Pregenerated sensors for TERF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031921Ensembl transcript IDs: ENSMUST00000068388.15, ENSMUST00000068421.13, ENSMUST00000116425.3, ENSMUST00000133925.8, ENSMUST00000142616.8
Found 292 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGACGGCTCAGAACCCTTTCCTGCTTACTCATGCCCTAGGGCAGTaGCCTGCAGCCTACAGCAGCCTCAGGAGCTGGCAGGGACTGTCA | + |
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Preference number: 1 (lower is better) Translates to: QTAQNPFLLTHALGQ*PAAYSSLRSWQGLS Trigger: TGACAGTCCCTGCCAGCTCCTGAGGCTGCTGTAGGCTGCAGGGCACTGCCCTAGGGCATGAGTAAGCAGGAAAGGGTTCTGAGCCGTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
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| 3UTR GCA 90 bp | GGCTCAGAACCCTTTCCTGCTTACTCATGCCCTAGGGCAGTGCCCTaGAGCCTACAGCAGCCTCAGGAGCTGGCAGGGACTGTCACATTG | + |
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Preference number: 1 (lower is better) Translates to: GSEPFPAYSCPRAVP*SLQQPQELAGTVTL Trigger: CAATGTGACAGTCCCTGCCAGCTCCTGAGGCTGCTGTAGGCTGCAGGGCACTGCCCTAGGGCATGAGTAAGCAGGAAAGGGTTCTGAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
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| 3UTR GCA 90 bp | TCAGACCAACAGGCAGACGGCTCAGAACCCTTTCCTGCTTACTCATaGCCTAGGGCAGTGCCCTGCAGCCTACAGCAGCCTCAGGAGCTG | + |
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Preference number: 1 (lower is better) Translates to: SDQQADGSEPFPAYS*PRAVPCSLQQPQEL Trigger: CAGCTCCTGAGGCTGCTGTAGGCTGCAGGGCACTGCCCTAGGGCATGAGTAAGCAGGAAAGGGTTCTGAGCCGTCTGCCTGTTGGTCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
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| 3UTR GCA 90 bp | AAGGGAAACACTAATGATCTTCTGGCACTGTCCCAGCCGTGGGCCTaGCTGTTGCCTCGGCTGTGGTCACGGCTAGTCCTGGCTTTGCTT | + |
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Preference number: 1 (lower is better) Translates to: KGNTNDLLALSQPWA*LLPRLWSRLVLALL Trigger: AAGCAAAGCCAGGACTAGCCGTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGTGCCAGAAGATCATTAGTGTTTCCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
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| 3UTR TCA 90 bp | GGGACTGAGAGGAGGTGCACAGCGGGAGAAACAAACAGTATGTTCTaGGAGCACAAGCAAACCAGTGCCTGGAGTGGGGTCCACACAGGG | + |
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Preference number: 1 (lower is better) Translates to: GTERRCTAGETNSMF*EHKQTSAWSGVHTG Trigger: CCCTGTGTGGACCCCACTCCAGGCACTGGTTTGCTTGTGCTCTCAGAACATACTGTTTGTTTCTCCCGCTGTGCACCTCCTCTCAGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
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| 3UTR CCA 90 bp | CAGAGTCCTGATCCCGATGGTGGCTGGAGGGTTCTGAGGCTGTCTTaGAGGCTCTCTAAGTGGTTTTTCCACTGGCTCTGGGTGCTTTTC | + |
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Preference number: 1 (lower is better) Translates to: QSPDPDGGWRVLRLS*RLSKWFFHWLWVLF Trigger: GAAAAGCACCCAGAGCCAGTGGAAAAACCACTTAGAGAGCCTCCAAGACAGCCTCAGAACCCTCCAGCCACCATCGGGATCAGGACTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142616.8 |
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| 3UTR CCA 90 bp | GATGGTGGCTGGAGGGTTCTGAGGCTGTCTTGGAGGCTCTCTAAGTaGTTTTTCCACTGGCTCTGGGTGCTTTTCTTCCCTCATTGTACT | + |
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Preference number: 1 (lower is better) Translates to: DGGWRVLRLSWRLSK*FFHWLWVLFFPHCT Trigger: AGTACAATGAGGGAAGAAAAGCACCCAGAGCCAGTGGAAAAACCACTTAGAGAGCCTCCAAGACAGCCTCAGAACCCTCCAGCCACCATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142616.8 |
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| 3UTR TCA 90 bp | TCATGCAGCTTAAGACCCCGGACACCCATGCTTGCTCCTTTCAGCTaGGCGACATCAGGTGAGCTAGTAACTTTTCTGTGCCTTCCTCAT | + |
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Preference number: 1 (lower is better) Translates to: SCSLRPRTPMLAPFS*ATSGELVTFLCLPH Trigger: ATGAGGAAGGCACAGAAAAGTTACTAGCTCACCTGATGTCGCTCAGCTGAAAGGAGCAAGCATGGGTGTCCGGGGTCTTAAGCTGCATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
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| 3UTR TCA 90 bp | AGAGGCGTCACAGCACAGGGGCTACTGTTGAGAACCGTGTTCTTGTaGGTCCTGTGGCTACGAAACCCTTTCTCAGTTCATGCCAAGTTT | + |
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Preference number: 1 (lower is better) Translates to: RGVTAQGLLLRTVFL*VLWLRNPFSVHAKF Trigger: AAACTTGGCATGAACTGAGAAAGGGTTTCGTAGCCACAGGACTCACAAGAACACGGTTCTCAACAGTAGCCCCTGTGCTGTGACGCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142616.8 |
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| 3UTR TCA 90 bp | AAGGCCTTTCACAGTGCAGGTCAGGACAGGGTCTCCAAACAATCATaGTACACAACAGTGTGTAGAGACGGCAATGGCCTTGGGAGATCA | + |
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Preference number: 1 (lower is better) Translates to: KAFHSAGQDRVSKQS*YTTVCRDGNGLGRS Trigger: TGATCTCCCAAGGCCATTGCCGTCTCTACACACTGTTGTGTATCATGATTGTTTGGAGACCCTGTCCTGACCTGCACTGTGAAAGGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
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| 3UTR GCA 90 bp | GGCTGTCTTGGAGGCTCTCTAAGTGGTTTTTCCACTGGCTCTGGGTaGTTTTCTTCCCTCATTGTACTTGAAGCAGCTGATTCAGATTTC | + |
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Preference number: 1 (lower is better) Translates to: GCLGGSLSGFSTGSG*FSSLIVLEAADSDF Trigger: GAAATCTGAATCAGCTGCTTCAAGTACAATGAGGGAAGAAAAGCACCCAGAGCCAGTGGAAAAACCACTTAGAGAGCCTCCAAGACAGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142616.8 |
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| 3UTR CCA 90 bp | CCCACTCGCTTTCTTCTATGGTCCACTTCTGCTTTCTTGTTAAACTaGATGACCTGTCTTCACCTGGTGCCTGAACTTCAAACAGCTGGT | + |
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Preference number: 1 (lower is better) Translates to: PTRFLLWSTSAFLLN*MTCLHLVPELQTAG Trigger: ACCAGCTGTTTGAAGTTCAGGCACCAGGTGAAGACAGGTCATCCAGTTTAACAAGAAAGCAGAAGTGGACCATAGAAGAAAGCGAGTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142616.8 |
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| 3UTR TCA 90 bp | GTCCTACAGCAGCTAGCAGAACATGGAAGATTGGGAGATCTTTGCTaGATTTGCTGGGTCTCAAATGCTCAAAGGTATAAAGCTAAGTGC | + |
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Preference number: 1 (lower is better) Translates to: VLQQLAEHGRLGDLC*ICWVSNAQRYKAKC Trigger: GCACTTAGCTTTATACCTTTGAGCATTTGAGACCCAGCAAATTCAGCAAAGATCTCCCAATCTTCCATGTTCTGCTAGCTGCTGTAGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
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| 3UTR-3UTR GCA 90 bp | ACTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCACGGCTAGTCCTCGTGGGCCTGCCTGTTaGCTCGGCTGTGGTCACGGC | + |
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Preference number: 2 (lower is better) Translates to: TVPAVGLPVASAVVTASPRGPAC*LGCGHG Trigger: GCCGTGACCACAGCCGAGGCAACAGGCAGGCCCACG...AGGACTAGCCGTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
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| 3UTR-3UTR GCA 90 bp | TTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCACGGCGGCTGGCCTTGGACTTaGTGTGACTTTCCTGCTTGT | + |
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Preference number: 2 (lower is better) Translates to: FWHCPSRGPACCLGCGHGGWPWT*CDFPAC Trigger: ACAAGCAGGAAAGTCACAGCAAGTCCAAGGCCAGCC...GCCGTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGTGCCAGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142616.8 |
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| 3UTR-3UTR TCA 90 bp | ACTCATGCCCTAGGGCAGTGCCCTGCAGCCTACAGCAGCCTCAGGAGCTGGCAGCTCATCCTAGCAGTCTaGGCAAGCCTTGGTGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: THALGQCPAAYSSLRSWQLILAV*ASLGGE Trigger: CTCTCCACCAAGGCTTGCTCAGACTGCTAGGATGAG...CTGCCAGCTCCTGAGGCTGCTGTAGGCTGCAGGGCACTGCCCTAGGGCATGAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
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| 3UTR-3UTR CCA 90 bp | GCATTCATCAATGTGGGGGCTGAGGCAGGCAGGTCCAGGGTGGTCGCAAGTAGCCTGTTGCCTCGGCTGTaGTCACGGCTAGTCCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: AFINVGAEAGRSRVVASSLLPRL*SRLVLA Trigger: AGCCAGGACTAGCCGTGACCACAGCCGAGGCAACAG...GCTACTTGCGACCACCCTGGACCTGCCTGCCTCAGCCCCCACATTGATGAATGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
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| 3UTR-3UTR GCA 90 bp | CTTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCACGGTCCACTGGCTCTGGGTaGTTTTCTTCCCTCATTGTA | + |
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Preference number: 2 (lower is better) Translates to: LLALSQPWACLLPRLWSRSTGSG*FSSLIV Trigger: TACAATGAGGGAAGAAAAGCACCCAGAGCCAGTGGA...CCGTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGTGCCAGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142616.8 |
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| 3UTR-3UTR TCA 90 bp | ACTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCACGGCTAGTCCTTGCTTTTTAGCTCCATaGTCTCCAGCAACAGTGACG | + |
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Preference number: 2 (lower is better) Translates to: TVPAVGLPVASAVVTASPCFLAP*SPATVT Trigger: CGTCACTGTTGCTGGAGATCATGGAGCTAAAAAGCA...AGGACTAGCCGTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
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| 3UTR-3UTR GCA 90 bp | GGCAGGGACAGCTATACAAGGGTTCATGGGGAAGGGGGAGTTTCAGGAGAGGAACCTAGGGCAGTGCCCTaGAGCCTACAGCAGCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: GRDSYTRVHGEGGVSGEEPRAVP*SLQQPQ Trigger: CTGAGGCTGCTGTAGGCTGCAGGGCACTGCCCTAGG...TTCCTCTCCTGAAACTCCCCCTTCCCCATGAACCCTTGTATAGCTGTCCCTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
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| 3UTR CAA 90 bp | AACACTAATGATCTTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGTaGCCTCGGCTGTGGTCACGGCTAGTCCTGGCTTTGCTTTTTAGC | + |
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Preference number: 2 (lower is better) Translates to: NTNDLLALSQPWACL*PRLWSRLVLALLFS Trigger: GCTAAAAAGCAAAGCCAGGACTAGCCGTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGTGCCAGAAGATCATTAGTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
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| 3UTR-3UTR TCA 90 bp | TCATCAATGTGGGGGCTGAGGCAGGCAGGTCCAGGGTGGTCGCAAGTAGCTGAAGCCTTGGACTTGCTGTaGCTTTCCTGCTTGTTTCCC | + |
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Preference number: 2 (lower is better) Translates to: SSMWGLRQAGPGWSQVAEALDLL*LSCLFP Trigger: GGGAAACAAGCAGGAAAGTCACAGCAAGTCCAAGGC...TTCAGCTACTTGCGACCACCCTGGACCTGCCTGCCTCAGCCCCCACATTGATGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142616.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGGGGCTACTGTTGAGAACCGTGTTCTTGTGAGTCCTGTGGCTACGAAACCCCTGTTGCCTCGGCTGTaGTCACGGCTAGTCCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: TGATVENRVLVSPVATKPLLPRL*SRLVLA Trigger: AGCCAGGACTAGCCGTGACCACAGCCGAGGCAACAG...GGGTTTCGTAGCCACAGGACTCACAAGAACACGGTTCTCAACAGTAGCCCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGCTATACAAGGGTTCATGGGGAAGGGGGAGTTTCAGGAGAGGAACTGTATACATGCCCTAGGGCAGTaGCCTGCAGCCTACAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: TAIQGFMGKGEFQERNCIHALGQ*PAAYSS Trigger: GCTGCTGTAGGCTGCAGGGCACTGCCCTAGGGCATG...TATACAGTTCCTCTCCTGAAACTCCCCCTTCCCCATGAACCCTTGTATAGCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
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| 3UTR-3UTR GCA 90 bp | AATGGCCTTGGGAGATCAGTGTGGCAAAGGCCTTACGGCAGGGACAGCTATACATGCTGTCCAGCATCATaGAGCTTAAGACCCCGGACA | + |
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Preference number: 2 (lower is better) Translates to: NGLGRSVWQRPYGRDSYTCCPAS*SLRPRT Trigger: TGTCCGGGGTCTTAAGCTGCATGATGCTGGACAGCA...TGTATAGCTGTCCCTGCCGTAAGGCCTTTGCCACACTGATCTCCCAAGGCCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
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| 3UTR-3UTR TCA 90 bp | GCATTCATCAATGTGGGGGCTGAGGCAGGCAGGTCCAGGGTGGTCGCAAGTAGCACTAGGGATTCAAATTaGAGCAAAGCACTAAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: AFINVGAEAGRSRVVASSTRDSN*SKALKG Trigger: TCCCTTTAGTGCTTTGCTTCAATTTGAATCCCTAGT...GCTACTTGCGACCACCCTGGACCTGCCTGCCTCAGCCCCCACATTGATGAATGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGCTATACAAGGGTTCATGGGGAAGGGGGAGTTTCAGGAGAGGAACTGTATAGACCCCGGACACCCATaGTTGCTCCTTTCAGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: TAIQGFMGKGEFQERNCIDPGHP*LLLSAE Trigger: CTCAGCTGAAAGGAGCAAGCATGGGTGTCCGGGGTC...TATACAGTTCCTCTCCTGAAACTCCCCCTTCCCCATGAACCCTTGTATAGCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
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| 3UTR-3UTR TCA 90 bp | ACAGGGGCTACTGTTGAGAACCGTGTTCTTGTGAGTCCTGTGGCTACGAAACCCTGCTTTTTAGCTCCATaGTCTCCAGCAACAGTGACG | + |
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Preference number: 2 (lower is better) Translates to: TGATVENRVLVSPVATKPCFLAP*SPATVT Trigger: CGTCACTGTTGCTGGAGATCATGGAGCTAAAAAGCA...GGGTTTCGTAGCCACAGGACTCACAAGAACACGGTTCTCAACAGTAGCCCCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
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| 3UTR-3UTR TCA 90 bp | GGCAATGGCCTTGGGAGATCAGTGTGGCAAAGGCCTTACGGCAGGGACAGCTATACAAACAGTATGTTCTaGGAGCACAAGCAAACCAGT | + |
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Preference number: 2 (lower is better) Translates to: GNGLGRSVWQRPYGRDSYTNSMF*EHKQTS Trigger: ACTGGTTTGCTTGTGCTCTCAGAACATACTGTTTGT...ATAGCTGTCCCTGCCGTAAGGCCTTTGCCACACTGATCTCCCAAGGCCATTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
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| 3UTR-3UTR CCA 90 bp | TCAAGCCCGTTAGGGCTGTTCCACTTGTCTTTGGATGCTCAGATCTTTCTGGTCAGACCAGGCTGGCCTTaGACTTGCTGTGACTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: SSPLGLFHLSLDAQIFLVRPGWP*TCCDFP Trigger: AGGAAAGTCACAGCAAGTCCAAGGCCAGCCTGGTCT...GACCAGAAAGATCTGAGCATCCAAAGACAAGTGGAACAGCCCTAACGGGCTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142616.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGGGGCTACTGTTGAGAACCGTGTTCTTGTGAGTCCTGTGGCTACGAAACCCGTTCTGAGGCTGTCTTaGAGGCTCTCTAAGTGGTTT | + |
