACCCCTCACCAAGGCTCCCTTGACATACAATCAGGGGTCTGTTCCAAGAGGAGGTCCCTCTGCCACACTTCCCAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
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| 3UTR GCA 90 bp | GGAGCCTTGGTGAGGGGTGGCTTGGCGAGGGGCGTGGCCTCAGGCTaGTGCTCCAGGATCTGTTCCAGGTGCTGGGTGATTTCAGTAAAA | + |
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Preference number: 1 (lower is better) Translates to: GALVRGGLARGVASG*CSRICSRCWVISVK Trigger: TTTTACTGAAATCACCCAGCACCTGGAACAGATCCTGGAGCAGCAGCCTGAGGCCACGCCCCTCGCCAAGCCACCCCTCACCAAGGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
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| 3UTR CCA 90 bp | AAGGCTATGCTGTGCCCGGTTCCAGGGCTCCCTAGCCCACCCTTGTaGGGAATTCACCACCACAGCAGGGGGATTATTGTTGAGGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: KAMLCPVPGLPSPPL*GIHHHSRGIIVEGR Trigger: CCTCCCCTCAACAATAATCCCCCTGCTGTGGTGGTGAATTCCCCACAAGGGTGGGCTAGGGAGCCCTGGAACCGGGCACAGCATAGCCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
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| 3UTR CCA 90 bp | GTCTCAGGCTGGACCAGGATGTCTGGAGTGGTCACTAAGGGCAGCTaGGTAGAGGTAAGTGGTGATGGTGGAACCAGGGGCAGTGGAGTG | + |
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Preference number: 1 (lower is better) Translates to: VSGWTRMSGVVTKGS*VEVSGDGGTRGSGV Trigger: CACTCCACTGCCCCTGGTTCCACCATCACCACTTACCTCTACCCAGCTGCCCTTAGTGACCACTCCAGACATCCTGGTCCAGCCTGAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
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| 3UTR CCA 90 bp | TCCAGCAAGTGCACTGTCCTTACAGGGTATCCCGAAGGCCAAGGTTaGAAGCCTGAGCTCACAGGCCTCACTGCTAAGAGCGTGCCCCAG | + |
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Preference number: 1 (lower is better) Translates to: SSKCTVLTGYPEGQG*KPELTGLTAKSVPQ Trigger: CTGGGGCACGCTCTTAGCAGTGAGGCCTGTGAGCTCAGGCTTCCAACCTTGGCCTTCGGGATACCCTGTAAGGACAGTGCACTTGCTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
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| 3UTR CCA 90 bp | ATGCTGAGGCTCCCCTATACGGGGAGAAGAGCTAGTCAGCCCATCTaGGGCTGGCATTGTCCAGCAAGTGCACTGTCCTTACAGGGTATC | + |
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Preference number: 1 (lower is better) Translates to: MLRLPYTGRRASQPI*GWHCPASALSLQGI Trigger: GATACCCTGTAAGGACAGTGCACTTGCTGGACAATGCCAGCCCCAGATGGGCTGACTAGCTCTTCTCCCCGTATAGGGGAGCCTCAGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060864.13 ENSMUST00000138981.8 |
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| 3UTR CCA 90 bp | ATTTCAGTAAAAGGGGCCCGGGTGCTGGGTTCCATGCTGCAGCAGTaGATGGCCAGAAGCAGGAAAGGTAGCGGACAGTCATTTCCCACC | + |
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Preference number: 1 (lower is better) Translates to: ISVKGARVLGSMLQQ*MARSRKGSGQSFPT Trigger: GGTGGGAAATGACTGTCCGCTACCTTTCCTGCTTCTGGCCATCCACTGCTGCAGCATGGAACCCAGCACCCGGGCCCCTTTTACTGAAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
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| 3UTR TCA 90 bp | ACTGGACTTCTCTTGGGAAGAGTAAAGAAGCCTCCAGAAAAGACTTaGCCTTCCTTAAGAACTTCCCAAACTAGAGATGGGTCAGGGGAG | + |
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Preference number: 1 (lower is better) Translates to: TGLLLGRVKKPPEKT*PSLRTSQTRDGSGE Trigger: CTCCCCTGACCCATCTCTAGTTTGGGAAGTTCTTAAGGAAGGTCAAGTCTTTTCTGGAGGCTTCTTTACTCTTCCCAAGAGAAGTCCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
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| 3UTR CAA 90 bp | GGCAGTGGAGTGGCCGGCTTGCAGGGTGTGTCCAGCAGCTTGATCTaGCCACCCCTGAGGTCTTCCCGCAGTGAGAAGGGGTTGACTCGT | + |
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Preference number: 2 (lower is better) Translates to: GSGVAGLQGVSSSLI*PPLRSSRSEKGLTR Trigger: ACGAGTCAACCCCTTCTCACTGCGGGAAGACCTCAGGGGTGGCAAGATCAAGCTGCTGGACACACCCTGCAAGCCGGCCACTCCACTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
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| 3UTR-3UTR GCA 90 bp | GGCAGTGGAGTGGCCGGCTTGCAGGGTGTGTCCAGCAGCTTGATCTTGCCACCCGGCCAAAGTCCTCAGTaGGGGGTAGGTAGTCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: GSGVAGLQGVSSSLILPPGQSPQ*GVGSQG Trigger: ACCCTGACTACCTACCCCGCACTGAGGACTTTGGCC...GGGTGGCAAGATCAAGCTGCTGGACACACCCTGCAAGCCGGCCACTCCACTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
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| 3UTR-3UTR CCA 90 bp | CGGCGGACAGGGGTCTCAGGCTGGACCAGGATGTCTGGAGTGGTCACTAAGGGCCAGCCCATCTGGGGCTaGCATTGTCCAGCAAGTGCA | + |
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Preference number: 2 (lower is better) Translates to: RRTGVSGWTRMSGVVTKGQPIWG*HCPASA Trigger: TGCACTTGCTGGACAATGCCAGCCCCAGATGGGCTG...GCCCTTAGTGACCACTCCAGACATCCTGGTCCAGCCTGAGACCCCTGTCCGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
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| 3UTR CAA 90 bp | GGGAAGGCTATGCTGTGCCCGGTTCCAGGGCTCCCTAGCCCACCCTaGTGGGGAATTCACCACCACAGCAGGGGGATTATTGTTGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: GKAMLCPVPGLPSPP*WGIHHHSRGIIVEG Trigger: CCCCTCAACAATAATCCCCCTGCTGTGGTGGTGAATTCCCCACAAGGGTGGGCTAGGGAGCCCTGGAACCGGGCACAGCATAGCCTTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
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| 3UTR-3UTR GCA 90 bp | CCCGAAGGCCAAGGTTGGAAGCCTGAGCTCACAGGCCTCACTGCTAAGAGCGTGGTGGCCTCAGGCTGCTaGTCCAGGATCTGTTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: PEGQGWKPELTGLTAKSVVASGC*SRICSR Trigger: CCTGGAACAGATCCTGGAGCAGCAGCCTGAGGCCAC...CACGCTCTTAGCAGTGAGGCCTGTGAGCTCAGGCTTCCAACCTTGGCCTTCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGAAGACTGCCCGCCTCACAGTTCAAGTTGCGGTAGCGGGCAACAGCTGGGGGCTAGTCAGCCCATCTaGGGCTGGCATTGTCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: REDCPPHSSSCGSGQQLGASQPI*GWHCPA Trigger: TGCTGGACAATGCCAGCCCCAGATGGGCTGACTAGC...CCCCAGCTGTTGCCCGCTACCGCAACTTGAACTGTGAGGCGGGCAGTCTTCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGAAGACTGCCCGCCTCACAGTTCAAGTTGCGGTAGCGGGCAACAGCTGGGGATAGAAAGCCAAAGCTaGACGGGCCAAGGCAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: REDCPPHSSSCGSGQQLGIESQS*TGQGSS Trigger: GCTGCTGCCTTGGCCCGTTCAGCTTTGGCTTTCTAT...CCCCAGCTGTTGCCCGCTACCGCAACTTGAACTGTGAGGCGGGCAGTCTTCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
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| 3UTR-3UTR GCA 90 bp | TCAGCCCATCTGGGGCTGGCATTGTCCAGCAAGTGCACTGTCCTTACAGGGTATGGGAAGGCTATGCTGTaGCCGGTTCCAGGGCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: SAHLGLALSSKCTVLTGYGKAML*PVPGLP Trigger: AGGGAGCCCTGGAACCGGGCACAGCATAGCCTTCCC...ATACCCTGTAAGGACAGTGCACTTGCTGGACAATGCCAGCCCCAGATGGGCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
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| 3UTR-3UTR CCA 90 bp | ATTGAGACCATGCTGAGGCTCCCCTATACGGGGAGAAGAGCTAGTCAGCCCATCCCCGAAGGCCAAGGTTaGAAGCCTGAGCTCACAGGC | + |
