Pregenerated sensors for TES (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029552Ensembl transcript IDs: ENSMUST00000076654.9, ENSMUST00000115467.11, ENSMUST00000154266.3
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GAGAGGCCCCTCTGCCTCACCAGGGGATGCAAAGGCTTAGGCAAAGGAACGCCCAACTGCAGTTTATCATaGAATGCAGGCCACTGTGGA | + |
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Preference number: 2 (lower is better) Translates to: ERPLCLTRGCKGLGKGTPNCSLS*NAGHCG Trigger: TCCACAGTGGCCTGCATTTCATGATAAACTGCAGTT...GGGCGTTCCTTTGCCTAAGCCTTTGCATCCCCTGGTGAGGCAGAGGGGCCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| 3UTR-3UTR TCA 90 bp | CATAGAAAATATGCAAGGCCACAGATGGCGGTCACTAGATGCAAAAGCGAACATGAGAGAGAGATGCAGTaGGAGAGGCCCCTCTGCCTC | + |
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Preference number: 2 (lower is better) Translates to: HRKYARPQMAVTRCKSEHEREMQ*ERPLCL Trigger: GAGGCAGAGGGGCCTCTCTCACTGCATCTCTCTCTC...ATGTTCGCTTTTGCATCTAGTGACCGCCATCTGTGGCCTTGCATATTTTCTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| 3UTR-3UTR CCA 90 bp | AGAGGTAGCACAAGAGAGGATCCATCTGGTAACACCATAAATCATGCAAAATTGAAGGAACGCCCATCGTaGACCACGCTGTCTGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: RGSTREDPSGNTINHAKLKERPS*TTLSAR Trigger: TCTGGCAGACAGCGTGGTCCACGATGGGCGTTCCTT...CAATTTTGCATGATTTATGGTGTTACCAGATGGATCCTCTCTTGTGCTACCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| 3UTR-3UTR TCA 90 bp | GTCAAGGCATGGCAGAGAGGTGATATTAGCACAAGTTACAATTCCCTGGGTACCAACTGCAGTTTATCATaGAATGCAGGCCACTGTGGA | + |
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Preference number: 2 (lower is better) Translates to: VKAWQRGDISTSYNSLGTNCSLS*NAGHCG Trigger: TCCACAGTGGCCTGCATTTCATGATAAACTGCAGTT...GGTACCCAGGGAATTGTAACTTGTGCTAATATCACCTCTCTGCCATGCCTTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| 3UTR-3UTR GCA 90 bp | GTCAAGGCATGGCAGAGAGGTGATATTAGCACAAGTTACAATTCCCTGGGTACCTCTCTAAGAGCAAAGTaGACATATTGTTCCAGCCAC | + |
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Preference number: 2 (lower is better) Translates to: VKAWQRGDISTSYNSLGTSLRAK*TYCSSH Trigger: GTGGCTGGAACAATATGTGCACTTTGCTCTTAGAGA...GGTACCCAGGGAATTGTAACTTGTGCTAATATCACCTCTCTGCCATGCCTTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| 3UTR-3UTR CCA 90 bp | CATGGCAGAGAGGTGATATTAGCACAAGTTACAATTCCCTGGGTACCAAAACCTATGCAAGGCCACAGATaGCGGTCACTAGATGCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: HGREVILAQVTIPWVPKPMQGHR*RSLDAK Trigger: TTTTGCATCTAGTGACCGCCATCTGTGGCCTTGCAT...AGGTTTTGGTACCCAGGGAATTGTAACTTGTGCTAATATCACCTCTCTGCCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| 3UTR-3UTR CCA 90 bp | AGAGGTAGCACAAGAGAGGATCCATCTGGTAACACCATAAATCATGCAAAATTGATGCAAGGCCACAGATaGCGGTCACTAGATGCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: RGSTREDPSGNTINHAKLMQGHR*RSLDAK Trigger: TTTTGCATCTAGTGACCGCCATCTGTGGCCTTGCAT...CAATTTTGCATGATTTATGGTGTTACCAGATGGATCCTCTCTTGTGCTACCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| 3UTR-3UTR GCA 90 bp | CACAAGTTACAATTCCCTGGGTACCAAAACCTATACATATTCTTTGGGTTTCAATCATGTCAGGCAACATaGAACTTCCTTTACATTTCC | + |
|
Preference number: 2 (lower is better) Translates to: HKLQFPGYQNLYIFFGFQSCQAT*NFLYIS Trigger: GGAAATGTAAAGGAAGTTGCATGTTGCCTGACATGA...TTGAAACCCAAAGAATATGTATAGGTTTTGGTACCCAGGGAATTGTAACTTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| 3UTR CCA 72 bp | TTCAAACTGCAGTTTATCATGAAATGCAGGCCACTGTaGACAGCTATGGCTCCATACGGCTTGGTACACTCC | + |
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Preference number: 3 (lower is better) Translates to: FKLQFIMKCRPL*TAMAPYGLVHS Trigger: GGAGTGTACCAAGCCGTATGGAGCCATAGCTGTCCACAGTGGCCTGCATTTCATGATAAACTGCAGTTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| 3UTR CCA 72 bp | GGCAGAGAGGTGATATTAGCACAAGTTACAATTCCCTaGGTACCAAAACCTATACATATTCTTTGGGTTTCA | + |
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Preference number: 3 (lower is better) Translates to: GREVILAQVTIP*VPKPIHILWVS Trigger: TGAAACCCAAAGAATATGTATAGGTTTTGGTACCCAGGGAATTGTAACTTGTGCTAATATCACCTCTCTGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS-3UTR GCA 90 bp | AGGAACGCCCATCGTGGACCACGCTGTCTGCCAGAAGGATTCACCGAGCTGATGAGCTGTTTCGCCAGCTaGTTCTTCCGGTACTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RNAHRGPRCLPEGFTELMSCFAS*FFRYCA Trigger: GGCACAGTACCGGAAGAAGCAGCTGGCGAAACAGCT...CATCAGCTCGGTGAATCCTTCTGGCAGACAGCGTGGTCCACGATGGGCGTTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS-3UTR TCA 90 bp | TCCATCGATGAGGCAGGCTATGTGCACAGCGTCATGTCAGGCAACATGCAACTTGAAGGATCCTGGTCATaGGCCGGGAGCTGTTTCGCC | + |
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Preference number: 4 (lower is better) Translates to: SIDEAGYVHSVMSGNMQLEGSWS*AGSCFA Trigger: GGCGAAACAGCTCCCGGCTCATGACCAGGATCCTTC...AAGTTGCATGTTGCCTGACATGACGCTGTGCACATAGCCTGCCTCATCGATGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS-3UTR TCA 90 bp | GAGGCCCCTCTGCCTCACCAGGGGATGCAAAGGCTTAGGCAAAGGAACGCCCATACACAGGCTTGTCAGTaGCCATCACGTAGATTTTCC | + |
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Preference number: 4 (lower is better) Translates to: EAPLPHQGMQRLRQRNAHTQACQ*PSRRFS Trigger: GGAAAATCTACGTGATGGTCACTGACAAGCCTGTGT...ATGGGCGTTCCTTTGCCTAAGCCTTTGCATCCCCTGGTGAGGCAGAGGGGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS-3UTR GCA 90 bp | AGGAACGCCCATCGTGGACCACGCTGTCTGCCAGAAGGATTCACCGAGCTGATGCACTCTGTGGATGCGTaGCAGCTGAAGTTGTTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RNAHRGPRCLPEGFTELMHSVDA*QLKLLY Trigger: GTACAACAACTTCAGCTGGCACGCATCCACAGAGTG...CATCAGCTCGGTGAATCCTTCTGGCAGACAGCGTGGTCCACGATGGGCGTTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS-3UTR TCA 90 bp | TCCAGCCACACACATAGAAAATATGCAAGGCCACAGATGGCGGTCACTAGATGCGCCAGAGCCTGGTTTTaGACTGGGGGAGCCCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSHTHRKYARPQMAVTRCARAWF*TGGAHS Trigger: TGAGTGGGCTCCCCCAGTTCAAAACCAGGCTCTGGC...GCATCTAGTGACCGCCATCTGTGGCCTTGCATATTTTCTATGTGTGTGGCTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS-3UTR TCA 90 bp | TCCAGCCACACACATAGAAAATATGCAAGGCCACAGATGGCGGTCACTAGATGCGTACTGTGCCCCCTCTaGACCTGCCACTGGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSHTHRKYARPQMAVTRCVLCPL*TCHWLL Trigger: AAGCAGCCAGTGGCAGGTTCAGAGGGGGCACAGTAC...GCATCTAGTGACCGCCATCTGTGGCCTTGCATATTTTCTATGTGTGTGGCTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS-3UTR TCA 90 bp | TCGTGGACCACGCTGTCTGCCAGAAGGATTCACCGAGCTGATGTCACCTTGTCAGCATTGTGGCATCCTTaGCACACCACAGCATGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SWTTLSARRIHRADVTLSALWHP*HTTAWF Trigger: GAACCATGCTGTGGTGTGTCAAGGATGCCACAATGC...TGACAAGGTGACATCAGCTCGGTGAATCCTTCTGGCAGACAGCGTGGTCCACGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| 3UTR CAA 72 bp | CTGTCTGCCAGAAGGATTCACCGAGCTGATGTCACCTaGTCATCCATCGATGAGGCAGGCTATGTGCACAGC | + |