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Preference number: 2 (lower is better) Translates to: TGATVENRVLVSPVATKPVLRLS*RLSKWF Trigger: AAACCACTTAGAGAGCCTCCAAGACAGCCTCAGAAC...GGGTTTCGTAGCCACAGGACTCACAAGAACACGGTTCTCAACAGTAGCCCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142616.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGGGGCTACTGTTGAGAACCGTGTTCTTGTGAGTCCTGTGGCTACGAAACCCAAGTGGTTTTTCCACTaGCTCTGGGTGCTTTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: TGATVENRVLVSPVATKPKWFFH*LWVLFF Trigger: GAAGAAAAGCACCCAGAGCCAGTGGAAAAACCACTT...GGGTTTCGTAGCCACAGGACTCACAAGAACACGGTTCTCAACAGTAGCCCCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000142616.8 |
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| 3UTR-3UTR GCA 90 bp | ACATCAGGTGAGCTAGTAACTTTTCTGTGCCTTCCTCATCTATACGATAGGGCTGGGACTGAGAGGAGGTaGACAGCGGGAGAAACAAAC | + |
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Preference number: 2 (lower is better) Translates to: TSGELVTFLCLPHLYDRAGTERR*TAGETN Trigger: GTTTGTTTCTCCCGCTGTGCACCTCCTCTCAGTCCC...AGCCCTATCGTATAGATGAGGAAGGCACAGAAAAGTTACTAGCTCACCTGATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
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| 3UTR-3UTR GCA 90 bp | GGCAATGGCCTTGGGAGATCAGTGTGGCAAAGGCCTTACGGCAGGGACAGCTATAGGTATAAAGCTAAGTaGTCACTGGTCTTTCATAAA | + |
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Preference number: 2 (lower is better) Translates to: GNGLGRSVWQRPYGRDSYRYKAK*SLVFHK Trigger: TTTATGAAAGACCAGTGAGCACTTAGCTTTATACCT...ATAGCTGTCCCTGCCGTAAGGCCTTTGCCACACTGATCTCCCAAGGCCATTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
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| 3UTR-3UTR TCA 90 bp | AGGGAAGGGGCGGCTAAGCTTATCTACAATCACCATTTAACCAAACACCACTTGACTAGGGATTCAAATTaGAGCAAAGCACTAAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: REGAAKLIYNHHLTKHHLTRDSN*SKALKG Trigger: TCCCTTTAGTGCTTTGCTTCAATTTGAATCCCTAGT...CAAGTGGTGTTTGGTTAAATGGTGATTGTAGATAAGCTTAGCCGCCCCTTCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
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| 3UTR-3UTR CCA 90 bp | TTTTGTACTGAAACTCAACGAGGATTAAATTCATTCCCGGTAACGTTCACATTTTGGAGGCTCTCTAAGTaGTTTTTCCACTGGCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: FCTETQRGLNSFPVTFTFWRLSK*FFHWLW Trigger: CCAGAGCCAGTGGAAAAACCACTTAGAGAGCCTCCA...AAATGTGAACGTTACCGGGAATGAATTTAATCCTCGTTGAGTTTCAGTACAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000142616.8 |
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| 3UTR-3UTR CAA 90 bp | CTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCACGGCTAGTCCTGCCGTGGGCCTGCCTGTaGCCTCGGCTGTGGTCACGG | + |
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Preference number: 3 (lower is better) Translates to: LSQPWACLLPRLWSRLVLPWACL*PRLWSR Trigger: CCGTGACCACAGCCGAGGCAACAGGCAGGCCCACGG...CAGGACTAGCCGTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
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| 3UTR-3UTR CAA 90 bp | CTAAAGGGAAACACTAATGATCTTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGCCGTGGGCCTGCCTGTaGCCTCGGCTGTGGTCACGG | + |
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Preference number: 3 (lower is better) Translates to: LKGNTNDLLALSQPWACLPWACL*PRLWSR Trigger: CCGTGACCACAGCCGAGGCAACAGGCAGGCCCACGG...CAGGCAGGCCCACGGCTGGGACAGTGCCAGAAGATCATTAGTGTTTCCCTTTAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
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| 3UTR GCA 72 bp | CCCTTTCCTGCTTACTCATGCCCTAGGGCAGTGCCCTaGAGCCTACAGCAGCCTCAGGAGCTGGCAGGGACT | + |
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Preference number: 3 (lower is better) Translates to: PFPAYSCPRAVP*SLQQPQELAGT Trigger: AGTCCCTGCCAGCTCCTGAGGCTGCTGTAGGCTGCAGGGCACTGCCCTAGGGCATGAGTAAGCAGGAAAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
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| 3UTR CCA 72 bp | CTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTaGTCACGGCTAGTCCTGGCTTTGCTTTTTAGCTCC | + |
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Preference number: 3 (lower is better) Translates to: LSQPWACLLPRL*SRLVLALLFSS Trigger: GGAGCTAAAAAGCAAAGCCAGGACTAGCCGTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
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| 3UTR GCA 72 bp | ACTAATGATCTTCTGGCACTGTCCCAGCCGTGGGCCTaGCTGTTGCCTCGGCTGTGGTCACGGCTAGTCCTG | + |
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Preference number: 3 (lower is better) Translates to: TNDLLALSQPWA*LLPRLWSRLVL Trigger: CAGGACTAGCCGTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGTGCCAGAAGATCATTAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
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| 3UTR GCA 72 bp | CAGAACCCTTTCCTGCTTACTCATGCCCTAGGGCAGTaGCCTGCAGCCTACAGCAGCCTCAGGAGCTGGCAG | + |
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Preference number: 3 (lower is better) Translates to: QNPFLLTHALGQ*PAAYSSLRSWQ Trigger: CTGCCAGCTCCTGAGGCTGCTGTAGGCTGCAGGGCACTGCCCTAGGGCATGAGTAAGCAGGAAAGGGTTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
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| 3UTR GCA 72 bp | CAGGCAGACGGCTCAGAACCCTTTCCTGCTTACTCATaGCCTAGGGCAGTGCCCTGCAGCCTACAGCAGCCT | + |
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Preference number: 3 (lower is better) Translates to: QADGSEPFPAYS*PRAVPCSLQQP Trigger: AGGCTGCTGTAGGCTGCAGGGCACTGCCCTAGGGCATGAGTAAGCAGGAAAGGGTTCTGAGCCGTCTGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
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| 3UTR-3UTR CAA 90 bp | CTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCACGGCTAGTCCTGTTAGGGCTGTTCCACTaGTCTTTGGATGCTCAGATC | + |
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Preference number: 3 (lower is better) Translates to: LSQPWACLLPRLWSRLVLLGLFH*SLDAQI Trigger: GATCTGAGCATCCAAAGACAAGTGGAACAGCCCTAA...CAGGACTAGCCGTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142616.8 |
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| 3UTR CCA 72 bp | GAAAGCTGCCTTCAGAGTCCTGATCCCGATGGTGGCTaGAGGGTTCTGAGGCTGTCTTGGAGGCTCTCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: ESCLQSPDPDGG*RVLRLSWRLSK Trigger: CTTAGAGAGCCTCCAAGACAGCCTCAGAACCCTCCAGCCACCATCGGGATCAGGACTCTGAAGGCAGCTTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142616.8 |
||
| 3UTR GCA 72 bp | AACTGTATAGGTGGCCTCAGCTGCTGTCCAGCATCATaGAGCTTAAGACCCCGGACACCCATGCTTGCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: NCIGGLSCCPAS*SLRPRTPMLAP Trigger: AGGAGCAAGCATGGGTGTCCGGGGTCTTAAGCTGCATGATGCTGGACAGCAGCTGAGGCCACCTATACAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| 3UTR CCA 72 bp | GGGGAAGGGGGAGTTTCAGGAGAGGAACTGTATAGGTaGCCTCAGCTGCTGTCCAGCATCATGCAGCTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: GEGGVSGEELYR*PQLLSSIMQLK Trigger: CTTAAGCTGCATGATGCTGGACAGCAGCTGAGGCCACCTATACAGTTCCTCTCCTGAAACTCCCCCTTCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| 3UTR TCA 72 bp | AGGAGGTGCACAGCGGGAGAAACAAACAGTATGTTCTaGGAGCACAAGCAAACCAGTGCCTGGAGTGGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: RRCTAGETNSMF*EHKQTSAWSGV Trigger: GACCCCACTCCAGGCACTGGTTTGCTTGTGCTCTCAGAACATACTGTTTGTTTCTCCCGCTGTGCACCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| 3UTR GCA 72 bp | GAGTTTCAGGAGAGGAACTGTATAGGTGGCCTCAGCTaGTGTCCAGCATCATGCAGCTTAAGACCCCGGACA | + |
|
Preference number: 3 (lower is better) Translates to: EFQERNCIGGLS*CPASCSLRPRT Trigger: TGTCCGGGGTCTTAAGCTGCATGATGCTGGACAGCAGCTGAGGCCACCTATACAGTTCCTCTCCTGAAACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| 3UTR TCA 72 bp | CTTCTGAAAGAGGCGTCACAGCACAGGGGCTACTGTTaGGAACCGTGTTCTTGTGAGTCCTGTGGCTACGAA | + |
|
Preference number: 3 (lower is better) Translates to: LLKEASQHRGYC*EPCSCESCGYE Trigger: TTCGTAGCCACAGGACTCACAAGAACACGGTTCTCAACAGTAGCCCCTGTGCTGTGACGCCTCTTTCAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
||
| 3UTR CCA 72 bp | TGGAGGGTTCTGAGGCTGTCTTGGAGGCTCTCTAAGTaGTTTTTCCACTGGCTCTGGGTGCTTTTCTTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: WRVLRLSWRLSK*FFHWLWVLFFP Trigger: AGGGAAGAAAAGCACCCAGAGCCAGTGGAAAAACCACTTAGAGAGCCTCCAAGACAGCCTCAGAACCCTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142616.8 |
||
| 3UTR TCA 72 bp | TTAAGACCCCGGACACCCATGCTTGCTCCTTTCAGCTaGGCGACATCAGGTGAGCTAGTAACTTTTCTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: LRPRTPMLAPFS*ATSGELVTFLC Trigger: GCACAGAAAAGTTACTAGCTCACCTGATGTCGCTCAGCTGAAAGGAGCAAGCATGGGTGTCCGGGGTCTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| 3UTR TCA 72 bp | CACAGTGCAGGTCAGGACAGGGTCTCCAAACAATCATaGTACACAACAGTGTGTAGAGACGGCAATGGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: HSAGQDRVSKQS*YTTVCRDGNGL Trigger: AAGGCCATTGCCGTCTCTACACACTGTTGTGTATCATGATTGTTTGGAGACCCTGTCCTGACCTGCACTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| 3UTR GCA 72 bp | GGAAGCCATGTTATCACATGCCAAGGCCTTTCACAGTaGAGGTCAGGACAGGGTCTCCAAACAATCATGATA | + |
|
Preference number: 3 (lower is better) Translates to: GSHVITCQGLSQ*RSGQGLQTIMI Trigger: TATCATGATTGTTTGGAGACCCTGTCCTGACCTGCACTGTGAAAGGCCTTGGCATGTGATAACATGGCTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| 3UTR CCA 72 bp | GGCTGTTCCACTTGTCTTTGGATGCTCAGATCTTTCTaGTCCAGTTTTGCAAAAGCGGCCTCTGAGTCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: GCSTCLWMLRSF*SSFAKAASESC Trigger: ACAAGACTCAGAGGCCGCTTTTGCAAAACTGGACCAGAAAGATCTGAGCATCCAAAGACAAGTGGAACAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142616.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTCTGAATGTAAGAGTACACCCAATGCAAGGAAGCCATGTTATCACATGCCAAGCAGGGACTGTCACATaGTCACTCCCTGCTCCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: FLNVRVHPMQGSHVITCQAGTVT*SLPAPV Trigger: GACTGGAGCAGGGAGTGACAATGTGACAGTCCCTGC...TTGGCATGTGATAACATGGCTTCCTTGCATTGGGTGTACTCTTACATTCAGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| 3UTR TCA 72 bp | ACCCATGCTTGCTCCTTTCAGCTGAGCGACATCAGGTaGGCTAGTAACTTTTCTGTGCCTTCCTCATCTATA | + |
|
Preference number: 3 (lower is better) Translates to: THACSFQLSDIR*ASNFSVPSSSI Trigger: TATAGATGAGGAAGGCACAGAAAAGTTACTAGCTCACCTGATGTCGCTCAGCTGAAAGGAGCAAGCATGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| 3UTR-3UTR CAA 90 bp | GTCTTTGGATGCTCAGATCTTTCTGGTCCAGTTTTGCAAAAGCGGCCTCTGAGTCTTCCCTCATTGTACTaGAAGCAGCTGATTCAGATT | + |
|
Preference number: 3 (lower is better) Translates to: VFGCSDLSGPVLQKRPLSLPSLY*KQLIQI Trigger: AATCTGAATCAGCTGCTTCAAGTACAATGAGGGAAG...ACTCAGAGGCCGCTTTTGCAAAACTGGACCAGAAAGATCTGAGCATCCAAAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142616.8 |
||
| 3UTR CCA 72 bp | TTTCTTCTATGGTCCACTTCTGCTTTCTTGTTAAACTaGATGACCTGTCTTCACCTGGTGCCTGAACTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: FLLWSTSAFLLN*MTCLHLVPELQ Trigger: TTGAAGTTCAGGCACCAGGTGAAGACAGGTCATCCAGTTTAACAAGAAAGCAGAAGTGGACCATAGAAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142616.8 |
||
| 3UTR TCA 72 bp | TCTCATCTGGGCTCAACATACAGAGCTCTTTTGTACTaGAACTCAACGAGGATTAAATTCATTCCCGGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: SHLGSTYRALLY*NSTRIKFIPGN Trigger: GTTACCGGGAATGAATTTAATCCTCGTTGAGTTTCAGTACAAAAGAGCTCTGTATGTTGAGCCCAGATGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
||
| 3UTR TCA 72 bp | CAGCTAGCAGAACATGGAAGATTGGGAGATCTTTGCTaGATTTGCTGGGTCTCAAATGCTCAAAGGTATAAA | + |
|
Preference number: 3 (lower is better) Translates to: QLAEHGRLGDLC*ICWVSNAQRYK Trigger: TTTATACCTTTGAGCATTTGAGACCCAGCAAATTCAGCAAAGATCTCCCAATCTTCCATGTTCTGCTAGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| 3UTR CCA 72 bp | TCTCAAATGCTCAAAGGTATAAAGCTAAGTGCTCACTaGTCTTTCATAAATATCAAGTATAATGAGGCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: SQMLKGIKLSAH*SFINIKYNEAQ Trigger: TTGGGCCTCATTATACTTGATATTTATGAAAGACCAGTGAGCACTTAGCTTTATACCTTTGAGCATTTGAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| 3UTR TCA 72 bp | TCTTGGAAGATTTTACGGAATACTAGGGATTCAAATTaGAGCAAAGCACTAAAGGGAAACACTAATGATCTT | + |
|
Preference number: 3 (lower is better) Translates to: SWKILRNTRDSN*SKALKGNTNDL Trigger: AAGATCATTAGTGTTTCCCTTTAGTGCTTTGCTTCAATTTGAATCCCTAGTATTCCGTAAAATCTTCCAAGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
||
| CDS-3UTR CCA 90 bp | TCTTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCACGCCCCGCCCTCCCGACTaGGCCGTTTCCTTGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSGTVPAVGLPVASAVVTPRPPD*AVSLAV Trigger: CACAGCCAAGGAAACGGCCCAGTCGGGAGGGCGGGG...CGTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGTGCCAGAAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR GCA 90 bp | CTTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCACGGAACCGGGACACCGTATaGTCCTTCCCCAAGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLALSQPWACLLPRLWSRNRDTV*SFPKGL Trigger: CAGGCCCTTGGGGAAGGAGCATACGGTGTCCCGGTT...CCGTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGTGCCAGAAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
||
| CDS-3UTR GCA 90 bp | TTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCACGGCAACCGGGACACCGTATaGTCCTTCCCCAAGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FWHCPSRGPACCLGCGHGNRDTV*SFPKGL Trigger: CAGGCCCTTGGGGAAGGAGCATACGGTGTCCCGGTT...GCCGTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGTGCCAGAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
||
| CDS-3UTR CCA 90 bp | CTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCACGGCTAGTCCTGTCATGGGACTGTTCCTaGGCTGCCGGTCTGAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSQPWACLLPRLWSRLVLSWDCS*AAGLSL Trigger: GAGGCTCAGACCGGCAGCCCAGGAACAGTCCCATGA...CAGGACTAGCCGTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR TCA 90 bp | TCTTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCACGGTGGCTGGAGGGTTCTaGGGCTGTCTTGGAGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSGTVPAVGLPVASAVVTVAGGF*GCLGGS Trigger: AGAGCCTCCAAGACAGCCTCAGAACCCTCCAGCCAC...CGTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGTGCCAGAAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068388.15 ENSMUST00000133925.8 |
||