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Preference number: 2 (lower is better) Translates to: IETMLRLPYTGRRASQPIPEGQG*KPELTG Trigger: GCCTGTGAGCTCAGGCTTCCAACCTTGGCCTTCGGG...GATGGGCTGACTAGCTCTTCTCCCCGTATAGGGGAGCCTCAGCATGGTCTCAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060864.13 ENSMUST00000138981.8 |
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| 3UTR-3UTR CCA 90 bp | CCCGAAGGCCAAGGTTGGAAGCCTGAGCTCACAGGCCTCACTGCTAAGAGCGTGTCCATGCTGCAGCAGTaGATGGCCAGAAGCAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: PEGQGWKPELTGLTAKSVSMLQQ*MARSRK Trigger: TTTCCTGCTTCTGGCCATCCACTGCTGCAGCATGGA...CACGCTCTTAGCAGTGAGGCCTGTGAGCTCAGGCTTCCAACCTTGGCCTTCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
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| 3UTR-3UTR TCA 90 bp | TCAGCCCATCTGGGGCTGGCATTGTCCAGCAAGTGCACTGTCCTTACAGGGTATTTGAACAAGACCTTGTaGCCTACATCCTTAACCTAC | + |
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Preference number: 2 (lower is better) Translates to: SAHLGLALSSKCTVLTGYLNKTL*PTSLTY Trigger: GTAGGTTAAGGATGTAGGTCACAAGGTCTTGTTCAA...ATACCCTGTAAGGACAGTGCACTTGCTGGACAATGCCAGCCCCAGATGGGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
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| 3UTR GCA 72 bp | CCGCTCCAGGGCTGCTGCCCGGGGAAGGCTATGCTGTaGCCGGTTCCAGGGCTCCCTAGCCCACCCTTGTGG | + |
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Preference number: 3 (lower is better) Translates to: PLQGCCPGKAML*PVPGLPSPPLW Trigger: CCACAAGGGTGGGCTAGGGAGCCCTGGAACCGGGCACAGCATAGCCTTCCCCGGGCAGCAGCCCTGGAGCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
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| 3UTR CCA 72 bp | GGTAGTGAGCGACAGCGGCGGACAGGGGTCTCAGGCTaGACCAGGATGTCTGGAGTGGTCACTAAGGGCAGC | + |
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Preference number: 3 (lower is better) Translates to: GSERQRRTGVSG*TRMSGVVTKGS Trigger: GCTGCCCTTAGTGACCACTCCAGACATCCTGGTCCAGCCTGAGACCCCTGTCCGCCGCTGTCGCTCACTACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
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| 3UTR-3UTR CAA 90 bp | CGGCGGACAGGGGTCTCAGGCTGGACCAGGATGTCTGGAGTGGTCACTAAGGGCGGTGTGTCCAGCAGCTaGATCTTGCCACCCCTGAGG | + |
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Preference number: 3 (lower is better) Translates to: RRTGVSGWTRMSGVVTKGGVSSS*ILPPLR Trigger: CCTCAGGGGTGGCAAGATCAAGCTGCTGGACACACC...GCCCTTAGTGACCACTCCAGACATCCTGGTCCAGCCTGAGACCCCTGTCCGCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
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| 3UTR TCA 72 bp | GGGGTAGGTAGTCAGGGTCTGCAGGCACTCGGGCGATaGGCTCACAGAGGACGATCCCGAAGGCGAAGACAT | + |
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Preference number: 3 (lower is better) Translates to: GVGSQGLQALGR*AHRGRSRRRRH Trigger: ATGTCTTCGCCTTCGGGATCGTCCTCTGTGAGCTCATCGCCCGAGTGCCTGCAGACCCTGACTACCTACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
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| 3UTR GCA 72 bp | GTGGCCTCAGGCTGCTGCTCCAGGATCTGTTCCAGGTaGTGGGTGATTTCAGTAAAAGGGGCCCGGGTGCTG | + |
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Preference number: 3 (lower is better) Translates to: VASGCCSRICSR*WVISVKGARVL Trigger: CAGCACCCGGGCCCCTTTTACTGAAATCACCCAGCACCTGGAACAGATCCTGGAGCAGCAGCCTGAGGCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
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| 3UTR GCA 72 bp | GTGGCTTGGCATGATGCCCTCGGTGGCAGAGAAGACTaGCCGCCTCACAGTTCAAGTTGCGGTAGCGGGCAA | + |
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Preference number: 3 (lower is better) Translates to: VAWHDALGGRED*PPHSSSCGSGQ Trigger: TTGCCCGCTACCGCAACTTGAACTGTGAGGCGGGCAGTCTTCTCTGCCACCGAGGGCATCATGCCAAGCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
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| 3UTR CCA 72 bp | GCCTCAGGCTGCTGCTCCAGGATCTGTTCCAGGTGCTaGGTGATTTCAGTAAAAGGGGCCCGGGTGCTGGGT | + |
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Preference number: 3 (lower is better) Translates to: ASGCCSRICSRC*VISVKGARVLG Trigger: ACCCAGCACCCGGGCCCCTTTTACTGAAATCACCCAGCACCTGGAACAGATCCTGGAGCAGCAGCCTGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
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| 3UTR CCA 72 bp | CTGTGCCCGGTTCCAGGGCTCCCTAGCCCACCCTTGTaGGGAATTCACCACCACAGCAGGGGGATTATTGTT | + |
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Preference number: 3 (lower is better) Translates to: LCPVPGLPSPPL*GIHHHSRGIIV Trigger: AACAATAATCCCCCTGCTGTGGTGGTGAATTCCCCACAAGGGTGGGCTAGGGAGCCCTGGAACCGGGCACAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
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| 3UTR-3UTR CAA 90 bp | GGTGCTCTGTCCATTGAGACCATGCTGAGGCTCCCCTATACGGGGAGAAGAGCTCATCTGGGGCTGGCATaGTCCAGCAAGTGCACTGTC | + |
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Preference number: 3 (lower is better) Translates to: GALSIETMLRLPYTGRRAHLGLA*SSKCTV Trigger: GACAGTGCACTTGCTGGACAATGCCAGCCCCAGATG...AGCTCTTCTCCCCGTATAGGGGAGCCTCAGCATGGTCTCAATGGACAGAGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060864.13 ENSMUST00000138981.8 |
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| 3UTR TCA 72 bp | AGTGTGGCAGAGGGACCTCCTCTTGGAACAGACCCCTaGTTGTATGTCAAGGGAGCCTTGGTGAGGGGTGGC | + |
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Preference number: 3 (lower is better) Translates to: SVAEGPPLGTDP*LYVKGALVRGG Trigger: GCCACCCCTCACCAAGGCTCCCTTGACATACAATCAGGGGTCTGTTCCAAGAGGAGGTCCCTCTGCCACACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
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| 3UTR TCA 72 bp | GCACTCCCTCACTCTCGGGCATGCCCAGCTAAGGGATaGCCTGCTGCTTGCTTGAAAGCTGCTCCAGAAACT | + |
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Preference number: 3 (lower is better) Translates to: ALPHSRACPAKG*PAACLKAAPET Trigger: AGTTTCTGGAGCAGCTTTCAAGCAAGCAGCAGGTCATCCCTTAGCTGGGCATGCCCGAGAGTGAGGGAGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
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| 3UTR CCA 72 bp | CTCCCCTATACGGGGAGAAGAGCTAGTCAGCCCATCTaGGGCTGGCATTGTCCAGCAAGTGCACTGTCCTTA | + |
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Preference number: 3 (lower is better) Translates to: LPYTGRRASQPI*GWHCPASALSL Trigger: TAAGGACAGTGCACTTGCTGGACAATGCCAGCCCCAGATGGGCTGACTAGCTCTTCTCCCCGTATAGGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060864.13 ENSMUST00000138981.8 |
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| 3UTR CCA 72 bp | GTCTGGCCTGGGAAGTGTGGCAGAGGGACCTCCTCTTaGAACAGACCCCTGATTGTATGTCAAGGGAGCCTT | + |
