Pregenerated sensors for TERF2IP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033430Ensembl transcript IDs: ENSMUST00000052138.11
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAAGCCAGGGAAAGCAATCCAGGAACCAGCACCTTCCATGGCCTCTaGATCAGTTCCTGCCTCCAGGTTCCTGCCCTGTGTGAGGTCCAG | + |
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Preference number: 1 (lower is better) Translates to: QARESNPGTSTFHGL*ISSCLQVPALCEVQ Trigger: CTGGACCTCACACAGGGCAGGAACCTGGAGGCAGGAACTGATGCAGAGGCCATGGAAGGTGCTGGTTCCTGGATTGCTTTCCCTGGCTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR CCA 90 bp | CACTGGCCACTGGTGCTGACACGATCGCCTGCTGGTCGGTGTCAATaGTCACAGGTGCTTACATCATCACCTATCTTTTCCATCCTCTTG | + |
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Preference number: 1 (lower is better) Translates to: HWPLVLTRSPAGRCQ*SQVLTSSPIFSILL Trigger: CAAGAGGATGGAAAAGATAGGTGATGATGTAAGCACCTGTGACCATTGACACCGACCAGCAGGCGATCGTGTCAGCACCAGTGGCCAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR TCA 90 bp | GTGAAGTTTGAGTGTCCAGACTGCTGGAGATGGGGCTCACACCTGTaGCACACCTCTGGCTTGCTTCTCTTCAACTCGCAGAATTTCAAC | + |
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Preference number: 1 (lower is better) Translates to: VKFECPDCWRWGSHL*HTSGLLLFNSQNFN Trigger: GTTGAAATTCTGCGAGTTGAAGAGAAGCAAGCCAGAGGTGTGTCACAGGTGTGAGCCCCATCTCCAGCAGTCTGGACACTCAAACTTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR TCA 90 bp | CAACCTGACACAAGCTGGAGTTTTCACAGGGAAAGGAGCCTCCTTTaGGGAAACGGCTTCACGAGATCCAGCTGTAAGGCATTTTCTCAA | + |
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Preference number: 1 (lower is better) Translates to: QPDTSWSFHRERSLL*GNGFTRSSCKAFSQ Trigger: TTGAGAAAATGCCTTACAGCTGGATCTCGTGAAGCCGTTTCCTCAAAGGAGGCTCCTTTCCCTGTGAAAACTCCAGCTTGTGTCAGGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR CCA 90 bp | CACCAAGTCAAATGCCCTTTCATTTCCAACTTTGACTTTGTCACTTaGCTCCTGGCACCTGTACAACGGGGGACACAGTCCATCCAAAAA | + |
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Preference number: 1 (lower is better) Translates to: HQVKCPFISNFDFVT*LLAPVQRGTQSIQK Trigger: TTTTTGGATGGACTGTGTCCCCCGTTGTACAGGTGCCAGGAGCCAAGTGACAAAGTCAAAGTTGGAAATGAAAGGGCATTTGACTTGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR TCA 90 bp | CAACTTGCTTCTTGGTCATGGTGTTTTGTGCAGGTATACAAACCCTaGCTGAGACACATCCTCCCTTCACTCCACCTAGAGGATCATCTT | + |
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Preference number: 1 (lower is better) Translates to: QLASWSWCFVQVYKP*LRHILPSLHLEDHL Trigger: AAGATGATCCTCTAGGTGGAGTGAAGGGAGGATGTGTCTCAGTCAGGGTTTGTATACCTGCACAAAACACCATGACCAAGAAGCAAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR TCA 90 bp | GAAACGGCTTCACGAGATCCAGCTGTAAGGCATTTTCTCAATTATTaGTCAAAGGGGGAGGGCTGTTGGGTGGTTTGGGTTCTACAAGAA | + |
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Preference number: 1 (lower is better) Translates to: ETASRDPAVRHFLNY*SKGEGCWVVWVLQE Trigger: TTCTTGTAGAACCCAAACCACCCAACAGCCCTCCCCCTTTGATCAATAATTGAGAAAATGCCTTACAGCTGGATCTCGTGAAGCCGTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR TCA 90 bp | GTCCTGACTTCCTTTGGTGATGAACAGCAATGTGGAAGTGTAAACTaGATAAACCCTTTCCTCCCCAACTTGCTTCTTGGTCATGGTGTT | + |
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Preference number: 1 (lower is better) Translates to: VLTSFGDEQQCGSVN*INPFLPNLLLGHGV Trigger: AACACCATGACCAAGAAGCAAGTTGGGGAGGAAAGGGTTTATTCAGTTTACACTTCCACATTGCTGTTCATCACCAAAGGAAGTCAGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR GCA 90 bp | GCAACTTCTGCCAAAAGACAAGAATTATTCCCTCACCAAGTCAAATaGCCTTTCATTTCCAACTTTGACTTTGTCACTTGGCTCCTGGCA | + |
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Preference number: 1 (lower is better) Translates to: ATSAKRQELFPHQVK*PFISNFDFVTWLLA Trigger: TGCCAGGAGCCAAGTGACAAAGTCAAAGTTGGAAATGAAAGGGCATTTGACTTGGTGAGGGAATAATTCTTGTCTTTTGGCAGAAGTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR CCA 90 bp | ATGGTACAAGCTCTGCAACTAAATCGTTCTTCTAGACTCTTGGTTTaGGACCCTCCAGCTAAAGCAACTTCTGCCAAAAGACAAGAATTA | + |
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Preference number: 1 (lower is better) Translates to: MVQALQLNRSSRLLV*DPPAKATSAKRQEL Trigger: TAATTCTTGTCTTTTGGCAGAAGTTGCTTTAGCTGGAGGGTCCCAAACCAAGAGTCTAGAAGAACGATTTAGTTGCAGAGCTTGTACCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR-3UTR CCA 90 bp | GACCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCACACCGGCGGGGTCACTaGCCACTGGTGCTGACACGA | + |
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Preference number: 2 (lower is better) Translates to: DPITDGCEPPCGCWDLNSHRRGH*PLVLTR Trigger: TCGTGTCAGCACCAGTGGCCAGTGACCCCGCCGGTG...TGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR-3UTR CCA 90 bp | AGTGTCCAGACTGCTGGAGATGGGGCTCACACCTGTGACACACCTCTGGCTTGCGTTCTTCTAGACTCTTaGTTTGGGACCCTCCAGCTA | + |