| CDS-3UTR GCA 90 bp | GCCACAATTCTCATCGCAGTCCCGCTTCTGAAAGAGGCGTCACAGCACAGGGGCGCCCGCTGCTATCGCTaGTCCCGCCTCCTCCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ATILIAVPLLKEASQHRGARCYR*SRLLPP Trigger: TGGCGGGAGGAGGCGGGAGCAGCGATAGCAGCGGGC...GCCCCTGTGCTGTGACGCCTCTTTCAGAAGCGGGACTGCGATGAGAATTGTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR CCA 90 bp | ACTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCACGGCTAGTCCTGGAGGAGTTGAGGCCTaGGCTGGGCTCAGTACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TVPAVGLPVASAVVTASPGGVEA*AGLSTL Trigger: CAGAGTACTGAGCCCAGCCCAGGCCTCAACTCCTCC...AGGACTAGCCGTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR GCA 90 bp | CGGCTGTGGTCACGGCTAGTCCTGGCTTTGCTTTTTAGCTCCATGATCTCCAGCTCGCCGCCCGCCCGCTaGTATCGCTGCTCCCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RLWSRLVLALLFSSMISSSPPAR*YRCSRL Trigger: GAGGCGGGAGCAGCGATAGCAGCGGGCGGGCGGCGA...GCTGGAGATCATGGAGCTAAAAAGCAAAGCCAGGACTAGCCGTGACCACAGCCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR GCA 90 bp | GATCTTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCAAACCGGGACACCGTATaGTCCTTCCCCAAGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: DLLALSQPWACLLPRLWSNRDTV*SFPKGL Trigger: CAGGCCCTTGGGGAAGGAGCATACGGTGTCCCGGTT...TGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGTGCCAGAAGATC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
||
| CDS-3UTR GCA 90 bp | ACTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCACGGCTAGTCCTATGCGCGACAGACACTaGATAACCCGCAGCAACCGG | + |
|
Preference number: 4 (lower is better) Translates to: TVPAVGLPVASAVVTASPMRDRH*ITRSNR Trigger: CCGGTTGCTGCGGGTTATGCAGTGTCTGTCGCGCAT...AGGACTAGCCGTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
||
| CDS-3UTR CCA 90 bp | CTTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCACGGTCCGTGTCATCCAGGTaGCTCTCTAGGAAACGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLALSQPWACLLPRLWSRSVSSR*LSRKRS Trigger: GCTGCGTTTCCTAGAGAGCCACCTGGATGACACGGA...CCGTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGTGCCAGAAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
||
| CDS-3UTR CCA 90 bp | ACTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCACGGCTAGTCCTGATCCCGATGGTGGCTaGAGGGTTCTGAGGCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TVPAVGLPVASAVVTASPDPDGG*RVLRLS Trigger: AGACAGCCTCAGAACCCTCCAGCCACCATCGGGATC...AGGACTAGCCGTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR CCA 90 bp | ACTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCACGGCTAGTCCTCTGGGCTCAGTACTCTaGCTGTCCTCCTCCAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: TVPAVGLPVASAVVTASPLGSVL*LSSSNS Trigger: GCTGTTGGAGGAGGACAGCCAGAGTACTGAGCCCAG...AGGACTAGCCGTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR TCA 90 bp | CTTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCACGGTCTTCACCTGGTGCCTaGACTTCAAACAGCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLALSQPWACLLPRLWSRSSPGA*TSNSWS Trigger: GGACCAGCTGTTTGAAGTTCAGGCACCAGGTGAAGA...CCGTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGTGCCAGAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR GCA 90 bp | ATCTTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCACATGATGTCCCGGATCTaGCTGAAGTCCCGGTACCGG | + |
|
Preference number: 4 (lower is better) Translates to: IFWHCPSRGPACCLGCGHMMSRI*LKSRYR Trigger: CCGGTACCGGGACTTCAGGCAGATCCGGGACATCAT...GTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGTGCCAGAAGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
||
| CDS-3UTR TCA 90 bp | CTTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCACGGCTGATTCCAAGGGTGTaGGCTCAGCCTCCATATCAA | + |
|
Preference number: 4 (lower is better) Translates to: LLALSQPWACLLPRLWSRLIPRV*AQPPYQ Trigger: TTGATATGGAGGCTGAGCTCACACCCTTGGAATCAG...CCGTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGTGCCAGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
||
| CDS-3UTR GCA 90 bp | CTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCACGGCTAGTCCTGCCACTTGTCTTTGGATaGTTTGGGCTTCTTCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LSQPWACLLPRLWSRLVLPLVFG*FGLLLP Trigger: GGGGAGAAGAAGCCCAAAGCATCCAAAGACAAGTGG...CAGGACTAGCCGTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR CCA 90 bp | TTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCACGGCTTCTGGATAACAGGGTaGGCCAAGTTCTTTTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: FWHCPSRGPACCLGCGHGFWITG*AKFFSR Trigger: CCGGGAAAAGAACTTGGCCCACCCTGTTATCCAGAA...GCCGTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGTGCCAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
||
| CDS-3UTR CCA 90 bp | CTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCACGGCTAGTCCTGATCTGCTTATTGTCATaGGACTGTTCCTGGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LSQPWACLLPRLWSRLVLICLLS*DCSWAA Trigger: GGCAGCCCAGGAACAGTCCCATGACAATAAGCAGAT...CAGGACTAGCCGTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR TCA 90 bp | TCTTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCACGCAGCACATTGATAGCTaGTTCCAAGGGTGTGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSGTVPAVGLPVASAVVTQHIDS*FQGCEL Trigger: GAGCTCACACCCTTGGAATCAGCTATCAATGTGCTG...CGTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGTGCCAGAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
||
| CDS-3UTR TCA 90 bp | GATCTTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCATCTTCACCTGGTGCCTaGACTTCAAACAGCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: DLLALSQPWACLLPRLWSSSPGA*TSNSWS Trigger: GGACCAGCTGTTTGAAGTTCAGGCACCAGGTGAAGA...TGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGTGCCAGAAGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR GCA 90 bp | AACCCTTTCCTGCTTACTCATGCCCTAGGGCAGTGCCCTGCAGCCTACAGCAGCAACCGGGACACCGTATaGTCCTTCCCCAAGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NPFLLTHALGQCPAAYSSNRDTV*SFPKGL Trigger: CAGGCCCTTGGGGAAGGAGCATACGGTGTCCCGGTT...GCTGCTGTAGGCTGCAGGGCACTGCCCTAGGGCATGAGTAAGCAGGAAAGGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| CDS-3UTR CCA 90 bp | TCATCAATGTGGGGGCTGAGGCAGGCAGGTCCAGGGTGGTCGCAAGTAGCTGAAGCTGACATGGCCTTGTaGGAGGAGTTGAGGCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSMWGLRQAGPGWSQVAEADMAL*EELRPG Trigger: CCCAGGCCTCAACTCCTCCCACAAGGCCATGTCAGC...TTCAGCTACTTGCGACCACCCTGGACCTGCCTGCCTCAGCCCCCACATTGATGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR CCA 90 bp | GATCTTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCATGTCTTTGGATGCTTTaGGCTTCTTCTCCCCCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: DLLALSQPWACLLPRLWSCLWML*ASSPPG Trigger: ACCCGGGGGAGAAGAAGCCCAAAGCATCCAAAGACA...TGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGTGCCAGAAGATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR TCA 90 bp | CGTCACAGCACAGGGGCTACTGTTGAGAACCGTGTTCTTGTGAGTCCTGTGGCTTGTCCCGGATCTGCCTaGAGTCCCGGTACCGGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: RHSTGATVENRVLVSPVACPGSA*SPGTGY Trigger: GTAGCCGGTACCGGGACTTCAGGCAGATCCGGGACA...AGCCACAGGACTCACAAGAACACGGTTCTCAACAGTAGCCCCTGTGCTGTGACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
||
| CDS-3UTR TCA 90 bp | GATGCCACAATTCTCATCGCAGTCCCGCTTCTGAAAGAGGCGTCACAGCACAGGCCGGGTGGGGTTGGTTaGGAGCTCTGGGCTTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: DATILIAVPLLKEASQHRPGGVG*ELWAWM Trigger: CATCCAAGCCCAGAGCTCTCAACCAACCCCACCCGG...CCTGTGCTGTGACGCCTCTTTCAGAAGCGGGACTGCGATGAGAATTGTGGCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR TCA 90 bp | CGTCACAGCACAGGGGCTACTGTTGAGAACCGTGTTCTTGTGAGTCCTGTGGCTCCGGGTGGGGTTGGTTaGGAGCTCTGGGCTTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: RHSTGATVENRVLVSPVAPGGVG*ELWAWM Trigger: CATCCAAGCCCAGAGCTCTCAACCAACCCCACCCGG...AGCCACAGGACTCACAAGAACACGGTTCTCAACAGTAGCCCCTGTGCTGTGACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR CCA 90 bp | TTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCACGGCAAGTGGTTTTTCCACTaGCTCTGGGTGCTTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FWHCPSRGPACCLGCGHGKWFFH*LWVLFF Trigger: GAAGAAAAGCACCCAGAGCCAGTGGAAAAACCACTT...GCCGTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGTGCCAGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR CCA 90 bp | GATCTTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCAGGTCTCTTGTGTTTGTaGGCTGGTGATGATGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: DLLALSQPWACLLPRLWSGLLCL*AGDDGD Trigger: ATCCCCATCATCACCAGCCCACAAACACAAGAGACC...TGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGTGCCAGAAGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR CCA 90 bp | ATCTTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCACGGTCTCTTGTGTTTGTaGGCTGGTGATGATGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: IFWHCPSRGPACCLGCGHGLLCL*AGDDGD Trigger: ATCCCCATCATCACCAGCCCACAAACACAAGAGACC...GTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGTGCCAGAAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR CCA 90 bp | AACCCTTTCCTGCTTACTCATGCCCTAGGGCAGTGCCCTGCAGCCTACAGCAGCCTGGGCTCAGTACTCTaGCTGTCCTCCTCCAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: NPFLLTHALGQCPAAYSSLGSVL*LSSSNS Trigger: GCTGTTGGAGGAGGACAGCCAGAGTACTGAGCCCAG...GCTGCTGTAGGCTGCAGGGCACTGCCCTAGGGCATGAGTAAGCAGGAAAGGGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| CDS-3UTR CCA 90 bp | TCTTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCACGGTTCTGAGGCTGTCTTaGAGGCTCTCTAAGTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSGTVPAVGLPVASAVVTVLRLS*RLSKWF Trigger: AAACCACTTAGAGAGCCTCCAAGACAGCCTCAGAAC...CGTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGTGCCAGAAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068388.15 ENSMUST00000133925.8 |
||
| CDS-3UTR TCA 90 bp | ACAGGGGCTACTGTTGAGAACCGTGTTCTTGTGAGTCCTGTGGCTACGAAACCCTGTCCCGGATCTGCCTaGAGTCCCGGTACCGGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: TGATVENRVLVSPVATKPCPGSA*SPGTGY Trigger: GTAGCCGGTACCGGGACTTCAGGCAGATCCGGGACA...GGGTTTCGTAGCCACAGGACTCACAAGAACACGGTTCTCAACAGTAGCCCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
||
| CDS-3UTR GCA 90 bp | ACAGCTATACAAGGGTTCATGGGGAAGGGGGAGTTTCAGGAGAGGAACTGTATAGCCCGCTGCTATCGCTaGTCCCGCCTCCTCCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TAIQGFMGKGEFQERNCIARCYR*SRLLPP Trigger: TGGCGGGAGGAGGCGGGAGCAGCGATAGCAGCGGGC...TATACAGTTCCTCTCCTGAAACTCCCCCTTCCCCATGAACCCTTGTATAGCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| CDS-3UTR GCA 90 bp | AGGGAAACACTAATGATCTTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGTTGCATGATGTCCCGGATCTaGCTGAAGTCCCGGTACCGG | + |
|
Preference number: 4 (lower is better) Translates to: RETLMIFWHCPSRGPACCMMSRI*LKSRYR Trigger: CCGGTACCGGGACTTCAGGCAGATCCGGGACATCAT...GCAACAGGCAGGCCCACGGCTGGGACAGTGCCAGAAGATCATTAGTGTTTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
||
| CDS-3UTR GCA 90 bp | CGGCTGTGGTCACGGCTAGTCCTGGCTTTGCTTTTTAGCTCCATGATCTCCAGCAACCGGGACACCGTATaGTCCTTCCCCAAGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RLWSRLVLALLFSSMISSNRDTV*SFPKGL Trigger: CAGGCCCTTGGGGAAGGAGCATACGGTGTCCCGGTT...GCTGGAGATCATGGAGCTAAAAAGCAAAGCCAGGACTAGCCGTGACCACAGCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
||
| CDS-3UTR GCA 90 bp | ATCTTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCACTCCACTGGCTCTGGGTaGTTTTCTTCCCTCATTGTA | + |
|
Preference number: 4 (lower is better) Translates to: IFWHCPSRGPACCLGCGHSTGSG*FSSLIV Trigger: TACAATGAGGGAAGAAAAGCACCCAGAGCCAGTGGA...GTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGTGCCAGAAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR GCA 90 bp | ACTCATGCCCTAGGGCAGTGCCCTGCAGCCTACAGCAGCCTCAGGAGCTGGCAGTCCACTGGCTCTGGGTaGTTTTCTTCCCTCATTGTA | + |
|
Preference number: 4 (lower is better) Translates to: THALGQCPAAYSSLRSWQSTGSG*FSSLIV Trigger: TACAATGAGGGAAGAAAAGCACCCAGAGCCAGTGGA...CTGCCAGCTCCTGAGGCTGCTGTAGGCTGCAGGGCACTGCCCTAGGGCATGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| CDS-3UTR CCA 90 bp | GCCACAATTCTCATCGCAGTCCCGCTTCTGAAAGAGGCGTCACAGCACAGGGGCTCCGTGTCATCCAGGTaGCTCTCTAGGAAACGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ATILIAVPLLKEASQHRGSVSSR*LSRKRS Trigger: GCTGCGTTTCCTAGAGAGCCACCTGGATGACACGGA...GCCCCTGTGCTGTGACGCCTCTTTCAGAAGCGGGACTGCGATGAGAATTGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
||
| CDS-3UTR CCA 90 bp | TCTTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCACGTTTTTCCACTGGCTCTaGGTGCTTTTCTTCCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSGTVPAVGLPVASAVVTFFHWL*VLFFPH Trigger: ATGAGGGAAGAAAAGCACCCAGAGCCAGTGGAAAAA...CGTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGTGCCAGAAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 |
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| CDS-3UTR CCA 90 bp | CTTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCACGGAGTACCAGATCTTTCTaGTCCAGTTTTGCAAAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LLALSQPWACLLPRLWSRSTRSF*SSFAKA Trigger: CGCTTTTGCAAAACTGGACCAGAAAGATCTGGTACT...CCGTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGTGCCAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR CCA 90 bp | CTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCACGGCTAGTCCTGAGTACCAGATCTTTCTaGTCCAGTTTTGCAAAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LSQPWACLLPRLWSRLVLSTRSF*SSFAKA Trigger: CGCTTTTGCAAAACTGGACCAGAAAGATCTGGTACT...CAGGACTAGCCGTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
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| CDS-3UTR CCA 90 bp | GATGCCACAATTCTCATCGCAGTCCCGCTTCTGAAAGAGGCGTCACAGCACAGGGGAGGAGTTGAGGCCTaGGCTGGGCTCAGTACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: DATILIAVPLLKEASQHRGGVEA*AGLSTL Trigger: CAGAGTACTGAGCCCAGCCCAGGCCTCAACTCCTCC...CCTGTGCTGTGACGCCTCTTTCAGAAGCGGGACTGCGATGAGAATTGTGGCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR CCA 90 bp | GATCAGTGTGGCAAAGGCCTTACGGCAGGGACAGCTATACAAGGGTTCATGGGGGGAGGAGTTGAGGCCTaGGCTGGGCTCAGTACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: DQCGKGLTAGTAIQGFMGGGVEA*AGLSTL Trigger: CAGAGTACTGAGCCCAGCCCAGGCCTCAACTCCTCC...CCCCATGAACCCTTGTATAGCTGTCCCTGCCGTAAGGCCTTTGCCACACTGATC 58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
