Pregenerated sensors for TERB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027229Ensembl transcript IDs: ENSMUST00000028661.6
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGGCAAGACACCTCACAAGGGCTTCATTTCCTCATAAGCCCTGGTaGTGGCCTCAAGCTTCACCACGGGATTGTCAGGCACCTGACTCA | + |
|
Preference number: 1 (lower is better) Translates to: LARHLTRASFPHKPW*WPQASPRDCQAPDS Trigger: TGAGTCAGGTGCCTGACAATCCCGTGGTGAAGCTTGAGGCCAGCACCAGGGCTTATGAGGAAATGAAGCCCTTGTGAGGTGTCTTGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028661.6 |
||
| 3UTR CCA 90 bp | ACTCTGGCAAGACACCTCACAAGGGCTTCATTTCCTCATAAGCCCTaGTGCTGGCCTCAAGCTTCACCACGGGATTGTCAGGCACCTGAC | + |
|
Preference number: 1 (lower is better) Translates to: TLARHLTRASFPHKP*CWPQASPRDCQAPD Trigger: GTCAGGTGCCTGACAATCCCGTGGTGAAGCTTGAGGCCAGCACCAGGGCTTATGAGGAAATGAAGCCCTTGTGAGGTGTCTTGCCAGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028661.6 |
||
| 3UTR CCA 90 bp | GCAAGACACCTCACAAGGGCTTCATTTCCTCATAAGCCCTGGTGCTaGCCTCAAGCTTCACCACGGGATTGTCAGGCACCTGACTCACTA | + |
|
Preference number: 1 (lower is better) Translates to: ARHLTRASFPHKPWC*PQASPRDCQAPDSL Trigger: TAGTGAGTCAGGTGCCTGACAATCCCGTGGTGAAGCTTGAGGCCAGCACCAGGGCTTATGAGGAAATGAAGCCCTTGTGAGGTGTCTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028661.6 |
||
| 3UTR CCA 90 bp | TACAGGAAAACCAGCTTGGAAAATCAGGAAAGTCACATTCCAGATTaGGTTGTGCCTCATTTAGTCACTCTGGCAAGACACCTCACAAGG | + |
|
Preference number: 1 (lower is better) Translates to: YRKTSLENQESHIPD*VVPHLVTLARHLTR Trigger: CCTTGTGAGGTGTCTTGCCAGAGTGACTAAATGAGGCACAACCCAATCTGGAATGTGACTTTCCTGATTTTCCAAGCTGGTTTTCCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028661.6 |
||
| 3UTR GCA 90 bp | ATCCAAGTACCTAAAATTACAGGTCAGTACCAAACCCAGCAAAACTaGCTTCTTGAGATCGCCACATTTCTAGATTTATGTAAGACACAA | + |
|
Preference number: 1 (lower is better) Translates to: IQVPKITGQYQTQQN*LLEIATFLDLCKTQ Trigger: TTGTGTCTTACATAAATCTAGAAATGTGGCGATCTCAAGAAGGCAGTTTTGCTGGGTTTGGTACTGACCTGTAATTTTAGGTACTTGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028661.6 |
||
| 3UTR-3UTR CCA 90 bp | TATGCTCCTGCCTCAGTCATCCAAGTACCTAAAATTACAGGTCAGTACCAAACCCATAAGCCCTGGTGCTaGCCTCAAGCTTCACCACGG | + |
|
Preference number: 2 (lower is better) Translates to: YAPASVIQVPKITGQYQTHKPWC*PQASPR Trigger: CCGTGGTGAAGCTTGAGGCCAGCACCAGGGCTTATG...GGTTTGGTACTGACCTGTAATTTTAGGTACTTGGATGACTGAGGCAGGAGCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028661.6 |
||
| 3UTR CAA 90 bp | GATCCTGATACAGAGGCTCCAGCATGGCCATACAGGAAAACCAGCTaGGAAAATCAGGAAAGTCACATTCCAGATTGGGTTGTGCCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: DPDTEAPAWPYRKTS*ENQESHIPDWVVPH Trigger: ATGAGGCACAACCCAATCTGGAATGTGACTTTCCTGATTTTCCAAGCTGGTTTTCCTGTATGGCCATGCTGGAGCCTCTGTATCAGGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028661.6 |
||