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Preference number: 4 (lower is better) Translates to: LSARRIHRADVT*SSIDEAGYVHS Trigger: GCTGTGCACATAGCCTGCCTCATCGATGGATGACAAGGTGACATCAGCTCGGTGAATCCTTCTGGCAGACAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS-3UTR TCA 90 bp | AGGAACGCCCATCGTGGACCACGCTGTCTGCCAGAAGGATTCACCGAGCTGATGACGTCATGCTCTTCTTaGCCACATTTGCAGTTACGA | + |
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Preference number: 4 (lower is better) Translates to: RNAHRGPRCLPEGFTELMTSCSS*PHLQLR Trigger: TCGTAACTGCAAATGTGGTCAAGAAGAGCATGACGT...CATCAGCTCGGTGAATCCTTCTGGCAGACAGCGTGGTCCACGATGGGCGTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS-3UTR TCA 90 bp | TGTCATCCATCGATGAGGCAGGCTATGTGCACAGCGTCATGTCAGGCAACATGCTGCACCTTGTCACCCTaGGCATTCATCTCAGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CHPSMRQAMCTASCQATCCTLSP*AFISEG Trigger: TCCCTCTGAGATGAATGCTCAGGGTGACAAGGTGCA...GCATGTTGCCTGACATGACGCTGTGCACATAGCCTGCCTCATCGATGGATGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS-3UTR GCA 90 bp | TCGATGAGGCAGGCTATGTGCACAGCGTCATGTCAGGCAACATGCAACTTCCTTGAACCTGCCACTGGCTaGTTCTCCTTAGGCAGCATC | + |
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Preference number: 4 (lower is better) Translates to: SMRQAMCTASCQATCNFLEPATG*FSLGSI Trigger: GATGCTGCCTAAGGAGAAGCAGCCAGTGGCAGGTTC...AAGGAAGTTGCATGTTGCCTGACATGACGCTGTGCACATAGCCTGCCTCATCGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS-3UTR CCA 90 bp | GAGGCCCCTCTGCCTCACCAGGGGATGCAAAGGCTTAGGCAAAGGAACGCCCATAATACTGGGTCTTCTTaGATTCTGCAGACTTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: EAPLPHQGMQRLRQRNAHNTGSS*ILQTCP Trigger: AGGACAAGTCTGCAGAATCCAAGAAGACCCAGTATT...ATGGGCGTTCCTTTGCCTAAGCCTTTGCATCCCCTGGTGAGGCAGAGGGGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS-3UTR CCA 90 bp | CTGCAGTTTATCATGAAATGCAGGCCACTGTGGACAGCTATGGCTCCATACGGCGCACTTCCGGGTCGATaGCATTGTGGCATCCTTGAC | + |
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Preference number: 4 (lower is better) Translates to: LQFIMKCRPLWTAMAPYGALPGR*HCGILD Trigger: GTCAAGGATGCCACAATGCCATCGACCCGGAAGTGC...GCCGTATGGAGCCATAGCTGTCCACAGTGGCCTGCATTTCATGATAAACTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS-3UTR TCA 90 bp | TTTCAAACTGCAGTTTATCATGAAATGCAGGCCACTGTGGACAGCTATGGCTCCGAAGGATCCTGGTCATaGGCCGGGAGCTGTTTCGCC | + |
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Preference number: 4 (lower is better) Translates to: FQTAVYHEMQATVDSYGSEGSWS*AGSCFA Trigger: GGCGAAACAGCTCCCGGCTCATGACCAGGATCCTTC...GGAGCCATAGCTGTCCACAGTGGCCTGCATTTCATGATAAACTGCAGTTTGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS-3UTR CCA 90 bp | AGGCAGGCTATGTGCACAGCGTCATGTCAGGCAACATGCAACTTCCTTTACATTCTGCAGACTTGTCCTTaGAAGCCACTGCTGCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: RQAMCTASCQATCNFLYILQTCP*KPLLLG Trigger: CCCCAGCAGCAGTGGCTTCCAAGGACAAGTCTGCAG...AATGTAAAGGAAGTTGCATGTTGCCTGACATGACGCTGTGCACATAGCCTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS-3UTR GCA 90 bp | AGGCAGGCTATGTGCACAGCGTCATGTCAGGCAACATGCAACTTCCTTTACATTGAACCTGCCACTGGCTaGTTCTCCTTAGGCAGCATC | + |
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Preference number: 4 (lower is better) Translates to: RQAMCTASCQATCNFLYIEPATG*FSLGSI Trigger: GATGCTGCCTAAGGAGAAGCAGCCAGTGGCAGGTTC...AATGTAAAGGAAGTTGCATGTTGCCTGACATGACGCTGTGCACATAGCCTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS-3UTR GCA 90 bp | TGTCATCCATCGATGAGGCAGGCTATGTGCACAGCGTCATGTCAGGCAACATGCGGTCTTCTTGGATTCTaGAGACTTGTCCTTGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: CHPSMRQAMCTASCQATCGLLGF*RLVLGS Trigger: GCTTCCAAGGACAAGTCTGCAGAATCCAAGAAGACC...GCATGTTGCCTGACATGACGCTGTGCACATAGCCTGCCTCATCGATGGATGACA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS-3UTR CCA 90 bp | TCGTGGACCACGCTGTCTGCCAGAAGGATTCACCGAGCTGATGTCACCTTGTCACGTTGCGTTTGTACATaGGAATGCCATCTGACTTCA | + |
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Preference number: 4 (lower is better) Translates to: SWTTLSARRIHRADVTLSRCVCT*ECHLTS Trigger: TGAAGTCAGATGGCATTCCCATGTACAAACGCAACG...TGACAAGGTGACATCAGCTCGGTGAATCCTTCTGGCAGACAGCGTGGTCCACGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS-3UTR CCA 90 bp | TCCAGCCACACACATAGAAAATATGCAAGGCCACAGATGGCGGTCACTAGATGCTTCCCTGCTAGGATGTaGTCGCAGTCAAAGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: SSHTHRKYARPQMAVTRCFPARM*SQSKQQ Trigger: CTGCTGCTTTGACTGCGACCACATCCTAGCAGGGAA...GCATCTAGTGACCGCCATCTGTGGCCTTGCATATTTTCTATGTGTGTGGCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS-3UTR CCA 90 bp | AGGCAGGCTATGTGCACAGCGTCATGTCAGGCAACATGCAACTTCCTTTACATTGCACTTCCGGGTCGATaGCATTGTGGCATCCTTGAC | + |
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Preference number: 4 (lower is better) Translates to: RQAMCTASCQATCNFLYIALPGR*HCGILD Trigger: GTCAAGGATGCCACAATGCCATCGACCCGGAAGTGC...AATGTAAAGGAAGTTGCATGTTGCCTGACATGACGCTGTGCACATAGCCTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS-3UTR TCA 90 bp | TGTCATCCATCGATGAGGCAGGCTATGTGCACAGCGTCATGTCAGGCAACATGCACGTCATGCTCTTCTTaGCCACATTTGCAGTTACGA | + |
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Preference number: 4 (lower is better) Translates to: CHPSMRQAMCTASCQATCTSCSS*PHLQLR Trigger: TCGTAACTGCAAATGTGGTCAAGAAGAGCATGACGT...GCATGTTGCCTGACATGACGCTGTGCACATAGCCTGCCTCATCGATGGATGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS-3UTR TCA 90 bp | GGCAGAGAGGTGATATTAGCACAAGTTACAATTCCCTGGGTACCAAAACCTATAGCCAGAGCCTGGTTTTaGACTGGGGGAGCCCACTCA | + |