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| CDS-3UTR CCA 90 bp | GGCAGGGACAGCTATACAAGGGTTCATGGGGAAGGGGGAGTTTCAGGAGAGGAAGCTGACATGGCCTTGTaGGAGGAGTTGAGGCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GRDSYTRVHGEGGVSGEEADMAL*EELRPG Trigger: CCCAGGCCTCAACTCCTCCCACAAGGCCATGTCAGC...TTCCTCTCCTGAAACTCCCCCTTCCCCATGAACCCTTGTATAGCTGTCCCTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
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| CDS-3UTR CCA 90 bp | CTAAAGGGAAACACTAATGATCTTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGGCTGACATGGCCTTGTaGGAGGAGTTGAGGCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LKGNTNDLLALSQPWACLADMAL*EELRPG Trigger: CCCAGGCCTCAACTCCTCCCACAAGGCCATGTCAGC...CAGGCAGGCCCACGGCTGGGACAGTGCCAGAAGATCATTAGTGTTTCCCTTTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR TCA 90 bp | ATACAAGGGTTCATGGGGAAGGGGGAGTTTCAGGAGAGGAACTGTATAGGTGGCTGTCCCGGATCTGCCTaGAGTCCCGGTACCGGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: IQGFMGKGEFQERNCIGGCPGSA*SPGTGY Trigger: GTAGCCGGTACCGGGACTTCAGGCAGATCCGGGACA...GCCACCTATACAGTTCCTCTCCTGAAACTCCCCCTTCCCCATGAACCCTTGTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
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| CDS-3UTR GCA 90 bp | GATGCCACAATTCTCATCGCAGTCCCGCTTCTGAAAGAGGCGTCACAGCACAGGATGATGTCCCGGATCTaGCTGAAGTCCCGGTACCGG | + |
|
Preference number: 4 (lower is better) Translates to: DATILIAVPLLKEASQHRMMSRI*LKSRYR Trigger: CCGGTACCGGGACTTCAGGCAGATCCGGGACATCAT...CCTGTGCTGTGACGCCTCTTTCAGAAGCGGGACTGCGATGAGAATTGTGGCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
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| CDS-3UTR GCA 90 bp | GATCAGTGTGGCAAAGGCCTTACGGCAGGGACAGCTATACAAGGGTTCATGGGGATGATGTCCCGGATCTaGCTGAAGTCCCGGTACCGG | + |
|
Preference number: 4 (lower is better) Translates to: DQCGKGLTAGTAIQGFMGMMSRI*LKSRYR Trigger: CCGGTACCGGGACTTCAGGCAGATCCGGGACATCAT...CCCCATGAACCCTTGTATAGCTGTCCCTGCCGTAAGGCCTTTGCCACACTGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
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| CDS-3UTR GCA 90 bp | CGTCACAGCACAGGGGCTACTGTTGAGAACCGTGTTCTTGTGAGTCCTGTGGCTATGCGCGACAGACACTaGATAACCCGCAGCAACCGG | + |
|
Preference number: 4 (lower is better) Translates to: RHSTGATVENRVLVSPVAMRDRH*ITRSNR Trigger: CCGGTTGCTGCGGGTTATGCAGTGTCTGTCGCGCAT...AGCCACAGGACTCACAAGAACACGGTTCTCAACAGTAGCCCCTGTGCTGTGACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
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| CDS-3UTR CCA 90 bp | GCATTCATCAATGTGGGGGCTGAGGCAGGCAGGTCCAGGGTGGTCGCAAGTAGCTGGAGGCTCTCTAAGTaGTTTTTCCACTGGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AFINVGAEAGRSRVVASSWRLSK*FFHWLW Trigger: CCAGAGCCAGTGGAAAAACCACTTAGAGAGCCTCCA...GCTACTTGCGACCACCCTGGACCTGCCTGCCTCAGCCCCCACATTGATGAATGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
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| CDS-3UTR CCA 90 bp | GATCAGTGTGGCAAAGGCCTTACGGCAGGGACAGCTATACAAGGGTTCATGGGGGATCCCGATGGTGGCTaGAGGGTTCTGAGGCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: DQCGKGLTAGTAIQGFMGDPDGG*RVLRLS Trigger: AGACAGCCTCAGAACCCTCCAGCCACCATCGGGATC...CCCCATGAACCCTTGTATAGCTGTCCCTGCCGTAAGGCCTTTGCCACACTGATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
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| CDS-3UTR CCA 90 bp | CTGTCACATTGTCACTCCCTGCTCCAGTCTCATCCTAGCAGTCTGAGCAAGCCTTCATGGGACTGTTCCTaGGCTGCCGGTCTGAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSHCHSLLQSHPSSLSKPSWDCS*AAGLSL Trigger: GAGGCTCAGACCGGCAGCCCAGGAACAGTCCCATGA...AGGCTTGCTCAGACTGCTAGGATGAGACTGGAGCAGGGAGTGACAATGTGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
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| CDS-3UTR CCA 90 bp | CGTCACAGCACAGGGGCTACTGTTGAGAACCGTGTTCTTGTGAGTCCTGTGGCTCTGGGCTCAGTACTCTaGCTGTCCTCCTCCAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: RHSTGATVENRVLVSPVALGSVL*LSSSNS Trigger: GCTGTTGGAGGAGGACAGCCAGAGTACTGAGCCCAG...AGCCACAGGACTCACAAGAACACGGTTCTCAACAGTAGCCCCTGTGCTGTGACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR CCA 90 bp | CTAAAGGGAAACACTAATGATCTTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGTTCTTCTCCCCCGGGTaGGGTTGGTTGAGAGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKGNTNDLLALSQPWACLFFSPG*GWLRAL Trigger: CAGAGCTCTCAACCAACCCCACCCGGGGGAGAAGAA...CAGGCAGGCCCACGGCTGGGACAGTGCCAGAAGATCATTAGTGTTTCCCTTTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
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| CDS-3UTR CCA 90 bp | GATGCCACAATTCTCATCGCAGTCCCGCTTCTGAAAGAGGCGTCACAGCACAGGTTCTTCTCCCCCGGGTaGGGTTGGTTGAGAGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: DATILIAVPLLKEASQHRFFSPG*GWLRAL Trigger: CAGAGCTCTCAACCAACCCCACCCGGGGGAGAAGAA...CCTGTGCTGTGACGCCTCTTTCAGAAGCGGGACTGCGATGAGAATTGTGGCATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR CCA 90 bp | TCATCAATGTGGGGGCTGAGGCAGGCAGGTCCAGGGTGGTCGCAAGTAGCTGAATGTCTTTGGATGCTTTaGGCTTCTTCTCCCCCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSMWGLRQAGPGWSQVAECLWML*ASSPPG Trigger: ACCCGGGGGAGAAGAAGCCCAAAGCATCCAAAGACA...TTCAGCTACTTGCGACCACCCTGGACCTGCCTGCCTCAGCCCCCACATTGATGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
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| CDS-3UTR CCA 90 bp | TCTTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCACGACTCGCTTTCTTCTATaGTCCACTTCTGCTTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSGTVPAVGLPVASAVVTTRFLL*STSAFL Trigger: CAAGAAAGCAGAAGTGGACCATAGAAGAAAGCGAGT...CGTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGTGCCAGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 |
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| CDS-3UTR TCA 90 bp | GCCACAATTCTCATCGCAGTCCCGCTTCTGAAAGAGGCGTCACAGCACAGGGGCCAGCACATTGATAGCTaGTTCCAAGGGTGTGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ATILIAVPLLKEASQHRGQHIDS*FQGCEL Trigger: GAGCTCACACCCTTGGAATCAGCTATCAATGTGCTG...GCCCCTGTGCTGTGACGCCTCTTTCAGAAGCGGGACTGCGATGAGAATTGTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
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| CDS-3UTR TCA 90 bp | GGGGCTACTGTTGAGAACCGTGTTCTTGTGAGTCCTGTGGCTACGAAACCCTTTGTGGCTGGAGGGTTCTaGGGCTGTCTTGGAGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GATVENRVLVSPVATKPFVAGGF*GCLGGS Trigger: AGAGCCTCCAAGACAGCCTCAGAACCCTCCAGCCAC...AAAGGGTTTCGTAGCCACAGGACTCACAAGAACACGGTTCTCAACAGTAGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068388.15 ENSMUST00000133925.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAAGGGGCGGCTAAGCTTATCTACAATCACCATTTAACCAAACACCACTTGCCCCGCCCTCCCGACTaGGCCGTTTCCTTGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: REGAAKLIYNHHLTKHHLPRPPD*AVSLAV Trigger: CACAGCCAAGGAAACGGCCCAGTCGGGAGGGCGGGG...CAAGTGGTGTTTGGTTAAATGGTGATTGTAGATAAGCTTAGCCGCCCCTTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR CCA 90 bp | AGGCAGACGGCTCAGAACCCTTTCCTGCTTACTCATGCCCTAGGGCAGTGCCCTCTGAGGCTGTCTGCTTaGAGGCTCTCTAAGTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RQTAQNPFLLTHALGQCPLRLSA*RLSKWF Trigger: AAACCACTTAGAGAGCCTCCAAGCAGACAGCCTCAG...AGGGCACTGCCCTAGGGCATGAGTAAGCAGGAAAGGGTTCTGAGCCGTCTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| CDS-3UTR CCA 90 bp | ACAGGGGCTACTGTTGAGAACCGTGTTCTTGTGAGTCCTGTGGCTACGAAACCCGATCCCGATGGTGGCTaGAGGGTTCTGAGGCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TGATVENRVLVSPVATKPDPDGG*RVLRLS Trigger: AGACAGCCTCAGAACCCTCCAGCCACCATCGGGATC...GGGTTTCGTAGCCACAGGACTCACAAGAACACGGTTCTCAACAGTAGCCCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGCCTCAGGAGCTGGCAGGGACTGTCACATTGTCACTCCCTGCTCCAGTCTATCTGCTTATTGTCATaGGACTGTTCCTGGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSLRSWQGLSHCHSLLQSICLLS*DCSWAA Trigger: GGCAGCCCAGGAACAGTCCCATGACAATAAGCAGAT...AGACTGGAGCAGGGAGTGACAATGTGACAGTCCCTGCCAGCTCCTGAGGCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| CDS-3UTR CCA 90 bp | GATCTTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCATGTTCCACTTGTCTTTaGATGCTTTGGGCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DLLALSQPWACLLPRLWSCSTCL*MLWASS Trigger: AGAAGAAGCCCAAAGCATCCAAAGACAAGTGGAACA...TGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGTGCCAGAAGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR CCA 90 bp | GATCTTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCAGCTTTCTTGTTAAACTaGATGACCTGTCTTCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: DLLALSQPWACLLPRLWSAFLLN*MTCLHL Trigger: CAGGTGAAGACAGGTCATCCAGTTTAACAAGAAAGC...TGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGTGCCAGAAGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR CCA 90 bp | TCTTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCACGTGTTCCACTTGTCTTTaGATGCTTTGGGATTCACTA | + |
|
Preference number: 4 (lower is better) Translates to: SSGTVPAVGLPVASAVVTCSTCL*MLWDSL Trigger: TAGTGAATCCCAAAGCATCCAAAGACAAGTGGAACA...CGTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGTGCCAGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068388.15 |
||
| CDS-3UTR TCA 90 bp | AGGGAAACACTAATGATCTTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGTTGCCAGCACATTGATAGCTaGTTCCAAGGGTGTGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RETLMIFWHCPSRGPACCQHIDS*FQGCEL Trigger: GAGCTCACACCCTTGGAATCAGCTATCAATGTGCTG...GCAACAGGCAGGCCCACGGCTGGGACAGTGCCAGAAGATCATTAGTGTTTCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
||
| CDS-3UTR GCA 90 bp | TTTTTGCTAAAAAGACAGTCTGTAAGGGTGTCTGAGAGACAGCAAGCACAACACGCCCGCTGCTATCGCTaGTCCCGCCTCCTCCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FLLKRQSVRVSERQQAQHARCYR*SRLLPP Trigger: TGGCGGGAGGAGGCGGGAGCAGCGATAGCAGCGGGC...GTGTTGTGCTTGCTGTCTCTCAGACACCCTTACAGACTGTCTTTTTAGCAAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR GCA 90 bp | ACAGAGCTCTTTTGTACTGAAACTCAACGAGGATTAAATTCATTCCCGGTAACGTCGCCGCCCGCCCGCTaGTATCGCTGCTCCCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TELFCTETQRGLNSFPVTSPPAR*YRCSRL Trigger: GAGGCGGGAGCAGCGATAGCAGCGGGCGGGCGGCGA...CGTTACCGGGAATGAATTTAATCCTCGTTGAGTTTCAGTACAAAAGAGCTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR GCA 90 bp | TCATCAATGTGGGGGCTGAGGCAGGCAGGTCCAGGGTGGTCGCAAGTAGCTGAAACCCTCAGCAGGAGCTaGGCTTTCATGTTCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSMWGLRQAGPGWSQVAETLSRS*AFMFIF Trigger: AAAGATGAACATGAAAGCGCAGCTCCTGCTGAGGGT...TTCAGCTACTTGCGACCACCCTGGACCTGCCTGCCTCAGCCCCCACATTGATGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR GCA 90 bp | TCTTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCACGTCTATGGTCCACTTCTaGTTTCTTGTTAAACTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSGTVPAVGLPVASAVVTSMVHF*FLVKLD Trigger: ATCCAGTTTAACAAGAAAGCAGAAGTGGACCATAGA...CGTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGTGCCAGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR CCA 90 bp | ACATCAGGTGAGCTAGTAACTTTTCTGTGCCTTCCTCATCTATACGATAGGGCTCCCCGCCCTCCCGACTaGGCCGTTTCCTTGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TSGELVTFLCLPHLYDRAPRPPD*AVSLAV Trigger: CACAGCCAAGGAAACGGCCCAGTCGGGAGGGCGGGG...AGCCCTATCGTATAGATGAGGAAGGCACAGAAAAGTTACTAGCTCACCTGATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| CDS-3UTR CCA 90 bp | GCATTCATCAATGTGGGGGCTGAGGCAGGCAGGTCCAGGGTGGTCGCAAGTAGCCATGTTCATCTTTCCTaGGTCTCTTGTGTTTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AFINVGAEAGRSRVVASSHVHLS*VSCVCG Trigger: CCCACAAACACAAGAGACCCAGGAAAGATGAACATG...GCTACTTGCGACCACCCTGGACCTGCCTGCCTCAGCCCCCACATTGATGAATGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| 3UTR CAA 72 bp | CTGTTGCCTCGGCTGTGGTCACGGCTAGTCCTGGCTTaGCTTTTTAGCTCCATGATCTCCAGCAACAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LLPRLWSRLVLA*LFSSMISSNSD Trigger: GTCACTGTTGCTGGAGATCATGGAGCTAAAAAGCAAAGCCAGGACTAGCCGTGACCACAGCCGAGGCAACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
||
| 3UTR CAA 72 bp | CATGATACACAACAGTGTGTAGAGACGGCAATGGCCTaGGGAGATCAGTGTGGCAAAGGCCTTACGGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HDTQQCVETAMA*GDQCGKGLTAG Trigger: CCCTGCCGTAAGGCCTTTGCCACACTGATCTCCCAAGGCCATTGCCGTCTCTACACACTGTTGTGTATCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| CDS-3UTR TCA 90 bp | CACAATTCTCATCGCAGTCCCGCTTCTGAAAGAGGCGTCACAGCACAGGGGCTACTGATTCCAAGGGTGTaGGCTCAGCCTCCATATCAA | + |
|
Preference number: 4 (lower is better) Translates to: HNSHRSPASERGVTAQGLLIPRV*AQPPYQ Trigger: TTGATATGGAGGCTGAGCTCACACCCTTGGAATCAG...TAGCCCCTGTGCTGTGACGCCTCTTTCAGAAGCGGGACTGCGATGAGAATTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
||
| CDS-3UTR TCA 90 bp | CGGCTGTGGTCACGGCTAGTCCTGGCTTTGCTTTTTAGCTCCATGATCTCCAGCTCAGTTCTCAGCTTCTaGGTTGTGGGGTCCTTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RLWSRLVLALLFSSMISSSVLSF*VVGSLD Trigger: GTCTAAGGACCCCACAACTCAGAAGCTGAGAACTGA...GCTGGAGATCATGGAGCTAAAAAGCAAAGCCAGGACTAGCCGTGACCACAGCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
||
| CDS-3UTR TCA 90 bp | CGTCACAGCACAGGGGCTACTGTTGAGAACCGTGTTCTTGTGAGTCCTGTGGCTTCAGTTCTCAGCTTCTaGGTTGTGGGGTCCTTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RHSTGATVENRVLVSPVASVLSF*VVGSLD Trigger: GTCTAAGGACCCCACAACTCAGAAGCTGAGAACTGA...AGCCACAGGACTCACAAGAACACGGTTCTCAACAGTAGCCCCTGTGCTGTGACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
||
| CDS-3UTR CCA 90 bp | GGGGCTACTGTTGAGAACCGTGTTCTTGTGAGTCCTGTGGCTACGAAACCCTTTTCCGTGTCATCCAGGTaGCTCTCTAGGAAACGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GATVENRVLVSPVATKPFSVSSR*LSRKRS Trigger: GCTGCGTTTCCTAGAGAGCCACCTGGATGACACGGA...AAAGGGTTTCGTAGCCACAGGACTCACAAGAACACGGTTCTCAACAGTAGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
||
| CDS-3UTR CCA 90 bp | GGACTGAGAGGAGGTGCACAGCGGGAGAAACAAACAGTATGTTCTGAGAGCACATCCGTGTCATCCAGGTaGCTCTCTAGGAAACGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLRGGAQREKQTVCSESTSVSSR*LSRKRS Trigger: GCTGCGTTTCCTAGAGAGCCACCTGGATGACACGGA...TGTGCTCTCAGAACATACTGTTTGTTTCTCCCGCTGTGCACCTCCTCTCAGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| CDS-3UTR CCA 90 bp | CCTTGGACTTGCTGTGACTTTCCTGCTTGTTTCCCGGGTGCTGGCATTATAAGGTCCGTGTCATCCAGGTaGCTCTCTAGGAAACGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PWTCCDFPACFPGAGIIRSVSSR*LSRKRS Trigger: GCTGCGTTTCCTAGAGAGCCACCTGGATGACACGGA...CCTTATAATGCCAGCACCCGGGAAACAAGCAGGAAAGTCACAGCAAGTCCAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142616.8 |