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Preference number: 3 (lower is better) Translates to: VWPGKCGRGTSS*NRPLIVCQGSL Trigger: AAGGCTCCCTTGACATACAATCAGGGGTCTGTTCCAAGAGGAGGTCCCTCTGCCACACTTCCCAGGCCAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
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| 3UTR CCA 72 bp | TGCACTGTCCTTACAGGGTATCCCGAAGGCCAAGGTTaGAAGCCTGAGCTCACAGGCCTCACTGCTAAGAGC | + |
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Preference number: 3 (lower is better) Translates to: CTVLTGYPEGQG*KPELTGLTAKS Trigger: GCTCTTAGCAGTGAGGCCTGTGAGCTCAGGCTTCCAACCTTGGCCTTCGGGATACCCTGTAAGGACAGTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
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| 3UTR TCA 72 bp | AATGCTGTGTCTAGTTCGGTGATCCCAATGGGACAGTaGACCCAGGGGTCGGCTAGGAGGTGCTCTGTCCAT | + |
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Preference number: 3 (lower is better) Translates to: NAVSSSVIPMGQ*TQGSARRCSVH Trigger: ATGGACAGAGCACCTCCTAGCCGACCCCTGGGTTCACTGTCCCATTGGGATCACCGAACTAGACACAGCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060864.13 ENSMUST00000138981.8 |
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| 3UTR TCA 72 bp | GGGCATGCCCAGCTAAGGGATGACCTGCTGCTTGCTTaGAAGCTGCTCCAGAAACTGGACTTCTCTTGGGAA | + |
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Preference number: 3 (lower is better) Translates to: GHAQLRDDLLLA*KLLQKLDFSWE Trigger: TTCCCAAGAGAAGTCCAGTTTCTGGAGCAGCTTTCAAGCAAGCAGCAGGTCATCCCTTAGCTGGGCATGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
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| 3UTR-3UTR CAA 90 bp | TTAACCTACGGCCTGCCAATTTTTAAGACTGCTATTCCTCCAGCACTCCCTCACCATCTGGGGCTGGCATaGTCCAGCAAGTGCACTGTC | + |
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Preference number: 3 (lower is better) Translates to: LTYGLPIFKTAIPPALPHHLGLA*SSKCTV Trigger: GACAGTGCACTTGCTGGACAATGCCAGCCCCAGATG...GTGAGGGAGTGCTGGAGGAATAGCAGTCTTAAAAATTGGCAGGCCGTAGGTTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
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| 3UTR-3UTR CAA 90 bp | TTCCAGACACTTGAACAAGACCTTGTGACCTACATCCTTAACCTACGGCCTGCCGAAACTGGACTTCTCTaGGGAAGAGTAAAGAAGCCT | + |
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Preference number: 3 (lower is better) Translates to: FQTLEQDLVTYILNLRPAETGLL*GRVKKP Trigger: AGGCTTCTTTACTCTTCCCAAGAGAAGTCCAGTTTC...GGCAGGCCGTAGGTTAAGGATGTAGGTCACAAGGTCTTGTTCAAGTGTCTGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
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| 3UTR TCA 72 bp | CTCTTGGGAAGAGTAAAGAAGCCTCCAGAAAAGACTTaGCCTTCCTTAAGAACTTCCCAAACTAGAGATGGG | + |
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Preference number: 3 (lower is better) Translates to: LLGRVKKPPEKT*PSLRTSQTRDG Trigger: CCCATCTCTAGTTTGGGAAGTTCTTAAGGAAGGTCAAGTCTTTTCTGGAGGCTTCTTTACTCTTCCCAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
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| CDS-3UTR CCA 90 bp | GAGAGCCGGGGGTCTGGCCTGGGAAGTGTGGCAGAGGGACCTCCTCTTGGAACACCACACGCGCAAGGCTaGACACGGCGCTGCGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: ESRGSGLGSVAEGPPLGTPHAQG*TRRCGG Trigger: CCCTCCGCAGCGCCGTGTCCAGCCTTGCGCGTGTGG...TGTTCCAAGAGGAGGTCCCTCTGCCACACTTCCCAGGCCAGACCCCCGGCTCTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
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| CDS-3UTR GCA 90 bp | GCCCATCTGGGGCTGGCATTGTCCAGCAAGTGCACTGTCCTTACAGGGTATCCCGGCTGGACACGGCGCTaGGGAGGGCCCGGTAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AHLGLALSSKCTVLTGYPGWTRR*GGPGRR Trigger: CCTCCTACCGGGCCCTCCGCAGCGCCGTGTCCAGCC...GGGATACCCTGTAAGGACAGTGCACTTGCTGGACAATGCCAGCCCCAGATGGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060864.13 ENSMUST00000138981.8 |
||
| CDS-3UTR CCA 90 bp | CTGGGGCTGGCATTGTCCAGCAAGTGCACTGTCCTTACAGGGTATCCCGAAGGCCAGGCCTGGGGGCTCTaGCTCAGGGCTGCTGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGLALSSKCTVLTGYPEGQAWGL*LRAAAL Trigger: GAGGGCAGCAGCCCTGAGCCAGAGCCCCCAGGCCTG...GCCTTCGGGATACCCTGTAAGGACAGTGCACTTGCTGGACAATGCCAGCCCCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
||
| 3UTR CAA 72 bp | GTGGCCGGCTTGCAGGGTGTGTCCAGCAGCTTGATCTaGCCACCCCTGAGGTCTTCCCGCAGTGAGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VAGLQGVSSSLI*PPLRSSRSEKG Trigger: CCCCTTCTCACTGCGGGAAGACCTCAGGGGTGGCAAGATCAAGCTGCTGGACACACCCTGCAAGCCGGCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
||
| CDS-3UTR TCA 90 bp | CCCGAAGGCCAAGGTTGGAAGCCTGAGCTCACAGGCCTCACTGCTAAGAGCGTGGGGGTTCTGGGGAGCTaGGCAGCTGTTCCAGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PEGQGWKPELTGLTAKSVGVLGS*AAVPGC Trigger: GCACCCTGGAACAGCTGCTCAGCTCCCCAGAACCCC...CACGCTCTTAGCAGTGAGGCCTGTGAGCTCAGGCTTCCAACCTTGGCCTTCGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
||
| CDS-3UTR CCA 90 bp | GGTGCTCTGTCCATTGAGACCATGCTGAGGCTCCCCTATACGGGGAGAAGAGCTCTGGGGAGCCAGGCCTaGGGGCTCTGGCTCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GALSIETMLRLPYTGRRALGSQA*GLWLRA Trigger: AGCCCTGAGCCAGAGCCCCCAGGCCTGGCTCCCCAG...AGCTCTTCTCCCCGTATAGGGGAGCCTCAGCATGGTCTCAATGGACAGAGCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
||
| CDS-3UTR TCA 90 bp | GCCCATCTGGGGCTGGCATTGTCCAGCAAGTGCACTGTCCTTACAGGGTATCCCGGGGTTCTGGGGAGCTaGGCAGCTGTTCCAGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: AHLGLALSSKCTVLTGYPGVLGS*AAVPGC Trigger: GCACCCTGGAACAGCTGCTCAGCTCCCCAGAACCCC...GGGATACCCTGTAAGGACAGTGCACTTGCTGGACAATGCCAGCCCCAGATGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060864.13 ENSMUST00000138981.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGTGGAGTGGCCGGCTTGCAGGGTGTGTCCAGCAGCTTGATCTTGCCACCCCTGAGGATGTTAGGGTaGCGGAGCCGGTTCATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSGVAGLQGVSSSLILPPLRMLG*RSRFIS Trigger: GCTGATGAACCGGCTCCGGCACCCTAACATCCTCAG...GGGTGGCAAGATCAAGCTGCTGGACACACCCTGCAAGCCGGCCACTCCACTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
||
| CDS-3UTR GCA 90 bp | CTGGGGCTGGCATTGTCCAGCAAGTGCACTGTCCTTACAGGGTATCCCGAAGGCGCTCTGGCTCAGGGCTaGTGCCCTCGCAGTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LGLALSSKCTVLTGYPEGALAQG*CPRSPS Trigger: GGATGGACTGCGAGGGCAGCAGCCCTGAGCCAGAGC...GCCTTCGGGATACCCTGTAAGGACAGTGCACTTGCTGGACAATGCCAGCCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
||
| CDS-3UTR GCA 90 bp | GGTGCTCTGTCCATTGAGACCATGCTGAGGCTCCCCTATACGGGGAGAAGAGCTGCCCGGGGAAGGCTATaGTGTGCCCGGTTCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GALSIETMLRLPYTGRRAARGRL*CARFQG Trigger: GCCCTGGAACCGGGCACAGCATAGCCTTCCCCGGGC...AGCTCTTCTCCCCGTATAGGGGAGCCTCAGCATGGTCTCAATGGACAGAGCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
||