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Preference number: 4 (lower is better) Translates to: GREVILAQVTIPWVPKPIARAWF*TGGAHS Trigger: TGAGTGGGCTCCCCCAGTTCAAAACCAGGCTCTGGC...TATAGGTTTTGGTACCCAGGGAATTGTAACTTGTGCTAATATCACCTCTCTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS-3UTR GCA 90 bp | TGTCATCCATCGATGAGGCAGGCTATGTGCACAGCGTCATGTCAGGCAACATGCCTTCACAGTTCTCTTTaGATTTTAGACAGGGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: CHPSMRQAMCTASCQATCLHSSL*ILDRGL Trigger: GAGCCCCCTGTCTAAAATGCAAAGAGAACTGTGAAG...GCATGTTGCCTGACATGACGCTGTGCACATAGCCTGCCTCATCGATGGATGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS-3UTR GCA 90 bp | TTCAAACTGCAGTTTATCATGAAATGCAGGCCACTGTGGACAGCTATGGCTCCAAGCTGTTTCGCCAGCTaGTTCTTCCGGTACTGTGCC | + |
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Preference number: 4 (lower is better) Translates to: FKLQFIMKCRPLWTAMAPSCFAS*FFRYCA Trigger: GGCACAGTACCGGAAGAAGCAGCTGGCGAAACAGCT...TGGAGCCATAGCTGTCCACAGTGGCCTGCATTTCATGATAAACTGCAGTTTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS-3UTR GCA 90 bp | TCCATCGATGAGGCAGGCTATGTGCACAGCGTCATGTCAGGCAACATGCAACTTGGTCTTCTTGGATTCTaGAGACTTGTCCTTGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: SIDEAGYVHSVMSGNMQLGLLGF*RLVLGS Trigger: GCTTCCAAGGACAAGTCTGCAGAATCCAAGAAGACC...AAGTTGCATGTTGCCTGACATGACGCTGTGCACATAGCCTGCCTCATCGATGGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS-3UTR TCA 90 bp | TTTCAAACTGCAGTTTATCATGAAATGCAGGCCACTGTGGACAGCTATGGCTCCTGCACCTTGTCACCCTaGGCATTCATCTCAGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: FQTAVYHEMQATVDSYGSCTLSP*AFISEG Trigger: TCCCTCTGAGATGAATGCTCAGGGTGACAAGGTGCA...GGAGCCATAGCTGTCCACAGTGGCCTGCATTTCATGATAAACTGCAGTTTGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS-3UTR TCA 90 bp | TCCAGCCACACACATAGAAAATATGCAAGGCCACAGATGGCGGTCACTAGATGCCCAAATCCTTGCTCATaGCCTAAGCCCATCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: SSHTHRKYARPQMAVTRCPNPCS*PKPIFF Trigger: GAAGAAGATGGGCTTAGGTCATGAGCAAGGATTTGG...GCATCTAGTGACCGCCATCTGTGGCCTTGCATATTTTCTATGTGTGTGGCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115467.11 |
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| CDS-3UTR GCA 90 bp | CTGCAGTTTATCATGAAATGCAGGCCACTGTGGACAGCTATGGCTCCATACGGCCTTCACAGTTCTCTTTaGATTTTAGACAGGGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: LQFIMKCRPLWTAMAPYGLHSSL*ILDRGL Trigger: GAGCCCCCTGTCTAAAATGCAAAGAGAACTGTGAAG...GCCGTATGGAGCCATAGCTGTCCACAGTGGCCTGCATTTCATGATAAACTGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS-3UTR GCA 90 bp | TCCATCGATGAGGCAGGCTATGTGCACAGCGTCATGTCAGGCAACATGCAACTTTGTCACAGTAATGTCTaGCACAGTACAGCTTCCCAT | + |
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Preference number: 4 (lower is better) Translates to: SIDEAGYVHSVMSGNMQLCHSNV*HSTASH Trigger: ATGGGAAGCTGTACTGTGGCAGACATTACTGTGACA...AAGTTGCATGTTGCCTGACATGACGCTGTGCACATAGCCTGCCTCATCGATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS-3UTR GCA 90 bp | TCCATCGATGAGGCAGGCTATGTGCACAGCGTCATGTCAGGCAACATGCAACTTCAGAAGTGCTTCAGGTaGCAATTCTGGTTTTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: SIDEAGYVHSVMSGNMQLQKCFR*QFWFSA Trigger: AGCAGAAAACCAGAATTGGCACCTGAAGCACTTCTG...AAGTTGCATGTTGCCTGACATGACGCTGTGCACATAGCCTGCCTCATCGATGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS-3UTR TCA 90 bp | AGGCAGGCTATGTGCACAGCGTCATGTCAGGCAACATGCAACTTCCTTTACATTACACAGGCTTGTCAGTaGCCATCACGTAGATTTTCC | + |
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Preference number: 4 (lower is better) Translates to: RQAMCTASCQATCNFLYITQACQ*PSRRFS Trigger: GGAAAATCTACGTGATGGTCACTGACAAGCCTGTGT...AATGTAAAGGAAGTTGCATGTTGCCTGACATGACGCTGTGCACATAGCCTGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS-3UTR CCA 90 bp | GTCAAGGCATGGCAGAGAGGTGATATTAGCACAAGTTACAATTCCCTGGGTACCTTGGGAGACAACTCATaGCACTTAGAAGGATCCTGG | + |
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Preference number: 4 (lower is better) Translates to: VKAWQRGDISTSYNSLGTLGDNS*HLEGSW Trigger: CCAGGATCCTTCTAAGTGCCATGAGTTGTCTCCCAA...GGTACCCAGGGAATTGTAACTTGTGCTAATATCACCTCTCTGCCATGCCTTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS-3UTR CCA 90 bp | AGGCTATGTGCACAGCGTCATGTCAGGCAACATGCAACTTCCTTTACATTTCCCTCTCCTTCACCTCTTTaGGAGACAACTCATGGCACT | + |
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Preference number: 4 (lower is better) Translates to: RLCAQRHVRQHATSFTFPSPSPL*ETTHGT Trigger: AGTGCCATGAGTTGTCTCCCAAAGAGGTGAAGGAGA...GGGAAATGTAAAGGAAGTTGCATGTTGCCTGACATGACGCTGTGCACATAGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS-3UTR CCA 90 bp | CTGCAGTTTATCATGAAATGCAGGCCACTGTGGACAGCTATGGCTCCATACGGCAATACTGGGTCTTCTTaGATTCTGCAGACTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LQFIMKCRPLWTAMAPYGNTGSS*ILQTCP Trigger: AGGACAAGTCTGCAGAATCCAAGAAGACCCAGTATT...GCCGTATGGAGCCATAGCTGTCCACAGTGGCCTGCATTTCATGATAAACTGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS-3UTR GCA 90 bp | TCGATGAGGCAGGCTATGTGCACAGCGTCATGTCAGGCAACATGCAACTTCCTTTATTTCTTCACAAACTaGTCCATCTCCTTCACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SMRQAMCTASCQATCNFLYFFTN*SISFTS Trigger: AGAGGTGAAGGAGATGGAGCAGTTTGTGAAGAAATA...AAGGAAGTTGCATGTTGCCTGACATGACGCTGTGCACATAGCCTGCCTCATCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS-3UTR GCA 90 bp | AGGCTATGTGCACAGCGTCATGTCAGGCAACATGCAACTTCCTTTACATTTCCCTGTCACAGTAATGTCTaGCACAGTACAGCTTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RLCAQRHVRQHATSFTFPCHSNV*HSTASH Trigger: ATGGGAAGCTGTACTGTGGCAGACATTACTGTGACA...GGGAAATGTAAAGGAAGTTGCATGTTGCCTGACATGACGCTGTGCACATAGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS-3UTR GCA 90 bp | TGCACAGCGTCATGTCAGGCAACATGCAACTTCCTTTACATTTCCCATGTGAAACACTCTGTGGATGCGTaGCAGCTGAAGTTGTTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: CTASCQATCNFLYISHVKHSVDA*QLKLLY Trigger: GTACAACAACTTCAGCTGGCACGCATCCACAGAGTG...TTTCACATGGGAAATGTAAAGGAAGTTGCATGTTGCCTGACATGACGCTGTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS-3UTR CCA 90 bp | TGCACAGCGTCATGTCAGGCAACATGCAACTTCCTTTACATTTCCCATGTGAAATGGAGACGTTCTTCTTaGCAGCCACTGGATTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CTASCQATCNFLYISHVKWRRSS*QPLDWS Trigger: TGACCAATCCAGTGGCTGCCAAGAAGAACGTCTCCA...TTTCACATGGGAAATGTAAAGGAAGTTGCATGTTGCCTGACATGACGCTGTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS-3UTR CCA 90 bp | AGAGAGGTGATATTAGCACAAGTTACAATTCCCTGGGTACCAAAACCTATACATCTGCAGACTTGTCCTTaGAAGCCACTGCTGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: REVILAQVTIPWVPKPIHLQTCP*KPLLLG Trigger: CCCCAGCAGCAGTGGCTTCCAAGGACAAGTCTGCAG...ATGTATAGGTTTTGGTACCCAGGGAATTGTAACTTGTGCTAATATCACCTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS-3UTR TCA 90 bp | AGAGGTAGCACAAGAGAGGATCCATCTGGTAACACCATAAATCATGCAAAATTGGCATTGTGGCATCCTTaGCACACCACAGCATGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RGSTREDPSGNTINHAKLALWHP*HTTAWF Trigger: GAACCATGCTGTGGTGTGTCAAGGATGCCACAATGC...CAATTTTGCATGATTTATGGTGTTACCAGATGGATCCTCTCTTGTGCTACCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS-3UTR GCA 90 bp | TCAAGGCATGGCAGAGAGGTGATATTAGCACAAGTTACAATTCCCTGGGTACCACAGAAGTGCTTCAGGTaGCAATTCTGGTTTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SRHGREVILAQVTIPWVPQKCFR*QFWFSA Trigger: AGCAGAAAACCAGAATTGGCACCTGAAGCACTTCTG...TGGTACCCAGGGAATTGTAACTTGTGCTAATATCACCTCTCTGCCATGCCTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS-3UTR CCA 90 bp | AGAGGTAGCACAAGAGAGGATCCATCTGGTAACACCATAAATCATGCAAAATTGTTCCCTGCTAGGATGTaGTCGCAGTCAAAGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RGSTREDPSGNTINHAKLFPARM*SQSKQQ Trigger: CTGCTGCTTTGACTGCGACCACATCCTAGCAGGGAA...CAATTTTGCATGATTTATGGTGTTACCAGATGGATCCTCTCTTGTGCTACCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS-3UTR CCA 90 bp | TGCACAGCGTCATGTCAGGCAACATGCAACTTCCTTTACATTTCCCATGTGAAACGTTGCGTTTGTACATaGGAATGCCATCTGACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CTASCQATCNFLYISHVKRCVCT*ECHLTS Trigger: TGAAGTCAGATGGCATTCCCATGTACAAACGCAACG...TTTCACATGGGAAATGTAAAGGAAGTTGCATGTTGCCTGACATGACGCTGTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS-3UTR CCA 90 bp | AGAGGTAGCACAAGAGAGGATCCATCTGGTAACACCATAAATCATGCAAAATTGTGGAGACGTTCTTCTTaGCAGCCACTGGATTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RGSTREDPSGNTINHAKLWRRSS*QPLDWS Trigger: TGACCAATCCAGTGGCTGCCAAGAAGAACGTCTCCA...CAATTTTGCATGATTTATGGTGTTACCAGATGGATCCTCTCTTGTGCTACCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS-3UTR GCA 90 bp | AGGCAGGCTATGTGCACAGCGTCATGTCAGGCAACATGCAACTTCCTTTACATTCTTCTTGACCACATTTaGAGTTACGACATATTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RQAMCTASCQATCNFLYILLDHI*SYDIFS Trigger: GGAAAATATGTCGTAACTGCAAATGTGGTCAAGAAG...AATGTAAAGGAAGTTGCATGTTGCCTGACATGACGCTGTGCACATAGCCTGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS-3UTR GCA 90 bp | TTTCAAACTGCAGTTTATCATGAAATGCAGGCCACTGTGGACAGCTATGGCTCCTATTTCTTCACAAACTaGTCCATCTCCTTCACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FQTAVYHEMQATVDSYGSYFFTN*SISFTS Trigger: AGAGGTGAAGGAGATGGAGCAGTTTGTGAAGAAATA...GGAGCCATAGCTGTCCACAGTGGCCTGCATTTCATGATAAACTGCAGTTTGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS-3UTR GCA 90 bp | AGAGGTAGCACAAGAGAGGATCCATCTGGTAACACCATAAATCATGCAAAATTGGTTTGTACATGGGAATaGCATCTGACTTCAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RGSTREDPSGNTINHAKLVCTWE*HLTSAW Trigger: CCAAGCTGAAGTCAGATGGCATTCCCATGTACAAAC...CAATTTTGCATGATTTATGGTGTTACCAGATGGATCCTCTCTTGTGCTACCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS-3UTR GCA 90 bp | TGCACAGCGTCATGTCAGGCAACATGCAACTTCCTTTACATTTCCCATGTGAAACTTCTTGACCACATTTaGAGTTACGACATATTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CTASCQATCNFLYISHVKLLDHI*SYDIFS Trigger: GGAAAATATGTCGTAACTGCAAATGTGGTCAAGAAG...TTTCACATGGGAAATGTAAAGGAAGTTGCATGTTGCCTGACATGACGCTGTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS-3UTR CCA 90 bp | CACAAGTTACAATTCCCTGGGTACCAAAACCTATACATATTCTTTGGGTTTCAATCTCCTTCACCTCTTTaGGAGACAACTCATGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: HKLQFPGYQNLYIFFGFQSPSPL*ETTHGT Trigger: AGTGCCATGAGTTGTCTCCCAAAGAGGTGAAGGAGA...TTGAAACCCAAAGAATATGTATAGGTTTTGGTACCCAGGGAATTGTAACTTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS-3UTR CCA 90 bp | TTCAAACTGCAGTTTATCATGAAATGCAGGCCACTGTGGACAGCTATGGCTCCATTCTGGTTTTCTGCTTaGGTATATTCATTGCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FKLQFIMKCRPLWTAMAPFWFSA*VYSLLN Trigger: ATTCAGCAATGAATATACCCAAGCAGAAAACCAGAA...TGGAGCCATAGCTGTCCACAGTGGCCTGCATTTCATGATAAACTGCAGTTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS-3UTR CCA 90 bp | AGAGGTAGCACAAGAGAGGATCCATCTGGTAACACCATAAATCATGCAAAATTGTTCAGGTGCCAATTCTaGTTTTCTGCTTGGGTATAT | + |
|
Preference number: 4 (lower is better) Translates to: RGSTREDPSGNTINHAKLFRCQF*FSAWVY Trigger: ATATACCCAAGCAGAAAACCAGAATTGGCACCTGAA...CAATTTTGCATGATTTATGGTGTTACCAGATGGATCCTCTCTTGTGCTACCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS-3UTR CCA 90 bp | GGCAGAGAGGTGATATTAGCACAAGTTACAATTCCCTGGGTACCAAAACCTATATTCTGGTTTTCTGCTTaGGTATATTCATTGCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GREVILAQVTIPWVPKPIFWFSA*VYSLLN Trigger: ATTCAGCAATGAATATACCCAAGCAGAAAACCAGAA...TATAGGTTTTGGTACCCAGGGAATTGTAACTTGTGCTAATATCACCTCTCTGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS-3UTR CCA 90 bp | AGAGAGGTGATATTAGCACAAGTTACAATTCCCTGGGTACCAAAACCTATACATTTCAGGTGCCAATTCTaGTTTTCTGCTTGGGTATAT | + |
|
Preference number: 4 (lower is better) Translates to: REVILAQVTIPWVPKPIHFRCQF*FSAWVY Trigger: ATATACCCAAGCAGAAAACCAGAATTGGCACCTGAA...ATGTATAGGTTTTGGTACCCAGGGAATTGTAACTTGTGCTAATATCACCTCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS GCA 90 bp | AGCTGCTTCTTCCGGTACTGTGCCCCCTCTGAACCTGCCACTGGCTaGTTCTCCTTAGGCAGCATCTGCATGTACTGCCTGGCCAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SCFFRYCAPSEPATG*FSLGSICMYCLARA Trigger: GGCTCTGGCCAGGCAGTACATGCAGATGCTGCCTAAGGAGAAGCAGCCAGTGGCAGGTTCAGAGGGGGCACAGTACCGGAAGAAGCAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 ENSMUST00000154266.3 |