||
| CDS-3UTR CCA 90 bp | AACCCTTTCCTGCTTACTCATGCCCTAGGGCAGTGCCCTGCAGCCTACAGCAGCTTTTTCCACTGGCTCTaGGTGCTTTTCTTCCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: NPFLLTHALGQCPAAYSSFFHWL*VLFFPH Trigger: ATGAGGGAAGAAAAGCACCCAGAGCCAGTGGAAAAA...GCTGCTGTAGGCTGCAGGGCACTGCCCTAGGGCATGAGTAAGCAGGAAAGGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| CDS-3UTR CCA 90 bp | GGCAGGGACAGCTATACAAGGGTTCATGGGGAAGGGGGAGTTTCAGGAGAGGAATGGAGGCTCTCTAAGTaGTTTTTCCACTGGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRDSYTRVHGEGGVSGEEWRLSK*FFHWLW Trigger: CCAGAGCCAGTGGAAAAACCACTTAGAGAGCCTCCA...TTCCTCTCCTGAAACTCCCCCTTCCCCATGAACCCTTGTATAGCTGTCCCTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| CDS-3UTR CCA 90 bp | CTAAAGGGAAACACTAATGATCTTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGCTGAGGCTGTCTGCTTaGAGGCTCTCTAAGTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LKGNTNDLLALSQPWACLLRLSA*RLSKWF Trigger: AAACCACTTAGAGAGCCTCCAAGCAGACAGCCTCAG...CAGGCAGGCCCACGGCTGGGACAGTGCCAGAAGATCATTAGTGTTTCCCTTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068421.13 |
||
| CDS-3UTR CCA 90 bp | CACAATTCTCATCGCAGTCCCGCTTCTGAAAGAGGCGTCACAGCACAGGGGCTAATCTGCTTATTGTCATaGGACTGTTCCTGGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: HNSHRSPASERGVTAQGLICLLS*DCSWAA Trigger: GGCAGCCCAGGAACAGTCCCATGACAATAAGCAGAT...TAGCCCCTGTGCTGTGACGCCTCTTTCAGAAGCGGGACTGCGATGAGAATTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR GCA 90 bp | CGGCTGTGGTCACGGCTAGTCCTGGCTTTGCTTTTTAGCTCCATGATCTCCAGCTCCACTGGCTCTGGGTaGTTTTCTTCCCTCATTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RLWSRLVLALLFSSMISSSTGSG*FSSLIV Trigger: TACAATGAGGGAAGAAAAGCACCCAGAGCCAGTGGA...GCTGGAGATCATGGAGCTAAAAAGCAAAGCCAGGACTAGCCGTGACCACAGCCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR GCA 90 bp | GATCAGTGTGGCAAAGGCCTTACGGCAGGGACAGCTATACAAGGGTTCATGGGGACCCTCAGCAGGAGCTaGGCTTTCATGTTCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: DQCGKGLTAGTAIQGFMGTLSRS*AFMFIF Trigger: AAAGATGAACATGAAAGCGCAGCTCCTGCTGAGGGT...CCCCATGAACCCTTGTATAGCTGTCCCTGCCGTAAGGCCTTTGCCACACTGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| CDS-3UTR GCA 90 bp | ACAGGGGCTACTGTTGAGAACCGTGTTCTTGTGAGTCCTGTGGCTACGAAACCCCCACTTGTCTTTGGATaGTTTGGGCTTCTTCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TGATVENRVLVSPVATKPPLVFG*FGLLLP Trigger: GGGGAGAAGAAGCCCAAAGCATCCAAAGACAAGTGG...GGGTTTCGTAGCCACAGGACTCACAAGAACACGGTTCTCAACAGTAGCCCCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAAACACTAATGATCTTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGTTGCAAGTGGTTTTTCCACTaGCTCTGGGTGCTTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RETLMIFWHCPSRGPACCKWFFH*LWVLFF Trigger: GAAGAAAAGCACCCAGAGCCAGTGGAAAAACCACTT...GCAACAGGCAGGCCCACGGCTGGGACAGTGCCAGAAGATCATTAGTGTTTCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR CCA 90 bp | AGGCAGACGGCTCAGAACCCTTTCCTGCTTACTCATGCCCTAGGGCAGTGCCCTAGTACCAGATCTTTCTaGTCCAGTTTTGCAAAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: RQTAQNPFLLTHALGQCPSTRSF*SSFAKA Trigger: CGCTTTTGCAAAACTGGACCAGAAAGATCTGGTACT...AGGGCACTGCCCTAGGGCATGAGTAAGCAGGAAAGGGTTCTGAGCCGTCTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| CDS-3UTR TCA 90 bp | ATACAAGGGTTCATGGGGAAGGGGGAGTTTCAGGAGAGGAACTGTATAGGTGGCCAGCACATTGATAGCTaGTTCCAAGGGTGTGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: IQGFMGKGEFQERNCIGGQHIDS*FQGCEL Trigger: GAGCTCACACCCTTGGAATCAGCTATCAATGTGCTG...GCCACCTATACAGTTCCTCTCCTGAAACTCCCCCTTCCCCATGAACCCTTGTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| CDS-3UTR TCA 90 bp | GGGGCTACTGTTGAGAACCGTGTTCTTGTGAGTCCTGTGGCTACGAAACCCTTTTCAGTTCTCAGCTTCTaGGTTGTGGGGTCCTTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GATVENRVLVSPVATKPFSVLSF*VVGSLD Trigger: GTCTAAGGACCCCACAACTCAGAAGCTGAGAACTGA...AAAGGGTTTCGTAGCCACAGGACTCACAAGAACACGGTTCTCAACAGTAGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
||
| CDS-3UTR GCA 90 bp | AAGAGTACACCCAATGCAAGGAAGCCATGTTATCACATGCCAAGGCCTTTCACAATGCGCGACAGACACTaGATAACCCGCAGCAACCGG | + |
|
Preference number: 4 (lower is better) Translates to: KSTPNARKPCYHMPRPFTMRDRH*ITRSNR Trigger: CCGGTTGCTGCGGGTTATGCAGTGTCTGTCGCGCAT...TGTGAAAGGCCTTGGCATGTGATAACATGGCTTCCTTGCATTGGGTGTACTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| CDS-3UTR CCA 90 bp | CTCTTTTGTACTGAAACTCAACGAGGATTAAATTCATTCCCGGTAACGTTCACACCCCGCCCTCCCGACTaGGCCGTTTCCTTGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LFCTETQRGLNSFPVTFTPRPPD*AVSLAV Trigger: CACAGCCAAGGAAACGGCCCAGTCGGGAGGGCGGGG...TGTGAACGTTACCGGGAATGAATTTAATCCTCGTTGAGTTTCAGTACAAAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR CCA 90 bp | CACAATTCTCATCGCAGTCCCGCTTCTGAAAGAGGCGTCACAGCACAGGGGCTATTTTTCCACTGGCTCTaGGTGCTTTTCTTCCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: HNSHRSPASERGVTAQGLFFHWL*VLFFPH Trigger: ATGAGGGAAGAAAAGCACCCAGAGCCAGTGGAAAAA...TAGCCCCTGTGCTGTGACGCCTCTTTCAGAAGCGGGACTGCGATGAGAATTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR CCA 90 bp | GATCAGTGTGGCAAAGGCCTTACGGCAGGGACAGCTATACAAGGGTTCATGGGGAAGTGGTTTTTCCACTaGCTCTGGGTGCTTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DQCGKGLTAGTAIQGFMGKWFFH*LWVLFF Trigger: GAAGAAAAGCACCCAGAGCCAGTGGAAAAACCACTT...CCCCATGAACCCTTGTATAGCTGTCCCTGCCGTAAGGCCTTTGCCACACTGATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| CDS-3UTR CCA 90 bp | GGGGCTACTGTTGAGAACCGTGTTCTTGTGAGTCCTGTGGCTACGAAACCCTTTTGGAGGCTCTCTAAGTaGTTTTTCCACTGGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GATVENRVLVSPVATKPFWRLSK*FFHWLW Trigger: CCAGAGCCAGTGGAAAAACCACTTAGAGAGCCTCCA...AAAGGGTTTCGTAGCCACAGGACTCACAAGAACACGGTTCTCAACAGTAGCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR CCA 90 bp | GATCAGTGTGGCAAAGGCCTTACGGCAGGGACAGCTATACAAGGGTTCATGGGGCATGTTCATCTTTCCTaGGTCTCTTGTGTTTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: DQCGKGLTAGTAIQGFMGHVHLS*VSCVCG Trigger: CCCACAAACACAAGAGACCCAGGAAAGATGAACATG...CCCCATGAACCCTTGTATAGCTGTCCCTGCCGTAAGGCCTTTGCCACACTGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| CDS-3UTR CCA 90 bp | CACTGTCCTACAGCAGCTAGCAGAACATGGAAGATTGGGAGATCTTTGCTGAATTTCTTCTCCCCCGGGTaGGGTTGGTTGAGAGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HCPTAASRTWKIGRSLLNFFSPG*GWLRAL Trigger: CAGAGCTCTCAACCAACCCCACCCGGGGGAGAAGAA...ATTCAGCAAAGATCTCCCAATCTTCCATGTTCTGCTAGCTGCTGTAGGACAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| CDS-3UTR CCA 90 bp | ACAGGGGCTACTGTTGAGAACCGTGTTCTTGTGAGTCCTGTGGCTACGAAACCCCCAGCCAGATCTTTCTaGTCCAGTTTTGCAAAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: TGATVENRVLVSPVATKPPARSF*SSFAKA Trigger: CGCTTTTGCAAAACTGGACCAGAAAGATCTGGCTGG...GGGTTTCGTAGCCACAGGACTCACAAGAACACGGTTCTCAACAGTAGCCCCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000068388.15 |
||
| CDS-3UTR TCA 90 bp | ACAGAGCTCTTTTGTACTGAAACTCAACGAGGATTAAATTCATTCCCGGTAACGTGTCCCGGATCTGCCTaGAGTCCCGGTACCGGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: TELFCTETQRGLNSFPVTCPGSA*SPGTGY Trigger: GTAGCCGGTACCGGGACTTCAGGCAGATCCGGGACA...CGTTACCGGGAATGAATTTAATCCTCGTTGAGTTTCAGTACAAAAGAGCTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
||
| CDS-3UTR TCA 90 bp | TTTCTGAATGTAAGAGTACACCCAATGCAAGGAAGCCATGTTATCACATGCCAACCGGGTGGGGTTGGTTaGGAGCTCTGGGCTTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: FLNVRVHPMQGSHVITCQPGGVG*ELWAWM Trigger: CATCCAAGCCCAGAGCTCTCAACCAACCCCACCCGG...TTGGCATGTGATAACATGGCTTCCTTGCATTGGGTGTACTCTTACATTCAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| CDS-3UTR CCA 90 bp | CTAAAGGGAAACACTAATGATCTTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGTGTTCCACTTGTCTTTaGATGCTTTGGGCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LKGNTNDLLALSQPWACLCSTCL*MLWASS Trigger: AGAAGAAGCCCAAAGCATCCAAAGACAAGTGGAACA...CAGGCAGGCCCACGGCTGGGACAGTGCCAGAAGATCATTAGTGTTTCCCTTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR CCA 90 bp | CGTCACAGCACAGGGGCTACTGTTGAGAACCGTGTTCTTGTGAGTCCTGTGGCTGCTTTCTTGTTAAACTaGATGACCTGTCTTCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: RHSTGATVENRVLVSPVAAFLLN*MTCLHL Trigger: CAGGTGAAGACAGGTCATCCAGTTTAACAAGAAAGC...AGCCACAGGACTCACAAGAACACGGTTCTCAACAGTAGCCCCTGTGCTGTGACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR CCA 90 bp | CTAAAGGGAAACACTAATGATCTTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGACTCGCTTTCTTCTATaGTCCACTTCTGCTTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LKGNTNDLLALSQPWACLTRFLL*STSAFL Trigger: CAAGAAAGCAGAAGTGGACCATAGAAGAAAGCGAGT...CAGGCAGGCCCACGGCTGGGACAGTGCCAGAAGATCATTAGTGTTTCCCTTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| 3UTR CAA 72 bp | CTTTTAGAAATGGCAGCCCAGTTTCCTTCCCCGTATTaGCGCACTCCATCCTTCACCCACTCGCTTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLEMAAQFPSPY*RTPSFTHSLSS Trigger: AGAAGAAAGCGAGTGGGTGAAGGATGGAGTGCGCAAATACGGGGAAGGAAACTGGGCTGCCATTTCTAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142616.8 |
||
| CDS-3UTR TCA 90 bp | GTCTTTGGATGCTCAGATCTTTCTGGTCCAGTTTTGCAAAAGCGGCCTCTGAGTTCAGTTCTCAGCTTCTaGGTTGTGGGGTCCTTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: VFGCSDLSGPVLQKRPLSSVLSF*VVGSLD Trigger: GTCTAAGGACCCCACAACTCAGAAGCTGAGAACTGA...ACTCAGAGGCCGCTTTTGCAAAACTGGACCAGAAAGATCTGAGCATCCAAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000142616.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCTATACAAGGGTTCATGGGGAAGGGGGAGTTTCAGGAGAGGAACTGTATAGGTCTCTTGTGTTTGTaGGCTGGTGATGATGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TAIQGFMGKGEFQERNCIGLLCL*AGDDGD Trigger: ATCCCCATCATCACCAGCCCACAAACACAAGAGACC...TATACAGTTCCTCTCCTGAAACTCCCCCTTCCCCATGAACCCTTGTATAGCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| CDS-3UTR CCA 90 bp | GGGGCTACTGTTGAGAACCGTGTTCTTGTGAGTCCTGTGGCTACGAAACCCTTTCATGTTCATCTTTCCTaGGTCTCTTGTGTTTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GATVENRVLVSPVATKPFHVHLS*VSCVCG Trigger: CCCACAAACACAAGAGACCCAGGAAAGATGAACATG...AAAGGGTTTCGTAGCCACAGGACTCACAAGAACACGGTTCTCAACAGTAGCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| 3UTR CAA 72 bp | AAGCTTATCTACAATCACCATTTAACCAAACACCACTaGTCCGACCCCGACCCCGTGAGAAGTGTGGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KLIYNHHLTKHH*SDPDPVRSVVD Trigger: ATCCACCACACTTCTCACGGGGTCGGGGTCGGACAAGTGGTGTTTGGTTAAATGGTGATTGTAGATAAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
||
| 3UTR CAA 72 bp | CCCACTCGCTTTCTTCTATGGTCCACTTCTGCTTTCTaGTTAAACTGGATGACCTGTCTTCACCTGGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PTRFLLWSTSAF*LNWMTCLHLVP Trigger: AGGCACCAGGTGAAGACAGGTCATCCAGTTTAACAAGAAAGCAGAAGTGGACCATAGAAGAAAGCGAGTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142616.8 |
||
| CDS-3UTR TCA 90 bp | CACTGTCCTACAGCAGCTAGCAGAACATGGAAGATTGGGAGATCTTTGCTGAATCTGATTCCAAGGGTGTaGGCTCAGCCTCCATATCAA | + |
|
Preference number: 4 (lower is better) Translates to: HCPTAASRTWKIGRSLLNLIPRV*AQPPYQ Trigger: TTGATATGGAGGCTGAGCTCACACCCTTGGAATCAG...ATTCAGCAAAGATCTCCCAATCTTCCATGTTCTGCTAGCTGCTGTAGGACAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| CDS-3UTR GCA 90 bp | ACAGAGCTCTTTTGTACTGAAACTCAACGAGGATTAAATTCATTCCCGGTAACGATGCGCGACAGACACTaGATAACCCGCAGCAACCGG | + |
|
Preference number: 4 (lower is better) Translates to: TELFCTETQRGLNSFPVTMRDRH*ITRSNR Trigger: CCGGTTGCTGCGGGTTATGCAGTGTCTGTCGCGCAT...CGTTACCGGGAATGAATTTAATCCTCGTTGAGTTTCAGTACAAAAGAGCTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
||
| CDS-3UTR GCA 90 bp | CGGCTGTGGTCACGGCTAGTCCTGGCTTTGCTTTTTAGCTCCATGATCTCCAGCTCTATGGTCCACTTCTaGTTTCTTGTTAAACTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RLWSRLVLALLFSSMISSSMVHF*FLVKLD Trigger: ATCCAGTTTAACAAGAAAGCAGAAGTGGACCATAGA...GCTGGAGATCATGGAGCTAAAAAGCAAAGCCAGGACTAGCCGTGACCACAGCCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR GCA 90 bp | GGGGCTACTGTTGAGAACCGTGTTCTTGTGAGTCCTGTGGCTACGAAACCCTTTCCACTTGTCTTTGGATaGTTTGGGATTCACTACACA | + |
|
Preference number: 4 (lower is better) Translates to: GATVENRVLVSPVATKPFPLVFG*FGIHYT Trigger: TGTGTAGTGAATCCCAAAGCATCCAAAGACAAGTGG...AAAGGGTTTCGTAGCCACAGGACTCACAAGAACACGGTTCTCAACAGTAGCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068388.15 |
||
| CDS-3UTR CCA 90 bp | ACAGAGCTCTTTTGTACTGAAACTCAACGAGGATTAAATTCATTCCCGGTAACGGATCCCGATGGTGGCTaGAGGGTTCTGAGGCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TELFCTETQRGLNSFPVTDPDGG*RVLRLS Trigger: AGACAGCCTCAGAACCCTCCAGCCACCATCGGGATC...CGTTACCGGGAATGAATTTAATCCTCGTTGAGTTTCAGTACAAAAGAGCTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR CCA 90 bp | ACATCAGGTGAGCTAGTAACTTTTCTGTGCCTTCCTCATCTATACGATAGGGCTGAAGGTCTTCATACTTaGGCTTCTTCTCCCCCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TSGELVTFLCLPHLYDRAEGLHT*ASSPPG Trigger: ACCCGGGGGAGAAGAAGCCCAAGTATGAAGACCTTC...AGCCCTATCGTATAGATGAGGAAGGCACAGAAAAGTTACTAGCTCACCTGATGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| CDS-3UTR TCA 90 bp | TTTTGTACTGAAACTCAACGAGGATTAAATTCATTCCCGGTAACGTTCACATTTTGTCCCGGATCTGCCTaGAGTCCCGGTACCGGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: FCTETQRGLNSFPVTFTFCPGSA*SPGTGY Trigger: GTAGCCGGTACCGGGACTTCAGGCAGATCCGGGACA...AAATGTGAACGTTACCGGGAATGAATTTAATCCTCGTTGAGTTTCAGTACAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
||
| CDS-3UTR CCA 90 bp | TTTTGTACTGAAACTCAACGAGGATTAAATTCATTCCCGGTAACGTTCACATTTTCATGGGACTGTTCCTaGGCTGCCGGTCTGAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FCTETQRGLNSFPVTFTFSWDCS*AAGLSL Trigger: GAGGCTCAGACCGGCAGCCCAGGAACAGTCCCATGA...AAATGTGAACGTTACCGGGAATGAATTTAATCCTCGTTGAGTTTCAGTACAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| 3UTR CAA 72 bp | ACTTCCTTTTCTTCAAGCCCGTTAGGGCTGTTCCACTaGTCTTTGGATGCTCAGATCTTTCTGGTCCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TSFSSSPLGLFH*SLDAQIFLVQF Trigger: AAACTGGACCAGAAAGATCTGAGCATCCAAAGACAAGTGGAACAGCCCTAACGGGCTTGAAGAAAAGGAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142616.8 |
||