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Preference number: 2 (lower is better) Translates to: SVQTAGDGAHTCDTPLACVLLDS*FGTLQL Trigger: TAGCTGGAGGGTCCCAAACCAAGAGTCTAGAAGAAC...GCAAGCCAGAGGTGTGTCACAGGTGTGAGCCCCATCTCCAGCAGTCTGGACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR-3UTR GCA 90 bp | GACCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCACTCTGCATCAGTTCCTaGCTCCAGGTTCCTGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: DPITDGCEPPCGCWDLNSLCISS*LQVPAL Trigger: CAGGGCAGGAACCTGGAGGCAGGAACTGATGCAGAG...TGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR-3UTR CCA 90 bp | CGAGTACACAGTAGCTGTCTTCAGACACACACCAGAAGTGTGCATCGGACCCCAAACCAGCACCTTCCATaGCCTCTGCATCAGTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: RVHSSCLQTHTRSVHRTPNQHLP*PLHQFL Trigger: CAGGAACTGATGCAGAGGCCATGGAAGGTGCTGGTT...TGGGGTCCGATGCACACTTCTGGTGTGTGTCTGAAGACAGCTACTGTGTACTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR-3UTR GCA 90 bp | GGAGATGGGGCTCACACCTGTGACACACCTCTGGCTTGCTTCTCTTCAACTCGCCTTTCCTCCCCAACTTaGTTCTTGGTCATGGTGTTT | + |
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Preference number: 2 (lower is better) Translates to: GDGAHTCDTPLACFSSTRLSSPT*FLVMVF Trigger: AAACACCATGACCAAGAAGCAAGTTGGGGAGGAAAG...GCGAGTTGAAGAGAAGCAAGCCAGAGGTGTGTCACAGGTGTGAGCCCCATCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR-3UTR CCA 90 bp | GGAGATGGGGCTCACACCTGTGACACACCTCTGGCTTGCTTCTCTTCAACTCGCTTTGACTTTGTCACTTaGCTCCTGGCACCTGTACAA | + |
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Preference number: 2 (lower is better) Translates to: GDGAHTCDTPLACFSSTRFDFVT*LLAPVQ Trigger: TTGTACAGGTGCCAGGAGCCAAGTGACAAAGTCAAA...GCGAGTTGAAGAGAAGCAAGCCAGAGGTGTGTCACAGGTGTGAGCCCCATCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR-3UTR CCA 90 bp | GTTTTGTGCGTCAACCTGACACAAGCTGGAGTTTTCACAGGGAAAGGAGCCTCCAAGGGGGAGGGCTGTTaGGTGGTTTGGGTTCTACAA | + |
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Preference number: 2 (lower is better) Translates to: VLCVNLTQAGVFTGKGASKGEGC*VVWVLQ Trigger: TTGTAGAACCCAAACCACCCAACAGCCCTCCCCCTT...GGAGGCTCCTTTCCCTGTGAAAACTCCAGCTTGTGTCAGGTTGACGCACAAAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR-3UTR TCA 90 bp | CGAGTACACAGTAGCTGTCTTCAGACACACACCAGAAGTGTGCATCGGACCCCATATACAAACCCTGACTaGGACACATCCTCCCTTCAC | + |
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Preference number: 2 (lower is better) Translates to: RVHSSCLQTHTRSVHRTPYTNPD*DTSSLH Trigger: GTGAAGGGAGGATGTGTCTCAGTCAGGGTTTGTATA...TGGGGTCCGATGCACACTTCTGGTGTGTGTCTGAAGACAGCTACTGTGTACTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR-3UTR CCA 90 bp | TCCTCCCCAACTTGCTTCTTGGTCATGGTGTTTTGTGCAGGTATACAAACCCTGTTGTCACTTGGCTCCTaGCACCTGTACAACGGGGGA | + |
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Preference number: 2 (lower is better) Translates to: SSPTCFLVMVFCAGIQTLLSLGS*HLYNGG Trigger: TCCCCCGTTGTACAGGTGCCAGGAGCCAAGTGACAA...CAGGGTTTGTATACCTGCACAAAACACCATGACCAAGAAGCAAGTTGGGGAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR-3UTR CCA 90 bp | GGAGATGGGGCTCACACCTGTGACACACCTCTGGCTTGCTTCTCTTCAACTCGCAACAACACAGCAAAGTaGACCAAGGCCACTCAATTT | + |
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Preference number: 2 (lower is better) Translates to: GDGAHTCDTPLACFSSTRNNTAK*TKATQF Trigger: AAATTGAGTGGCCTTGGTCCACTTTGCTGTGTTGTT...GCGAGTTGAAGAGAAGCAAGCCAGAGGTGTGTCACAGGTGTGAGCCCCATCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR-3UTR CCA 90 bp | GACCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGGGATGGGATAGTTTaGGAGTCATGGTACAAGCTC | + |
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Preference number: 2 (lower is better) Translates to: DPITDGCEPPCGCWDLNSGDGIV*ESWYKL Trigger: GAGCTTGTACCATGACTCCCAAACTATCCCATCCCC...TGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR CAA 90 bp | GGAAACGGCTTCACGAGATCCAGCTGTAAGGCATTTTCTCAATTATaGATCAAAGGGGGAGGGCTGTTGGGTGGTTTGGGTTCTACAAGA | + |
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Preference number: 2 (lower is better) Translates to: GNGFTRSSCKAFSQL*IKGGGLLGGLGSTR Trigger: TCTTGTAGAACCCAAACCACCCAACAGCCCTCCCCCTTTGATCAATAATTGAGAAAATGCCTTACAGCTGGATCTCGTGAAGCCGTTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR CAA 90 bp | GGAGTCATGGTACAAGCTCTGCAACTAAATCGTTCTTCTAGACTCTaGGTTTGGGACCCTCCAGCTAAAGCAACTTCTGCCAAAAGACAA | + |
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Preference number: 2 (lower is better) Translates to: GVMVQALQLNRSSRL*VWDPPAKATSAKRQ Trigger: TTGTCTTTTGGCAGAAGTTGCTTTAGCTGGAGGGTCCCAAACCAAGAGTCTAGAAGAACGATTTAGTTGCAGAGCTTGTACCATGACTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR-3UTR CCA 90 bp | TACATTACTGACGTGTGTCACATGCCTAAAACATCCTCAGAAAAGGGCTCAGGTCTTGCTTCTTGGTCATaGTGTTTTGTGCAGGTATAC | + |
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Preference number: 2 (lower is better) Translates to: YITDVCHMPKTSSEKGSGLASWS*CFVQVY Trigger: GTATACCTGCACAAAACACCATGACCAAGAAGCAAG...ACCTGAGCCCTTTTCTGAGGATGTTTTAGGCATGTGACACACGTCAGTAATGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR-3UTR GCA 90 bp | TTGGTTTGGGACCCTCCAGCTAAAGCAACTTCTGCCAAAAGACAAGAATTATTCCCTCACCAAGTCAAATaGCCTTTCATTTCCAACTTT | + |
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Preference number: 2 (lower is better) Translates to: LVWDPPAKATSAKRQELFPHQVK*PFISNF Trigger: AAAGTTGGAAATGAAAGGGCATTTGACTTGGTGAGG...GAATAATTCTTGTCTTTTGGCAGAAGTTGCTTTAGCTGGAGGGTCCCAAACCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR-3UTR TCA 90 bp | GAGATTTCAAAGATTTATAGCAAGATGACTATGGGGTTTTTCAACTCAGTCAACCAGTCCATCCAAAAATaGCTAGTACACAGACCAACC | + |