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| CDS GCA 90 bp | CTGGGTCTTCTTGGATTCTGCAGACTTGTCCTTGGAAGCCACTGCTaGTGGGGCGTGTCTGTTCCCCGCAGGGTTGTGCACCTTGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: LGLLGFCRLVLGSHC*WGVSVPRRVVHLVT Trigger: GGTGACAAGGTGCACAACCCTGCGGGGAACAGACACGCCCCAGCAGCAGTGGCTTCCAAGGACAAGTCTGCAGAATCCAAGAAGACCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS CCA 90 bp | ACGCCGGGTGCCAGAGCTTATCGTAGCCAGCCCTTTCAGCATAGATaGCCGGCTCGCCTTCGTTCATGGTGTGTTTGCAGCAGTAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: TPGARAYRSQPFQHR*PARLRSWCVCSSNR Trigger: CCTGTTACTGCTGCAAACACACCATGAACGAAGGCGAGCCGGCCATCTATGCTGAAAGGGCTGGCTACGATAAGCTCTGGCACCCGGCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS-3UTR CAA 90 bp | GAGAGGCCCCTCTGCCTCACCAGGGGATGCAAAGGCTTAGGCAAAGGAACGCCCTTGGATTCTGCAGACTaGTCCTTGGAAGCCACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ERPLCLTRGCKGLGKGTPLDSAD*SLEATA Trigger: AGCAGTGGCTTCCAAGGACAAGTCTGCAGAATCCAA...GGGCGTTCCTTTGCCTAAGCCTTTGCATCCCCTGGTGAGGCAGAGGGGCCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS-3UTR CAA 90 bp | AGGAACGCCCATCGTGGACCACGCTGTCTGCCAGAAGGATTCACCGAGCTGATGTGCCCGATAAGACACTaGCTGCAGCAAGAGCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: RNAHRGPRCLPEGFTELMCPIRH*LQQEHR Trigger: CCTGTGCTCTTGCTGCAGCAAGTGTCTTATCGGGCA...CATCAGCTCGGTGAATCCTTCTGGCAGACAGCGTGGTCCACGATGGGCGTTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS GCA 90 bp | ATACTGGGTCTTCTTGGATTCTGCAGACTTGTCCTTGGAAGCCACTaGTGCTGGGGCGTGTCTGTTCCCCGCAGGGTTGTGCACCTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: ILGLLGFCRLVLGSH*CWGVSVPRRVVHLV Trigger: GACAAGGTGCACAACCCTGCGGGGAACAGACACGCCCCAGCAGCAGTGGCTTCCAAGGACAAGTCTGCAGAATCCAAGAAGACCCAGTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS TCA 90 bp | ACCTCTTTGGGAGACAACTCATGGCACTTAGAAGGATCCTGGTCATaGGCCGGGAGCTGTTTCGCCAGCTGCTTCTTCCGGTACTGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: TSLGDNSWHLEGSWS*AGSCFASCFFRYCA Trigger: GGCACAGTACCGGAAGAAGCAGCTGGCGAAACAGCTCCCGGCTCATGACCAGGATCCTTCTAAGTGCCATGAGTTGTCTCCCAAAGAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS-3UTR CAA 90 bp | GAGGCCCCTCTGCCTCACCAGGGGATGCAAAGGCTTAGGCAAAGGAACGCCCATGACGTCATGCTCTTCTaGACCACATTTGCAGTTACG | + |
|
Preference number: 5 (lower is better) Translates to: EAPLPHQGMQRLRQRNAHDVMLF*TTFAVT Trigger: CGTAACTGCAAATGTGGTCAAGAAGAGCATGACGTC...ATGGGCGTTCCTTTGCCTAAGCCTTTGCATCCCCTGGTGAGGCAGAGGGGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS-3UTR CAA 90 bp | TGTCATCCATCGATGAGGCAGGCTATGTGCACAGCGTCATGTCAGGCAACATGCTTCCGGTCCTCCTCATaGCTCAGGAGGACGTCATGC | + |
|
Preference number: 5 (lower is better) Translates to: CHPSMRQAMCTASCQATCFRSSS*LRRTSC Trigger: GCATGACGTCCTCCTGAGCAATGAGGAGGACCGGAA...GCATGTTGCCTGACATGACGCTGTGCACATAGCCTGCCTCATCGATGGATGACA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS TCA 90 bp | TGCTGCAGCAAGAGCACAGGAAACACTCTGTGGATGCGTGCCAGCTaGAGTTGTTGTACGTTACTCGCTGCACTTCCGGGTCGATGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: CCSKSTGNTLWMRAS*SCCTLLAALPGRWH Trigger: ATGCCATCGACCCGGAAGTGCAGCGAGTAACGTACAACAACTTCAGCTGGCACGCATCCACAGAGTGTTTCCTGTGCTCTTGCTGCAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS GCA 90 bp | AGACACTTGCTGCAGCAAGAGCACAGGAAACACTCTGTGGATGCGTaGCAGCTGAAGTTGTTGTACGTTACTCGCTGCACTTCCGGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: RHLLQQEHRKHSVDA*QLKLLYVTRCTSGS Trigger: CGACCCGGAAGTGCAGCGAGTAACGTACAACAACTTCAGCTGGCACGCATCCACAGAGTGTTTCCTGTGCTCTTGCTGCAGCAAGTGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS CCA 90 bp | AGTAACAGGAATACTGGGTCTTCTTGGATTCTGCAGACTTGTCCTTaGAAGCCACTGCTGCTGGGGCGTGTCTGTTCCCCGCAGGGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SNRNTGSSWILQTCP*KPLLLGRVCSPQGC Trigger: ACAACCCTGCGGGGAACAGACACGCCCCAGCAGCAGTGGCTTCCAAGGACAAGTCTGCAGAATCCAAGAAGACCCAGTATTCCTGTTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS-3UTR CAA 90 bp | TCGTGGACCACGCTGTCTGCCAGAAGGATTCACCGAGCTGATGTCACCTTGTCATGCCAGCTGAAGTTGTaGTACGTTACTCGCTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: SWTTLSARRIHRADVTLSCQLKL*YVTRCT Trigger: AGTGCAGCGAGTAACGTACAACAACTTCAGCTGGCA...TGACAAGGTGACATCAGCTCGGTGAATCCTTCTGGCAGACAGCGTGGTCCACGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS GCA 90 bp | GATAAGACACTTGCTGCAGCAAGAGCACAGGAAACACTCTGTGGATaGGTGCCAGCTGAAGTTGTTGTACGTTACTCGCTGCACTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: DKTLAAARAQETLCG*VPAEVVVRYSLHFR Trigger: CCGGAAGTGCAGCGAGTAACGTACAACAACTTCAGCTGGCACGCATCCACAGAGTGTTTCCTGTGCTCTTGCTGCAGCAAGTGTCTTATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS CCA 90 bp | CGTAGCCAGCCCTTTCAGCATAGATGGCCGGCTCGCCTTCGTTCATaGTGTGTTTGCAGCAGTAACAGGAATACTGGGTCTTCTTGGATT | + |
|
Preference number: 5 (lower is better) Translates to: RSQPFQHRWPARLRS*CVCSSNRNTGSSWI Trigger: AATCCAAGAAGACCCAGTATTCCTGTTACTGCTGCAAACACACCATGAACGAAGGCGAGCCGGCCATCTATGCTGAAAGGGCTGGCTACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS-3UTR CAA 90 bp | TCCAGCCACACACATAGAAAATATGCAAGGCCACAGATGGCGGTCACTAGATGCCCATCTGACTTCAGCTaGGCGATCAGGGTGGTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SSHTHRKYARPQMAVTRCPSDFS*AIRVVY Trigger: GTACACCACCCTGATCGCCAAGCTGAAGTCAGATGG...GCATCTAGTGACCGCCATCTGTGGCCTTGCATATTTTCTATGTGTGTGGCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS-3UTR CAA 90 bp | TGTCATCCATCGATGAGGCAGGCTATGTGCACAGCGTCATGTCAGGCAACATGCCCCAGGGCCTCACTCTaGTATTTCTTCACAAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: CHPSMRQAMCTASCQATCPRASL*YFFTNC Trigger: GCAGTTTGTGAAGAAATACAAGAGTGAGGCCCTGGG...GCATGTTGCCTGACATGACGCTGTGCACATAGCCTGCCTCATCGATGGATGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS TCA 90 bp | CAGCATGGTTCTTCACATAGCAGGGCTTGCACACAGGCTTGTCAGTaGCCATCACGTAGATTTTCCCTGCTAGGATGTGGTCGCAGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: QHGSSHSRACTQACQ*PSRRFSLLGCGRSQ Trigger: TTGACTGCGACCACATCCTAGCAGGGAAAATCTACGTGATGGTCACTGACAAGCCTGTGTGCAAGCCCTGCTATGTGAAGAACCATGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS GCA 90 bp | ACGTCACCCACGCCCAGGGCCTCACTCTTGTATTTCTTCACAAACTaGTCCATCTCCTTCACCTCTTTGGGAGACAACTCATGGCACTTA | + |
|
Preference number: 5 (lower is better) Translates to: TSPTPRASLLYFFTN*SISFTSLGDNSWHL Trigger: TAAGTGCCATGAGTTGTCTCCCAAAGAGGTGAAGGAGATGGAGCAGTTTGTGAAGAAATACAAGAGTGAGGCCCTGGGCGTGGGTGACGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS GCA 90 bp | CACTCCACGGAACAGAAAACCATCCCTTCTACGGGCATGAACTTCTaGCCGATAAGACACTTGCTGCAGCAAGAGCACAGGAAACACTCT | + |
|