| CDS-3UTR CCA 90 bp | CTGGGGCTGGCATTGTCCAGCAAGTGCACTGTCCTTACAGGGTATCCCGAAGGCGTAGCGGGCAACAGCTaGGGTAGGGCGGGGGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: LGLALSSKCTVLTGYPEGVAGNS*GRAGAH Trigger: ATGTGCCCCCGCCCTACCCCAGCTGTTGCCCGCTAC...GCCTTCGGGATACCCTGTAAGGACAGTGCACTTGCTGGACAATGCCAGCCCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
||
| CDS-3UTR TCA 90 bp | CTGGGGCTGGCATTGTCCAGCAAGTGCACTGTCCTTACAGGGTATCCCGAAGGCCAGGCACTCGGGCGATaGGCTCACAGAGGACGATCC | + |
|
Preference number: 4 (lower is better) Translates to: LGLALSSKCTVLTGYPEGQALGR*AHRGRS Trigger: GGATCGTCCTCTGTGAGCTCATCGCCCGAGTGCCTG...GCCTTCGGGATACCCTGTAAGGACAGTGCACTTGCTGGACAATGCCAGCCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
||
| CDS-3UTR GCA 90 bp | GTCTGCAGGCACTCGGGCGATGAGCTCACAGAGGACGATCCCGAAGGCGAAGACCCTCCCTTAGCGTGTTaGTCCGGTTACTGGGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VCRHSGDELTEDDPEGEDPPLAC*SGYWGA Trigger: AGCTCCCCAGTAACCGGAGCAACACGCTAAGGGAGG...GTCTTCGCCTTCGGGATCGTCCTCTGTGAGCTCATCGCCCGAGTGCCTGCAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
||
| CDS-3UTR GCA 90 bp | GGTGGCAGAGAAGACTGCCCGCCTCACAGTTCAAGTTGCGGTAGCGGGCAACAGGTAAGCGCGTGCAGCTaGCCTTGGTGCACACAGACC | + |
|
Preference number: 4 (lower is better) Translates to: GGREDCPPHSSSCGSGQQVSACS*PWCTQT Trigger: GGTCTGTGTGCACCAAGGGCAGCTGCACGCGCTTAC...CTGTTGCCCGCTACCGCAACTTGAACTGTGAGGCGGGCAGTCTTCTCTGCCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
||
| CDS-3UTR CCA 90 bp | CTGGGGCTGGCATTGTCCAGCAAGTGCACTGTCCTTACAGGGTATCCCGAAGGCGCGTGCAGCTGCCCTTaGTGCACACAGACCCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LGLALSSKCTVLTGYPEGACSCP*CTQTPM Trigger: CATGGGGGTCTGTGTGCACCAAGGGCAGCTGCACGC...GCCTTCGGGATACCCTGTAAGGACAGTGCACTTGCTGGACAATGCCAGCCCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060864.13 ENSMUST00000138981.8 |
||
| CDS-3UTR CCA 90 bp | GCCCATCTGGGGCTGGCATTGTCCAGCAAGTGCACTGTCCTTACAGGGTATCCCCAGGCAGCTGCAGGCTaGGTGTGGGTGGCTTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AHLGLALSSKCTVLTGYPQAAAG*VWVAWH Trigger: ATGCCAAGCCACCCACACCCAGCCTGCAGCTGCCTG...GGGATACCCTGTAAGGACAGTGCACTTGCTGGACAATGCCAGCCCCAGATGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
||
| 3UTR CAA 72 bp | CAGGGCTGCGAGGCTGAGGAACAAGTACTGATGAAGTaGTCAGTGGCCACAGCCAGAGGCAGCTGGGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QGCEAEEQVLMK*SVATARGSWGA Trigger: GGCTCCCCAGCTGCCTCTGGCTGTGGCCACTGACAACTTCATCAGTACTTGTTCCTCAGCCTCGCAGCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
||
| CDS-3UTR TCA 90 bp | TGCCCGGTTCCAGGGCTCCCTAGCCCACCCTTGTGGGGAATTCACCACCACAGCTCATCTTCAGCACCATaGCTTGTCCCGACTGTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: CPVPGLPSPPLWGIHHHSSSSAP*LVPTVG Trigger: ACCGACAGTCGGGACAAGTCATGGTGCTGAAGATGA...GCTGTGGTGGTGAATTCCCCACAAGGGTGGGCTAGGGAGCCCTGGAACCGGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
||
| CDS-3UTR GCA 90 bp | TCAGCCCATCTGGGGCTGGCATTGTCCAGCAAGTGCACTGTCCTTACAGGGTATGCCAGGACCTGGCAGTaGAGTCTCCATCCGTCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SAHLGLALSSKCTVLTGYARTWQ*SLHPSG Trigger: CCCCGACGGATGGAGACTGCACTGCCAGGTCCTGGC...ATACCCTGTAAGGACAGTGCACTTGCTGGACAATGCCAGCCCCAGATGGGCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
||
| CDS-3UTR GCA 90 bp | CTAGGAGGTGCTCTGTCCATTGAGACCATGCTGAGGCTCCCCTATACGGGGAGACTGGCTCAGGGCTGCTaGCCTCGCAGTCCATCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LGGALSIETMLRLPYTGRLAQGC*PRSPSS Trigger: AGAGGATGGACTGCGAGGGCAGCAGCCCTGAGCCAG...TCTCCCCGTATAGGGGAGCCTCAGCATGGTCTCAATGGACAGAGCACCTCCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
||
| CDS-3UTR GCA 90 bp | TTTTTAAGACTGCTATTCCTCCAGCACTCCCTCACTCTCGGGCATGCCCAGCTACGTGCCCCAGGCAGCTaGAGGCTGGGTGTGGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FLRLLFLQHSLTLGHAQLRAPGS*RLGVGG Trigger: GCCACCCACACCCAGCCTGCAGCTGCCTGGGGCACG...TAGCTGGGCATGCCCGAGAGTGAGGGAGTGCTGGAGGAATAGCAGTCTTAAAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
||
| CDS-3UTR CCA 90 bp | GCCCATCTGGGGCTGGCATTGTCCAGCAAGTGCACTGTCCTTACAGGGTATCCCCCAGGAGAGGGGTTCTaGGGAGCTGAGCAGCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: AHLGLALSSKCTVLTGYPPGEGF*GAEQLF Trigger: GAACAGCTGCTCAGCTCCCCAGAACCCCTCTCCTGG...GGGATACCCTGTAAGGACAGTGCACTTGCTGGACAATGCCAGCCCCAGATGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060864.13 ENSMUST00000138981.8 |
||
| CDS-3UTR CCA 90 bp | CTGGGGCTGGCATTGTCCAGCAAGTGCACTGTCCTTACAGGGTATCCCGAAGGCTCCCCGCAACACCTCTaGAGCCATCCAGTACGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LGLALSSKCTVLTGYPEGSPQHL*SHPVRG Trigger: TCCCCGTACTGGATGGCTCCAGAGGTGTTGCGGGGA...GCCTTCGGGATACCCTGTAAGGACAGTGCACTTGCTGGACAATGCCAGCCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060864.13 ENSMUST00000138981.8 |
||
| 3UTR CAA 72 bp | ATGCTGTGCCCGGTTCCAGGGCTCCCTAGCCCACCCTaGTGGGGAATTCACCACCACAGCAGGGGGATTATT | + |
|
Preference number: 4 (lower is better) Translates to: MLCPVPGLPSPP*WGIHHHSRGII Trigger: AATAATCCCCCTGCTGTGGTGGTGAATTCCCCACAAGGGTGGGCTAGGGAGCCCTGGAACCGGGCACAGCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
||
| CDS-3UTR TCA 90 bp | TGGCATTGTCCAGCAAGTGCACTGTCCTTACAGGGTATCCCGAAGGCCAAGGTTTCAAGGGAGCCTTGGTaGGGGGTGGCTTGGCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: WHCPASALSLQGIPKAKVSREPW*GVAWRG Trigger: CCCTCGCCAAGCCACCCCTCACCAAGGCTCCCTTGA...AACCTTGGCCTTCGGGATACCCTGTAAGGACAGTGCACTTGCTGGACAATGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
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| CDS-3UTR TCA 90 bp | TCAGCCCATCTGGGGCTGGCATTGTCCAGCAAGTGCACTGTCCTTACAGGGTATGTGGGTGGCTTGGCATaGTGCCCTCGGTGGCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SAHLGLALSSKCTVLTGYVGGLA*CPRWQR Trigger: TCTCTGCCACCGAGGGCATCATGCCAAGCCACCCAC...ATACCCTGTAAGGACAGTGCACTTGCTGGACAATGCCAGCCCCAGATGGGCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
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| CDS-3UTR GCA 90 bp | GCCCATCTGGGGCTGGCATTGTCCAGCAAGTGCACTGTCCTTACAGGGTATCCCCTGAGGATGTTAGGGTaGCGGAGCCGGTTCATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AHLGLALSSKCTVLTGYPLRMLG*RSRFIS Trigger: GCTGATGAACCGGCTCCGGCACCCTAACATCCTCAG...GGGATACCCTGTAAGGACAGTGCACTTGCTGGACAATGCCAGCCCCAGATGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060864.13 ENSMUST00000138981.8 |
||
| CDS-3UTR GCA 90 bp | CTGGGGCTGGCATTGTCCAGCAAGTGCACTGTCCTTACAGGGTATCCCGAAGGCTGCAGCTGCCCTTGGTaGACACAGACCCCCATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LGLALSSKCTVLTGYPEGCSCPW*TQTPMN Trigger: GTTCATGGGGGTCTGTGTGCACCAAGGGCAGCTGCA...GCCTTCGGGATACCCTGTAAGGACAGTGCACTTGCTGGACAATGCCAGCCCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060864.13 ENSMUST00000138981.8 |
||