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Preference number: 2 (lower is better) Translates to: EISKIYSKMTMGFFNSVNQSIQK*LVHRPT Trigger: GGTTGGTCTGTGTACTAGTCATTTTTGGATGGACTG...GTTGACTGAGTTGAAAAACCCCATAGTCATCTTGCTATAAATCTTTGAAATCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR CCA 72 bp | TACACTGCGTGGCTACAGCAGCACCGGCGGGGTCACTaGCCACTGGTGCTGACACGATCGCCTGCTGGTCGG | + |
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Preference number: 3 (lower is better) Translates to: YTAWLQQHRRGH*PLVLTRSPAGR Trigger: CCGACCAGCAGGCGATCGTGTCAGCACCAGTGGCCAGTGACCCCGCCGGTGCTGCTGTAGCCACGCAGTGTA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR GCA 72 bp | GCGGGGTCACTGGCCACTGGTGCTGACACGATCGCCTaGTGGTCGGTGTCAATGGTCACAGGTGCTTACATC | + |
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Preference number: 3 (lower is better) Translates to: AGSLATGADTIA*WSVSMVTGAYI Trigger: GATGTAAGCACCTGTGACCATTGACACCGACCAGCAGGCGATCGTGTCAGCACCAGTGGCCAGTGACCCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR CCA 72 bp | AGCCAGGGAAAGCAATCCAGGAACCAGCACCTTCCATaGCCTCTGCATCAGTTCCTGCCTCCAGGTTCCTGC | + |
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Preference number: 3 (lower is better) Translates to: SQGKQSRNQHLP*PLHQFLPPGSC Trigger: GCAGGAACCTGGAGGCAGGAACTGATGCAGAGGCCATGGAAGGTGCTGGTTCCTGGATTGCTTTCCCTGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR TCA 72 bp | GAGTGTCCAGACTGCTGGAGATGGGGCTCACACCTGTaGCACACCTCTGGCTTGCTTCTCTTCAACTCGCAG | + |
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Preference number: 3 (lower is better) Translates to: ECPDCWRWGSHL*HTSGLLLFNSQ Trigger: CTGCGAGTTGAAGAGAAGCAAGCCAGAGGTGTGTCACAGGTGTGAGCCCCATCTCCAGCAGTCTGGACACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR GCA 72 bp | GAAAGCAATCCAGGAACCAGCACCTTCCATGGCCTCTaGATCAGTTCCTGCCTCCAGGTTCCTGCCCTGTGT | + |
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Preference number: 3 (lower is better) Translates to: ESNPGTSTFHGL*ISSCLQVPALC Trigger: ACACAGGGCAGGAACCTGGAGGCAGGAACTGATGCAGAGGCCATGGAAGGTGCTGGTTCCTGGATTGCTTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR TCA 72 bp | TGCCTCCAGGTTCCTGCCCTGTGTGAGGTCCAGTCCTaGCTTCCTTTGGTGATGAACAGCAATGTGGAAGTG | + |
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Preference number: 3 (lower is better) Translates to: CLQVPALCEVQS*LPLVMNSNVEV Trigger: CACTTCCACATTGCTGTTCATCACCAAAGGAAGTCAGGACTGGACCTCACACAGGGCAGGAACCTGGAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR GCA 72 bp | GACCCCATTACAGATGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTCAGGACCTCTGGAAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: DPITDGCEPPCG*WDLNSGPLEEQ Trigger: CTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR CCA 72 bp | CTGCTGGAGATGGGGCTCACACCTGTGACACACCTCTaGCTTGCTTCTCTTCAACTCGCAGAATTTCAACTG | + |
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Preference number: 3 (lower is better) Translates to: LLEMGLTPVTHL*LASLQLAEFQL Trigger: CAGTTGAAATTCTGCGAGTTGAAGAGAAGCAAGCCAGAGGTGTGTCACAGGTGTGAGCCCCATCTCCAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR TCA 72 bp | GCTGTTGGGTGGTTTGGGTTCTACAAGAAGAAAAGCTaGGCAAGCCAGGGAAAGCAATCCAGGAACCAGCAC | + |
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Preference number: 3 (lower is better) Translates to: AVGWFGFYKKKS*ASQGKQSRNQH Trigger: GTGCTGGTTCCTGGATTGCTTTCCCTGGCTTGCTCAGCTTTTCTTCTTGTAGAACCCAAACCACCCAACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR TCA 72 bp | ACAAGCTGGAGTTTTCACAGGGAAAGGAGCCTCCTTTaGGGAAACGGCTTCACGAGATCCAGCTGTAAGGCA | + |
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Preference number: 3 (lower is better) Translates to: TSWSFHRERSLL*GNGFTRSSCKA Trigger: TGCCTTACAGCTGGATCTCGTGAAGCCGTTTCCTCAAAGGAGGCTCCTTTCCCTGTGAAAACTCCAGCTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR TCA 72 bp | GACACGTATCAGATTCCTGTTGGTGAGTGTGAAGTTTaGGTGTCCAGACTGCTGGAGATGGGGCTCACACCT | + |
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Preference number: 3 (lower is better) Translates to: DTYQIPVGECEV*VSRLLEMGLTP Trigger: AGGTGTGAGCCCCATCTCCAGCAGTCTGGACACTCAAACTTCACACTCACCAACAGGAATCTGATACGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR GCA 72 bp | CACGATCGCCTGCTGGTCGGTGTCAATGGTCACAGGTaGTTACATCATCACCTATCTTTTCCATCCTCTTGT | + |
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Preference number: 3 (lower is better) Translates to: HDRLLVGVNGHR*LHHHLSFPSSC Trigger: ACAAGAGGATGGAAAAGATAGGTGATGATGTAAGCACCTGTGACCATTGACACCGACCAGCAGGCGATCGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR GCA 72 bp | TGGACGGCTCTAATTCCAGTGTCTTTTGTTTTATCCTaGTACATTACACTGCGTGGCTACAGCAGCACCGGC | + |
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Preference number: 3 (lower is better) Translates to: WTALIPVSFVLS*YITLRGYSSTG Trigger: GCCGGTGCTGCTGTAGCCACGCAGTGTAATGTAGCAGGATAAAACAAAAGACACTGGAATTAGAGCCGTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR GCA 72 bp | GGAGATGGGGCTCACACCTGTGACACACCTCTGGCTTaGTTCTCTTCAACTCGCAGAATTTCAACTGATTCT | + |