| CDS-3UTR TCA 90 bp | TTTCTGAATGTAAGAGTACACCCAATGCAAGGAAGCCATGTTATCACATGCCAATCAGTTCTCAGCTTCTaGGTTGTGGGGTCCTTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: FLNVRVHPMQGSHVITCQSVLSF*VVGSLD Trigger: GTCTAAGGACCCCACAACTCAGAAGCTGAGAACTGA...TTGGCATGTGATAACATGGCTTCCTTGCATTGGGTGTACTCTTACATTCAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| CDS-3UTR GCA 90 bp | TTTTTGCTAAAAAGACAGTCTGTAAGGGTGTCTGAGAGACAGCAAGCACAACACACCCTCAGCAGGAGCTaGGCTTTCATGTTCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FLLKRQSVRVSERQQAQHTLSRS*AFMFIF Trigger: AAAGATGAACATGAAAGCGCAGCTCCTGCTGAGGGT...GTGTTGTGCTTGCTGTCTCTCAGACACCCTTACAGACTGTCTTTTTAGCAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR CCA 90 bp | ACAGAGCTCTTTTGTACTGAAACTCAACGAGGATTAAATTCATTCCCGGTAACGTGGAGGCTCTCTAAGTaGTTTTTCCACTGGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TELFCTETQRGLNSFPVTWRLSK*FFHWLW Trigger: CCAGAGCCAGTGGAAAAACCACTTAGAGAGCCTCCA...CGTTACCGGGAATGAATTTAATCCTCGTTGAGTTTCAGTACAAAAGAGCTCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 |
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| 3UTR CAA 72 bp | ACAGCAGCTAGCAGAACATGGAAGATTGGGAGATCTTaGCTGAATTTGCTGGGTCTCAAATGCTCAAAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: TAASRTWKIGRS*LNLLGLKCSKV Trigger: TACCTTTGAGCATTTGAGACCCAGCAAATTCAGCAAAGATCTCCCAATCTTCCATGTTCTGCTAGCTGCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| CDS-3UTR TCA 90 bp | CTCTTTTGTACTGAAACTCAACGAGGATTAAATTCATTCCCGGTAACGTTCACACTGATTCCAAGGGTGTaGGCTCAGCCTCCATATCAA | + |
|
Preference number: 4 (lower is better) Translates to: LFCTETQRGLNSFPVTFTLIPRV*AQPPYQ Trigger: TTGATATGGAGGCTGAGCTCACACCCTTGGAATCAG...TGTGAACGTTACCGGGAATGAATTTAATCCTCGTTGAGTTTCAGTACAAAAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
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| CDS-3UTR CCA 90 bp | TTTTTGCTAAAAAGACAGTCTGTAAGGGTGTCTGAGAGACAGCAAGCACAACACTTTTTCCACTGGCTCTaGGTGCTTTTCTTCCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FLLKRQSVRVSERQQAQHFFHWL*VLFFPH Trigger: ATGAGGGAAGAAAAGCACCCAGAGCCAGTGGAAAAA...GTGTTGTGCTTGCTGTCTCTCAGACACCCTTACAGACTGTCTTTTTAGCAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR TCA 90 bp | TTTTGTACTGAAACTCAACGAGGATTAAATTCATTCCCGGTAACGTTCACATTTTCTTCACCTGGTGCCTaGACTTCAAACAGCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FCTETQRGLNSFPVTFTFSSPGA*TSNSWS Trigger: GGACCAGCTGTTTGAAGTTCAGGCACCAGGTGAAGA...AAATGTGAACGTTACCGGGAATGAATTTAATCCTCGTTGAGTTTCAGTACAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR TCA 90 bp | TTTTGTACTGAAACTCAACGAGGATTAAATTCATTCCCGGTAACGTTCACATTTCTGATTCCAAGGGTGTaGGCTCAGCCTCCATATCAA | + |
|
Preference number: 4 (lower is better) Translates to: FCTETQRGLNSFPVTFTFLIPRV*AQPPYQ Trigger: TTGATATGGAGGCTGAGCTCACACCCTTGGAATCAG...AAATGTGAACGTTACCGGGAATGAATTTAATCCTCGTTGAGTTTCAGTACAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
||
| CDS-3UTR CCA 90 bp | TTTTGTACTGAAACTCAACGAGGATTAAATTCATTCCCGGTAACGTTCACATTTGTTCTGAGGCTGTCTTaGAGGCTCTCTAAGTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FCTETQRGLNSFPVTFTFVLRLS*RLSKWF Trigger: AAACCACTTAGAGAGCCTCCAAGACAGCCTCAGAAC...AAATGTGAACGTTACCGGGAATGAATTTAATCCTCGTTGAGTTTCAGTACAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068388.15 ENSMUST00000133925.8 |
||
| CDS-3UTR GCA 90 bp | CTCTTTTGTACTGAAACTCAACGAGGATTAAATTCATTCCCGGTAACGTTCACATCTATGGTCCACTTCTaGTTTCTTGTTAAACTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LFCTETQRGLNSFPVTFTSMVHF*FLVKLD Trigger: ATCCAGTTTAACAAGAAAGCAGAAGTGGACCATAGA...TGTGAACGTTACCGGGAATGAATTTAATCCTCGTTGAGTTTCAGTACAAAAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS GCA 90 bp | CCCGCCCGCCGCTGCGCGATGCCCGTCGGCTCGCCGCCCGCCCGCTaGTATCGCTGCTCCCGCCTCCTCCCGCCATCGTGTTCGACCGCC | + |
|
Preference number: 5 (lower is better) Translates to: PARRCAMPVGSPPAR*YRCSRLLPPSCSTA Trigger: GGCGGTCGAACACGATGGCGGGAGGAGGCGGGAGCAGCGATAGCAGCGGGCGGGCGGCGAGCCGACGGGCATCGCGCAGCGGCGGGCGGG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000116425.3 ENSMUST00000133925.8 |
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| CDS TCA 90 bp | CTCCCCGCCCTCCCCGCCCTCCCGACTGGGCCGTTTCCTTGGCTGTaGCGCCATCGGGTCACGCACAACGCCCGGGCCGGAAGCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LPALPALPTGPFPWL*RHRVTHNARAGSRA Trigger: GGCCCTGCTTCCGGCCCGGGCGTTGTGCGTGACCCGATGGCGTCACAGCCAAGGAAACGGCCCAGTCGGGAGGGCGGGGAGGGCGGGGAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000116425.3 ENSMUST00000133925.8 |
||
| CDS-3UTR CAA 90 bp | TTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCACGGCGATGCTGACATGGCCTaGTGGGAGGAGTTGAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: FWHCPSRGPACCLGCGHGDADMA*WEELRP Trigger: AGGCCTCAACTCCTCCCACAAGGCCATGTCAGCATC...GCCGTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGTGCCAGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
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| CDS-3UTR CAA 90 bp | GCCACAATTCTCATCGCAGTCCCGCTTCTGAAAGAGGCGTCACAGCACAGGGGCTTGAGCACCCAGCGGTaGACCGCCTCCTCCAGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: ATILIAVPLLKEASQHRGLSTQR*TASSRR Trigger: TCGCCTGGAGGAGGCGGTCAACCGCTGGGTGCTCAA...GCCCCTGTGCTGTGACGCCTCTTTCAGAAGCGGGACTGCGATGAGAATTGTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 |
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| CDS-3UTR CAA 90 bp | TTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCACGGCTTTCCTTCCCCGTATTaGCGCACTCCATCCTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: FWHCPSRGPACCLGCGHGFPSPY*RTPSFT Trigger: GGTGAAGGATGGAGTGCGCAAATACGGGGAAGGAAA...GCCGTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGTGCCAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 |
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| CDS-3UTR CAA 90 bp | TTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCACGGCATGACAGCAGCCTCCTaGACCAGTTTTCTGCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: FWHCPSRGPACCLGCGHGMTAAS*TSFLLD Trigger: ATCCAGCAGAAAACTGGTCAAGGAGGCTGCTGTCAT...GCCGTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGTGCCAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
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| CDS-3UTR CAA 90 bp | ATCTTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCACTTGAGAGCTCTGGGCTaGGATGCTGACATGGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: IFWHCPSRGPACCLGCGHLRALG*DADMAL Trigger: CAAGGCCATGTCAGCATCCAAGCCCAGAGCTCTCAA...GTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGTGCCAGAAGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
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| CDS GCA 90 bp | ATGCGCGACAGACACTGCATAACCCGCAGCAACCGGGACACCGTATaGTCCTTCCCCAAGGGCCTGACAAGCAACGCCTGCATGATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: MRDRHCITRSNRDTV*SFPKGLTSNACMMS Trigger: GGACATCATGCAGGCGTTGCTTGTCAGGCCCTTGGGGAAGGAGCATACGGTGTCCCGGTTGCTGCGGGTTATGCAGTGTCTGTCGCGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000116425.3 ENSMUST00000133925.8 ENSMUST00000142616.8 |
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| CDS CCA 90 bp | TGTCCTCCTCCAACAGCAATCTGCTTATTGTCATGGGACTGTTCCTaGGCTGCCGGTCTGAGCCTCCCTCACCCTCAGCAGGAGCTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: CPPPTAICLLSWDCS*AAGLSLPHPQQELR Trigger: GCGCAGCTCCTGCTGAGGGTGAGGGAGGCTCAGACCGGCAGCCCAGGAACAGTCCCATGACAATAAGCAGATTGCTGTTGGAGGAGGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068421.13 ENSMUST00000116425.3 ENSMUST00000133925.8 |
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| CDS-3UTR CAA 90 bp | AGGGAAACACTAATGATCTTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGTTGCGACTGGGCCGTTTCCTaGGCTGTGACGCCATCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: RETLMIFWHCPSRGPACCDWAVS*AVTPSG Trigger: ACCCGATGGCGTCACAGCCAAGGAAACGGCCCAGTC...GCAACAGGCAGGCCCACGGCTGGGACAGTGCCAGAAGATCATTAGTGTTTCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 |
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| CDS-3UTR CAA 90 bp | TTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCACGGCACAGCAATCTGCTTATaGTCATGGGACTGTTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FWHCPSRGPACCLGCGHGTAICL*SWDCSW Trigger: CCAGGAACAGTCCCATGACAATAAGCAGATTGCTGT...GCCGTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGTGCCAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
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| CDS-3UTR CAA 90 bp | GCATTCATCAATGTGGGGGCTGAGGCAGGCAGGTCCAGGGTGGTCGCAAGTAGCGATGCTGACATGGCCTaGTGGGAGGAGTTGAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: AFINVGAEAGRSRVVASSDADMA*WEELRP Trigger: AGGCCTCAACTCCTCCCACAAGGCCATGTCAGCATC...GCTACTTGCGACCACCCTGGACCTGCCTGCCTCAGCCCCCACATTGATGAATGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
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| CDS GCA 90 bp | CTGGGCTGGGCTCAGTACTCTGGCTGTCCTCCTCCAACAGCAATCTaGTTATTGTCATGGGACTGTTCCTGGGCTGCCGGTCTGAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LGWAQYSGCPPPTAI*LLSWDCSWAAGLSL Trigger: GAGGCTCAGACCGGCAGCCCAGGAACAGTCCCATGACAATAAGCAGATTGCTGTTGGAGGAGGACAGCCAGAGTACTGAGCCCAGCCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068421.13 ENSMUST00000116425.3 ENSMUST00000133925.8 |
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| CDS-3UTR CAA 90 bp | CGTCACAGCACAGGGGCTACTGTTGAGAACCGTGTTCTTGTGAGTCCTGTGGCTGACTGGGCCGTTTCCTaGGCTGTGACGCCATCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: RHSTGATVENRVLVSPVADWAVS*AVTPSG Trigger: ACCCGATGGCGTCACAGCCAAGGAAACGGCCCAGTC...AGCCACAGGACTCACAAGAACACGGTTCTCAACAGTAGCCCCTGTGCTGTGACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR CAA 90 bp | ATCTTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCACCTTTCTGGTCCAGTTTaGCAAAAGCGGCCTCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: IFWHCPSRGPACCLGCGHLSGPV*QKRPLS Trigger: ACTCAGAGGCCGCTTTTGCAAAACTGGACCAGAAAG...GTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGTGCCAGAAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 |
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| CDS-3UTR CAA 90 bp | TTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCACGGCCTGTTCCACTTGTCTTaGGATGCTTTGGGATTCACT | + |
|
Preference number: 5 (lower is better) Translates to: FWHCPSRGPACCLGCGHGLFHLS*DALGFT Trigger: AGTGAATCCCAAAGCATCCAAAGACAAGTGGAACAG...GCCGTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGTGCCAGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068388.15 |
||
| CDS GCA 90 bp | TCCTCCAACAGCAATCTGCTTATTGTCATGGGACTGTTCCTGGGCTaGCGGTCTGAGCCTCCCTCACCCTCAGCAGGAGCTGCGCTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSNSNLLIVMGLFLG*RSEPPSPSAGAALS Trigger: TGAAAGCGCAGCTCCTGCTGAGGGTGAGGGAGGCTCAGACCGGCAGCCCAGGAACAGTCCCATGACAATAAGCAGATTGCTGTTGGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068421.13 ENSMUST00000116425.3 ENSMUST00000133925.8 |
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| CDS CCA 90 bp | CAGTACTCTGGCTGTCCTCCTCCAACAGCAATCTGCTTATTGTCATaGGACTGTTCCTGGGCTGCCGGTCTGAGCCTCCCTCACCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: QYSGCPPPTAICLLS*DCSWAAGLSLPHPQ Trigger: CTGAGGGTGAGGGAGGCTCAGACCGGCAGCCCAGGAACAGTCCCATGACAATAAGCAGATTGCTGTTGGAGGAGGACAGCCAGAGTACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068421.13 ENSMUST00000116425.3 ENSMUST00000133925.8 |
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| CDS CCA 90 bp | CACTTGTCTTTGGATGCTTTGGGCTTCTTCTCCCCCGGGTGGGGTTaGTTGAGAGCTCTGGGCTTGGATGCTGACATGGCCTTGTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: HLSLDALGFFSPGWG*LRALGLDADMALWE Trigger: CTCCCACAAGGCCATGTCAGCATCCAAGCCCAGAGCTCTCAACCAACCCCACCCGGGGGAGAAGAAGCCCAAAGCATCCAAAGACAAGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR CAA 90 bp | TTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCACGGCTCCACTTCTGCTTTCTaGTTAAACTGGATGACCTGT | + |
|
Preference number: 5 (lower is better) Translates to: FWHCPSRGPACCLGCGHGSTSAF*LNWMTC Trigger: ACAGGTCATCCAGTTTAACAAGAAAGCAGAAGTGGA...GCCGTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGTGCCAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS TCA 90 bp | CAGCAATCTGCTTATTGTCATGGGACTGTTCCTGGGCTGCCGGTCTaGGCCTCCCTCACCCTCAGCAGGAGCTGCGCTTTCATGTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: QQSAYCHGTVPGLPV*ASLTLSRSCAFMFI Trigger: GATGAACATGAAAGCGCAGCTCCTGCTGAGGGTGAGGGAGGCTCAGACCGGCAGCCCAGGAACAGTCCCATGACAATAAGCAGATTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068421.13 ENSMUST00000116425.3 ENSMUST00000133925.8 |
||
| CDS CCA 90 bp | CTGTTCCACTTGTCTTTGGATGCTTTGGGCTTCTTCTCCCCCGGGTaGGGTTGGTTGAGAGCTCTGGGCTTGGATGCTGACATGGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LFHLSLDALGFFSPG*GWLRALGLDADMAL Trigger: CAAGGCCATGTCAGCATCCAAGCCCAGAGCTCTCAACCAACCCCACCCGGGGGAGAAGAAGCCCAAAGCATCCAAAGACAAGTGGAACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS CCA 90 bp | CAAAGAAGGTCTTCATACTTGGGCTTCTTCTCCCCCGGGTGGGGTTaGTTGAGAGCTCTGGGCTTGGATGCTGACATGGCCTTGTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QRRSSYLGFFSPGWG*LRALGLDADMALWE Trigger: CTCCCACAAGGCCATGTCAGCATCCAAGCCCAGAGCTCTCAACCAACCCCACCCGGGGGAGAAGAAGCCCAAGTATGAAGACCTTCTTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| CDS-3UTR CAA 90 bp | GCATTCATCAATGTGGGGGCTGAGGCAGGCAGGTCCAGGGTGGTCGCAAGTAGCTCTTTCCTGGGTCTCTaGTGTTTGTGGGCTGGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: AFINVGAEAGRSRVVASSSFLGL*CLWAGD Trigger: ATCACCAGCCCACAAACACAAGAGACCCAGGAAAGA...GCTACTTGCGACCACCCTGGACCTGCCTGCCTCAGCCCCCACATTGATGAATGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS CCA 90 bp | AGTCCTGATCCCGATGGTGGCTGGAGGGTTCTGAGGCTGTCTGCTTaGAGGCTCTCTAAGTGGTTTTTCCACTGGCTCTGGGTGCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SPDPDGGWRVLRLSA*RLSKWFFHWLWVLF Trigger: GAAAAGCACCCAGAGCCAGTGGAAAAACCACTTAGAGAGCCTCCAAGCAGACAGCCTCAGAACCCTCCAGCCACCATCGGGATCAGGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000116425.3 |
||
| CDS CCA 90 bp | CTCCTACAAAGAAGGTCTTCATACTTGGGCTTCTTCTCCCCCGGGTaGGGTTGGTTGAGAGCTCTGGGCTTGGATGCTGACATGGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLQRRSSYLGFFSPG*GWLRALGLDADMAL Trigger: CAAGGCCATGTCAGCATCCAAGCCCAGAGCTCTCAACCAACCCCACCCGGGGGAGAAGAAGCCCAAGTATGAAGACCTTCTTTGTAGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| CDS-3UTR CAA 90 bp | ATCTTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCACCTTCCCTCATTGTACTaGAAGCAGCTGATTCAGATT | + |
|