| CDS-3UTR GCA 90 bp | AAGTGCACTGTCCTTACAGGGTATCCCGAAGGCCAAGGTTGGAAGCCTGAGCTCGGGAAGGCTATGCTGTaGCCGGTTCCAGGGCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KCTVLTGYPEGQGWKPELGKAML*PVPGLP Trigger: AGGGAGCCCTGGAACCGGGCACAGCATAGCCTTCCC...GAGCTCAGGCTTCCAACCTTGGCCTTCGGGATACCCTGTAAGGACAGTGCACTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
||
| CDS-3UTR CCA 90 bp | TTTTTAAGACTGCTATTCCTCCAGCACTCCCTCACTCTCGGGCATGCCCAGCTACCTCAGTCGGGCCCATaGGGGAAGGGCCAGGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLRLLFLQHSLTLGHAQLPQSGP*GKGQDL Trigger: CAGGTCCTGGCCCTTCCCCCATGGGCCCGACTGAGG...TAGCTGGGCATGCCCGAGAGTGAGGGAGTGCTGGAGGAATAGCAGTCTTAAAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
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| CDS-3UTR CCA 90 bp | ATTGAGACCATGCTGAGGCTCCCCTATACGGGGAGAAGAGCTAGTCAGCCCATCCAGGCTGGGTGTGGGTaGCTTGGCATGATGCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: IETMLRLPYTGRRASQPIQAGCG*LGMMPS Trigger: CGAGGGCATCATGCCAAGCCACCCACACCCAGCCTG...GATGGGCTGACTAGCTCTTCTCCCCGTATAGGGGAGCCTCAGCATGGTCTCAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
||
| CDS-3UTR CCA 90 bp | TCAGCCCATCTGGGGCTGGCATTGTCCAGCAAGTGCACTGTCCTTACAGGGTATGCTGCAGGCTGGGTGTaGGTGGCTTGGCATGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: SAHLGLALSSKCTVLTGYAAGWV*VAWHDA Trigger: GGCATCATGCCAAGCCACCCACACCCAGCCTGCAGC...ATACCCTGTAAGGACAGTGCACTTGCTGGACAATGCCAGCCCCAGATGGGCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
||
| CDS-3UTR GCA 90 bp | GGTGCTCTGTCCATTGAGACCATGCTGAGGCTCCCCTATACGGGGAGAAGAGCTGGCCAAAGTCCTCAGTaGGGGGTAGGTAGTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GALSIETMLRLPYTGRRAGQSPQ*GVGSQG Trigger: ACCCTGACTACCTACCCCGCACTGAGGACTTTGGCC...AGCTCTTCTCCCCGTATAGGGGAGCCTCAGCATGGTCTCAATGGACAGAGCACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
||
| CDS-3UTR GCA 90 bp | CTGGGGCTGGCATTGTCCAGCAAGTGCACTGTCCTTACAGGGTATCCCGAAGGCTGCTGGGTTCCATGCTaGAGCAGTGGATGGCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LGLALSSKCTVLTGYPEGCWVPC*SSGWPE Trigger: TTCTGGCCATCCACTGCTGCAGCATGGAACCCAGCA...GCCTTCGGGATACCCTGTAAGGACAGTGCACTTGCTGGACAATGCCAGCCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
||
| CDS-3UTR GCA 90 bp | AAGTGCACTGTCCTTACAGGGTATCCCGAAGGCCAAGGTTGGAAGCCTGAGCTCGTGGCCTCAGGCTGCTaGTCCAGGATCTGTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KCTVLTGYPEGQGWKPELVASGC*SRICSR Trigger: CCTGGAACAGATCCTGGAGCAGCAGCCTGAGGCCAC...GAGCTCAGGCTTCCAACCTTGGCCTTCGGGATACCCTGTAAGGACAGTGCACTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
||
| CDS-3UTR CCA 90 bp | TTAACCTACGGCCTGCCAATTTTTAAGACTGCTATTCCTCCAGCACTCCCTCACCCACACGCGCAAGGCTaGACACGGCGCTGCGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LTYGLPIFKTAIPPALPHPHAQG*TRRCGG Trigger: CCCTCCGCAGCGCCGTGTCCAGCCTTGCGCGTGTGG...GTGAGGGAGTGCTGGAGGAATAGCAGTCTTAAAAATTGGCAGGCCGTAGGTTAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
||
| CDS-3UTR CCA 90 bp | TCAGCCCATCTGGGGCTGGCATTGTCCAGCAAGTGCACTGTCCTTACAGGGTATTCCCCGCAACACCTCTaGAGCCATCCAGTACGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SAHLGLALSSKCTVLTGYSPQHL*SHPVRG Trigger: TCCCCGTACTGGATGGCTCCAGAGGTGTTGCGGGGA...ATACCCTGTAAGGACAGTGCACTTGCTGGACAATGCCAGCCCCAGATGGGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060864.13 ENSMUST00000138981.8 |
||
| CDS-3UTR CCA 90 bp | ATTGAGACCATGCTGAGGCTCCCCTATACGGGGAGAAGAGCTAGTCAGCCCATCCTGGCCTGGGAAGTGTaGCAGAGGGACCTCCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: IETMLRLPYTGRRASQPILAWEV*QRDLLL Trigger: CAAGAGGAGGTCCCTCTGCCACACTTCCCAGGCCAG...GATGGGCTGACTAGCTCTTCTCCCCGTATAGGGGAGCCTCAGCATGGTCTCAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
||
| 3UTR CAA 72 bp | GGTCTGGCCTGGGAAGTGTGGCAGAGGGACCTCCTCTaGGAACAGACCCCTGATTGTATGTCAAGGGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GLAWEVWQRDLL*EQTPDCMSREP Trigger: AGGCTCCCTTGACATACAATCAGGGGTCTGTTCCAAGAGGAGGTCCCTCTGCCACACTTCCCAGGCCAGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
||
| CDS-3UTR TCA 90 bp | GGAGGTGCTCTGTCCATTGAGACCATGCTGAGGCTCCCCTATACGGGGAGAAGAATAGAAAGCCAAAGCTaGACGGGCCAAGGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GGALSIETMLRLPYTGRRIESQS*TGQGSS Trigger: GCTGCTGCCTTGGCCCGTTCAGCTTTGGCTTTCTAT...TCTTCTCCCCGTATAGGGGAGCCTCAGCATGGTCTCAATGGACAGAGCACCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
||
| CDS-3UTR TCA 90 bp | GGAGGTGCTCTGTCCATTGAGACCATGCTGAGGCTCCCCTATACGGGGAGAAGACCCTTCCCTTGGATGTaGGGTCTCGGTGAAACACAC | + |
|
Preference number: 4 (lower is better) Translates to: GGALSIETMLRLPYTGRRPFPWM*GLGETH Trigger: GTGTGTTTCACCGAGACCTCACATCCAAGGGAAGGG...TCTTCTCCCCGTATAGGGGAGCCTCAGCATGGTCTCAATGGACAGAGCACCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
||
| CDS-3UTR GCA 90 bp | AAGTGCACTGTCCTTACAGGGTATCCCGAAGGCCAAGGTTGGAAGCCTGAGCTCGGCCCCGATCTTCTCTaGGCAGTCGAAATCGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KCTVLTGYPEGQGWKPELGPDLL*AVEIVH Trigger: GTGGACGATTTCGACTGCGCAGAGAAGATCGGGGCC...GAGCTCAGGCTTCCAACCTTGGCCTTCGGGATACCCTGTAAGGACAGTGCACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060864.13 ENSMUST00000138981.8 |
||
| CDS-3UTR GCA 90 bp | ATTGAGACCATGCTGAGGCTCCCCTATACGGGGAGAAGAGCTAGTCAGCCCATCCCTCCCTTAGCGTGTTaGTCCGGTTACTGGGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IETMLRLPYTGRRASQPIPPLAC*SGYWGA Trigger: AGCTCCCCAGTAACCGGAGCAACACGCTAAGGGAGG...GATGGGCTGACTAGCTCTTCTCCCCGTATAGGGGAGCCTCAGCATGGTCTCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060864.13 ENSMUST00000138981.8 |
||
| CDS-3UTR GCA 90 bp | CTAGGAGGTGCTCTGTCCATTGAGACCATGCTGAGGCTCCCCTATACGGGGAGAAGCCGGTTCATCAGCTaGACCTCCCTTAGCGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LGGALSIETMLRLPYTGRSRFIS*TSLSVL Trigger: CAACACGCTAAGGGAGGTGCAGCTGATGAACCGGCT...TCTCCCCGTATAGGGGAGCCTCAGCATGGTCTCAATGGACAGAGCACCTCCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060864.13 ENSMUST00000138981.8 |
||
| CDS-3UTR GCA 90 bp | ACTTTGCACGTGTTAGTCCTGTGTGTCAGCAATGCTGTGTCTAGTTCGGTGATCCCGCTCCAGGGCTGCTaGCCGGGGAAGGCTATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TLHVLVLCVSNAVSSSVIPLQGC*PGKAML Trigger: CAGCATAGCCTTCCCCGGGCAGCAGCCCTGGAGCGG...GATCACCGAACTAGACACAGCATTGCTGACACACAGGACTAACACGTGCAAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
||
| CDS-3UTR GCA 90 bp | TTCCAGACACTTGAACAAGACCTTGTGACCTACATCCTTAACCTACGGCCTGCCTGTCCGCTCCAGGGCTaGTGCCCGGGGAAGGCTATG | + |
|
Preference number: 4 (lower is better) Translates to: FQTLEQDLVTYILNLRPACPLQG*CPGKAM Trigger: CATAGCCTTCCCCGGGCAGCAGCCCTGGAGCGGACA...GGCAGGCCGTAGGTTAAGGATGTAGGTCACAAGGTCTTGTTCAAGTGTCTGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
||
| CDS-3UTR CCA 90 bp | GGGAAGTGTGGCAGAGGGACCTCCTCTTGGAACAGACCCCTGATTGTATGTCAACCAGGAGAGGGGTTCTaGGGAGCTGAGCAGCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GKCGRGTSSWNRPLIVCQPGEGF*GAEQLF Trigger: GAACAGCTGCTCAGCTCCCCAGAACCCCTCTCCTGG...TTGACATACAATCAGGGGTCTGTTCCAAGAGGAGGTCCCTCTGCCACACTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