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Preference number: 3 (lower is better) Translates to: GDGAHTCDTPLA*FSSTRRISTDS Trigger: AGAATCAGTTGAAATTCTGCGAGTTGAAGAGAAGCAAGCCAGAGGTGTGTCACAGGTGTGAGCCCCATCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR CCA 72 bp | AAATGCCCTTTCATTTCCAACTTTGACTTTGTCACTTaGCTCCTGGCACCTGTACAACGGGGGACACAGTCC | + |
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Preference number: 3 (lower is better) Translates to: KCPFISNFDFVT*LLAPVQRGTQS Trigger: GGACTGTGTCCCCCGTTGTACAGGTGCCAGGAGCCAAGTGACAAAGTCAAAGTTGGAAATGAAAGGGCATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR TCA 72 bp | CCCTCACCAAGTCAAATGCCCTTTCATTTCCAACTTTaGCTTTGTCACTTGGCTCCTGGCACCTGTACAACG | + |
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Preference number: 3 (lower is better) Translates to: PSPSQMPFHFQL*LCHLAPGTCTT Trigger: CGTTGTACAGGTGCCAGGAGCCAAGTGACAAAGTCAAAGTTGGAAATGAAAGGGCATTTGACTTGGTGAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR TCA 72 bp | TCTTGGTCATGGTGTTTTGTGCAGGTATACAAACCCTaGCTGAGACACATCCTCCCTTCACTCCACCTAGAG | + |
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Preference number: 3 (lower is better) Translates to: SWSWCFVQVYKP*LRHILPSLHLE Trigger: CTCTAGGTGGAGTGAAGGGAGGATGTGTCTCAGTCAGGGTTTGTATACCTGCACAAAACACCATGACCAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR-3UTR CAA 90 bp | CGAGTACACAGTAGCTGTCTTCAGACACACACCAGAAGTGTGCATCGGACCCCACAAAGAAAATGCTTGTaGACAAGACTCAACACAAAG | + |
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Preference number: 3 (lower is better) Translates to: RVHSSCLQTHTRSVHRTPQRKCL*TRLNTK Trigger: CTTTGTGTTGAGTCTTGTCAACAAGCATTTTCTTTG...TGGGGTCCGATGCACACTTCTGGTGTGTGTCTGAAGACAGCTACTGTGTACTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR TCA 72 bp | TCACGAGATCCAGCTGTAAGGCATTTTCTCAATTATTaGTCAAAGGGGGAGGGCTGTTGGGTGGTTTGGGTT | + |
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Preference number: 3 (lower is better) Translates to: SRDPAVRHFLNY*SKGEGCWVVWV Trigger: AACCCAAACCACCCAACAGCCCTCCCCCTTTGATCAATAATTGAGAAAATGCCTTACAGCTGGATCTCGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR TCA 72 bp | AGGACCTCTGGAAGAGCAGACAGTGCTCTTAACCACTaGGCCATCTCTCCAGCCCTTAAGACAGTTAATTTT | + |
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Preference number: 3 (lower is better) Translates to: RTSGRADSALNH*AISPALKTVNF Trigger: AAAATTAACTGTCTTAAGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGTCTGCTCTTCCAGAGGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR-3UTR CAA 90 bp | CCAACTTGCTTCTTGGTCATGGTGTTTTGTGCAGGTATACAAACCCTGACTGAGCTTTCATTTCCAACTTaGACTTTGTCACTTGGCTCC | + |
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Preference number: 3 (lower is better) Translates to: PTCFLVMVFCAGIQTLTELSFPT*TLSLGS Trigger: GGAGCCAAGTGACAAAGTCAAAGTTGGAAATGAAAG...CTCAGTCAGGGTTTGTATACCTGCACAAAACACCATGACCAAGAAGCAAGTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR TCA 72 bp | TCCTTTGGTGATGAACAGCAATGTGGAAGTGTAAACTaGATAAACCCTTTCCTCCCCAACTTGCTTCTTGGT | + |
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Preference number: 3 (lower is better) Translates to: SFGDEQQCGSVN*INPFLPNLLLG Trigger: ACCAAGAAGCAAGTTGGGGAGGAAAGGGTTTATTCAGTTTACACTTCCACATTGCTGTTCATCACCAAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| 3UTR-3UTR CAA 90 bp | GAGATTTCAAAGATTTATAGCAAGATGACTATGGGGTTTTTCAACTCAGTCAACCGTTCTTCTAGACTCTaGGTTTGGGACCCTCCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: EISKIYSKMTMGFFNSVNRSSRL*VWDPPA Trigger: AGCTGGAGGGTCCCAAACCAAGAGTCTAGAAGAACG...GTTGACTGAGTTGAAAAACCCCATAGTCATCTTGCTATAAATCTTTGAAATCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
||
| 3UTR-3UTR CAA 90 bp | GAGATTTCAAAGATTTATAGCAAGATGACTATGGGGTTTTTCAACTCAGTCAACGGGGGATGGGATAGTTaGGGAGTCATGGTACAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: EISKIYSKMTMGFFNSVNGGWDS*GVMVQA Trigger: AGCTTGTACCATGACTCCCAAACTATCCCATCCCCC...GTTGACTGAGTTGAAAAACCCCATAGTCATCTTGCTATAAATCTTTGAAATCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
||
| 3UTR GCA 72 bp | GCCAAAAGACAAGAATTATTCCCTCACCAAGTCAAATaGCCTTTCATTTCCAACTTTGACTTTGTCACTTGG | + |
|
Preference number: 3 (lower is better) Translates to: AKRQELFPHQVK*PFISNFDFVTW Trigger: CCAAGTGACAAAGTCAAAGTTGGAAATGAAAGGGCATTTGACTTGGTGAGGGAATAATTCTTGTCTTTTGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
||
| 3UTR GCA 72 bp | AGAGTAGTGAGAATTACATTACTGACGTGTGTCACATaGCTAAAACATCCTCAGAAAAGGGCTCAGGTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: RVVRITLLTCVT*LKHPQKRAQVK Trigger: TTTAACCTGAGCCCTTTTCTGAGGATGTTTTAGGCATGTGACACACGTCAGTAATGTAATTCTCACTACTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
||
| 3UTR TCA 72 bp | AGGAAGAAGAAGAGATTTCAAAGATTTATAGCAAGATaGCTATGGGGTTTTTCAACTCAGTCAACACAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: RKKKRFQRFIAR*LWGFSTQSTQN Trigger: ATTCTGTGTTGACTGAGTTGAAAAACCCCATAGTCATCTTGCTATAAATCTTTGAAATCTCTTCTTCTTCCT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| CDS-3UTR TCA 90 bp | GGAGATGGGGCTCACACCTGTGACACACCTCTGGCTTGCTTCTCTTCAACTCGCCGCCGCCGTGCAGGATaGGCGTCGACAGCCGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: GDGAHTCDTPLACFSSTRRRRAG*ASTAGA Trigger: AGCGCCGGCTGTCGACGCTCATCCTGCACGGCGGCG...GCGAGTTGAAGAGAAGCAAGCCAGAGGTGTGTCACAGGTGTGAGCCCCATCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