| 3UTR GCA 72 bp | CACCTCACAAGGGCTTCATTTCCTCATAAGCCCTGGTaGTGGCCTCAAGCTTCACCACGGGATTGTCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: HLTRASFPHKPW*WPQASPRDCQA Trigger: TGCCTGACAATCCCGTGGTGAAGCTTGAGGCCAGCACCAGGGCTTATGAGGAAATGAAGCCCTTGTGAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028661.6 |
||
| 3UTR CCA 72 bp | CTCACAAGGGCTTCATTTCCTCATAAGCCCTGGTGCTaGCCTCAAGCTTCACCACGGGATTGTCAGGCACCT | + |
|
Preference number: 3 (lower is better) Translates to: LTRASFPHKPWC*PQASPRDCQAP Trigger: AGGTGCCTGACAATCCCGTGGTGAAGCTTGAGGCCAGCACCAGGGCTTATGAGGAAATGAAGCCCTTGTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028661.6 |
||
| 3UTR CCA 72 bp | AGACACCTCACAAGGGCTTCATTTCCTCATAAGCCCTaGTGCTGGCCTCAAGCTTCACCACGGGATTGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: RHLTRASFPHKP*CWPQASPRDCQ Trigger: CTGACAATCCCGTGGTGAAGCTTGAGGCCAGCACCAGGGCTTATGAGGAAATGAAGCCCTTGTGAGGTGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028661.6 |
||
| 3UTR CCA 72 bp | ATGCGATACACAGATCCTGATACAGAGGCTCCAGCATaGCCATACAGGAAAACCAGCTTGGAAAATCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: MRYTDPDTEAPA*PYRKTSLENQE Trigger: TTCCTGATTTTCCAAGCTGGTTTTCCTGTATGGCCATGCTGGAGCCTCTGTATCAGGATCTGTGTATCGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028661.6 |
||
| 3UTR-3UTR CAA 90 bp | TATGCTCCTGCCTCAGTCATCCAAGTACCTAAAATTACAGGTCAGTACCAAACCTACAGGAAAACCAGCTaGGAAAATCAGGAAAGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: YAPASVIQVPKITGQYQTYRKTS*ENQESH Trigger: GTGACTTTCCTGATTTTCCAAGCTGGTTTTCCTGTA...GGTTTGGTACTGACCTGTAATTTTAGGTACTTGGATGACTGAGGCAGGAGCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028661.6 |
||
| 3UTR TCA 72 bp | CAGCTACAGTTTCAGTTGATTTGGAATGCATTGAGGTaGGAACTTTACTTGGAGCTAGAGGTCAGCTTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: QLQFQLIWNALR*ELYLELEVSLS Trigger: ACTCAAGCTGACCTCTAGCTCCAAGTAAAGTTCTCACCTCAATGCATTCCAAATCAACTGAAACTGTAGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028661.6 |
||
| 3UTR GCA 72 bp | CCTAAAATTACAGGTCAGTACCAAACCCAGCAAAACTaGCTTCTTGAGATCGCCACATTTCTAGATTTATGT | + |
|
Preference number: 3 (lower is better) Translates to: PKITGQYQTQQN*LLEIATFLDLC Trigger: ACATAAATCTAGAAATGTGGCGATCTCAAGAAGGCAGTTTTGCTGGGTTTGGTACTGACCTGTAATTTTAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028661.6 |
||
| CDS-3UTR GCA 90 bp | ACTCTGGCAAGACACCTCACAAGGGCTTCATTTCCTCATAAGCCCTGGTGCTGGCTCAGCGTGTCAGGGTaGGAGGCATCACAGCTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: TLARHLTRASFPHKPWCWLSVSG*EASQLN Trigger: GTTTAGCTGTGATGCCTCGCACCCTGACACGCTGAG...CCAGCACCAGGGCTTATGAGGAAATGAAGCCCTTGTGAGGTGTCTTGCCAGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028661.6 |
||
| CDS-3UTR TCA 90 bp | ACAGAGGCTCCAGCATGGCCATACAGGAAAACCAGCTTGGAAAATCAGGAAAGTGCCTCAGGTCCTGACTaGCACTGCCGCAGAACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: TEAPAWPYRKTSLENQESASGPD*HCRRTN Trigger: GTTGGTTCTGCGGCAGTGTCAGTCAGGACCTGAGGC...ACTTTCCTGATTTTCCAAGCTGGTTTTCCTGTATGGCCATGCTGGAGCCTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028661.6 |