Preference number: 5 (lower is better) Translates to: HSTEQKTIPSTGMNF*PIRHLLQQEHRKHS Trigger: AGAGTGTTTCCTGTGCTCTTGCTGCAGCAAGTGTCTTATCGGGCAGAAGTTCATGCCCGTAGAAGGGATGGTTTTCTGTTCCGTGGAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS-3UTR CAA 90 bp | TCGATGAGGCAGGCTATGTGCACAGCGTCATGTCAGGCAACATGCAACTTCCTTTTGGATTCTGCAGACTaGTCCTTGGAAGCCACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SMRQAMCTASCQATCNFLLDSAD*SLEATA Trigger: AGCAGTGGCTTCCAAGGACAAGTCTGCAGAATCCAA...AAGGAAGTTGCATGTTGCCTGACATGACGCTGTGCACATAGCCTGCCTCATCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS-3UTR CAA 90 bp | CTGCAGTTTATCATGAAATGCAGGCCACTGTGGACAGCTATGGCTCCATACGGCTGCCAGCTGAAGTTGTaGTACGTTACTCGCTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: LQFIMKCRPLWTAMAPYGCQLKL*YVTRCT Trigger: AGTGCAGCGAGTAACGTACAACAACTTCAGCTGGCA...GCCGTATGGAGCCATAGCTGTCCACAGTGGCCTGCATTTCATGATAAACTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS-3UTR CAA 90 bp | TCAAGGCATGGCAGAGAGGTGATATTAGCACAAGTTACAATTCCCTGGGTACCACCATCTGACTTCAGCTaGGCGATCAGGGTGGTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SRHGREVILAQVTIPWVPPSDFS*AIRVVY Trigger: GTACACCACCCTGATCGCCAAGCTGAAGTCAGATGG...TGGTACCCAGGGAATTGTAACTTGTGCTAATATCACCTCTCTGCCATGCCTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS-3UTR CAA 90 bp | TCGTGGACCACGCTGTCTGCCAGAAGGATTCACCGAGCTGATGTCACCTTGTCAATCATAACGTTGCGTTaGTACATGGGAATGCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: SWTTLSARRIHRADVTLSIITLR*YMGMPS Trigger: AGATGGCATTCCCATGTACAAACGCAACGTTATGAT...TGACAAGGTGACATCAGCTCGGTGAATCCTTCTGGCAGACAGCGTGGTCCACGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS-3UTR CAA 90 bp | TCGTGGACCACGCTGTCTGCCAGAAGGATTCACCGAGCTGATGTCACCTTGTCAGTCAAGATCATAACGTaGCGTTTGTACATGGGAATG | + |
|
Preference number: 5 (lower is better) Translates to: SWTTLSARRIHRADVTLSVKIIT*RLYMGM Trigger: CATTCCCATGTACAAACGCAACGTTATGATCTTGAC...TGACAAGGTGACATCAGCTCGGTGAATCCTTCTGGCAGACAGCGTGGTCCACGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS-3UTR CAA 90 bp | TCCATCGATGAGGCAGGCTATGTGCACAGCGTCATGTCAGGCAACATGCAACTTGAATACTGGGTCTTCTaGGATTCTGCAGACTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SIDEAGYVHSVMSGNMQLEYWVF*DSADLS Trigger: GGACAAGTCTGCAGAATCCAAGAAGACCCAGTATTC...AAGTTGCATGTTGCCTGACATGACGCTGTGCACATAGCCTGCCTCATCGATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS-3UTR CAA 90 bp | TTCAAACTGCAGTTTATCATGAAATGCAGGCCACTGTGGACAGCTATGGCTCCATGCCCGATAAGACACTaGCTGCAGCAAGAGCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: FKLQFIMKCRPLWTAMAPCPIRH*LQQEHR Trigger: CCTGTGCTCTTGCTGCAGCAAGTGTCTTATCGGGCA...TGGAGCCATAGCTGTCCACAGTGGCCTGCATTTCATGATAAACTGCAGTTTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS-3UTR CAA 90 bp | AGGCAGGCTATGTGCACAGCGTCATGTCAGGCAACATGCAACTTCCTTTACATTCCTTCACAGTTCTCTTaGCATTTTAGACAGGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RQAMCTASCQATCNFLYIPSQFS*HFRQGA Trigger: AGCCCCCTGTCTAAAATGCAAAGAGAACTGTGAAGG...AATGTAAAGGAAGTTGCATGTTGCCTGACATGACGCTGTGCACATAGCCTGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS-3UTR CAA 90 bp | GTCAAGGCATGGCAGAGAGGTGATATTAGCACAAGTTACAATTCCCTGGGTACCCCTTCACAGTTCTCTTaGCATTTTAGACAGGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VKAWQRGDISTSYNSLGTPSQFS*HFRQGA Trigger: AGCCCCCTGTCTAAAATGCAAAGAGAACTGTGAAGG...GGTACCCAGGGAATTGTAACTTGTGCTAATATCACCTCTCTGCCATGCCTTGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS-3UTR CAA 90 bp | CACAAGTTACAATTCCCTGGGTACCAAAACCTATACATATTCTTTGGGTTTCAAGGCCAGAGCCTGGTTTaGAACTGGGGGAGCCCACTC | + |
|
Preference number: 5 (lower is better) Translates to: HKLQFPGYQNLYIFFGFQGQSLV*NWGSPL Trigger: GAGTGGGCTCCCCCAGTTCAAAACCAGGCTCTGGCC...TTGAAACCCAAAGAATATGTATAGGTTTTGGTACCCAGGGAATTGTAACTTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS-3UTR CAA 90 bp | TTCAAACTGCAGTTTATCATGAAATGCAGGCCACTGTGGACAGCTATGGCTCCACCCAGGGCCTCACTCTaGTATTTCTTCACAAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: FKLQFIMKCRPLWTAMAPPRASL*YFFTNC Trigger: GCAGTTTGTGAAGAAATACAAGAGTGAGGCCCTGGG...TGGAGCCATAGCTGTCCACAGTGGCCTGCATTTCATGATAAACTGCAGTTTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS-3UTR CAA 90 bp | GTCAAGGCATGGCAGAGAGGTGATATTAGCACAAGTTACAATTCCCTGGGTACCGAATACTGGGTCTTCTaGGATTCTGCAGACTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VKAWQRGDISTSYNSLGTEYWVF*DSADLS Trigger: GGACAAGTCTGCAGAATCCAAGAAGACCCAGTATTC...GGTACCCAGGGAATTGTAACTTGTGCTAATATCACCTCTCTGCCATGCCTTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS TCA 90 bp | ACTTTCCGGTCCTCCTCATTGCTCAGGAGGACGTCATGCTCTTCTTaGCCACATTTGCAGTTACGACATATTTTCCTCCAGAAGTGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: TFRSSSLLRRTSCSS*PHLQLRHIFLQKCS Trigger: ACTACACTTCTGGAGGAAAATATGTCGTAACTGCAAATGTGGTCAAGAAGAGCATGACGTCCTCCTGAGCAATGAGGAGGACCGGAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS CCA 90 bp | CTCATAGGTAACTGTGTTGATGGAGACGTTCTTCTTGGCAGCCACTaGATTGGTCAAGATCATAACGTTGCGTTTGTACATGGGAATGCC | + |
|
Preference number: 5 (lower is better) Translates to: LIGNCVDGDVLLGSH*IGQDHNVAFVHGNA Trigger: GGCATTCCCATGTACAAACGCAACGTTATGATCTTGACCAATCCAGTGGCTGCCAAGAAGAACGTCTCCATCAACACAGTTACCTATGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS-3UTR CAA 90 bp | TGCACAGCGTCATGTCAGGCAACATGCAACTTCCTTTACATTTCCCATGTGAAAATCTCCTTCACCTCTTaGGGAGACAACTCATGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: CTASCQATCNFLYISHVKISFTS*GDNSWH Trigger: GTGCCATGAGTTGTCTCCCAAAGAGGTGAAGGAGAT...TTTCACATGGGAAATGTAAAGGAAGTTGCATGTTGCCTGACATGACGCTGTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS-3UTR CAA 90 bp | TCCAGCCACACACATAGAAAATATGCAAGGCCACAGATGGCGGTCACTAGATGCGCTTGGGTATATTCATaGCTGAATATCAGCTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSHTHRKYARPQMAVTRCAWVYS*LNISSS Trigger: TGACGAGCTGATATTCAGCAATGAATATACCCAAGC...GCATCTAGTGACCGCCATCTGTGGCCTTGCATATTTTCTATGTGTGTGGCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS TCA 90 bp | ATTGGTCAAGATCATAACGTTGCGTTTGTACATGGGAATGCCATCTaGCTTCAGCTTGGCGATCAGGGTGGTGTACTTAGTGTCCTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: IGQDHNVAFVHGNAI*LQLGDQGGVLSVLK Trigger: TTTGAGGACACTAAGTACACCACCCTGATCGCCAAGCTGAAGTCAGATGGCATTCCCATGTACAAACGCAACGTTATGATCTTGACCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS-3UTR CAA 90 bp | CATAGAAAATATGCAAGGCCACAGATGGCGGTCACTAGATGCAAAAGCGAACATGACGTCATGCTCTTCTaGACCACATTTGCAGTTACG | + |
|