||
| CDS-3UTR GCA 90 bp | AGTGTCCAGACTGCTGGAGATGGGGCTCACACCTGTGACACACCTCTGGCTTGCGACTGCCAGGAGTGCTaGGTGAGCGAGCTCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SVQTAGDGAHTCDTPLACDCQEC*VSELFS Trigger: GGAGAAGAGCTCGCTCACGCAGCACTCCTGGCAGTC...GCAAGCCAGAGGTGTGTCACAGGTGTGAGCCCCATCTCCAGCAGTCTGGACACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
||
| CDS-3UTR CCA 90 bp | GGAGATGGGGCTCACACCTGTGACACACCTCTGGCTTGCTTCTCTTCAACTCGCCGCTCTCTTGTTCTGTaGCTCTCCGCTATCCGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: GDGAHTCDTPLACFSSTRRSLVL*LSAIRG Trigger: GCCGCGGATAGCGGAGAGCCACAGAACAAGAGAGCG...GCGAGTTGAAGAGAAGCAAGCCAGAGGTGTGTCACAGGTGTGAGCCCCATCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
||
| CDS-3UTR TCA 90 bp | GGAGATGGGGCTCACACCTGTGACACACCTCTGGCTTGCTTCTCTTCAACTCGCGTCTGGCTGTGTTTCTaGGTCTTCCTCGGGTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GDGAHTCDTPLACFSSTRVWLCF*VFLGCG Trigger: CCCACACCCGAGGAAGACTCAGAAACACAGCCAGAC...GCGAGTTGAAGAGAAGCAAGCCAGAGGTGTGTCACAGGTGTGAGCCCCATCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
||
| CDS-3UTR GCA 90 bp | AGTGTCCAGACTGCTGGAGATGGGGCTCACACCTGTGACACACCTCTGGCTTGCGGTCCAGCTTCTCGTTaGGATCCACGCAGTCTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SVQTAGDGAHTCDTPLACGPASR*DPRSLG Trigger: TCCTAGACTGCGTGGATCGCAACGAGAAGCTGGACC...GCAAGCCAGAGGTGTGTCACAGGTGTGAGCCCCATCTCCAGCAGTCTGGACACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
||
| CDS-3UTR CCA 90 bp | TCCTCCCCAACTTGCTTCTTGGTCATGGTGTTTTGTGCAGGTATACAAACCCTGTCGACAGCCGGCGCTTaGCCGAGCTGGGCCGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: SSPTCFLVMVFCAGIQTLSTAGA*PSWAAR Trigger: ACGTGCGGCCCAGCTCGGCCAAGCGCCGGCTGTCGA...CAGGGTTTGTATACCTGCACAAAACACCATGACCAAGAAGCAAGTTGGGGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
||
| CDS-3UTR TCA 90 bp | AAAGCTGAGCAAGCCAGGGAAAGCAATCCAGGAACCAGCACCTTCCATGGCCTCAACAGAGTGGAGGAGTaGGTGGGCCCATTGGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KAEQARESNPGTSTFHGLNRVEE*VGPLGS Trigger: AGACCCCAATGGGCCCACTCACTCCTCCACTCTGTT...GAGGCCATGGAAGGTGCTGGTTCCTGGATTGCTTTCCCTGGCTTGCTCAGCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
||
| CDS-3UTR GCA 90 bp | TACATTACTGACGTGTGTCACATGCCTAAAACATCCTCAGAAAAGGGCTCAGGTCGCCCGGTCAGGGGCTaGGGCTCCGGTTCCGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: YITDVCHMPKTSSEKGSGRPVRG*GSGSVE Trigger: CTCCACGGAACCGGAGCCGCAGCCCCTGACCGGGCG...ACCTGAGCCCTTTTCTGAGGATGTTTTAGGCATGTGACACACGTCAGTAATGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
||
| CDS-3UTR CCA 90 bp | GGATACTTGCCATGGACGGCTCTAATTCCAGTGTCTTTTGTTTTATCCTGCTACAGCGCCTCCCCGGGCTaGGCGAGAAGCACGGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: GYLPWTALIPVSFVLSCYSASPG*ARSTAP Trigger: CGGAGCCGTGCTTCTCGCCCAGCCCGGGGAGGCGCT...GTAGCAGGATAAAACAAAAGACACTGGAATTAGAGCCGTCCATGGCAAGTATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
||
| CDS-3UTR TCA 90 bp | CGAGTACACAGTAGCTGTCTTCAGACACACACCAGAAGTGTGCATCGGACCCCAAGGTACTTGTGCTCCTaGCCCCGTAGGTGCTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RVHSSCLQTHTRSVHRTPRYLCS*PRRCLR Trigger: CCTCAAGCACCTACGGGGTCAGGAGCACAAGTACCT...TGGGGTCCGATGCACACTTCTGGTGTGTGTCTGAAGACAGCTACTGTGTACTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
||
| CDS-3UTR GCA 90 bp | CCAACTTGCTTCTTGGTCATGGTGTTTTGTGCAGGTATACAAACCCTGACTGAGGCGGCCTCGGGGTCCTaGTCCGCCTTCCGTTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PTCFLVMVFCAGIQTLTEAASGS*SAFRLS Trigger: GCTCAAACGGAAGGCGGAGCAGGACCCCGAGGCCGC...CTCAGTCAGGGTTTGTATACCTGCACAAAACACCATGACCAAGAAGCAAGTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
||
| CDS-3UTR GCA 90 bp | AAAGCTGAGCAAGCCAGGGAAAGCAATCCAGGAACCAGCACCTTCCATGGCCTCCAGTCTAGGATGTACTaGGTGGAGATGAAGTCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KAEQARESNPGTSTFHGLQSRMY*VEMKSP Trigger: GGGCGACTTCATCTCCACGCAGTACATCCTAGACTG...GAGGCCATGGAAGGTGCTGGTTCCTGGATTGCTTTCCCTGGCTTGCTCAGCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
||
| CDS-3UTR TCA 90 bp | TACATTACTGACGTGTGTCACATGCCTAAAACATCCTCAGAAAAGGGCTCAGGTGCTCCGCCTTCCGTTTaGGCTTCTGGGAGGACGGGC | + |
|
Preference number: 4 (lower is better) Translates to: YITDVCHMPKTSSEKGSGAPPSV*ASGRTG Trigger: GCCCGTCCTCCCAGAAGCTCAAACGGAAGGCGGAGC...ACCTGAGCCCTTTTCTGAGGATGTTTTAGGCATGTGACACACGTCAGTAATGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
||
| CDS-3UTR TCA 90 bp | ACTGAGACACATCCTCCCTTCACTCCACCTAGAGGATCATCTTTTCAAGGCTTATGTACTGCGTGGAGATaGAGTCGCCCGAAGCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: TETHPPFTPPRGSSFQGLCTAWR*SRPKPR Trigger: CCGAGGCTTCGGGCGACTTCATCTCCACGCAGTACA...TAAGCCTTGAAAAGATGATCCTCTAGGTGGAGTGAAGGGAGGATGTGTCTCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
||
| CDS-3UTR GCA 90 bp | CTCAATTCCCATCTTAGTCACCAGAGTAGTGAGAATTACATTACTGACGTGTGTACGGCTCCGGGTTCCTaGACCCGACACACGGTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LNSHLSHQSSENYITDVCTAPGS*TRHTVP Trigger: CGGCACCGTGTGTCGGGTGCAGGAACCCGGAGCCGT...ACACACGTCAGTAATGTAATTCTCACTACTCTGGTGACTAAGATGGGAATTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| CDS-3UTR CCA 90 bp | TTGGTTTGGGACCCTCCAGCTAAAGCAACTTCTGCCAAAAGACAAGAATTATTCGGCGCTTGGCCGAGCTaGGCCGCACGTAAAACGACA | + |