||
| CDS-3UTR CCA 90 bp | TTAACCTACGGCCTGCCAATTTTTAAGACTGCTATTCCTCCAGCACTCCCTCACAGCCTTGGTGAGGGGTaGCTTGGCGAGGGGCGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LTYGLPIFKTAIPPALPHSLGEG*LGEGRG Trigger: GCCACGCCCCTCGCCAAGCCACCCCTCACCAAGGCT...GTGAGGGAGTGCTGGAGGAATAGCAGTCTTAAAAATTGGCAGGCCGTAGGTTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
||
| CDS-3UTR CCA 90 bp | ATTGAGACCATGCTGAGGCTCCCCTATACGGGGAGAAGAGCTAGTCAGCCCATCCCAGGATGTCTGGAGTaGTCACTAAGGGCAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: IETMLRLPYTGRRASQPIPGCLE*SLRAAG Trigger: CCCAGCTGCCCTTAGTGACCACTCCAGACATCCTGG...GATGGGCTGACTAGCTCTTCTCCCCGTATAGGGGAGCCTCAGCATGGTCTCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
||
| CDS-3UTR CCA 90 bp | TTTTTAAGACTGCTATTCCTCCAGCACTCCCTCACTCTCGGGCATGCCCAGCTATGGGTGTGGGTGGCTTaGCATGATGCCCTCGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FLRLLFLQHSLTLGHAQLWVWVA*HDALGG Trigger: GCCACCGAGGGCATCATGCCAAGCCACCCACACCCA...TAGCTGGGCATGCCCGAGAGTGAGGGAGTGCTGGAGGAATAGCAGTCTTAAAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
||
| CDS-3UTR TCA 90 bp | CTAGGAGGTGCTCTGTCCATTGAGACCATGCTGAGGCTCCCCTATACGGGGAGATCATCTTCAGCACCATaGCTTGTCCCGACTGTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: LGGALSIETMLRLPYTGRSSSAP*LVPTVG Trigger: ACCGACAGTCGGGACAAGTCATGGTGCTGAAGATGA...TCTCCCCGTATAGGGGAGCCTCAGCATGGTCTCAATGGACAGAGCACCTCCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060864.13 ENSMUST00000138981.8 |
||
| CDS-3UTR TCA 90 bp | ACTTTGCACGTGTTAGTCCTGTGTGTCAGCAATGCTGTGTCTAGTTCGGTGATCTGGCAGGAAGAGGTCTaGCCGGCTTCGGGAGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: TLHVLVLCVSNAVSSSVIWQEEV*PASGEP Trigger: CGGCTCTCCCGAAGCCGGTCAGACCTCTTCCTGCCA...GATCACCGAACTAGACACAGCATTGCTGACACACAGGACTAACACGTGCAAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
||
| CDS-3UTR TCA 90 bp | GGAGGTGCTCTGTCCATTGAGACCATGCTGAGGCTCCCCTATACGGGGAGAAGAGCAGTGAGAAGGGGTTaGCTCGTGTTAGATTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GGALSIETMLRLPYTGRRAVRRG*LVLDCP Trigger: GGGACAATCTAACACGAGTCAACCCCTTCTCACTGC...TCTTCTCCCCGTATAGGGGAGCCTCAGCATGGTCTCAATGGACAGAGCACCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
||
| CDS-3UTR GCA 90 bp | GGTGCTCTGTCCATTGAGACCATGCTGAGGCTCCCCTATACGGGGAGAAGAGCTGCAGCTGTTCCAGGGTaGCCCCATTCATATACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GALSIETMLRLPYTGRRAAAVPG*PHSYTL Trigger: CAGAGTATATGAATGGGGGCACCCTGGAACAGCTGC...AGCTCTTCTCCCCGTATAGGGGAGCCTCAGCATGGTCTCAATGGACAGAGCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060864.13 ENSMUST00000138981.8 |
||
| CDS-3UTR GCA 90 bp | AAGTGCACTGTCCTTACAGGGTATCCCGAAGGCCAAGGTTGGAAGCCTGAGCTCCTAGGAGACCAGGGCTaGGAGGCTGAGGAACAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: KCTVLTGYPEGQGWKPELLGDQG*EAEEQV Trigger: TACTTGTTCCTCAGCCTCGCAGCCCTGGTCTCCTAG...GAGCTCAGGCTTCCAACCTTGGCCTTCGGGATACCCTGTAAGGACAGTGCACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
||
| CDS-3UTR GCA 90 bp | ATTGAGACCATGCTGAGGCTCCCCTATACGGGGAGAAGAGCTAGTCAGCCCATCGGTGGCAGAGAAGACTaGCCGCCTCACAGTTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: IETMLRLPYTGRRASQPIGGRED*PPHSSS Trigger: ACTTGAACTGTGAGGCGGGCAGTCTTCTCTGCCACC...GATGGGCTGACTAGCTCTTCTCCCCGTATAGGGGAGCCTCAGCATGGTCTCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
||
| CDS-3UTR CCA 90 bp | GGAGGTGCTCTGTCCATTGAGACCATGCTGAGGCTCCCCTATACGGGGAGAAGATGCTGCAGCAGTGGATaGCCAGAAGCAGGAAAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GGALSIETMLRLPYTGRRCCSSG*PEAGKV Trigger: TACCTTTCCTGCTTCTGGCCATCCACTGCTGCAGCA...TCTTCTCCCCGTATAGGGGAGCCTCAGCATGGTCTCAATGGACAGAGCACCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
||
| CDS-3UTR GCA 90 bp | TTCCAGACACTTGAACAAGACCTTGTGACCTACATCCTTAACCTACGGCCTGCCGTAAGCGCGTGCAGCTaGCCTTGGTGCACACAGACC | + |
|
Preference number: 4 (lower is better) Translates to: FQTLEQDLVTYILNLRPAVSACS*PWCTQT Trigger: GGTCTGTGTGCACCAAGGGCAGCTGCACGCGCTTAC...GGCAGGCCGTAGGTTAAGGATGTAGGTCACAAGGTCTTGTTCAAGTGTCTGGAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
||
| CDS-3UTR GCA 90 bp | ATTGAGACCATGCTGAGGCTCCCCTATACGGGGAGAAGAGCTAGTCAGCCCATCGCAGCTGTTCCAGGGTaGCCCCATTCATATACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: IETMLRLPYTGRRASQPIAAVPG*PHSYTL Trigger: CAGAGTATATGAATGGGGGCACCCTGGAACAGCTGC...GATGGGCTGACTAGCTCTTCTCCCCGTATAGGGGAGCCTCAGCATGGTCTCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060864.13 ENSMUST00000138981.8 |
||
| CDS-3UTR GCA 90 bp | TTTTTAAGACTGCTATTCCTCCAGCACTCCCTCACTCTCGGGCATGCCCAGCTACCTCACAGTTCAAGTTaGGGTAGCGGGCAACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLRLLFLQHSLTLGHAQLPHSSS*GSGQQL Trigger: CAGCTGTTGCCCGCTACCGCAACTTGAACTGTGAGG...TAGCTGGGCATGCCCGAGAGTGAGGGAGTGCTGGAGGAATAGCAGTCTTAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
||
| CDS-3UTR CCA 90 bp | TTCCAGACACTTGAACAAGACCTTGTGACCTACATCCTTAACCTACGGCCTGCCCCTAGCCCACCCTTGTaGGGAATTCACCACCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: FQTLEQDLVTYILNLRPAPSPPL*GIHHHS Trigger: GCTGTGGTGGTGAATTCCCCACAAGGGTGGGCTAGG...GGCAGGCCGTAGGTTAAGGATGTAGGTCACAAGGTCTTGTTCAAGTGTCTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
||
| CDS-3UTR TCA 90 bp | TTAACCTACGGCCTGCCAATTTTTAAGACTGCTATTCCTCCAGCACTCCCTCACGAGGTCTTCCCGCAGTaGGAAGGGGTTGACTCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LTYGLPIFKTAIPPALPHEVFPQ*EGVDSC Trigger: ACACGAGTCAACCCCTTCTCACTGCGGGAAGACCTC...GTGAGGGAGTGCTGGAGGAATAGCAGTCTTAAAAATTGGCAGGCCGTAGGTTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
||
| CDS-3UTR CCA 90 bp | TCAGCCCATCTGGGGCTGGCATTGTCCAGCAAGTGCACTGTCCTTACAGGGTATTGTTGCTCCGGTTACTaGGGAGCTTGTTCATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SAHLGLALSSKCTVLTGYCCSGY*GACSSS Trigger: TGAAGATGAACAAGCTCCCCAGTAACCGGAGCAACA...ATACCCTGTAAGGACAGTGCACTTGCTGGACAATGCCAGCCCCAGATGGGCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060864.13 ENSMUST00000138981.8 |
||
| CDS-3UTR CCA 90 bp | ATTGAGACCATGCTGAGGCTCCCCTATACGGGGAGAAGAGCTAGTCAGCCCATCTGTTGCTCCGGTTACTaGGGAGCTTGTTCATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: IETMLRLPYTGRRASQPICCSGY*GACSSS Trigger: TGAAGATGAACAAGCTCCCCAGTAACCGGAGCAACA...GATGGGCTGACTAGCTCTTCTCCCCGTATAGGGGAGCCTCAGCATGGTCTCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060864.13 ENSMUST00000138981.8 |
||
| CDS-3UTR CCA 90 bp | TTCCAGACACTTGAACAAGACCTTGTGACCTACATCCTTAACCTACGGCCTGCCTCCATGCTGCAGCAGTaGATGGCCAGAAGCAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FQTLEQDLVTYILNLRPASMLQQ*MARSRK Trigger: TTTCCTGCTTCTGGCCATCCACTGCTGCAGCATGGA...GGCAGGCCGTAGGTTAAGGATGTAGGTCACAAGGTCTTGTTCAAGTGTCTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
||