Preference number: 5 (lower is better) Translates to: IFWHCPSRGPACCLGCGHLPSLY*KQLIQI Trigger: AATCTGAATCAGCTGCTTCAAGTACAATGAGGGAAG...GTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGTGCCAGAAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR CAA 90 bp | ATCTTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGTTGCCTCGGCTGTGGTCACGCTTTTCTTCCCTCATaGTACTTGAAGCAGCTGATT | + |
|
Preference number: 5 (lower is better) Translates to: IFWHCPSRGPACCLGCGHAFLPS*YLKQLI Trigger: AATCAGCTGCTTCAAGTACAATGAGGGAAGAAAAGC...GTGACCACAGCCGAGGCAACAGGCAGGCCCACGGCTGGGACAGTGCCAGAAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR CAA 90 bp | GCCACAATTCTCATCGCAGTCCCGCTTCTGAAAGAGGCGTCACAGCACAGGGGCCTTTCTGGTCCAGTTTaGCAAAAGCGGCCTCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: ATILIAVPLLKEASQHRGLSGPV*QKRPLS Trigger: ACTCAGAGGCCGCTTTTGCAAAACTGGACCAGAAAG...GCCCCTGTGCTGTGACGCCTCTTTCAGAAGCGGGACTGCGATGAGAATTGTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR CAA 90 bp | AATGGCCTTGGGAGATCAGTGTGGCAAAGGCCTTACGGCAGGGACAGCTATACAGATGCTGACATGGCCTaGTGGGAGGAGTTGAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: NGLGRSVWQRPYGRDSYTDADMA*WEELRP Trigger: AGGCCTCAACTCCTCCCACAAGGCCATGTCAGCATC...TGTATAGCTGTCCCTGCCGTAAGGCCTTTGCCACACTGATCTCCCAAGGCCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| CDS-3UTR CAA 90 bp | CGTCACAGCACAGGGGCTACTGTTGAGAACCGTGTTCTTGTGAGTCCTGTGGCTTTGAGAGCTCTGGGCTaGGATGCTGACATGGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RHSTGATVENRVLVSPVALRALG*DADMAL Trigger: CAAGGCCATGTCAGCATCCAAGCCCAGAGCTCTCAA...AGCCACAGGACTCACAAGAACACGGTTCTCAACAGTAGCCCCTGTGCTGTGACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGGGACAGCTATACAAGGGTTCATGGGGAAGGGGGAGTTTCAGGAGAGGAAAGAAGGTCTTCATACTaGGGCTTCTTCTCCCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: GRDSYTRVHGEGGVSGEERRSSY*GFFSPG Trigger: CCCGGGGGAGAAGAAGCCCAAGTATGAAGACCTTCT...TTCCTCTCCTGAAACTCCCCCTTCCCCATGAACCCTTGTATAGCTGTCCCTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| CDS-3UTR CAA 90 bp | ACAGGGGCTACTGTTGAGAACCGTGTTCTTGTGAGTCCTGTGGCTACGAAACCCTTGTCTTTGGATGCTTaGGGCTTCTTCTCCCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: TGATVENRVLVSPVATKPLSLDA*GFFSPG Trigger: CCCGGGGGAGAAGAAGCCCAAAGCATCCAAAGACAA...GGGTTTCGTAGCCACAGGACTCACAAGAACACGGTTCTCAACAGTAGCCCCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS CCA 90 bp | GGTGGCTGGAGGGTTCTGAGGCTGTCTGCTTGGAGGCTCTCTAAGTaGTTTTTCCACTGGCTCTGGGTGCTTTTCTTCCCTCATTGTACT | + |
|
Preference number: 5 (lower is better) Translates to: GGWRVLRLSAWRLSK*FFHWLWVLFFPHCT Trigger: AGTACAATGAGGGAAGAAAAGCACCCAGAGCCAGTGGAAAAACCACTTAGAGAGCCTCCAAGCAGACAGCCTCAGAACCCTCCAGCCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000116425.3 |
||
| CDS-3UTR CAA 90 bp | AAGAGTACACCCAATGCAAGGAAGCCATGTTATCACATGCCAAGGCCTTTCACAGACTGGGCCGTTTCCTaGGCTGTGACGCCATCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: KSTPNARKPCYHMPRPFTDWAVS*AVTPSG Trigger: ACCCGATGGCGTCACAGCCAAGGAAACGGCCCAGTC...TGTGAAAGGCCTTGGCATGTGATAACATGGCTTCCTTGCATTGGGTGTACTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| CDS-3UTR CAA 90 bp | GCCACAATTCTCATCGCAGTCCCGCTTCTGAAAGAGGCGTCACAGCACAGGGGCATCATCTCCAGCACATaGATAGCTGATTCCAAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: ATILIAVPLLKEASQHRGIISST*IADSKG Trigger: ACCCTTGGAATCAGCTATCAATGTGCTGGAGATGAT...GCCCCTGTGCTGTGACGCCTCTTTCAGAAGCGGGACTGCGATGAGAATTGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
||
| CDS-3UTR CAA 90 bp | CACAATTCTCATCGCAGTCCCGCTTCTGAAAGAGGCGTCACAGCACAGGGGCTATCTTTCCTGGGTCTCTaGTGTTTGTGGGCTGGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: HNSHRSPASERGVTAQGLSFLGL*CLWAGD Trigger: ATCACCAGCCCACAAACACAAGAGACCCAGGAAAGA...TAGCCCCTGTGCTGTGACGCCTCTTTCAGAAGCGGGACTGCGATGAGAATTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR CAA 90 bp | GATGGTGGCTGGAGGGTTCTGAGGCTGTCTTGGAGGCTCTCTAAGTGGTTTTTCATGACAGCAGCCTCCTaGACCAGTTTTCTGCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: DGGWRVLRLSWRLSKWFFMTAAS*TSFLLD Trigger: ATCCAGCAGAAAACTGGTCAAGGAGGCTGCTGTCAT...GAAAAACCACTTAGAGAGCCTCCAAGACAGCCTCAGAACCCTCCAGCCACCATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142616.8 |
||
| CDS-3UTR CAA 90 bp | CTGTCACATTGTCACTCCCTGCTCCAGTCTCATCCTAGCAGTCTGAGCAAGCCTCTTTCTGGTCCAGTTTaGCAAAAGCGGCCTCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LSHCHSLLQSHPSSLSKPLSGPV*QKRPLS Trigger: ACTCAGAGGCCGCTTTTGCAAAACTGGACCAGAAAG...AGGCTTGCTCAGACTGCTAGGATGAGACTGGAGCAGGGAGTGACAATGTGACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| CDS-3UTR CAA 90 bp | CGGCTGTGGTCACGGCTAGTCCTGGCTTTGCTTTTTAGCTCCATGATCTCCAGCCTGTTCCACTTGTCTTaGGATGCTTTGGGCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RLWSRLVLALLFSSMISSLFHLS*DALGFF Trigger: GAAGAAGCCCAAAGCATCCAAAGACAAGTGGAACAG...GCTGGAGATCATGGAGCTAAAAAGCAAAGCCAGGACTAGCCGTGACCACAGCCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS GCA 90 bp | AAGGAACAGTCTAAATTTTCTCCTTCTTCAATGCGCGACAGACACTaGATAACCCGCAGCAACCGGGACACCGTATGCTCCTTCCCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: KEQSKFSPSSMRDRH*ITRSNRDTVCSFPK Trigger: CTTGGGGAAGGAGCATACGGTGTCCCGGTTGCTGCGGGTTATGCAGTGTCTGTCGCGCATTGAAGAAGGAGAAAATTTAGACTGTTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000116425.3 ENSMUST00000133925.8 ENSMUST00000142616.8 |
||
| CDS-3UTR CAA 90 bp | GGACTGAGAGGAGGTGCACAGCGGGAGAAACAAACAGTATGTTCTGAGAGCACAATGACAGCAGCCTCCTaGACCAGTTTTCTGCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: GLRGGAQREKQTVCSESTMTAAS*TSFLLD Trigger: ATCCAGCAGAAAACTGGTCAAGGAGGCTGCTGTCAT...TGTGCTCTCAGAACATACTGTTTGTTTCTCCCGCTGTGCACCTCCTCTCAGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| CDS-3UTR CAA 90 bp | ACAGCTATACAAGGGTTCATGGGGAAGGGGGAGTTTCAGGAGAGGAACTGTATATTGAGAGCTCTGGGCTaGGATGCTGACATGGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TAIQGFMGKGEFQERNCILRALG*DADMAL Trigger: CAAGGCCATGTCAGCATCCAAGCCCAGAGCTCTCAA...TATACAGTTCCTCTCCTGAAACTCCCCCTTCCCCATGAACCCTTGTATAGCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| CDS CCA 90 bp | GGAGCTGCGCTTTCATGTTCATCTTTCCTGGGTCTCTTGTGTTTGTaGGCTGGTGATGATGGGGATGCCAGATTAGCAAGTACCAGATCT | + |
|
Preference number: 5 (lower is better) Translates to: GAALSCSSFLGLLCL*AGDDGDARLASTRS Trigger: AGATCTGGTACTTGCTAATCTGGCATCCCCATCATCACCAGCCCACAAACACAAGAGACCCAGGAAAGATGAACATGAAAGCGCAGCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068421.13 ENSMUST00000116425.3 ENSMUST00000133925.8 |
||
| CDS-3UTR CAA 90 bp | ACAGAGCTCTTTTGTACTGAAACTCAACGAGGATTAAATTCATTCCCGGTAACGGACTGGGCCGTTTCCTaGGCTGTGACGCCATCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: TELFCTETQRGLNSFPVTDWAVS*AVTPSG Trigger: ACCCGATGGCGTCACAGCCAAGGAAACGGCCCAGTC...CGTTACCGGGAATGAATTTAATCCTCGTTGAGTTTCAGTACAAAAGAGCTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR CAA 90 bp | GATGCCACAATTCTCATCGCAGTCCCGCTTCTGAAAGAGGCGTCACAGCACAGGGCTTTTCTTCCCTCATaGTACTTGAAGCAGCTGATT | + |
|
Preference number: 5 (lower is better) Translates to: DATILIAVPLLKEASQHRAFLPS*YLKQLI Trigger: AATCAGCTGCTTCAAGTACAATGAGGGAAGAAAAGC...CCTGTGCTGTGACGCCTCTTTCAGAAGCGGGACTGCGATGAGAATTGTGGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR CAA 90 bp | ATACAAGGGTTCATGGGGAAGGGGGAGTTTCAGGAGAGGAACTGTATAGGTGGCACAGCAATCTGCTTATaGTCATGGGACTGTTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: IQGFMGKGEFQERNCIGGTAICL*SWDCSW Trigger: CCAGGAACAGTCCCATGACAATAAGCAGATTGCTGT...GCCACCTATACAGTTCCTCTCCTGAAACTCCCCCTTCCCCATGAACCCTTGTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| CDS-3UTR CAA 90 bp | CTAAAGGGAAACACTAATGATCTTCTGGCACTGTCCCAGCCGTGGGCCTGCCTGTCCACTTCTGCTTTCTaGTTAAACTGGATGACCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LKGNTNDLLALSQPWACLSTSAF*LNWMTC Trigger: ACAGGTCATCCAGTTTAACAAGAAAGCAGAAGTGGA...CAGGCAGGCCCACGGCTGGGACAGTGCCAGAAGATCATTAGTGTTTCCCTTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS CCA 90 bp | CAGGCATCTTCATACATGAACATACACGTCCCAGCCAGATCTTTCTaGTCCAGTTTTGCAAAAGCGGCCTCTGAGTCTTGTGCAGTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: QASSYMNIHVPARSF*SSFAKAASESCAVD Trigger: GTCTACTGCACAAGACTCAGAGGCCGCTTTTGCAAAACTGGACCAGAAAGATCTGGCTGGGACGTGTATGTTCATGTATGAAGATGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068388.15 |
||
| CDS-3UTR CAA 90 bp | GGGGCTACTGTTGAGAACCGTGTTCTTGTGAGTCCTGTGGCTACGAAACCCTTTATCATCTCCAGCACATaGATAGCTGATTCCAAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: GATVENRVLVSPVATKPFIISST*IADSKG Trigger: ACCCTTGGAATCAGCTATCAATGTGCTGGAGATGAT...AAAGGGTTTCGTAGCCACAGGACTCACAAGAACACGGTTCTCAACAGTAGCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
||
| CDS-3UTR CAA 90 bp | AATGGCCTTGGGAGATCAGTGTGGCAAAGGCCTTACGGCAGGGACAGCTATACACTTCCCTCATTGTACTaGAAGCAGCTGATTCAGATT | + |
|
Preference number: 5 (lower is better) Translates to: NGLGRSVWQRPYGRDSYTLPSLY*KQLIQI Trigger: AATCTGAATCAGCTGCTTCAAGTACAATGAGGGAAG...TGTATAGCTGTCCCTGCCGTAAGGCCTTTGCCACACTGATCTCCCAAGGCCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| CDS-3UTR CAA 90 bp | AGGGAAGGGGCGGCTAAGCTTATCTACAATCACCATTTAACCAAACACCACTTGTTTCCTTCCCCGTATTaGCGCACTCCATCCTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: REGAAKLIYNHHLTKHHLFPSPY*RTPSFT Trigger: GGTGAAGGATGGAGTGCGCAAATACGGGGAAGGAAA...CAAGTGGTGTTTGGTTAAATGGTGATTGTAGATAAGCTTAGCCGCCCCTTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR CAA 90 bp | AGGGAAGGGGCGGCTAAGCTTATCTACAATCACCATTTAACCAAACACCACTTGATGACAGCAGCCTCCTaGACCAGTTTTCTGCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: REGAAKLIYNHHLTKHHLMTAAS*TSFLLD Trigger: ATCCAGCAGAAAACTGGTCAAGGAGGCTGCTGTCAT...CAAGTGGTGTTTGGTTAAATGGTGATTGTAGATAAGCTTAGCCGCCCCTTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
||
| CDS-3UTR CAA 90 bp | TTTTTGCTAAAAAGACAGTCTGTAAGGGTGTCTGAGAGACAGCAAGCACAACACTTGTCTTTGGATGCTTaGGGCTTCTTCTCCCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: FLLKRQSVRVSERQQAQHLSLDA*GFFSPG Trigger: CCCGGGGGAGAAGAAGCCCAAAGCATCCAAAGACAA...GTGTTGTGCTTGCTGTCTCTCAGACACCCTTACAGACTGTCTTTTTAGCAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS GCA 90 bp | TGTCTGCTTGGAGGCTCTCTAAGTGGTTTTTCCACTGGCTCTGGGTaGTTTTCTTCCCTCATTGTACTTGAAGCAGCTGATTCAGATTTC | + |
|
Preference number: 5 (lower is better) Translates to: CLLGGSLSGFSTGSG*FSSLIVLEAADSDF Trigger: GAAATCTGAATCAGCTGCTTCAAGTACAATGAGGGAAGAAAAGCACCCAGAGCCAGTGGAAAAACCACTTAGAGAGCCTCCAAGCAGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000116425.3 |
||
| CDS-3UTR CAA 90 bp | ACATCAGGTGAGCTAGTAACTTTTCTGTGCCTTCCTCATCTATACGATAGGGCTTCTTTCCTGGGTCTCTaGTGTTTGTGGGCTGGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: TSGELVTFLCLPHLYDRASFLGL*CLWAGD Trigger: ATCACCAGCCCACAAACACAAGAGACCCAGGAAAGA...AGCCCTATCGTATAGATGAGGAAGGCACAGAAAAGTTACTAGCTCACCTGATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| CDS-3UTR CAA 90 bp | TTTTTGCTAAAAAGACAGTCTGTAAGGGTGTCTGAGAGACAGCAAGCACAACACTTTCCTTCCCCGTATTaGCGCACTCCATCCTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: FLLKRQSVRVSERQQAQHFPSPY*RTPSFT Trigger: GGTGAAGGATGGAGTGCGCAAATACGGGGAAGGAAA...GTGTTGTGCTTGCTGTCTCTCAGACACCCTTACAGACTGTCTTTTTAGCAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS TCA 90 bp | CACAATGTTCAAACTCGCTGTCAGTTTTCCAGGCATCTTCATACATaGACATACACGTCCCAGCCAGATCTTTCTGGTCCAGTTTTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: HNVQTRCQFSRHLHT*TYTSQPDLSGPVLQ Trigger: TTGCAAAACTGGACCAGAAAGATCTGGCTGGGACGTGTATGTTCATGTATGAAGATGCCTGGAAAACTGACAGCGAGTTTGAACATTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068388.15 |
||
| CDS-3UTR CAA 90 bp | ACATCAGGTGAGCTAGTAACTTTTCTGTGCCTTCCTCATCTATACGATAGGGCTATCATCTCCAGCACATaGATAGCTGATTCCAAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: TSGELVTFLCLPHLYDRAIISST*IADSKG Trigger: ACCCTTGGAATCAGCTATCAATGTGCTGGAGATGAT...AGCCCTATCGTATAGATGAGGAAGGCACAGAAAAGTTACTAGCTCACCTGATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| CDS GCA 90 bp | TTCCTTTTCTTCAAGCCCGTTAGGGCTGTTCCACTTGTCTTTGGATaGTTTGGGATTCACTACACAATGTTCAAACTCGCTGTCAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: FLFFKPVRAVPLVFG*FGIHYTMFKLAVSF Trigger: AAAACTGACAGCGAGTTTGAACATTGTGTAGTGAATCCCAAAGCATCCAAAGACAAGTGGAACAGCCCTAACGGGCTTGAAGAAAAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068388.15 |
||
| CDS-3UTR CAA 90 bp | ACATCAGGTGAGCTAGTAACTTTTCTGTGCCTTCCTCATCTATACGATAGGGCTGCTTTTCTTCCCTCATaGTACTTGAAGCAGCTGATT | + |
|
Preference number: 5 (lower is better) Translates to: TSGELVTFLCLPHLYDRAAFLPS*YLKQLI Trigger: AATCAGCTGCTTCAAGTACAATGAGGGAAGAAAAGC...AGCCCTATCGTATAGATGAGGAAGGCACAGAAAAGTTACTAGCTCACCTGATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
||
| CDS-3UTR CAA 90 bp | ACAGAGCTCTTTTGTACTGAAACTCAACGAGGATTAAATTCATTCCCGGTAACGCTGTTCCACTTGTCTTaGGATGCTTTGGGCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TELFCTETQRGLNSFPVTLFHLS*DALGFF Trigger: GAAGAAGCCCAAAGCATCCAAAGACAAGTGGAACAG...CGTTACCGGGAATGAATTTAATCCTCGTTGAGTTTCAGTACAAAAGAGCTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR CAA 90 bp | TTTTTGCTAAAAAGACAGTCTGTAAGGGTGTCTGAGAGACAGCAAGCACAACACCTTCCCTCATTGTACTaGAAGCAGCTGATTCAGATT | + |
|
Preference number: 5 (lower is better) Translates to: FLLKRQSVRVSERQQAQHLPSLY*KQLIQI Trigger: AATCTGAATCAGCTGCTTCAAGTACAATGAGGGAAG...GTGTTGTGCTTGCTGTCTCTCAGACACCCTTACAGACTGTCTTTTTAGCAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR CAA 90 bp | CTCTTTTGTACTGAAACTCAACGAGGATTAAATTCATTCCCGGTAACGTTCACAACAGCAATCTGCTTATaGTCATGGGACTGTTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LFCTETQRGLNSFPVTFTTAICL*SWDCSW Trigger: CCAGGAACAGTCCCATGACAATAAGCAGATTGCTGT...TGTGAACGTTACCGGGAATGAATTTAATCCTCGTTGAGTTTCAGTACAAAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR CAA 90 bp | CTCTTTTGTACTGAAACTCAACGAGGATTAAATTCATTCCCGGTAACGTTCACAATCATCTCCAGCACATaGATAGCTGATTCCAAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LFCTETQRGLNSFPVTFTIISST*IADSKG Trigger: ACCCTTGGAATCAGCTATCAATGTGCTGGAGATGAT...TGTGAACGTTACCGGGAATGAATTTAATCCTCGTTGAGTTTCAGTACAAAAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
||
| CDS-3UTR CAA 90 bp | TTTTGTACTGAAACTCAACGAGGATTAAATTCATTCCCGGTAACGTTCACATTTATGACAGCAGCCTCCTaGACCAGTTTTCTGCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: FCTETQRGLNSFPVTFTFMTAAS*TSFLLD Trigger: ATCCAGCAGAAAACTGGTCAAGGAGGCTGCTGTCAT...AAATGTGAACGTTACCGGGAATGAATTTAATCCTCGTTGAGTTTCAGTACAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 ENSMUST00000142616.8 |