|
Preference number: 4 (lower is better) Translates to: LVWDPPAKATSAKRQELFGAWPS*AARKTT Trigger: TGTCGTTTTACGTGCGGCCCAGCTCGGCCAAGCGCC...GAATAATTCTTGTCTTTTGGCAGAAGTTGCTTTAGCTGGAGGGTCCCAAACCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
||
| CDS-3UTR TCA 90 bp | GAGATTTCAAAGATTTATAGCAAGATGACTATGGGGTTTTTCAACTCAGTCAACTCTGGGAGGACGGGCTaGCCGGGGCGTTCCCGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: EISKIYSKMTMGFFNSVNSGRTG*PGRSRA Trigger: TGCTCGGGAACGCCCCGGTCAGCCCGTCCTCCCAGA...GTTGACTGAGTTGAAAAACCCCATAGTCATCTTGCTATAAATCTTTGAAATCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
||
| CDS-3UTR GCA 90 bp | AGTGTCCAGACTGCTGGAGATGGGGCTCACACCTGTGACACACCTCTGGCTTGCAAACTTTTTGACCAGTaGATTTTTCGTGTCGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: SVQTAGDGAHTCDTPLACKLFDQ*IFRVVI Trigger: GATGACGACACGAAAAATGCACTGGTCAAAAAGTTT...GCAAGCCAGAGGTGTGTCACAGGTGTGAGCCCCATCTCCAGCAGTCTGGACACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
||
| CDS-3UTR GCA 90 bp | GAGATTTCAAAGATTTATAGCAAGATGACTATGGGGTTTTTCAACTCAGTCAACACGGTGCCGCCGCCGTaGAGGATGAGCGTCGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: EISKIYSKMTMGFFNSVNTVPPP*RMSVDS Trigger: GCTGTCGACGCTCATCCTGCACGGCGGCGGCACCGT...GTTGACTGAGTTGAAAAACCCCATAGTCATCTTGCTATAAATCTTTGAAATCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
||
| 3UTR CAA 72 bp | ACCAAGTCAAATGCCCTTTCATTTCCAACTTTGACTTaGTCACTTGGCTCCTGGCACCTGTACAACGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TKSNALSFPTLT*SLGSWHLYNGG Trigger: TCCCCCGTTGTACAGGTGCCAGGAGCCAAGTGACAAAGTCAAAGTTGGAAATGAAAGGGCATTTGACTTGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
||
| 3UTR CAA 72 bp | CAATTATTGATCAAAGGGGGAGGGCTGTTGGGTGGTTaGGGTTCTACAAGAAGAAAAGCTGAGCAAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QLLIKGGGLLGG*GSTRRKAEQAR Trigger: CCTGGCTTGCTCAGCTTTTCTTCTTGTAGAACCCAAACCACCCAACAGCCCTCCCCCTTTGATCAATAATTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| CDS-3UTR TCA 90 bp | TGTTGGGTGGTTTGGGTTCTACAAGAAGAAAAGCTGAGCAAGCCAGGGAAAGCACCTCTCCATTCTCCTTaGTCTCTCCTTTCACACACT | + |
|
Preference number: 4 (lower is better) Translates to: CWVVWVLQEEKLSKPGKAPLHSP*SLLSHT Trigger: AGTGTGTGAAAGGAGAGATCAAGGAGAATGGAGAGG...TGCTTTCCCTGGCTTGCTCAGCTTTTCTTCTTGTAGAACCCAAACCACCCAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| CDS-3UTR GCA 90 bp | CGAGTACACAGTAGCTGTCTTCAGACACACACCAGAAGTGTGCATCGGACCCCATCGTCATCGTCCTTCTaGAAATCTAAGTCATCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RVHSSCLQTHTRSVHRTPSSSSF*KSKSSC Trigger: ACAAGATGACTTAGATTTGCAGAAGGACGATGACGA...TGGGGTCCGATGCACACTTCTGGTGTGTGTCTGAAGACAGCTACTGTGTACTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| CDS-3UTR CCA 90 bp | TTGGTTTGGGACCCTCCAGCTAAAGCAACTTCTGCCAAAAGACAAGAATTATTCCTCTCACGAACAGAGTaGAGGAGTGAGTGGGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LVWDPPAKATSAKRQELFLSRTE*RSEWAH Trigger: ATGGGCCCACTCACTCCTCCACTCTGTTCGTGAGAG...GAATAATTCTTGTCTTTTGGCAGAAGTTGCTTTAGCTGGAGGGTCCCAAACCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| CDS-3UTR CCA 90 bp | TTGGTTTGGGACCCTCCAGCTAAAGCAACTTCTGCCAAAAGACAAGAATTATTCAGTGAGTGGGCCCATTaGGGTCTTTACCCAGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LVWDPPAKATSAKRQELFSEWAH*GLYPDP Trigger: TGGATCTGGGTAAAGACCCCAATGGGCCCACTCACT...GAATAATTCTTGTCTTTTGGCAGAAGTTGCTTTAGCTGGAGGGTCCCAAACCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| CDS-3UTR CCA 90 bp | GACCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCATTGCGTAGAAACTTTTaGTTCTTCTTCCTCCTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: DPITDGCEPPCGCWDLNSLRRNF*FFFLLV Trigger: GACGAGGAGGAAGAAGAACCAAAAGTTTCTACGCAA...TGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
||
| 3UTR CAA 72 bp | TCCCTCACCAAGTCAAATGCCCTTTCATTTCCAACTTaGACTTTGTCACTTGGCTCCTGGCACCTGTACAAC | + |
|
Preference number: 4 (lower is better) Translates to: SLTKSNALSFPT*TLSLGSWHLYN Trigger: GTTGTACAGGTGCCAGGAGCCAAGTGACAAAGTCAAAGTTGGAAATGAAAGGGCATTTGACTTGGTGAGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
||
| 3UTR CAA 72 bp | GTACAAGCTCTGCAACTAAATCGTTCTTCTAGACTCTaGGTTTGGGACCCTCCAGCTAAAGCAACTTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VQALQLNRSSRL*VWDPPAKATSA Trigger: GGCAGAAGTTGCTTTAGCTGGAGGGTCCCAAACCAAGAGTCTAGAAGAACGATTTAGTTGCAGAGCTTGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
||
| 3UTR CAA 72 bp | TTCACGAGATCCAGCTGTAAGGCATTTTCTCAATTATaGATCAAAGGGGGAGGGCTGTTGGGTGGTTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FTRSSCKAFSQL*IKGGGLLGGLG Trigger: ACCCAAACCACCCAACAGCCCTCCCCCTTTGATCAATAATTGAGAAAATGCCTTACAGCTGGATCTCGTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
||
| CDS-3UTR GCA 90 bp | TCCTCCCCAACTTGCTTCTTGGTCATGGTGTTTTGTGCAGGTATACAAACCCTGGCAGTTCCCACTTCTTaGGTAGAAACTTTTGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSPTCFLVMVFCAGIQTLAVPTS*VETFGS Trigger: AGAACCAAAAGTTTCTACGCAAGAAGTGGGAACTGC...CAGGGTTTGTATACCTGCACAAAACACCATGACCAAGAAGCAAGTTGGGGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