||
| CDS-3UTR CCA 90 bp | ACTCTGGCAAGACACCTCACAAGGGCTTCATTTCCTCATAAGCCCTGGTGCTGGGGAGGAAGAACAAAATaGCCTAAGGCCACTGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: TLARHLTRASFPHKPWCWGGRTK*PKATEF Trigger: AAATTCAGTGGCCTTAGGCCATTTTGTTCTTCCTCC...CCAGCACCAGGGCTTATGAGGAAATGAAGCCCTTGTGAGGTGTCTTGCCAGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028661.6 |
||
| CDS-3UTR CCA 90 bp | ACTCTGGCAAGACACCTCACAAGGGCTTCATTTCCTCATAAGCCCTGGTGCTGGGATGCTCTGCACTTTTaGACAGTTCTTGTTTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TLARHLTRASFPHKPWCWDALHF*TVLVCV Trigger: AACACAAACAAGAACTGTCCAAAAGTGCAGAGCATC...CCAGCACCAGGGCTTATGAGGAAATGAAGCCCTTGTGAGGTGTCTTGCCAGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028661.6 |
||
| CDS-3UTR TCA 90 bp | TCCAGCATGGCCATACAGGAAAACCAGCTTGGAAAATCAGGAAAGTCACATTCCATATGCCAAATATCCTaGGCTACCAGGAGTGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSMAIQENQLGKSGKSHSICQIS*ATRSEV Trigger: GACTTCACTCCTGGTAGCTCAGGATATTTGGCATAT...GGAATGTGACTTTCCTGATTTTCCAAGCTGGTTTTCCTGTATGGCCATGCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028661.6 |
||
| CDS-3UTR GCA 90 bp | ACAGAGGCTCCAGCATGGCCATACAGGAAAACCAGCTTGGAAAATCAGGAAAGTCTTCGTATTTCTTTTTaGAGACATGCAGGAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TEAPAWPYRKTSLENQESLRISF*RHAGGR Trigger: TCTTCCTCCTGCATGTCTGCAAAAAGAAATACGAAG...ACTTTCCTGATTTTCCAAGCTGGTTTTCCTGTATGGCCATGCTGGAGCCTCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028661.6 |
||
| CDS-3UTR GCA 90 bp | TCCAGCATGGCCATACAGGAAAACCAGCTTGGAAAATCAGGAAAGTCACATTCCTTCAGTATTAGCTATTaGAGCAAGATAGTAGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: SSMAIQENQLGKSGKSHSFSISY*SKIVGM Trigger: CATGCCTACTATCTTGCTGCAATAGCTAATACTGAA...GGAATGTGACTTTCCTGATTTTCCAAGCTGGTTTTCCTGTATGGCCATGCTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028661.6 |
||
| CDS-3UTR CCA 90 bp | TATGCTCCTGCCTCAGTCATCCAAGTACCTAAAATTACAGGTCAGTACCAAACCTTCTTGTTTGTGTTCTaGTGTTGGTCTAATGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: YAPASVIQVPKITGQYQTFLFVF*CWSNVL Trigger: GAGAACATTAGACCAACACCAGAACACAAACAAGAA...GGTTTGGTACTGACCTGTAATTTTAGGTACTTGGATGACTGAGGCAGGAGCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028661.6 |
||
| CDS-3UTR CAA 90 bp | TATGCTCCTGCCTCAGTCATCCAAGTACCTAAAATTACAGGTCAGTACCAAACCTTCGTCCTCCCAGATTaGCCTCAGGTCCTGACTGAC | + |
|
Preference number: 5 (lower is better) Translates to: YAPASVIQVPKITGQYQTFVLPD*PQVLTD Trigger: GTCAGTCAGGACCTGAGGCAAATCTGGGAGGACGAA...GGTTTGGTACTGACCTGTAATTTTAGGTACTTGGATGACTGAGGCAGGAGCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028661.6 |
||
| CDS-3UTR CAA 90 bp | ACTCTGGCAAGACACCTCACAAGGGCTTCATTTCCTCATAAGCCCTGGTGCTGGTCTCCAAGGCATCAATaGATATATAGCCTGTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: TLARHLTRASFPHKPWCWSPRHQ*IYSLSP Trigger: TGGTGACAGGCTATATATCAATTGATGCCTTGGAGA...CCAGCACCAGGGCTTATGAGGAAATGAAGCCCTTGTGAGGTGTCTTGCCAGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028661.6 |