Preference number: 5 (lower is better) Translates to: HRKYARPQMAVTRCKSEHDVMLF*TTFAVT Trigger: CGTAACTGCAAATGTGGTCAAGAAGAGCATGACGTC...ATGTTCGCTTTTGCATCTAGTGACCGCCATCTGTGGCCTTGCATATTTTCTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS-3UTR CAA 90 bp | GGCAGAGAGGTGATATTAGCACAAGTTACAATTCCCTGGGTACCAAAACCTATAATCTCCTTCACCTCTTaGGGAGACAACTCATGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: GREVILAQVTIPWVPKPIISFTS*GDNSWH Trigger: GTGCCATGAGTTGTCTCCCAAAGAGGTGAAGGAGAT...TATAGGTTTTGGTACCCAGGGAATTGTAACTTGTGCTAATATCACCTCTCTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS-3UTR CAA 90 bp | AGGCAGGCTATGTGCACAGCGTCATGTCAGGCAACATGCAACTTCCTTTACATTGCTTGGGTATATTCATaGCTGAATATCAGCTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RQAMCTASCQATCNFLYIAWVYS*LNISSS Trigger: TGACGAGCTGATATTCAGCAATGAATATACCCAAGC...AATGTAAAGGAAGTTGCATGTTGCCTGACATGACGCTGTGCACATAGCCTGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS-3UTR CAA 90 bp | CTGCAGTTTATCATGAAATGCAGGCCACTGTGGACAGCTATGGCTCCATACGGCATTCTGGTTTTCTGCTaGGGTATATTCATTGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: LQFIMKCRPLWTAMAPYGILVFC*GIFIAE Trigger: TTCAGCAATGAATATACCCAAGCAGAAAACCAGAAT...GCCGTATGGAGCCATAGCTGTCCACAGTGGCCTGCATTTCATGATAAACTGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS GCA 90 bp | CCTCCTCATTGCTCAGGAGGACGTCATGCTCTTCTTGACCACATTTaGAGTTACGACATATTTTCCTCCAGAAGTGTAGTTCAAATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: PPHCSGGRHALLDHI*SYDIFSSRSVVQIL Trigger: AAGGATTTGAACTACACTTCTGGAGGAAAATATGTCGTAACTGCAAATGTGGTCAAGAAGAGCATGACGTCCTCCTGAGCAATGAGGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS-3UTR CAA 90 bp | GCTATGTGCACAGCGTCATGTCAGGCAACATGCAACTTCCTTTACATTTCCCATGTCAAGATCATAACGTaGCGTTTGTACATGGGAATG | + |
|
Preference number: 5 (lower is better) Translates to: AMCTASCQATCNFLYISHVKIIT*RLYMGM Trigger: CATTCCCATGTACAAACGCAACGTTATGATCTTGAC...ATGGGAAATGTAAAGGAAGTTGCATGTTGCCTGACATGACGCTGTGCACATAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS-3UTR CAA 90 bp | TCCAGCCACACACATAGAAAATATGCAAGGCCACAGATGGCGGTCACTAGATGCATTCTGGTTTTCTGCTaGGGTATATTCATTGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: SSHTHRKYARPQMAVTRCILVFC*GIFIAE Trigger: TTCAGCAATGAATATACCCAAGCAGAAAACCAGAAT...GCATCTAGTGACCGCCATCTGTGGCCTTGCATATTTTCTATGTGTGTGGCTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS-3UTR CAA 90 bp | TGCACAGCGTCATGTCAGGCAACATGCAACTTCCTTTACATTTCCCATGTGAAAATCATAACGTTGCGTTaGTACATGGGAATGCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: CTASCQATCNFLYISHVKIITLR*YMGMPS Trigger: AGATGGCATTCCCATGTACAAACGCAACGTTATGAT...TTTCACATGGGAAATGTAAAGGAAGTTGCATGTTGCCTGACATGACGCTGTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS GCA 72 bp | CTTGGATTCTGCAGACTTGTCCTTGGAAGCCACTGCTaGTGGGGCGTGTCTGTTCCCCGCAGGGTTGTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: LGFCRLVLGSHC*WGVSVPRRVVH Trigger: GTGCACAACCCTGCGGGGAACAGACACGCCCCAGCAGCAGTGGCTTCCAAGGACAAGTCTGCAGAATCCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS GCA 72 bp | TTCCGGTACTGTGCCCCCTCTGAACCTGCCACTGGCTaGTTCTCCTTAGGCAGCATCTGCATGTACTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: FRYCAPSEPATG*FSLGSICMYCL Trigger: CAGGCAGTACATGCAGATGCTGCCTAAGGAGAAGCAGCCAGTGGCAGGTTCAGAGGGGGCACAGTACCGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 ENSMUST00000154266.3 |
||
| CDS GCA 72 bp | CTTCTTGGATTCTGCAGACTTGTCCTTGGAAGCCACTaGTGCTGGGGCGTGTCTGTTCCCCGCAGGGTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LLGFCRLVLGSH*CWGVSVPRRVV Trigger: CACAACCCTGCGGGGAACAGACACGCCCCAGCAGCAGTGGCTTCCAAGGACAAGTCTGCAGAATCCAAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS TCA 72 bp | GGAGACAACTCATGGCACTTAGAAGGATCCTGGTCATaGGCCGGGAGCTGTTTCGCCAGCTGCTTCTTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: GDNSWHLEGSWS*AGSCFASCFFR Trigger: CCGGAAGAAGCAGCTGGCGAAACAGCTCCCGGCTCATGACCAGGATCCTTCTAAGTGCCATGAGTTGTCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS CCA 72 bp | GCCAGAGCTTATCGTAGCCAGCCCTTTCAGCATAGATaGCCGGCTCGCCTTCGTTCATGGTGTGTTTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: ARAYRSQPFQHR*PARLRSWCVCS Trigger: GCTGCAAACACACCATGAACGAAGGCGAGCCGGCCATCTATGCTGAAAGGGCTGGCTACGATAAGCTCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS TCA 72 bp | TGTCTGTTCCCCGCAGGGTTGTGCACCTTGTCACCCTaGGCATTCATCTCAGAGGGAAACTTCACGTCACCC | + |
|
Preference number: 6 (lower is better) Translates to: CLFPAGLCTLSP*AFISEGNFTSP Trigger: GGGTGACGTGAAGTTTCCCTCTGAGATGAATGCTCAGGGTGACAAGGTGCACAACCCTGCGGGGAACAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS CCA 72 bp | AATACTGGGTCTTCTTGGATTCTGCAGACTTGTCCTTaGAAGCCACTGCTGCTGGGGCGTGTCTGTTCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: NTGSSWILQTCP*KPLLLGRVCSP Trigger: CGGGGAACAGACACGCCCCAGCAGCAGTGGCTTCCAAGGACAAGTCTGCAGAATCCAAGAAGACCCAGTATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS CAA 90 bp | CAGCAAGAGCACAGGAAACACTCTGTGGATGCGTGCCAGCTGAAGTaGTTGTACGTTACTCGCTGCACTTCCGGGTCGATGGCATTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: QQEHRKHSVDACQLK*LYVTRCTSGSMALW Trigger: CCACAATGCCATCGACCCGGAAGTGCAGCGAGTAACGTACAACAACTTCAGCTGGCACGCATCCACAGAGTGTTTCCTGTGCTCTTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS GCA 72 bp | GCAGCAGTAACAGGAATACTGGGTCTTCTTGGATTCTaGAGACTTGTCCTTGGAAGCCACTGCTGCTGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: AAVTGILGLLGF*RLVLGSHCCWG Trigger: GCCCCAGCAGCAGTGGCTTCCAAGGACAAGTCTGCAGAATCCAAGAAGACCCAGTATTCCTGTTACTGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS CCA 72 bp | CTGCATGTACTGCCTGGCCAGAGCCTGGTTTTGAACTaGGGGAGCCCACTCATAGGTAACTGTGTTGATGGA | + |
|
Preference number: 6 (lower is better) Translates to: LHVLPGQSLVLN*GSPLIGNCVDG Trigger: TCCATCAACACAGTTACCTATGAGTGGGCTCCCCCAGTTCAAAACCAGGCTCTGGCCAGGCAGTACATGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 ENSMUST00000154266.3 |
||
| CDS CAA 72 bp | CACAGGAAACACTCTGTGGATGCGTGCCAGCTGAAGTaGTTGTACGTTACTCGCTGCACTTCCGGGTCGATG | + |
|
Preference number: 6 (lower is better) Translates to: HRKHSVDACQLK*LYVTRCTSGSM Trigger: CATCGACCCGGAAGTGCAGCGAGTAACGTACAACAACTTCAGCTGGCACGCATCCACAGAGTGTTTCCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS CAA 90 bp | CAAGAGCACAGGAAACACTCTGTGGATGCGTGCCAGCTGAAGTTGTaGTACGTTACTCGCTGCACTTCCGGGTCGATGGCATTGTGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: QEHRKHSVDACQLKL*YVTRCTSGSMALWH Trigger: ATGCCACAATGCCATCGACCCGGAAGTGCAGCGAGTAACGTACAACAACTTCAGCTGGCACGCATCCACAGAGTGTTTCCTGTGCTCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS TCA 72 bp | AAGAGCACAGGAAACACTCTGTGGATGCGTGCCAGCTaGAGTTGTTGTACGTTACTCGCTGCACTTCCGGGT | + |