||
| 3UTR CAA 72 bp | ATGACTAGTACACAGACCAACCTCTCTGGCTTAGATTaGCCTATCATAAACAGGGGATACTTGCCATGGACG | + |
|
Preference number: 4 (lower is better) Translates to: MTSTQTNLSGLD*PIINRGYLPWT Trigger: CGTCCATGGCAAGTATCCCCTGTTTATGATAGGCAAATCTAAGCCAGAGAGGTTGGTCTGTGTACTAGTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
||
| CDS-3UTR TCA 90 bp | CCAACTTGCTTCTTGGTCATGGTGTTTTGTGCAGGTATACAAACCCTGACTGAGGAGCTCCAAACTTTTTaGCCAGTGCATTTTTCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PTCFLVMVFCAGIQTLTEELQTF*PVHFSC Trigger: ACACGAAAAATGCACTGGTCAAAAAGTTTGGAGCTC...CTCAGTCAGGGTTTGTATACCTGCACAAAACACCATGACCAAGAAGCAAGTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
||
| CDS-3UTR GCA 90 bp | ACTGAGACACATCCTCCCTTCACTCCACCTAGAGGATCATCTTTTCAAGGCTTAAAACAGCTTGTTGTCTaGCTCTCCATTCTCCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: TETHPPFTPPRGSSFQGLKQLVV*LSILLD Trigger: ATCAAGGAGAATGGAGAGGCAGACAACAAGCTGTTT...TAAGCCTTGAAAAGATGATCCTCTAGGTGGAGTGAAGGGAGGATGTGTCTCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
||
| CDS-3UTR GCA 90 bp | GGATACTTGCCATGGACGGCTCTAATTCCAGTGTCTTTTGTTTTATCCTGCTACCTAAGTCATCTTGTCTaGACCAAATGGGATAACCGT | + |
|
Preference number: 4 (lower is better) Translates to: GYLPWTALIPVSFVLSCYLSHLV*TKWDNR Trigger: ACGGTTATCCCATTTGGTGCAGACAAGATGACTTAG...GTAGCAGGATAAAACAAAAGACACTGGAATTAGAGCCGTCCATGGCAAGTATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
||
| 3UTR CAA 72 bp | ACTGAGCCATCTCTCCAGCCCTTAAGACAGTTAATTTaGAACCATTTTAGAGTCCTATCAAAAAGAGTACAC | + |
|
Preference number: 4 (lower is better) Translates to: TEPSLQPLRQLI*NHFRVLSKRVH Trigger: GTGTACTCTTTTTGATAGGACTCTAAAATGGTTCAAAATTAACTGTCTTAAGGGCTGGAGAGATGGCTCAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
||
| CDS GCA 90 bp | AGCACGGCTCCGGGTTCCTGCACCCGACACACGGTGCCGCCGCCGTaGAGGATGAGCGTCGACAGCCGGCGCTTGGCCGAGCTGGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: STAPGSCTRHTVPPP*RMSVDSRRLAELGR Trigger: GCGGCCCAGCTCGGCCAAGCGCCGGCTGTCGACGCTCATCCTGCACGGCGGCGGCACCGTGTGTCGGGTGCAGGAACCCGGAGCCGTGCT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
||
| CDS CCA 90 bp | TGCGCCCGGTCAGGGGCTGCGGCTCCGGTTCCGTGGAGCCCTCGGTaGAAGCCCCGGGCTTCGGATCGGACGCCTGCTCCGTCAGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: CARSGAAAPVPWSPR*KPRASDRTPAPSGP Trigger: TGGGCCTGACGGAGCAGGCGTCCGATCCGAAGCCCGGGGCTTCCACCGAGGGCTCCACGGAACCGGAGCCGCAGCCCCTGACCGGGCGCA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
||
| CDS TCA 90 bp | CTCCGGGTTCCTGCACCCGACACACGGTGCCGCCGCCGTGCAGGATaGGCGTCGACAGCCGGCGCTTGGCCGAGCTGGGCCGCACGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: LRVPAPDTRCRRRAG*ASTAGAWPSWAARK Trigger: TTTACGTGCGGCCCAGCTCGGCCAAGCGCCGGCTGTCGACGCTCATCCTGCACGGCGGCGGCACCGTGTGTCGGGTGCAGGAACCCGGAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
||
| CDS GCA 90 bp | TCACGTAGGTCAGGATGGCCACATCTTCCGCGTCGGTGTAGGCGATaGGCCCGGTCAGGGGCTGCGGCTCCGGTTCCGTGGAGCCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: SRRSGWPHLPRRCRR*ARSGAAAPVPWSPR Trigger: CCGAGGGCTCCACGGAACCGGAGCCGCAGCCCCTGACCGGGCGCATCGCCTACACCGACGCGGAAGATGTGGCCATCCTGACCTACGTGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
||
| CDS GCA 90 bp | GCCGGCGCTTGGCCGAGCTGGGCCGCACGTAAAACGACATGGCGCTaGCGTCTTCTCTCACGAACAGAGTGGAGGAGTGAGTGGGCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: AGAWPSWAARKTTWR*RLLSRTEWRSEWAH Trigger: ATGGGCCCACTCACTCCTCCACTCTGTTCGTGAGAGAAGACGGCAGCGCCATGTCGTTTTACGTGCGGCCCAGCTCGGCCAAGCGCCGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
||
| CDS GCA 90 bp | TCCAGGTCCAGCTTCTCGTTGCGATCCACGCAGTCTAGGATGTACTaGGTGGAGATGAAGTCGCCCGAAGCCTCGGCCAGCGCCTCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: SRSSFSLRSTQSRMY*VEMKSPEASASASP Trigger: CGGGGAGGCGCTGGCCGAGGCTTCGGGCGACTTCATCTCCACGCAGTACATCCTAGACTGCGTGGATCGCAACGAGAAGCTGGACCTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
||
| CDS CCA 90 bp | TCGACAGCCGGCGCTTGGCCGAGCTGGGCCGCACGTAAAACGACATaGCGCTGCCGTCTTCTCTCACGAACAGAGTGGAGGAGTGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: STAGAWPSWAARKTT*RCRLLSRTEWRSEW Trigger: CCACTCACTCCTCCACTCTGTTCGTGAGAGAAGACGGCAGCGCCATGTCGTTTTACGTGCGGCCCAGCTCGGCCAAGCGCCGGCTGTCGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
||
| CDS-3UTR CAA 90 bp | TTGGTTTGGGACCCTCCAGCTAAAGCAACTTCTGCCAAAAGACAAGAATTATTCGTCGACAGCCGGCGCTaGGCCGAGCTGGGCCGCACG | + |
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Preference number: 5 (lower is better) Translates to: LVWDPPAKATSAKRQELFVDSRR*AELGRT Trigger: CGTGCGGCCCAGCTCGGCCAAGCGCCGGCTGTCGAC...GAATAATTCTTGTCTTTTGGCAGAAGTTGCTTTAGCTGGAGGGTCCCAAACCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| CDS-3UTR CAA 90 bp | CGAGTACACAGTAGCTGTCTTCAGACACACACCAGAAGTGTGCATCGGACCCCAAGGTCCAGCTTCTCGTaGCGATCCACGCAGTCTAGG | + |