||
| CDS-3UTR CAA 90 bp | ACAGAGCTCTTTTGTACTGAAACTCAACGAGGATTAAATTCATTCCCGGTAACGCTTCCCTCATTGTACTaGAAGCAGCTGATTCAGATT | + |
|
Preference number: 5 (lower is better) Translates to: TELFCTETQRGLNSFPVTLPSLY*KQLIQI Trigger: AATCTGAATCAGCTGCTTCAAGTACAATGAGGGAAG...CGTTACCGGGAATGAATTTAATCCTCGTTGAGTTTCAGTACAAAAGAGCTCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR CAA 90 bp | TTTTGTACTGAAACTCAACGAGGATTAAATTCATTCCCGGTAACGTTCACATTTCTTTCTGGTCCAGTTTaGCAAAAGCGGCCTCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: FCTETQRGLNSFPVTFTFLSGPV*QKRPLS Trigger: ACTCAGAGGCCGCTTTTGCAAAACTGGACCAGAAAG...AAATGTGAACGTTACCGGGAATGAATTTAATCCTCGTTGAGTTTCAGTACAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 |
||
| CDS-3UTR CAA 90 bp | CTCTTTTGTACTGAAACTCAACGAGGATTAAATTCATTCCCGGTAACGTTCACAGCTTTTCTTCCCTCATaGTACTTGAAGCAGCTGATT | + |
|
Preference number: 5 (lower is better) Translates to: LFCTETQRGLNSFPVTFTAFLPS*YLKQLI Trigger: AATCAGCTGCTTCAAGTACAATGAGGGAAGAAAAGC...TGTGAACGTTACCGGGAATGAATTTAATCCTCGTTGAGTTTCAGTACAAAAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 |
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| CDS-3UTR CAA 90 bp | CTCTTTTGTACTGAAACTCAACGAGGATTAAATTCATTCCCGGTAACGTTCACATCCACTTCTGCTTTCTaGTTAAACTGGATGACCTGT | + |
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Preference number: 5 (lower is better) Translates to: LFCTETQRGLNSFPVTFTSTSAF*LNWMTC Trigger: ACAGGTCATCCAGTTTAACAAGAAAGCAGAAGTGGA...TGTGAACGTTACCGGGAATGAATTTAATCCTCGTTGAGTTTCAGTACAAAAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000133925.8 |
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| CDS GCA 72 bp | CGCTGCGCGATGCCCGTCGGCTCGCCGCCCGCCCGCTaGTATCGCTGCTCCCGCCTCCTCCCGCCATCGTGT | + |
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Preference number: 6 (lower is better) Translates to: RCAMPVGSPPAR*YRCSRLLPPSC Trigger: ACACGATGGCGGGAGGAGGCGGGAGCAGCGATAGCAGCGGGCGGGCGGCGAGCCGACGGGCATCGCGCAGCG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000116425.3 ENSMUST00000133925.8 |
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| CDS CAA 72 bp | CCCCGCCCTCCCCGCCCTCCCGACTGGGCCGTTTCCTaGGCTGTGACGCCATCGGGTCACGCACAACGCCCG | + |
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Preference number: 6 (lower is better) Translates to: PRPPRPPDWAVS*AVTPSGHAQRP Trigger: CGGGCGTTGTGCGTGACCCGATGGCGTCACAGCCAAGGAAACGGCCCAGTCGGGAGGGCGGGGAGGGCGGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000116425.3 ENSMUST00000133925.8 |
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| CDS TCA 72 bp | CTCCCCGCCCTCCCGACTGGGCCGTTTCCTTGGCTGTaGCGCCATCGGGTCACGCACAACGCCCGGGCCGGA | + |
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Preference number: 6 (lower is better) Translates to: LPALPTGPFPWL*RHRVTHNARAG Trigger: TCCGGCCCGGGCGTTGTGCGTGACCCGATGGCGTCACAGCCAAGGAAACGGCCCAGTCGGGAGGGCGGGGAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000116425.3 ENSMUST00000133925.8 |
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| CDS GCA 72 bp | GGCCTGACAAGCAACGCCTGCATGATGTCCCGGATCTaGCTGAAGTCCCGGTACCGGCTACTCCGAAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: GLTSNACMMSRI*LKSRYRLLRKA Trigger: GGCCTTTCGGAGTAGCCGGTACCGGGACTTCAGGCAGATCCGGGACATCATGCAGGCGTTGCTTGTCAGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000116425.3 ENSMUST00000133925.8 ENSMUST00000142616.8 |
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| CDS TCA 72 bp | GCTTATTGTCATGGGACTGTTCCTGGGCTGCCGGTCTaGGCCTCCCTCACCCTCAGCAGGAGCTGCGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: AYCHGTVPGLPV*ASLTLSRSCAF Trigger: GAAAGCGCAGCTCCTGCTGAGGGTGAGGGAGGCTCAGACCGGCAGCCCAGGAACAGTCCCATGACAATAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068421.13 ENSMUST00000116425.3 ENSMUST00000133925.8 |
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| CDS CCA 72 bp | TTGGATGCTTTGGGCTTCTTCTCCCCCGGGTGGGGTTaGTTGAGAGCTCTGGGCTTGGATGCTGACATGGCC | + |
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Preference number: 6 (lower is better) Translates to: LDALGFFSPGWG*LRALGLDADMA Trigger: GGCCATGTCAGCATCCAAGCCCAGAGCTCTCAACCAACCCCACCCGGGGGAGAAGAAGCCCAAAGCATCCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
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| CDS CAA 90 bp | TGGGCTCAGTACTCTGGCTGTCCTCCTCCAACAGCAATCTGCTTATaGTCATGGGACTGTTCCTGGGCTGCCGGTCTGAGCCTCCCTCAC | + |
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Preference number: 6 (lower is better) Translates to: WAQYSGCPPPTAICL*SWDCSWAAGLSLPH Trigger: GTGAGGGAGGCTCAGACCGGCAGCCCAGGAACAGTCCCATGACAATAAGCAGATTGCTGTTGGAGGAGGACAGCCAGAGTACTGAGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068421.13 ENSMUST00000116425.3 ENSMUST00000133925.8 |
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| CDS TCA 72 bp | ATGCTTTGGGCTTCTTCTCCCCCGGGTGGGGTTGGTTaGGAGCTCTGGGCTTGGATGCTGACATGGCCTTGT | + |
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Preference number: 6 (lower is better) Translates to: MLWASSPPGGVG*ELWAWMLTWPC Trigger: ACAAGGCCATGTCAGCATCCAAGCCCAGAGCTCTCAACCAACCCCACCCGGGGGAGAAGAAGCCCAAAGCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
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| CDS TCA 72 bp | CATACTTGGGCTTCTTCTCCCCCGGGTGGGGTTGGTTaGGAGCTCTGGGCTTGGATGCTGACATGGCCTTGT | + |
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Preference number: 6 (lower is better) Translates to: HTWASSPPGGVG*ELWAWMLTWPC Trigger: ACAAGGCCATGTCAGCATCCAAGCCCAGAGCTCTCAACCAACCCCACCCGGGGGAGAAGAAGCCCAAGTATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
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| CDS GCA 72 bp | AGCAATCTGCTTATTGTCATGGGACTGTTCCTGGGCTaGCGGTCTGAGCCTCCCTCACCCTCAGCAGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: SNLLIVMGLFLG*RSEPPSPSAGA Trigger: AGCTCCTGCTGAGGGTGAGGGAGGCTCAGACCGGCAGCCCAGGAACAGTCCCATGACAATAAGCAGATTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068421.13 ENSMUST00000116425.3 ENSMUST00000133925.8 |
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| CDS CCA 72 bp | CCCGATGGTGGCTGGAGGGTTCTGAGGCTGTCTGCTTaGAGGCTCTCTAAGTGGTTTTTCCACTGGCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: PDGGWRVLRLSA*RLSKWFFHWLW Trigger: CCAGAGCCAGTGGAAAAACCACTTAGAGAGCCTCCAAGCAGACAGCCTCAGAACCCTCCAGCCACCATCGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000116425.3 |
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| CDS CCA 72 bp | CCAACAGCAATCTGCTTATTGTCATGGGACTGTTCCTaGGCTGCCGGTCTGAGCCTCCCTCACCCTCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: PTAICLLSWDCS*AAGLSLPHPQQ Trigger: CTGCTGAGGGTGAGGGAGGCTCAGACCGGCAGCCCAGGAACAGTCCCATGACAATAAGCAGATTGCTGTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068421.13 ENSMUST00000116425.3 ENSMUST00000133925.8 |
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| CDS CCA 72 bp | GGCTGTCCTCCTCCAACAGCAATCTGCTTATTGTCATaGGACTGTTCCTGGGCTGCCGGTCTGAGCCTCCCT | + |
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Preference number: 6 (lower is better) Translates to: GCPPPTAICLLS*DCSWAAGLSLP Trigger: AGGGAGGCTCAGACCGGCAGCCCAGGAACAGTCCCATGACAATAAGCAGATTGCTGTTGGAGGAGGACAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068421.13 ENSMUST00000116425.3 ENSMUST00000133925.8 |
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| CDS CCA 72 bp | TCTTCATACTTGGGCTTCTTCTCCCCCGGGTGGGGTTaGTTGAGAGCTCTGGGCTTGGATGCTGACATGGCC | + |
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Preference number: 6 (lower is better) Translates to: SSYLGFFSPGWG*LRALGLDADMA Trigger: GGCCATGTCAGCATCCAAGCCCAGAGCTCTCAACCAACCCCACCCGGGGGAGAAGAAGCCCAAGTATGAAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
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| CDS CCA 72 bp | TTGTCTTTGGATGCTTTGGGCTTCTTCTCCCCCGGGTaGGGTTGGTTGAGAGCTCTGGGCTTGGATGCTGAC | + |
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Preference number: 6 (lower is better) Translates to: LSLDALGFFSPG*GWLRALGLDAD Trigger: GTCAGCATCCAAGCCCAGAGCTCTCAACCAACCCCACCCGGGGGAGAAGAAGCCCAAAGCATCCAAAGACAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
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| CDS CCA 72 bp | AGAAGGTCTTCATACTTGGGCTTCTTCTCCCCCGGGTaGGGTTGGTTGAGAGCTCTGGGCTTGGATGCTGAC | + |
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Preference number: 6 (lower is better) Translates to: RRSSYLGFFSPG*GWLRALGLDAD Trigger: GTCAGCATCCAAGCCCAGAGCTCTCAACCAACCCCACCCGGGGGAGAAGAAGCCCAAGTATGAAGACCTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116425.3 |
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| CDS GCA 72 bp | TTCAAGCCCGTTAGGGCTGTTCCACTTGTCTTTGGATaGTTTGGGCTTCTTCTCCCCCGGGTGGGGTTGGTT | + |
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Preference number: 6 (lower is better) Translates to: FKPVRAVPLVFG*FGLLLPRVGLV Trigger: AACCAACCCCACCCGGGGGAGAAGAAGCCCAAAGCATCCAAAGACAAGTGGAACAGCCCTAACGGGCTTGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
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| CDS TCA 72 bp | TTCAGAGTCCTGATCCCGATGGTGGCTGGAGGGTTCTaGGGCTGTCTGCTTGGAGGCTCTCTAAGTGGTTTT | + |
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Preference number: 6 (lower is better) Translates to: FRVLIPMVAGGF*GCLLGGSLSGF Trigger: AAAACCACTTAGAGAGCCTCCAAGCAGACAGCCTCAGAACCCTCCAGCCACCATCGGGATCAGGACTCTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000116425.3 |
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| CDS CCA 72 bp | AGGGTTCTGAGGCTGTCTGCTTGGAGGCTCTCTAAGTaGTTTTTCCACTGGCTCTGGGTGCTTTTCTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: RVLRLSAWRLSK*FFHWLWVLFFP Trigger: AGGGAAGAAAAGCACCCAGAGCCAGTGGAAAAACCACTTAGAGAGCCTCCAAGCAGACAGCCTCAGAACCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000116425.3 |
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| CDS CAA 72 bp | ACTTCCTTTTCTTCAAGCCCGTTAGGGCTGTTCCACTaGTCTTTGGATGCTTTGGGCTTCTTCTCCCCCGGG | + |
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Preference number: 6 (lower is better) Translates to: TSFSSSPLGLFH*SLDALGFFSPG Trigger: CCCGGGGGAGAAGAAGCCCAAAGCATCCAAAGACAAGTGGAACAGCCCTAACGGGCTTGAAGAAAAGGAAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068421.13 ENSMUST00000133925.8 |
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| CDS CAA 90 bp | GCAGGAGCTGCGCTTTCATGTTCATCTTTCCTGGGTCTCTTGTGTTaGTGGGCTGGTGATGATGGGGATGCCAGATTAGCAAGTACCAGA | + |
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Preference number: 6 (lower is better) Translates to: AGAALSCSSFLGLLC*WAGDDGDARLASTR Trigger: TCTGGTACTTGCTAATCTGGCATCCCCATCATCACCAGCCCACAAACACAAGAGACCCAGGAAAGATGAACATGAAAGCGCAGCTCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068421.13 ENSMUST00000116425.3 ENSMUST00000133925.8 |
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| CDS CCA 72 bp | TCATACATGAACATACACGTCCCAGCCAGATCTTTCTaGTCCAGTTTTGCAAAAGCGGCCTCTGAGTCTTGT | + |
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Preference number: 6 (lower is better) Translates to: SYMNIHVPARSF*SSFAKAASESC Trigger: ACAAGACTCAGAGGCCGCTTTTGCAAAACTGGACCAGAAAGATCTGGCTGGGACGTGTATGTTCATGTATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068388.15 |
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| CDS CAA 72 bp | GTCAGTGTGAACTCTGTTTTAATCATCTCCAGCACATaGATAGCTGATTCCAAGGGTGTGAGCTCAGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: VSVNSVLIISST*IADSKGVSSAS Trigger: GGAGGCTGAGCTCACACCCTTGGAATCAGCTATCAATGTGCTGGAGATGATTAAAACAGAGTTCACACTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000116425.3 ENSMUST00000133925.8 ENSMUST00000142616.8 |
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| CDS CAA 72 bp | AGCCCGTTAGGGCTGTTCCACTTGTCTTTGGATGCTTaGGGATTCACTACACAATGTTCAAACTCGCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: SPLGLFHLSLDA*GFTTQCSNSLS Trigger: TGACAGCGAGTTTGAACATTGTGTAGTGAATCCCAAAGCATCCAAAGACAAGTGGAACAGCCCTAACGGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068388.15 |
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| CDS GCA 72 bp | TTCAAGCCCGTTAGGGCTGTTCCACTTGTCTTTGGATaGTTTGGGATTCACTACACAATGTTCAAACTCGCT | + |
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Preference number: 6 (lower is better) Translates to: FKPVRAVPLVFG*FGIHYTMFKLA Trigger: AGCGAGTTTGAACATTGTGTAGTGAATCCCAAAGCATCCAAAGACAAGTGGAACAGCCCTAACGGGCTTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068388.15 |
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| CDS CAA 90 bp | TTTTCTTCAAGCCCGTTAGGGCTGTTCCACTTGTCTTTGGATGCTTaGGGATTCACTACACAATGTTCAAACTCGCTGTCAGTTTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: FSSSPLGLFHLSLDA*GFTTQCSNSLSVFQ Trigger: CTGGAAAACTGACAGCGAGTTTGAACATTGTGTAGTGAATCCCAAAGCATCCAAAGACAAGTGGAACAGCCCTAACGGGCTTGAAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068388.15 |
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| CDS CAA 72 bp | ACTTCCTTTTCTTCAAGCCCGTTAGGGCTGTTCCACTaGTCTTTGGATGCTTTGGGATTCACTACACAATGT | + |
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Preference number: 6 (lower is better) Translates to: TSFSSSPLGLFH*SLDALGFTTQC Trigger: ACATTGTGTAGTGAATCCCAAAGCATCCAAAGACAAGTGGAACAGCCCTAACGGGCTTGAAGAAAAGGAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068388.15 |
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| CDS CAA 90 bp | ATAGAGTCTGTCAGTGTGAACTCTGTTTTAATCATCTCCAGCACATaGATAGCTGATTCCAAGGGTGTGAGCTCAGCCTCCATATCAAAG | + |
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Preference number: 6 (lower is better) Translates to: IESVSVNSVLIISST*IADSKGVSSASISK Trigger: CTTTGATATGGAGGCTGAGCTCACACCCTTGGAATCAGCTATCAATGTGCTGGAGATGATTAAAACAGAGTTCACACTGACAGACTCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068388.15 ENSMUST00000068421.13 ENSMUST00000116425.3 ENSMUST00000133925.8 ENSMUST00000142616.8 |
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