||
| CDS-3UTR CAA 90 bp | ACAGAGGCTCCAGCATGGCCATACAGGAAAACCAGCTTGGAAAATCAGGAAAGTTCTTCGTATTTCTTTTaGCAGACATGCAGGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TEAPAWPYRKTSLENQESSSYFF*QTCRRK Trigger: CTTCCTCCTGCATGTCTGCAAAAAGAAATACGAAGA...ACTTTCCTGATTTTCCAAGCTGGTTTTCCTGTATGGCCATGCTGGAGCCTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028661.6 |
||
| CDS-3UTR CAA 90 bp | ACAGAGGCTCCAGCATGGCCATACAGGAAAACCAGCTTGGAAAATCAGGAAAGTTTGGACAGTTCTTGTTaGTGTTCTGGTGTTGGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: TEAPAWPYRKTSLENQESLDSSC*CSGVGL Trigger: TAGACCAACACCAGAACACAAACAAGAACTGTCCAA...ACTTTCCTGATTTTCCAAGCTGGTTTTCCTGTATGGCCATGCTGGAGCCTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028661.6 |
||
| CDS-3UTR CAA 90 bp | ACAGAGGCTCCAGCATGGCCATACAGGAAAACCAGCTTGGAAAATCAGGAAAGTACTTTTGGACAGTTCTaGTTTGTGTTCTGGTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: TEAPAWPYRKTSLENQESTFGQF*FVFWCW Trigger: CCAACACCAGAACACAAACAAGAACTGTCCAAAAGT...ACTTTCCTGATTTTCCAAGCTGGTTTTCCTGTATGGCCATGCTGGAGCCTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028661.6 |
||
| CDS GCA 90 bp | GCACATCTGCTTCTCTATAACCGGAGTCCTTGTGAGATGATGCTCTaGACTTTTGGACAGTTCTTGTTTGTGTTCTGGTGTTGGTCTAAT | + |
|
Preference number: 5 (lower is better) Translates to: AHLLLYNRSPCEMML*TFGQFLFVFWCWSN Trigger: ATTAGACCAACACCAGAACACAAACAAGAACTGTCCAAAAGTGCAGAGCATCATCTCACAAGGACTCCGGTTATAGAGAAGCAGATGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028661.6 |
||
| CDS TCA 90 bp | TTCTTGTTTGTGTTCTGGTGTTGGTCTAATGTTCTCCTTATCACTTaGTGCCATTCTGTCATGCTTTTCTATCTGAAATTTTTCATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FLFVFWCWSNVLLIT*CHSVMLFYLKFFIL Trigger: CAAGATGAAAAATTTCAGATAGAAAAGCATGACAGAATGGCATCAAGTGATAAGGAGAACATTAGACCAACACCAGAACACAAACAAGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028661.6 |
||
| CDS TCA 72 bp | CGCCTTCGTCCTCCCAGATTTGCCTCAGGTCCTGACTaGCACTGCCGCAGAACCAACCACGCTGCCCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: RLRPPRFASGPD*HCRRTNHAAPG Trigger: TCCAGGGGCAGCGTGGTTGGTTCTGCGGCAGTGTCAGTCAGGACCTGAGGCAAATCTGGGAGGACGAAGGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028661.6 |
||
| CDS TCA 72 bp | CACATCTGCTTCTCTATAACCGGAGTCCTTGTGAGATaGTGCTCTGCACTTTTGGACAGTTCTTGTTTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: HICFSITGVLVR*CSALLDSSCLC Trigger: ACACAAACAAGAACTGTCCAAAAGTGCAGAGCATCATCTCACAAGGACTCCGGTTATAGAGAAGCAGATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028661.6 |
||
| CDS GCA 72 bp | CTTCTCTATAACCGGAGTCCTTGTGAGATGATGCTCTaGACTTTTGGACAGTTCTTGTTTGTGTTCTGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: LLYNRSPCEMML*TFGQFLFVFWC Trigger: ACACCAGAACACAAACAAGAACTGTCCAAAAGTGCAGAGCATCATCTCACAAGGACTCCGGTTATAGAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028661.6 |
||