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Preference number: 5 (lower is better) Translates to: RVHSSCLQTHTRSVHRTPRSSFS*RSTQSR Trigger: CCTAGACTGCGTGGATCGCAACGAGAAGCTGGACCT...TGGGGTCCGATGCACACTTCTGGTGTGTGTCTGAAGACAGCTACTGTGTACTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| CDS GCA 90 bp | GGCTTCTCCGAACTCCGGAGCGGCTTCCTCAAACAGCTTGTTGTCTaGCTCTCCATTCTCCTTGATCTCTCCTTTCACACACTCCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: GFSELRSGFLKQLVV*LSILLDLSFHTLLL Trigger: GAGGAGGAGTGTGTGAAAGGAGAGATCAAGGAGAATGGAGAGGCAGACAACAAGCTGTTTGAGGAAGCCGCTCCGGAGTTCGGAGAAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| CDS-3UTR CAA 90 bp | CCAACTTGCTTCTTGGTCATGGTGTTTTGTGCAGGTATACAAACCCTGACTGAGGCTTTCCACAAGGCATaGCCTGTGACCGAGCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: PTCFLVMVFCAGIQTLTEAFHKA*PVTELG Trigger: GCCCAGCTCGGTCACAGGCAATGCCTTGTGGAAAGC...CTCAGTCAGGGTTTGTATACCTGCACAAAACACCATGACCAAGAAGCAAGTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| CDS-3UTR CAA 90 bp | CGAGTACACAGTAGCTGTCTTCAGACACACACCAGAAGTGTGCATCGGACCCCAGCCTCTCCATTCTCCTaGATCTCTCCTTTCACACAC | + |
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Preference number: 5 (lower is better) Translates to: RVHSSCLQTHTRSVHRTPASPFS*ISPFTH Trigger: GTGTGTGAAAGGAGAGATCAAGGAGAATGGAGAGGC...TGGGGTCCGATGCACACTTCTGGTGTGTGTCTGAAGACAGCTACTGTGTACTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| CDS-3UTR CAA 90 bp | CGAGTACACAGTAGCTGTCTTCAGACACACACCAGAAGTGTGCATCGGACCCCATCCTCAAACAGCTTGTaGTCTGCCTCTCCATTCTCC | + |
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Preference number: 5 (lower is better) Translates to: RVHSSCLQTHTRSVHRTPSSNSL*SASPFS Trigger: GGAGAATGGAGAGGCAGACAACAAGCTGTTTGAGGA...TGGGGTCCGATGCACACTTCTGGTGTGTGTCTGAAGACAGCTACTGTGTACTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| CDS-3UTR CAA 90 bp | TCCTCCCCAACTTGCTTCTTGGTCATGGTGTTTTGTGCAGGTATACAAACCCTGGCTTCCTCAAACAGCTaGTTGTCTGCCTCTCCATTC | + |
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Preference number: 5 (lower is better) Translates to: SSPTCFLVMVFCAGIQTLASSNS*LSASPF Trigger: GAATGGAGAGGCAGACAACAAGCTGTTTGAGGAAGC...CAGGGTTTGTATACCTGCACAAAACACCATGACCAAGAAGCAAGTTGGGGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| CDS TCA 72 bp | CCTGCACCCGACACACGGTGCCGCCGCCGTGCAGGATaGGCGTCGACAGCCGGCGCTTGGCCGAGCTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: PAPDTRCRRRAG*ASTAGAWPSWA Trigger: GGCCCAGCTCGGCCAAGCGCCGGCTGTCGACGCTCATCCTGCACGGCGGCGGCACCGTGTGTCGGGTGCAGG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| CDS GCA 72 bp | CCGGGTTCCTGCACCCGACACACGGTGCCGCCGCCGTaGAGGATGAGCGTCGACAGCCGGCGCTTGGCCGAG | + |
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Preference number: 6 (lower is better) Translates to: PGSCTRHTVPPP*RMSVDSRRLAE Trigger: CTCGGCCAAGCGCCGGCTGTCGACGCTCATCCTGCACGGCGGCGGCACCGTGTGTCGGGTGCAGGAACCCGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| CDS CCA 72 bp | TCAGGGGCTGCGGCTCCGGTTCCGTGGAGCCCTCGGTaGAAGCCCCGGGCTTCGGATCGGACGCCTGCTCCG | + |
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Preference number: 6 (lower is better) Translates to: SGAAAPVPWSPR*KPRASDRTPAP Trigger: CGGAGCAGGCGTCCGATCCGAAGCCCGGGGCTTCCACCGAGGGCTCCACGGAACCGGAGCCGCAGCCCCTGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| CDS GCA 72 bp | TCAGGATGGCCACATCTTCCGCGTCGGTGTAGGCGATaGGCCCGGTCAGGGGCTGCGGCTCCGGTTCCGTGG | + |
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Preference number: 6 (lower is better) Translates to: SGWPHLPRRCRR*ARSGAAAPVPW Trigger: CCACGGAACCGGAGCCGCAGCCCCTGACCGGGCGCATCGCCTACACCGACGCGGAAGATGTGGCCATCCTGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| CDS CCA 72 bp | GGCGCTTGGCCGAGCTGGGCCGCACGTAAAACGACATaGCGCTGCCGTCTTCTCTCACGAACAGAGTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: GAWPSWAARKTT*RCRLLSRTEWR Trigger: CCTCCACTCTGTTCGTGAGAGAAGACGGCAGCGCCATGTCGTTTTACGTGCGGCCCAGCTCGGCCAAGCGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| CDS GCA 72 bp | TGGCCGAGCTGGGCCGCACGTAAAACGACATGGCGCTaGCGTCTTCTCTCACGAACAGAGTGGAGGAGTGAG | + |
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Preference number: 6 (lower is better) Translates to: WPSWAARKTTWR*RLLSRTEWRSE Trigger: CTCACTCCTCCACTCTGTTCGTGAGAGAAGACGGCAGCGCCATGTCGTTTTACGTGCGGCCCAGCTCGGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| CDS GCA 72 bp | AGCTTCTCGTTGCGATCCACGCAGTCTAGGATGTACTaGGTGGAGATGAAGTCGCCCGAAGCCTCGGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: SFSLRSTQSRMY*VEMKSPEASAS Trigger: GCTGGCCGAGGCTTCGGGCGACTTCATCTCCACGCAGTACATCCTAGACTGCGTGGATCGCAACGAGAAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| CDS CAA 72 bp | GCTTCTCCGAACTCCGGAGCGGCTTCCTCAAACAGCTaGTTGTCTGCCTCTCCATTCTCCTTGATCTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: ASPNSGAASSNS*LSASPFSLISP Trigger: AGGAGAGATCAAGGAGAATGGAGAGGCAGACAACAAGCTGTTTGAGGAAGCCGCTCCGGAGTTCGGAGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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| CDS GCA 72 bp | GAACTCCGGAGCGGCTTCCTCAAACAGCTTGTTGTCTaGCTCTCCATTCTCCTTGATCTCTCCTTTCACACA | + |
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Preference number: 6 (lower is better) Translates to: ELRSGFLKQLVV*LSILLDLSFHT Trigger: TGTGTGAAAGGAGAGATCAAGGAGAATGGAGAGGCAGACAACAAGCTGTTTGAGGAAGCCGCTCCGGAGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052138.11 |
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