|
Preference number: 6 (lower is better) Translates to: KSTGNTLWMRAS*SCCTLLAALPG Trigger: ACCCGGAAGTGCAGCGAGTAACGTACAACAACTTCAGCTGGCACGCATCCACAGAGTGTTTCCTGTGCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS GCA 72 bp | CCTCAAAGAGTCTCCCCACTTTCCGGTCCTCCTCATTaGTCAGGAGGACGTCATGCTCTTCTTGACCACATT | + |
|
Preference number: 6 (lower is better) Translates to: PQRVSPLSGPPH*SGGRHALLDHI Trigger: AATGTGGTCAAGAAGAGCATGACGTCCTCCTGAGCAATGAGGAGGACCGGAAAGTGGGGAGACTCTTTGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS CCA 72 bp | CCCTTTCAGCATAGATGGCCGGCTCGCCTTCGTTCATaGTGTGTTTGCAGCAGTAACAGGAATACTGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: PFQHRWPARLRS*CVCSSNRNTGS Trigger: AGACCCAGTATTCCTGTTACTGCTGCAAACACACCATGAACGAAGGCGAGCCGGCCATCTATGCTGAAAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS CCA 72 bp | AGTTGTTGTACGTTACTCGCTGCACTTCCGGGTCGATaGCATTGTGGCATCCTTGACACACCACAGCATGGT | + |
|
Preference number: 6 (lower is better) Translates to: SCCTLLAALPGR*HCGILDTPQHG Trigger: ACCATGCTGTGGTGTGTCAAGGATGCCACAATGCCATCGACCCGGAAGTGCAGCGAGTAACGTACAACAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS GCA 72 bp | GAACAGAAAACCATCCCTTCTACGGGCATGAACTTCTaGCCGATAAGACACTTGCTGCAGCAAGAGCACAGG | + |
|
Preference number: 6 (lower is better) Translates to: EQKTIPSTGMNF*PIRHLLQQEHR Trigger: CCTGTGCTCTTGCTGCAGCAAGTGTCTTATCGGGCAGAAGTTCATGCCCGTAGAAGGGATGGTTTTCTGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS TCA 72 bp | GCCAATTCTGGTTTTCTGCTTGGGTATATTCATTGCTaGATATCAGCTCGTCACAGCCAGCACAGCGGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: ANSGFLLGYIHC*ISARHSQHSGA Trigger: AGCCCCGCTGTGCTGGCTGTGACGAGCTGATATTCAGCAATGAATATACCCAAGCAGAAAACCAGAATTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS TCA 72 bp | TCTTCACATAGCAGGGCTTGCACACAGGCTTGTCAGTaGCCATCACGTAGATTTTCCCTGCTAGGATGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: SSHSRACTQACQ*PSRRFSLLGCG Trigger: ACCACATCCTAGCAGGGAAAATCTACGTGATGGTCACTGACAAGCCTGTGTGCAAGCCCTGCTATGTGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS GCA 72 bp | CATAGATGGCCGGCTCGCCTTCGTTCATGGTGTGTTTaGAGCAGTAACAGGAATACTGGGTCTTCTTGGATT | + |
|
Preference number: 6 (lower is better) Translates to: HRWPARLRSWCV*SSNRNTGSSWI Trigger: AATCCAAGAAGACCCAGTATTCCTGTTACTGCTGCAAACACACCATGAACGAAGGCGAGCCGGCCATCTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS CAA 72 bp | GCAGCCACTGGATTGGTCAAGATCATAACGTTGCGTTaGTACATGGGAATGCCATCTGACTTCAGCTTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: AATGLVKIITLR*YMGMPSDFSLA Trigger: CGCCAAGCTGAAGTCAGATGGCATTCCCATGTACAAACGCAACGTTATGATCTTGACCAATCCAGTGGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS CAA 90 bp | ATCATAACGTTGCGTTTGTACATGGGAATGCCATCTGACTTCAGCTaGGCGATCAGGGTGGTGTACTTAGTGTCCTCAAAGAGTCTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: IITLRLYMGMPSDFS*AIRVVYLVSSKSLP Trigger: GGGGAGACTCTTTGAGGACACTAAGTACACCACCCTGATCGCCAAGCTGAAGTCAGATGGCATTCCCATGTACAAACGCAACGTTATGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS CAA 72 bp | AGGTGCCAATTCTGGTTTTCTGCTTGGGTATATTCATaGCTGAATATCAGCTCGTCACAGCCAGCACAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: RCQFWFSAWVYS*LNISSSQPAQR Trigger: CCGCTGTGCTGGCTGTGACGAGCTGATATTCAGCAATGAATATACCCAAGCAGAAAACCAGAATTGGCACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS TCA 72 bp | TCCTCCTCATTGCTCAGGAGGACGTCATGCTCTTCTTaGCCACATTTGCAGTTACGACATATTTTCCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SSSLLRRTSCSS*PHLQLRHIFLQ Trigger: CTGGAGGAAAATATGTCGTAACTGCAAATGTGGTCAAGAAGAGCATGACGTCCTCCTGAGCAATGAGGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
||
| CDS TCA 72 bp | GATCATAACGTTGCGTTTGTACATGGGAATGCCATCTaGCTTCAGCTTGGCGATCAGGGTGGTGTACTTAGT | + |
|
Preference number: 6 (lower is better) Translates to: DHNVAFVHGNAI*LQLGDQGGVLS Trigger: ACTAAGTACACCACCCTGATCGCCAAGCTGAAGTCAGATGGCATTCCCATGTACAAACGCAACGTTATGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS CAA 72 bp | GTCCTCCTCATTGCTCAGGAGGACGTCATGCTCTTCTaGACCACATTTGCAGTTACGACATATTTTCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: VLLIAQEDVMLF*TTFAVTTYFPP Trigger: TGGAGGAAAATATGTCGTAACTGCAAATGTGGTCAAGAAGAGCATGACGTCCTCCTGAGCAATGAGGAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS CAA 72 bp | TTCTTGGCAGCCACTGGATTGGTCAAGATCATAACGTaGCGTTTGTACATGGGAATGCCATCTGACTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: FLAATGLVKIIT*RLYMGMPSDFS Trigger: GCTGAAGTCAGATGGCATTCCCATGTACAAACGCAACGTTATGATCTTGACCAATCCAGTGGCTGCCAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS CAA 72 bp | GTGTTGATGGAGACGTTCTTCTTGGCAGCCACTGGATaGGTCAAGATCATAACGTTGCGTTTGTACATGGGA | + |
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Preference number: 6 (lower is better) Translates to: VLMETFFLAATG*VKIITLRLYMG Trigger: TCCCATGTACAAACGCAACGTTATGATCTTGACCAATCCAGTGGCTGCCAAGAAGAACGTCTCCATCAACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS GCA 72 bp | TGCTCAGGAGGACGTCATGCTCTTCTTGACCACATTTaGAGTTACGACATATTTTCCTCCAGAAGTGTAGTT | + |
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Preference number: 6 (lower is better) Translates to: CSGGRHALLDHI*SYDIFSSRSVV Trigger: AACTACACTTCTGGAGGAAAATATGTCGTAACTGCAAATGTGGTCAAGAAGAGCATGACGTCCTCCTGAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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| CDS CCA 72 bp | AACTGTGTTGATGGAGACGTTCTTCTTGGCAGCCACTaGATTGGTCAAGATCATAACGTTGCGTTTGTACAT | + |
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Preference number: 6 (lower is better) Translates to: NCVDGDVLLGSH*IGQDHNVAFVH Trigger: ATGTACAAACGCAACGTTATGATCTTGACCAATCCAGTGGCTGCCAAGAAGAACGTCTCCATCAACACAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 ENSMUST00000154266.3 |
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| CDS CAA 72 bp | CTCCAGAAGTGTAGTTCAAATCCTTCACAGTTCTCTTaGCATTTTAGACAGGGGGCTCCAAATCCTTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: LQKCSSNPSQFS*HFRQGAPNPCS Trigger: TGAGCAAGGATTTGGAGCCCCCTGTCTAAAATGCAAAGAGAACTGTGAAGGATTTGAACTACACTTCTGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076654.9 ENSMUST00000115467.11 |
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