| CDS-3UTR TCA 90 bp | ACTTTGCACGTGTTAGTCCTGTGTGTCAGCAATGCTGTGTCTAGTTCGGTGATCGATGTGAGGTCTCGGTaGAACACACCTTTGGCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TLHVLVLCVSNAVSSSVIDVRSR*NTPLAC Trigger: ACACGCCAAAGGTGTGTTTCACCGAGACCTCACATC...GATCACCGAACTAGACACAGCATTGCTGACACACAGGACTAACACGTGCAAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060864.13 ENSMUST00000138981.8 |
||
| CDS-3UTR CCA 90 bp | ACTTTGCACGTGTTAGTCCTGTGTGTCAGCAATGCTGTGTCTAGTTCGGTGATCATCTGTTCCAGGTGCTaGGTGATTTCAGTAAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TLHVLVLCVSNAVSSSVIICSRC*VISVKG Trigger: CCCTTTTACTGAAATCACCCAGCACCTGGAACAGAT...GATCACCGAACTAGACACAGCATTGCTGACACACAGGACTAACACGTGCAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
||
| CDS GCA 90 bp | CTGCGCAGTCGAAATCGTCCACACGCGCAAGGCTGGACACGGCGCTaGGGAGGGCCCGGTAGGAGGAGGGCCGGCCCCGGCCCGGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LRSRNRPHAQGWTRR*GGPGRRRAGPGPGL Trigger: GAGGCCCGGGCCGGGGCCGGCCCTCCTCCTACCGGGCCCTCCGCAGCGCCGTGTCCAGCCTTGCGCGTGTGGACGATTTCGACTGCGCAG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060864.13 ENSMUST00000138981.8 |
||
| CDS-3UTR CAA 90 bp | GGGAGCCTTGGTGAGGGGTGGCTTGGCGAGGGGCGTGGCCTCAGGCTGCTGCTCCGGTTACTGGGGAGCTaGTTCATCTTCAGCACCATG | + |
|
Preference number: 5 (lower is better) Translates to: GSLGEGWLGEGRGLRLLLRLLGS*FIFSTM Trigger: CATGGTGCTGAAGATGAACAAGCTCCCCAGTAACCG...GAGCAGCAGCCTGAGGCCACGCCCCTCGCCAAGCCACCCCTCACCAAGGCTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
||
| CDS-3UTR CAA 90 bp | TCTGACCGGCTTCGGGAGAGCCGGGGGTCTGGCCTGGGAAGTGTGGCAGAGGGACCAAGGGCTCCTTCCTaGTCCCTTCCCTTGGATGTG | + |
|
Preference number: 5 (lower is better) Translates to: SDRLRESRGSGLGSVAEGPRAPS*SLPLDV Trigger: CACATCCAAGGGAAGGGACAAGGAAGGAGCCCTTGG...TCCCTCTGCCACACTTCCCAGGCCAGACCCCCGGCTCTCCCGAAGCCGGTCAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGTGGAGTGGCCGGCTTGCAGGGTGTGTCCAGCAGCTTGATCTTGCCACCCCTTCAGCACCATGACTaGTCCCGACTGTCGGTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: GSGVAGLQGVSSSLILPPLQHHD*SRLSVP Trigger: CGGCACCGACAGTCGGGACAAGTCATGGTGCTGAAG...GGGTGGCAAGATCAAGCTGCTGGACACACCCTGCAAGCCGGCCACTCCACTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
||
| CDS-3UTR CAA 90 bp | AGAGAAGACTGCCCGCCTCACAGTTCAAGTTGCGGTAGCGGGCAACAGCTGGGGCGCGTGCAGCTGCCCTaGGTGCACACAGACCCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: REDCPPHSSSCGSGQQLGRVQLP*VHTDPH Trigger: ATGGGGGTCTGTGTGCACCAAGGGCAGCTGCACGCG...CCCCAGCTGTTGCCCGCTACCGCAACTTGAACTGTGAGGCGGGCAGTCTTCTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
||
| CDS-3UTR CAA 90 bp | GCCCATCTGGGGCTGGCATTGTCCAGCAAGTGCACTGTCCTTACAGGGTATCCCCGCGTGCAGCTGCCCTaGGTGCACACAGACCCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: AHLGLALSSKCTVLTGYPRVQLP*VHTDPH Trigger: ATGGGGGTCTGTGTGCACCAAGGGCAGCTGCACGCG...GGGATACCCTGTAAGGACAGTGCACTTGCTGGACAATGCCAGCCCCAGATGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060864.13 ENSMUST00000138981.8 |
||
| CDS GCA 90 bp | CCGAACCTTGTAGACCTCAGAGAAGAAACCGGCCCCGATCTTCTCTaGGCAGTCGAAATCGTCCACACGCGCAAGGCTGGACACGGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: PNLVDLREETGPDLL*AVEIVHTRKAGHGA Trigger: AGCGCCGTGTCCAGCCTTGCGCGTGTGGACGATTTCGACTGCGCAGAGAAGATCGGGGCCGGTTTCTTCTCTGAGGTCTACAAGGTTCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060864.13 ENSMUST00000138981.8 |
||
| CDS CCA 90 bp | GAAGACATCGGCCTTCTCATCATACAGCTCTCCCCGCAACACCTCTaGAGCCATCCAGTACGGGGAGCCCACCACAGCCAAGGGCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: EDIGLLIIQLSPQHL*SHPVRGAHHSQGLL Trigger: AAGGAGCCCTTGGCTGTGGTGGGCTCCCCGTACTGGATGGCTCCAGAGGTGTTGCGGGGAGAGCTGTATGATGAGAAGGCCGATGTCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
||
| CDS GCA 90 bp | CCCATGAACCTGAGGATGTTAGGGTGCCGGAGCCGGTTCATCAGCTaGACCTCCCTTAGCGTGTTGCTCCGGTTACTGGGGAGCTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: PMNLRMLGCRSRFIS*TSLSVLLRLLGSLF Trigger: GAACAAGCTCCCCAGTAACCGGAGCAACACGCTAAGGGAGGTGCAGCTGATGAACCGGCTCCGGCACCCTAACATCCTCAGGTTCATGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060864.13 ENSMUST00000138981.8 |
||
| CDS-3UTR CAA 90 bp | CTTACAGGGTATCCCGAAGGCCAAGGTTGGAAGCCTGAGCTCACAGGCCTCACTGGTGTGTCCAGCAGCTaGATCTTGCCACCCCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LTGYPEGQGWKPELTGLTGVSSS*ILPPLR Trigger: CCTCAGGGGTGGCAAGATCAAGCTGCTGGACACACC...AGTGAGGCCTGTGAGCTCAGGCTTCCAACCTTGGCCTTCGGGATACCCTGTAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
||
| CDS-3UTR CAA 90 bp | AAGTGCACTGTCCTTACAGGGTATCCCGAAGGCCAAGGTTGGAAGCCTGAGCTCCTCCCTAGCCCACCCTaGTGGGGAATTCACCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: KCTVLTGYPEGQGWKPELLPSPP*WGIHHH Trigger: GTGGTGGTGAATTCCCCACAAGGGTGGGCTAGGGAG...GAGCTCAGGCTTCCAACCTTGGCCTTCGGGATACCCTGTAAGGACAGTGCACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
||
| CDS TCA 90 bp | GCGTGTTGCTCCGGTTACTGGGGAGCTTGTTCATCTTCAGCACCATaGCTTGTCCCGACTGTCGGTGCCGAACCTTGTAGACCTCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: ACCSGYWGACSSSAP*LVPTVGAEPCRPQR Trigger: TCTCTGAGGTCTACAAGGTTCGGCACCGACAGTCGGGACAAGTCATGGTGCTGAAGATGAACAAGCTCCCCAGTAACCGGAGCAACACGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060864.13 ENSMUST00000138981.8 |
||
| CDS TCA 90 bp | CCAAGGGCTCCTTCCTTGTCCCTTCCCTTGGATGTGAGGTCTCGGTaGAACACACCTTTGGCGTGTAGGTACCGTAGGCCTTGTGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: PRAPSLSLPLDVRSR*NTPLACRYRRPCAM Trigger: CATTGCACAAGGCCTACGGTACCTACACGCCAAAGGTGTGTTTCACCGAGACCTCACATCCAAGGGAAGGGACAAGGAAGGAGCCCTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138981.8 |
||
| CDS-3UTR CAA 90 bp | ACTTTGCACGTGTTAGTCCTGTGTGTCAGCAATGCTGTGTCTAGTTCGGTGATCAGTGGAGTGGCCGGCTaGCAGGGTGTGTCCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TLHVLVLCVSNAVSSSVISGVAG*QGVSSS Trigger: GCTGCTGGACACACCCTGCAAGCCGGCCACTCCACT...GATCACCGAACTAGACACAGCATTGCTGACACACAGGACTAACACGTGCAAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
||
| CDS-3UTR CAA 90 bp | ATTGAGACCATGCTGAGGCTCCCCTATACGGGGAGAAGAGCTAGTCAGCCCATCCGGTTACTGGGGAGCTaGTTCATCTTCAGCACCATG | + |
|
Preference number: 5 (lower is better) Translates to: IETMLRLPYTGRRASQPIRLLGS*FIFSTM Trigger: CATGGTGCTGAAGATGAACAAGCTCCCCAGTAACCG...GATGGGCTGACTAGCTCTTCTCCCCGTATAGGGGAGCCTCAGCATGGTCTCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060864.13 ENSMUST00000138981.8 |
||
| CDS-3UTR CAA 90 bp | TTTTTAAGACTGCTATTCCTCCAGCACTCCCTCACTCTCGGGCATGCCCAGCTATCCAGCAGCTTGATCTaGCCACCCCTGAGGTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: FLRLLFLQHSLTLGHAQLSSSLI*PPLRSS Trigger: GGAAGACCTCAGGGGTGGCAAGATCAAGCTGCTGGA...TAGCTGGGCATGCCCGAGAGTGAGGGAGTGCTGGAGGAATAGCAGTCTTAAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
||
| CDS-3UTR CAA 90 bp | TTAACCTACGGCCTGCCAATTTTTAAGACTGCTATTCCTCCAGCACTCCCTCACCTTCAGCACCATGACTaGTCCCGACTGTCGGTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LTYGLPIFKTAIPPALPHLQHHD*SRLSVP Trigger: CGGCACCGACAGTCGGGACAAGTCATGGTGCTGAAG...GTGAGGGAGTGCTGGAGGAATAGCAGTCTTAAAAATTGGCAGGCCGTAGGTTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
||
| CDS-3UTR CAA 90 bp | ACTTTGCACGTGTTAGTCCTGTGTGTCAGCAATGCTGTGTCTAGTTCGGTGATCACCTCCCTTAGCGTGTaGCTCCGGTTACTGGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: TLHVLVLCVSNAVSSSVITSLSV*LRLLGS Trigger: GCTCCCCAGTAACCGGAGCAACACGCTAAGGGAGGT...GATCACCGAACTAGACACAGCATTGCTGACACACAGGACTAACACGTGCAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060864.13 ENSMUST00000138981.8 |
||
| CDS-3UTR CAA 90 bp | AAGTGCACTGTCCTTACAGGGTATCCCGAAGGCCAAGGTTGGAAGCCTGAGCTCCAAGTACTGATGAAGTaGTCAGTGGCCACAGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: KCTVLTGYPEGQGWKPELQVLMK*SVATAR Trigger: TCTGGCTGTGGCCACTGACAACTTCATCAGTACTTG...GAGCTCAGGCTTCCAACCTTGGCCTTCGGGATACCCTGTAAGGACAGTGCACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
||
| CDS-3UTR CAA 90 bp | ACTTTGCACGTGTTAGTCCTGTGTGTCAGCAATGCTGTGTCTAGTTCGGTGATCCGCAGTGAGAAGGGGTaGACTCGTGTTAGATTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TLHVLVLCVSNAVSSSVIRSEKG*TRVRLS Trigger: GGACAATCTAACACGAGTCAACCCCTTCTCACTGCG...GATCACCGAACTAGACACAGCATTGCTGACACACAGGACTAACACGTGCAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060864.13 |
||
| CDS GCA 72 bp | CGAAATCGTCCACACGCGCAAGGCTGGACACGGCGCTaGGGAGGGCCCGGTAGGAGGAGGGCCGGCCCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: RNRPHAQGWTRR*GGPGRRRAGPG Trigger: GCCGGGGCCGGCCCTCCTCCTACCGGGCCCTCCGCAGCGCCGTGTCCAGCCTTGCGCGTGTGGACGATTTCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060864.13 ENSMUST00000138981.8 |
||
| CDS GCA 72 bp | CTGAGGATGTTAGGGTGCCGGAGCCGGTTCATCAGCTaGACCTCCCTTAGCGTGTTGCTCCGGTTACTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LRMLGCRSRFIS*TSLSVLLRLLG Trigger: CCCCAGTAACCGGAGCAACACGCTAAGGGAGGTGCAGCTGATGAACCGGCTCCGGCACCCTAACATCCTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060864.13 ENSMUST00000138981.8 |
||
| CDS GCA 72 bp | TGCACACAGACCCCCATGAACCTGAGGATGTTAGGGTaGCGGAGCCGGTTCATCAGCTGCACCTCCCTTAGC | + |
|
Preference number: 6 (lower is better) Translates to: CTQTPMNLRMLG*RSRFISCTSLS Trigger: GCTAAGGGAGGTGCAGCTGATGAACCGGCTCCGGCACCCTAACATCCTCAGGTTCATGGGGGTCTGTGTGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060864.13 ENSMUST00000138981.8 |
||
| CDS GCA 72 bp | GTAGACCTCAGAGAAGAAACCGGCCCCGATCTTCTCTaGGCAGTCGAAATCGTCCACACGCGCAAGGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: VDLREETGPDLL*AVEIVHTRKAG Trigger: TCCAGCCTTGCGCGTGTGGACGATTTCGACTGCGCAGAGAAGATCGGGGCCGGTTTCTTCTCTGAGGTCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060864.13 ENSMUST00000138981.8 |
||
| CDS GCA 72 bp | TCCAGGGTGCCCCCATTCATATACTCTGTAAGCGCGTaGAGCTGCCCTTGGTGCACACAGACCCCCATGAAC | + |
|
Preference number: 6 (lower is better) Translates to: SRVPPFIYSVSA*SCPWCTQTPMN Trigger: GTTCATGGGGGTCTGTGTGCACCAAGGGCAGCTGCACGCGCTTACAGAGTATATGAATGGGGGCACCCTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000060864.13 ENSMUST00000138981.8 |
||
| CDS CAA 72 bp | CGGAGCCGGTTCATCAGCTGCACCTCCCTTAGCGTGTaGCTCCGGTTACTGGGGAGCTTGTTCATCTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: RSRFISCTSLSV*LRLLGSLFIFS Trigger: GCTGAAGATGAACAAGCTCCCCAGTAACCGGAGCAACACGCTAAGGGAGGTGCAGCTGATGAACCGGCTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060864.13 ENSMUST00000138981.8 |
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| CDS CAA 90 bp | ATCAGCTGCACCTCCCTTAGCGTGTTGCTCCGGTTACTGGGGAGCTaGTTCATCTTCAGCACCATGACTTGTCCCGACTGTCGGTGCCGA | + |
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Preference number: 6 (lower is better) Translates to: ISCTSLSVLLRLLGS*FIFSTMTCPDCRCR Trigger: TCGGCACCGACAGTCGGGACAAGTCATGGTGCTGAAGATGAACAAGCTCCCCAGTAACCGGAGCAACACGCTAAGGGAGGTGCAGCTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060864.13 ENSMUST00000138981.8 |
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| CDS CAA 90 bp | TTAGGGTGCCGGAGCCGGTTCATCAGCTGCACCTCCCTTAGCGTGTaGCTCCGGTTACTGGGGAGCTTGTTCATCTTCAGCACCATGACT | + |
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Preference number: 6 (lower is better) Translates to: LGCRSRFISCTSLSV*LRLLGSLFIFSTMT Trigger: AGTCATGGTGCTGAAGATGAACAAGCTCCCCAGTAACCGGAGCAACACGCTAAGGGAGGTGCAGCTGATGAACCGGCTCCGGCACCCTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060864.13 ENSMUST00000138981.8 |
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| CDS GCA 72 bp | GGAGCCGGTTCATCAGCTGCACCTCCCTTAGCGTGTTaGTCCGGTTACTGGGGAGCTTGTTCATCTTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: GAGSSAAPPLAC*SGYWGACSSSA Trigger: TGCTGAAGATGAACAAGCTCCCCAGTAACCGGAGCAACACGCTAAGGGAGGTGCAGCTGATGAACCGGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060864.13 ENSMUST00000138981.8 |
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| CDS TCA 72 bp | TCCGGTTACTGGGGAGCTTGTTCATCTTCAGCACCATaGCTTGTCCCGACTGTCGGTGCCGAACCTTGTAGA | + |
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Preference number: 6 (lower is better) Translates to: SGYWGACSSSAP*LVPTVGAEPCR Trigger: TCTACAAGGTTCGGCACCGACAGTCGGGACAAGTCATGGTGCTGAAGATGAACAAGCTCCCCAGTAACCGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060864.13 ENSMUST00000138981.8 |
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| CDS CAA 72 bp | GTTACTGGGGAGCTTGTTCATCTTCAGCACCATGACTaGTCCCGACTGTCGGTGCCGAACCTTGTAGACCTC | + |
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Preference number: 6 (lower is better) Translates to: VTGELVHLQHHD*SRLSVPNLVDL Trigger: GAGGTCTACAAGGTTCGGCACCGACAGTCGGGACAAGTCATGGTGCTGAAGATGAACAAGCTCCCCAGTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060864.13 ENSMUST00000138981.8 |
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| CDS CAA 72 bp | ACCTCCCTTAGCGTGTTGCTCCGGTTACTGGGGAGCTaGTTCATCTTCAGCACCATGACTTGTCCCGACTGT | + |
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Preference number: 6 (lower is better) Translates to: TSLSVLLRLLGS*FIFSTMTCPDC Trigger: ACAGTCGGGACAAGTCATGGTGCTGAAGATGAACAAGCTCCCCAGTAACCGGAGCAACACGCTAAGGGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060864.13 ENSMUST00000138981.8 |
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| CDS CAA 90 bp | GTTGCTCCGGTTACTGGGGAGCTTGTTCATCTTCAGCACCATGACTaGTCCCGACTGTCGGTGCCGAACCTTGTAGACCTCAGAGAAGAA | + |
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Preference number: 6 (lower is better) Translates to: VAPVTGELVHLQHHD*SRLSVPNLVDLREE Trigger: TTCTTCTCTGAGGTCTACAAGGTTCGGCACCGACAGTCGGGACAAGTCATGGTGCTGAAGATGAACAAGCTCCCCAGTAACCGGAGCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060864.13 ENSMUST00000138981.8 |
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